prot_P-littoralis_Contig7.93.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig7.93.2
Unique Nameprot_P-littoralis_Contig7.93.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1606
Homology
BLAST of mRNA_P-littoralis_Contig7.93.2 vs. uniprot
Match: A0A6H5L4X5_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X5_9PHAE)

HSP 1 Score: 799 bits (2063), Expect = 8.580e-260
Identity = 738/1663 (44.38%), Postives = 867/1663 (52.13%), Query Frame = 0
Query:    1 MTNHGKQFRAPSPKK-ARRKRTPRCNSCRRRDGDVAGGEDQAARVHLKLCARCRGVAYCGIKCQKADWKGHREVCVQYPISADLPAPSPLVNHQMLSGTGACPRNSRRKVIYGGAVGTVGATPRQREKAPTEHPFFGRQESMSEREARDAVGQPSSVNVFSAQKRQDXXXXXXXXXXXXXXXXXXXXXLRQEHL----ANDEDGCPSPPKMQRLNFPGGTNLSWQPLRSGNAD--------------------------------VTAASRARRSSSGGSSGVRSRGTVSSPPLPTGEESA--RSSAPVPVRRVSAPLYPVVLEKTKRWVAK----IANSRSQRGPPPPYASVAHRAKTIKKSPAATGSNPGGGSSASDAASLPQRSSPNRGIPPSARAPPPLPPRNHVRL-VGTASPPLVSLSTEQAAGTTTESEGRNTVPTPPVLAKDHPDGDSEDAAAGSSVGREXXXXXXXXXXXXXXXXXXXXXXXXXXTAAFWNGHSVPALPVLAIDTADSGDSAXXXXVERDDDALPTRPVLVKDSPEGLSQDSEAGSTVVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFPNDPVXXXXXXXXXXXXXXXXXXXXXXXXXLWDRHTTPTRXXXXXXXXXXXXXXXXXXXTAVLSDDRLVXXXXXXXXXXXXXXXXXXXXXXXAAQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAGPPAELRDIAGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAGQEKSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAVVPMRFPMEPPPPIMPPSAVSNVAASGLAREMKGGVFDSCPPPAG--PNKSSYDRSLSVGAAPQFHSVPLAVVTKGIAAGALA-WNGERKTSPRPRPPHSPGPAALSQSSSQCS----QKQSAVAESEDKGSKKTPPGSVAATFG---RRMTSASPPSRTPSWRSLSSESGRAS-----ARPETVHLRSPPFVPAVELSPQGKTSLSSAPPGRRPTETAVFYRKRSGA---PAGDVAGLPPSSETYLGRPEGFSAHVLVASAPTAADLAPSRKESSPGVTGGEDGCPMLYYSFDDRGRVAESLQPGDVVLVTPGRYEARAWGLQRLTSSVEIIGAGNAGDCVLYNKPAASHSGSPEGEHYLVGVMGGALGTGVGDEESVPEVRGKDDI--DDDSDSGFEDGAFGVMAGSIGSFTQKPVRVRLANLTLEQGAGYRGAVYQLGGESHLEVDGCTILCSQGGVNVDQGTCVICDSTISGSQGFGVHIGGEGTVEHCLIRRCGQGXXXXXXQEASSPTAGVCTEAEDDGTDVNRVRGMPAVSVLQSSRVRVRFNVIRENAGHSLQYRDAPLPGGDGKYAMLARRAEAEAEERLRSWLGSAAVLLREHLQEQHREGSIVSEGNRCELNKGCDVANCGATGREGMEGGAVGTTGCSAGXXXXXXXXXXXXXXXXXXXXXXEAETPKTTVSTVDGEVTLAGDDVREKSNKEKRPSSFGDSTRRGPDKGKGRQTCVPTAEEEGLPLPAAMTLRFLAAMDEGYIGSRREENARCQRRR 1599
