prot_P-littoralis_Contig1177.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1177.7.1
Unique Nameprot_P-littoralis_Contig1177.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length106
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1177.7.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 5.450e-13
Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0 
Query:    1 KKNPNRTTTCGNQQGFLVSQLDIQGVLDRQKEREGNGDNGSYVLARTIRSNLQYV 55
            K +P+R TTCG QQ  +++ + IQ VLDRQKER+  GDN SYVLART+R  LQY+
Sbjct:  123 KSDPDRITTCGRQQAHIIAGVSIQHVLDRQKERDSQGDNVSYVLARTVRRILQYL 177
[Close]
BLAST of mRNA_P-littoralis_Contig1177.7.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.010e-7
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:   13 QQGFLVSQLDIQGVLDRQKEREGNGDNGSYVLARTIRSNLQYV 55
            QQ  +++ + IQ VLDRQK R+  GDN  YVLART+RSNLQY+
Sbjct:  102 QQAHIIAGVSIQHVLDRQKARDSEGDNVPYVLARTVRSNLQYL 144
[Close]
BLAST of mRNA_P-littoralis_Contig1177.7.1 vs. uniprot
Match: A0A6H5K9U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U2_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 2.670e-5
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0 
Query:    1 KKNPNRTTTCGNQQGFLVSQLDIQGVLDRQKEREGNGDNGSYVLARTIRS 50
            K +P+R TTCG QQ  +++ + IQ       ER+  GDN SYVLART+RS
Sbjct:  119 KSDPDRITTCGRQQAHIIAGVSIQ-------ERDSQGDNVSYVLARTVRS 161
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1177.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE5.450e-1360.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ5_ECTSI1.010e-760.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9U2_9PHAE2.670e-550.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1177contigP-littoralis_Contig1177:47126..48179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1177.7.1mRNA_P-littoralis_Contig1177.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1177 47126..48181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1177.7.1 ID=prot_P-littoralis_Contig1177.7.1|Name=mRNA_P-littoralis_Contig1177.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=106bp
KKNPNRTTTCGNQQGFLVSQLDIQGVLDRQKEREGNGDNGSYVLARTIRS
NLQYVFVYCVCSRVFWLRDRFGVPRKGIYEVAYVQEDDTRSHPRFENTDG
CHSPSC
back to top