mRNA_P-littoralis_Contig7.41.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig7.41.1 vs. uniprot
Match: D7FHZ4_ECTSI (PPC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ4_ECTSI) HSP 1 Score: 202 bits (513), Expect = 1.460e-57 Identity = 119/189 (62.96%), Postives = 131/189 (69.31%), Query Frame = 2
Query: 515 SHMVCYAIRLQPGEELKGALAAFTSDNDIRAGFILSCVGSVRDLSLRLAGAERPSAPSPSATTT-----------AALDAPTA----------------------EEQQPMLHAGPDARFELLSLVGTLSPDGAHLHASLGDEEGAVCGGHLVRATVHTTAEIIIGVATSLTFSREMDPGTGFKELVVS 982
S MVCYAIRL PGEELKG LA FTS IRAGFI+SCVGSVRD+SLRLAGAE + SPS+ A + TA EE+QPML GPDARFE+ SLVGTLSP+G HLHASL DE+GA+CGGHLVRATVHTTAEI+IGVA+SL FSREMDP TGFKELVVS
Sbjct: 24 SSMVCYAIRLPPGEELKGVLAEFTSHKKIRAGFIVSCVGSVRDVSLRLAGAEPLAGCSPSSXXXXXXXXXXXXXXAPQENFTAGSHXXXXXXXXQLQEYHQHRREEEEQPMLRTGPDARFEICSLVGTLSPEGLHLHASLADEKGALCGGHLVRATVHTTAEIVIGVASSLEFSREMDPRTGFKELVVS 212
BLAST of mRNA_P-littoralis_Contig7.41.1 vs. uniprot
Match: UPI0019954515 (DNA-binding protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=UPI0019954515) HSP 1 Score: 123 bits (308), Expect = 1.220e-29 Identity = 71/157 (45.22%), Postives = 94/157 (59.87%), Query Frame = 2
Query: 521 MVCYAIRLQPGEELKGALAAFTSDNDIRAGFILSCVGSVRDLSLRLAGAERPSAPSPSATTTAALDAPTAEEQQPMLHAGPDARFELLSLVGTLSPDGAHLHASLGDEEGAVCGGHLVRAT-VHTTAEIIIGVATSLTFSREMDPGTGFKELVVSAR 988
M +A+RL PG++LK L AF ++AGFI++CVGS+R ++LR A Q+P+L D +FE++SLVGTLSPDG+HLH SL D GA GGHL+ ++TTAEI+IG A L F RE+DP T FKEL + R
Sbjct: 1 MTVHALRLHPGQDLKRELDAFAKAQHLQAGFIVTCVGSLRKVALR-----------------------PANLQEPLLR---DQKFEIVSLVGTLSPDGSHLHISLSDSTGATIGGHLLEGNEIYTTAEIVIGEAEHLQFHREIDPVTTFKELTIKKR 131
BLAST of mRNA_P-littoralis_Contig7.41.1 vs. uniprot
Match: A0A8J2SKC7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKC7_9STRA) HSP 1 Score: 123 bits (309), Expect = 2.080e-29 Identity = 69/153 (45.10%), Postives = 93/153 (60.78%), Query Frame = 2
Query: 530 YAIRLQPGEELKGALAAFTSDNDIRAGFILSCVGSVRDLSLRLAGAERPSAPSPSATTTAALDAPTAEEQQPMLHAGPDARFELLSLVGTLSPDGAHLHASLGDEEGAVCGGHLVRATVHTTAEIIIGVATSLTFSREMDPGTGFKELVVSAR 988
+A+RL PG+EL G+L + SDN + A +I +CVGS++ +LRLA A+R D P + D RFE++S+VGT+S +GAH+H L D GA GGHL+ ATV TTAEI++G +TF R+ D TGFKELVV R
Sbjct: 3 HALRLHPGDELMGSLKQYCSDNKLAAAYIATCVGSLKAATLRLANADR--------------DRPNEIKTY-------DQRFEIVSVVGTISCEGAHIHLGLADATGASIGGHLISATVFTTAEIVLGEVPCITFDRQFDDATGFKELVVVRR 134
BLAST of mRNA_P-littoralis_Contig7.41.1 vs. uniprot
Match: A0A4U5ULS1_COLLU (PPC domain-containing protein n=4 Tax=Sciaenidae TaxID=30870 RepID=A0A4U5ULS1_COLLU) HSP 1 Score: 120 bits (300), Expect = 2.720e-28 Identity = 77/164 (46.95%), Postives = 97/164 (59.15%), Query Frame = 2
Query: 500 SATPTSHMVCYAIRLQPGEELKGALAAFTSDNDIRAGFILSCVGSVRDLSLRLAGAERPSAPSPSATTTAALDAPTAEEQQPMLHAGPDARFELLSLVGTLSPDGAHLHASLGDEEGAVCGGHLVRAT-VHTTAEIIIGVATSLTFSREMDPGTGFKELVVSAR 988
SA S + +AIR+ PG+EL G+L AF + +RA FI++CVGSV +LRLA A TA ++H D RFE++SLVGTL+PD AHLH SL D EG GGH++ V TTAE++IG A L F+REMD TGF ELVV R