            M+N GKQF+A SPKK +RRKRTPRC+SC +RDG+ AGGE Q  ++ LKLCARCR VAYCG++CQKA WK HREVC+ Y  +++LP  SP VNHQ +SGTG   R SRR V YGGAVG+VGATPRQRE APT HPFFGRQ S+ E + R  VG   S       +RQ   XXXXXXXXXXXXXXXXXXX          A++E+ CPSPP MQRL++PG    SWQ  +SG++                                    ASRARR +   + G R+ G++S  P P   E    R +   P+RR SAPLYP  LEKTKR  A+    +A   S+RGP                                              +  + R PPPLPPR  V L   TA P   SLS   A GT+T S        P  LA ++  G  + A    S                                    G  V A     ++      S      E + DAL             +++D E G   V                                                                                    XXXXXXXXX     +P                            D H  P                      A   D+ +V                         ++             XXXXXXXX                                        P E   +   P XXXXXXXXXXXXXXXXX              +GQE  A     XXXXXXXXXXXXXXXXXXXXXXXXX                           ASG+A     GVFDSCPP  G  P++    RSLSVG  PQF S+PL +  +  A+ A+A W  +R+ SPRPRPP SPGPAALSQ+S   S    +K SA +E +D+G ++T P S +AT G   R++ SA   SRT S  +LSS +  AS     A P T     PPFVP +ELSP+     S   PG R T+TA FY +R+GA   PAGDV  LPP+S+ Y GRP GFS HVLVASA +AADL    ++    + GG    P L YSF+DRGRVAE+L+PGDVVL+TPGRYEARAWGLQRL SSVEIIGAG+A DCVLYN PA S    P GEHYLVGVMGGALG+  G   SVPEV+GKD +  +DDSDSGFEDGA G     + SF+ + VRVRLANLTLEQG+GYRGAVYQLG ESHLE+DGCT++ S+GGVNVDQGTC+I DS ISGS+ FGVHIGGEG VEHC IR CG+G XXXXX                  TDVNRV  MPA+S+LQSSRVRVRFNVIR+NAGH+LQYRDAPLPGGDGKYA+LARRAEAEAEE+LRSWLGSAAVLLR+HLQ QHREGS+VSEGN+C LN+GCD+A C         GGA    G    XXXXXXXXXXXXXXXXXX    E   P+     +  EV+  G    E   +  R                G+QTCVPTAEEEGLPLP+AMTLRFLAAMDEGY+GSRREENAR ++RR
Sbjct:    1 MSNRGKQFKALSPKKVSRRKRTPRCDSCGKRDGEDAGGEGQP-KIRLKLCARCRAVAYCGMECQKAGWKVHREVCMHYASASELPPQSPSVNHQKVSGTGQ--RGSRRIVTYGGAVGSVGATPRQREHAPTRHPFFGRQNSI-ESDRRATVGNLQSSKALREGERQQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXQPASEEEPCPSPPTMQRLSYPG-RGRSWQGSKSGSSGGNDAKRPSPVGKSPSEKXXXXXXXXXXXXXXXXXXASRARRRTHNLTKGGRAYGSLSPTPAPPAAEEVKRRRAGSGPIRRESAPLYPAALEKTKRLAARKDASLAADVSRRGPXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXTANVRQTTRIPPPLPPRPSVSLDANTAFPRGSSLSPGLAGGTSTGS--------PQQLAPENKAGGDQPAGEHESTA----------------------------------GKGVKAPRESQLENEKPQVSRFGGGGEGEIDALE------------VAKDGEGGGVQVA------------------------------------------------------------------------------REGEEXXXXXXXXXXXXXXEPTPESRAGDDARAR---------------DTHGAPEWVVPPPVAKDRSQDSAAGSPRAREDDNEVVPVQPVLTTGPAHEVSQDLAAGSVLGREGDAALAKDSAAGSXXXXXXXXPR--------------------------------------PREDNLVPSRPAXXXXXXXXXXXXXXXXXM-------------SGQEGDAAVVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXASGVADT---GVFDSCPPSTGASPSEPGSQRSLSVGTVPQFLSMPLMLAAREKASAAVAAWQKDRRNSPRPRPPVSPGPAALSQASPLKSAFRFRKPSAASEHDDEGPERTLPSSASATLGGGARKILSAPLLSRTLS--ALSSAASHASHGLAKASPTTR----PPFVPTIELSPRASLPASPHAPGPRITDTAKFYLERAGAAPAPAGDVGLLPPASKAYFGRPSGFSVHVLVASALSAADLGDRHQQH---LEGGGSHSPRLCYSFEDRGRVAEALRPGDVVLLTPGRYEARAWGLQRLVSSVEIIGAGDAADCVLYNDPACS---GPAGEHYLVGVMGGALGSAAGGGASVPEVKGKDVVADEDDSDSGFEDGALGPANSLVHSFSSRAVRVRLANLTLEQGSGYRGAVYQLGRESHLEMDGCTVVGSKGGVNVDQGTCIIRDSWISGSEVFGVHIGGEGAVEHCSIRGCGRGGXXXXXXXXXXXXXXXXXXXXXXXTDVNRVGSMPAISILQSSRVRVRFNVIRDNAGHTLQYRDAPLPGGDGKYALLARRAEAEAEEKLRSWLGSAAVLLRDHLQGQHREGSVVSEGNQCHLNRGCDLARCSG-------GGAAEEIGVXX-XXXXXXXXXXXXXXXXXXAGEGEGLEPEVGGQEICEEVSRDGPGEGETRTRTLR----------------GQQTCVPTAEEEGLPLPSAMTLRFLAAMDEGYVGSRREENARLKKRR 1413          
BLAST of mRNA_P-littoralis_Contig7.93.2 vs. uniprot
Match: D7FI04_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI04_ECTSI)

HSP 1 Score: 753 bits (1944), Expect = 3.310e-242
Identity = 712/1692 (42.08%), Postives = 841/1692 (49.70%), Query Frame = 0
Query:    1 MTNHGKQFRAPSPKK-ARRKRTPRCNSCRRRDGDVAGGEDQAARVHLKLCARCRGVAYCGIKCQKADWKGHREVCVQYPISADLPAPSPLVNHQMLSGTGACPRNSRRKVIYGGAVGTVGATPRQREKAPTEHPFFGRQESMSEREARDAVGQPSSVNVFSAQKRQDXXXXXXXXXXXXXXXXXXXXXLRQEHLANDEDGCPSPPKMQRLNFPGGTNLSWQPLRSGNADVTAASRARRSSSGGSSGVRSRGTVS-SPPLPTGEE-SARSSAPVPVRRVSAPLYPVVLEKTKRWVAK----IANSRSQRGPPPPYASVAHRAKTIKKSPAATGSNPGGGSSASDAASLPQRSSPNRGIPPSARAPPPLPPRNHVRL-VGTASPPLVSLSTEQAAGTTTESEGRNTVPTPPVLAK------DHPDGDSEDAAA-GSSVGREXXXXXXXXXXXXXXXXXXXXXXXXXXT--------------------------------------AAFWNGHSVPALPVLAIDTAD-SGDSAXXXXVERDDD--ALPTRPVLVKDSPEGLSQDSEAGSTVVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFPNDPVXXXXXXXXXXXXXXXXXXXXXXXXXLWDRHTTPTRXXXXXXXXXXXXXXXXXXXTAVLSDDRLVXXXXXXXXXXXXXXXXXXXXXXXAAQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAGPPAELRDIAGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAGQEKSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAVVPMRFPMEPPPPIMPPSAVSNVAASGLAREMKGGVFDSCPPPAG--PNKSSYDRSLSVGAAPQFHSVPLAVVTKGIAAGALA-WNGERKTSPRPRPPHSPGPAALSQSSSQCS----QKQSAVAESEDKGSKKTPPGSVAATFGR---RMTSASPPSRTPSWRSLSSESGRAS---ARPETVHLRSPPFVPAVELSPQGKTSLSSAPPGRRPTETAVFYRKRSGA---PAGDVAGLPPSSETYLGRPEGFSAHVLVASAPTAADLAPSRKESSPGVTGGEDGCPMLYYSFDDRGRVAESLQPGDVVLVTPGRYEARAWGLQRLTSSVEIIGAGNAGDCVLYNKPAASHSGSPEGEHYLVGVMGGALGTGVGDEESVPEVRGKDDI--DDDSDSGFEDGAFGVMAGSIGSFTQKPVRVRLANLTLEQGAGYRGAVYQLGGESHLEVDGCTILCSQGGVNVDQGTCVICDSTISGSQGFGVHIGGEGTVEHCLIRRCGQGXXXXXX-----QEASSPTAGVCTEAEDD-------GTDVNRVRGMPAVSVLQSSRVRVRFNVIRENAGHSLQYRDAPLPGGDGKYAMLARRAEAEAEERLRSWLGSAAVLLREHLQEQHREGSIVSEGNRCELNKGCDVANCGATGREGMEGGAVGTTGCSAGXXXXXXXXXXXXXXXXXXXXXXEAETPKTTVSTVDG-EVTLAGDDVREKSNKEKRPSSFGDSTRRGPDKGKGRQTCVPTAEEEGLPLPAAMTLRFLAAMDEGYIGSRREENARCQRRRNEKRAG 1605