Sbjct: 3 SAGAGSSLQVHAIRVGPGQELLGSLQAFVEERHLRAPFIITCVGSVTKATLRLANA-------------------TATNTNEVIHL--DGRFEIVSLVGTLNPD-AHLHISLSDVEGKTIGGHVLGGLEVFTTAEVVIGEAVHLKFTREMDVRTGFPELVVRPR 144
BLAST of mRNA_P-littoralis_Contig7.41.1 vs. uniprot
Match: A0A6P8IX52_ACTTE (uncharacterized protein LOC116305845 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IX52_ACTTE) HSP 1 Score: 120 bits (300), Expect = 2.880e-28 Identity = 76/165 (46.06%), Postives = 103/165 (62.42%), Query Frame = 2
Query: 488 ALQPSATPTSHMVCYAIRLQPGEELKGALAAFTSDNDIRAGFILSCVGSVRDLSLRLAGAERPSAPSPSATTTAALDAPTAEEQQPMLHAGPDARFELLSLVGTLSPDGAHLHASLGDEEGAVCGGHLV-RATVHTTAEIIIGVATSLTFSREMDPGTGFKELVV 979
++QP +P + CYA+RL+PG+ + L F DN+++A F+LSCVGSV +LR+A A +ATT + LH D R+E++SLVGTLS +G HLHASL D++G V GGH++ V TTAEIIIG + L F+R+MD TGF ELVV
Sbjct: 7 SVQPGPSP---LTCYALRLKPGDNITDMLIKFVEDNNLKAAFVLSCVGSVTSATLRMANA--------TATTPNTIKE---------LH---DNRYEIVSLVGTLSANG-HLHASLSDKDGNVIGGHVMGNMIVFTTAEIIIGECSWLVFNRQMDAETGFPELVV 147
BLAST of mRNA_P-littoralis_Contig7.41.1 vs. uniprot
Match: A0A0F8CNP4_LARCR (PPC domain-containing protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A0F8CNP4_LARCR) HSP 1 Score: 122 bits (305), Expect = 3.330e-28 Identity = 81/177 (45.76%), Postives = 102/177 (57.63%), Query Frame = 2
Query: 482 DVALQPSATPTSH-------MVCYAIRLQPGEELKGALAAFTSDNDIRAGFILSCVGSVRDLSLRLAGAERPSAPSPSATTTAALDAPTAEEQQPMLHAGPDARFELLSLVGTLSPDGAHLHASLGDEEGAVCGGHLVRAT-VHTTAEIIIGVATSLTFSREMDPGTGFKELVVSAR 988
DV+L A T H + +AIR+ PG+EL G+L AF + +RA FI++CVGSV +LRLA A TA ++H D RFE++SLVGTL+PD AHLH SL D EG GGH++ V TTAE++IG A L F+REMD TGF ELVV AR
Sbjct: 55 DVSLIAIAVATGHSSAGGSSLQVHAIRVGPGQELLGSLQAFVEERRLRAPFIITCVGSVTKATLRLANA-------------------TATNTNEVIHL--DGRFEIVSLVGTLNPD-AHLHISLSDIEGKTTGGHVLGGLEVFTTAEVVIGEAVDLKFTREMDGRTGFPELVVQAR 209
BLAST of mRNA_P-littoralis_Contig7.41.1 vs. uniprot
Match: A0A327NZT9_9BACT (DNA-binding protein n=1 Tax=Spirosoma telluris TaxID=2183553 RepID=A0A327NZT9_9BACT) HSP 1 Score: 119 bits (297), Expect = 4.460e-28 Identity = 68/154 (44.16%), Postives = 93/154 (60.39%), Query Frame = 2
Query: 521 MVCYAIRLQPGEELKGALAAFTSDNDIRAGFILSCVGSVRDLSLRLAGAERPSAPSPSATTTAALDAPTAEEQQPMLHAGPDARFELLSLVGTLSPDGAHLHASLGDEEGAVCGGHLVRA-TVHTTAEIIIGVATSLTFSREMDPGTGFKELVV 979
M Y+ RL+PG++LK L AF I AG +L+CVGS+ D+SLRLA E PS M H FE++SLVGTLS +G+H+H S+ D G GGHL+ TV+TTAE+++GV T +T++RE+DP G++ELVV
Sbjct: 1 MQTYSFRLRPGQDLKKELDAFVRQERIGAGALLTCVGSLTDVSLRLANQEEPS----------------------MWH----GHFEIVSLVGTLSTNGSHVHLSVSDSTGQTLGGHLMEGCTVYTTAELVVGVMTDITYAREVDPAFGYRELVV 128
BLAST of mRNA_P-littoralis_Contig7.41.1 vs. uniprot
Match: C3Z3T4_BRAFL (PPC domain-containing protein n=4 Tax=Branchiostoma TaxID=7737 RepID=C3Z3T4_BRAFL) HSP 1 Score: 119 bits (298), Expect = 4.870e-28 Identity = 70/159 (44.03%), Postives = 99/159 (62.26%), Query Frame = 2
Query: 515 SHMVCYAIRLQPGEELKGALAAFTSDNDIRAGFILSCVGSVRDLSLRLAGAERPSAPSPSATTTAALDAPTAEEQQPMLHAGPDARFELLSLVGTLSPDGAHLHASLGDEEGAVCGGHLV-RATVHTTAEIIIGVATSLTFSREMDPGTGFKELVVSAR 988