            M+N GKQF+A SPKK +RRKRTPRC+SC +RDG+ AGGE Q  ++ LKLCARCR VAYCG++CQKA WK HREVCV Y  +A+LP+ SPLVNHQ +SGTG   R S R+   G   G +G    +R                           PS V    ++K+Q XXXXXXXXXXXXXXXXXX                                                  ARR +   + G R+ G++S +PP P  EE   R S   PVRR SAPLYP VLEKTKR  A+    +    S+RGP                                              +  + R PPPLPPR  V L   TA P   SLS   A GT+T S        P  LA       D P G+ E  A  G    RE                                                                 A   +    P   V +    D S DSA      R+DD   +P +P L K S   +SQD  AGS +                 XXXXXXX        V+                                                            A   ND                            W R +                            D  +V                        +++         XXXXXXXXXXXX                                    +   PA  +  AG                                S +GQE  A   XXXXXXXXXXXXXXXXXXXXXXXXXXX      +  PMEPPPPI      S   AS LA     GVFDSCPP  G  P++    RSLSVG  PQF S+PL +  +  A+ A+A W  +R+ SPRPRPP SPGPAALSQSS   S    +K SA  E +D+G + TPP   AAT G    R  SA P SRT  + +LSS +  AS   A         PPFVP +ELSP+     S   PG R T+TA FYR+R+ A   PAGD+  LPP+S+ Y GRP GFS HVLVASA +AADL   +++    + GG +  P LYYSF+DRGRVAE+L+PGDVVLVTPGRYEARAWGLQRL SSVEIIGAG+AGDCVLYN   +S    P+GEHYLVGVMGGALG+      SVPEV+GKD +  DDDSDSGFEDGA G     + SF+ + VRVRLANLTLEQG+GYRG VYQLG ESHLE+DGCT+  S+GGVN+DQGTC+ICDS ISGS+ FGVHIGGEG VEHC IR CG+G   XXX     +  SS T  VC   ++        GTDVNRV  MPA+S+LQSSRVRVRFNVIR+NAGH+LQYRDAPLPGGDGKYA+LARRAEAEAEE+LRSWLGSA+VLLREHLQ QHREGS+VSEGN+C LN+GCD+A C         GGA    G +A              XXXXXXXXX     ++T    +G E  + G ++ E+ +   R    G  TR G  +  G+QTCVPTAEEEGLPLPAAMTLRFLAAMDEGY+GSRREENAR ++R+ E  AG
Sbjct:    1 MSNRGKQFKALSPKKVSRRKRTPRCDSCGKRDGEDAGGEGQP-KIRLKLCARCRAVAYCGMECQKAGWKVHREVCVHYASAAELPSQSPLVNHQKVSGTGQ--RGSSRQ---GSKSGNIGGNDAKR---------------------------PSPVGKSPSEKQQPXXXXXXXXXXXXXXXXXX--------------------------------------------------ARRRTHNLTKGGRAYGSLSPTPPPPDAEEVKRRRSGSGPVRRESAPLYPAVLEKTKRLAARKDASLTADASRRGPXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXTADVRQTTRIPPPLPPRPSVSLDANTAFPRGSSLSPGLAGGTSTGS--------PQQLAPENKAGGDQPAGEHESTAGKGVEAPRESQLENEKPQVSRSGGGGEAEIDALEVPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAGDDAQARDARGAPEWVVPSPVAKDRSQDSAAGSPRAREDDNGVVPVQPALTKGSAHEVSQDLAAGSVLGREGDPALAKDSAAGSSXXXXXXXPRAGEDSSVVT-------------------------------VQPALTKGSEHDLSKDSASVSVSDRDGDADLANDSAAG------------------------WSRDSAAGSPRPRE------------------EDSSVVPVQPALTKGSEHETSQDSAAGSVLSREGGTAAAGSSXXXXXXXXXXXXDNV---------------------------------VPARPAMAKGSAG-----------------------TVSQDSAAGSMSGQEGDAAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVPLPMEPPPPIQ---TSSKTGASSLADT---GVFDSCPPSTGASPSEPGSQRSLSVGTVPQFLSMPLVLAAREKASAAVAAWQKDRRNSPRPRPPVSPGPAALSQSSPLKSAFRFRKPSAAVEHDDEGPEITPPS--AATLGGGSGRKLSAPPLSRT--FSALSSAASHASPGSASRSASRTTRPPFVPTIELSPRASLPASPHAPGPRITDTAKFYRERANAAPAPAGDIGLLPPASKAYFGRPSGFSVHVLVASALSAADLGDRQQQH---LEGGGNNSPRLYYSFEDRGRVAEALRPGDVVLVTPGRYEARAWGLQRLVSSVEIIGAGDAGDCVLYNDRVSS---GPDGEHYLVGVMGGALGSAGAGGASVPEVKGKDVVADDDDSDSGFEDGALGPANSLVHSFSSRAVRVRLANLTLEQGSGYRGTVYQLGRESHLEMDGCTVAGSKGGVNIDQGTCIICDSWISGSEVFGVHIGGEGAVEHCSIRGCGRGGRGXXXXXXXGKYLSSST--VCNAGDEXXXXXXXXGTDVNRVGSMPAISILQSSRVRVRFNVIRDNAGHTLQYRDAPLPGGDGKYALLARRAEAEAEEKLRSWLGSASVLLREHLQGQHREGSVVSEGNQCHLNRGCDLARCSG-------GGAAEEIGAAA-------------RXXXXXXXXXXXXXAESTAGEGEGLEPEVGGQEIGEEVS---RDGPGGGETRTGTLR--GQQTCVPTAEEEGLPLPAAMTLRFLAAMDEGYVGSRREENARLKKRKKEGGAG 1424          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.93.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4X5_9PHAE8.580e-26044.38MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FI04_ECTSI3.310e-24242.08MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 24..74
e-value: 1.0E-8
score: 35.1
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 24..74
score: 11.32612
NoneNo IPR availableGENE3D6.10.140.2220coord: 8..77
e-value: 1.9E-10
score: 42.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 774..868
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1522..1552
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1581..1605
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 787..851
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 650..670
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..396
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 988..1014
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1584..1605
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 950..968
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..455
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 649..673
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 932..1051