S ++C+ +RL PGEE+K AL F + ++A F+++CVGSV LRLA A TAE+ ++ D ++E++SLVGTL+ + HLH SL D++GAV GGH++ TV TTAEI+IG ++LT+ REMD TGF ELVV+ R
Sbjct: 3 SPLLCFTLRLGPGEEIKSALQKFVEEKRLKAPFVMTCVGSVSSAKLRLANA-------------------TAEKPNEVIEL--DQKYEIVSLVGTLN-NSCHLHISLADKDGAVIGGHVMGNLTVFTTAEIVIGECSNLTYRREMDDRTGFPELVVNKR 139
BLAST of mRNA_P-littoralis_Contig7.41.1 vs. uniprot
Match: A0A8C4FAV6_DICLA (PPC domain-containing protein n=3 Tax=Moronidae TaxID=42148 RepID=A0A8C4FAV6_DICLA) HSP 1 Score: 119 bits (298), Expect = 8.890e-28 Identity = 75/164 (45.73%), Postives = 96/164 (58.54%), Query Frame = 2
Query: 500 SATPTSHMVCYAIRLQPGEELKGALAAFTSDNDIRAGFILSCVGSVRDLSLRLAGAERPSAPSPSATTTAALDAPTAEEQQPMLHAGPDARFELLSLVGTLSPDGAHLHASLGDEEGAVCGGHLVR-ATVHTTAEIIIGVATSLTFSREMDPGTGFKELVVSAR 988
SA S + +A+R PG+EL G+L AF ++ +RA FI++CVGSV +LRLA A TA M+H RFE++SLVGTL+PD AHLH L D EG GGH++ V TTAE+++G A L F+REMD GTGF ELVV R
Sbjct: 22 SAGGGSSLKVHAVRFGPGQELLGSLQAFVAERRLRAPFIITCVGSVTKATLRLANA-------------------TATNTNEMIHLS--GRFEIVSLVGTLNPD-AHLHICLSDFEGKTVGGHVMGDLEVFTTAEVVVGEAVDLQFTREMDDGTGFPELVVKPR 163
BLAST of mRNA_P-littoralis_Contig7.41.1 vs. uniprot
Match: UPI001390153E (bifunctional protein GlmU n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI001390153E) HSP 1 Score: 118 bits (296), Expect = 1.420e-27 Identity = 70/158 (44.30%), Postives = 95/158 (60.13%), Query Frame = 2
Query: 509 PTSHMVCYAIRLQPGEELKGALAAFTSDNDIRAGFILSCVGSVRDLSLRLAGAERPSAPSPSATTTAALDAPTAEEQQPMLHAGPDARFELLSLVGTLSPDGAHLHASLGDEEGAVCGGHLV-RATVHTTAEIIIGVATSLTFSREMDPGTGFKELVV 979
P+ + C+AIRL+PGEEL L F S+ND+ + F+L+CVGSVR ++RLA A S P+ + +FE+LSLVGT+S G HLH SLGD+EG V GGH++ + TTAE++IG + L F+RE D TGF ELV+
Sbjct: 20 PSGLLTCHAIRLKPGEELVSGLKRFVSENDLGSAFVLTCVGSVRSGTIRLANATVSSKGDPNEIMEL------------------NGQFEILSLVGTIS-GGGHLHVSLGDKEGQVIGGHVMGNMIIFTTAEVVIGNSQQLNFTREFDEETGFDELVI 158 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.41.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig7.41.1 >prot_P-littoralis_Contig7.41.1 ID=prot_P-littoralis_Contig7.41.1|Name=mRNA_P-littoralis_Contig7.41.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=271bp MSRPQGVRPEESPHHGGDSVVVVATTTTTTAEGPSATTGPPPSAAAPPPPback to top mRNA from alignment at P-littoralis_Contig7:186730..190053+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig7.41.1 ID=mRNA_P-littoralis_Contig7.41.1|Name=mRNA_P-littoralis_Contig7.41.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3324bp|location=Sequence derived from alignment at P-littoralis_Contig7:186730..190053+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig7:186730..190053+ >mRNA_P-littoralis_Contig7.41.1 ID=mRNA_P-littoralis_Contig7.41.1|Name=mRNA_P-littoralis_Contig7.41.1|organism=Pylaiella littoralis U1_48|type=CDS|length=813bp|location=Sequence derived from alignment at P-littoralis_Contig7:186730..190053+ (Pylaiella littoralis U1_48)back to top |