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1490..1565
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 884..909
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 22..77
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 1271..1394
e-value: 2.0E-7
score: 31.0
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 1133..1335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:447373..459022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.93.2mRNA_P-littoralis_Contig7.93.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig7 447066..460914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig7.93.2 ID=prot_P-littoralis_Contig7.93.2|Name=mRNA_P-littoralis_Contig7.93.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1606bp
MTNHGKQFRAPSPKKARRKRTPRCNSCRRRDGDVAGGEDQAARVHLKLCA
RCRGVAYCGIKCQKADWKGHREVCVQYPISADLPAPSPLVNHQMLSGTGA
CPRNSRRKVIYGGAVGTVGATPRQREKAPTEHPFFGRQESMSEREARDAV
GQPSSVNVFSAQKRQDQQQQQQGTLTEWRRQQQQQQQLRQEHLANDEDGC
PSPPKMQRLNFPGGTNLSWQPLRSGNADVTAASRARRSSSGGSSGVRSRG
TVSSPPLPTGEESARSSAPVPVRRVSAPLYPVVLEKTKRWVAKIANSRSQ
RGPPPPYASVAHRAKTIKKSPAATGSNPGGGSSASDAASLPQRSSPNRGI
PPSARAPPPLPPRNHVRLVGTASPPLVSLSTEQAAGTTTESEGRNTVPTP
PVLAKDHPDGDSEDAAAGSSVGREDHAIPTRPVLAKDSPDDLSQDSAAGS
TAAFWNGHSVPALPVLAIDTADSGDSAGSTAVERDDDALPTRPVLVKDSP
EGLSQDSEAGSTVVVVWDDHTVRTPPVPVKDSLEYLPQDFAAGSTVLRDD
HTVPTPPVPVKDSLDFLSQDSAAGSTVLRDDHTIPTPPVLASGSAGALSQ
DSAAGSTAIFPNDPVVSTPPVLVKDSADSLSQDSAAGSIALWDRHTTPTR
PVLVNDSPDGSSQDSAAGSTAVLSDDRLVPTRLALVNGFAEALSQDSAAG
STAAQDDRMLSAQPLLVKGSSDGLSQDSAAGSAVLRDNQTVPNPPVLAKD
FADGFSDDSVAGFLAGPPAELRDIAGPPAGLRDNSSVPTRAVLTNGSADA
LSEDSGAGSTAGQEKSAVQVRPTLTNGPVKDVSQDSAAGSAAEQESNTTA
VVPMRFPMEPPPPIMPPSAVSNVAASGLAREMKGGVFDSCPPPAGPNKSS
YDRSLSVGAAPQFHSVPLAVVTKGIAAGALAWNGERKTSPRPRPPHSPGP
AALSQSSSQCSQKQSAVAESEDKGSKKTPPGSVAATFGRRMTSASPPSRT
PSWRSLSSESGRASARPETVHLRSPPFVPAVELSPQGKTSLSSAPPGRRP
TETAVFYRKRSGAPAGDVAGLPPSSETYLGRPEGFSAHVLVASAPTAADL
APSRKESSPGVTGGEDGCPMLYYSFDDRGRVAESLQPGDVVLVTPGRYEA
RAWGLQRLTSSVEIIGAGNAGDCVLYNKPAASHSGSPEGEHYLVGVMGGA
LGTGVGDEESVPEVRGKDDIDDDSDSGFEDGAFGVMAGSIGSFTQKPVRV
RLANLTLEQGAGYRGAVYQLGGESHLEVDGCTILCSQGGVNVDQGTCVIC
DSTISGSQGFGVHIGGEGTVEHCLIRRCGQGGGGGGGQEASSPTAGVCTE
AEDDGTDVNRVRGMPAVSVLQSSRVRVRFNVIRENAGHSLQYRDAPLPGG
DGKYAMLARRAEAEAEERLRSWLGSAAVLLREHLQEQHREGSIVSEGNRC
ELNKGCDVANCGATGREGMEGGAVGTTGCSAGGGGRGGGGGDGGGGGGAN
ANDAEAETPKTTVSTVDGEVTLAGDDVREKSNKEKRPSSFGDSTRRGPDK
GKGRQTCVPTAEEEGLPLPAAMTLRFLAAMDEGYIGSRREENARCQRRRN
EKRAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence