mRNA_P-littoralis_Contig699.17.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: D7FXE9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXE9_ECTSI) HSP 1 Score: 461 bits (1186), Expect = 8.460e-157 Identity = 234/286 (81.82%), Postives = 259/286 (90.56%), Query Frame = 2
Query: 41 MRVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSKAQRLAPAKP 898
MRV+VLLSPAKTLNWA +PASL+ +WSQPKLL+ AD V+E MR K+K DLKKLMS+SDNIADLNVERFK FL S++V + +A ++ A +ARPAAL +DGPAYRGMDAATFSEEDW FGA SVRLLSGLYGVLRPTDLIQPYRLEMGSRV VAG KDLYEYWKGDIAQC++ED++G+GSV+S TDEFLVVNVASQEYSKAVDF QLE AGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVV+RAKD+ADLE+FSAEGYRLDRSQ DGLLVFTRSKAQR AP KP
Sbjct: 1 MRVVVLLSPAKTLNWATSPASLAELWSQPKLLQAADPVVEVMRKKKKADLKKLMSISDNIADLNVERFKKFLGSSEVEKMSTAVDLVADVARPAALVFDGPAYRGMDAATFSEEDWAFGARSVRLLSGLYGVLRPTDLIQPYRLEMGSRVAVAGMKDLYEYWKGDIAQCILEDIQGEGSVKSGTDEFLVVNVASQEYSKAVDFDQLESAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVNRAKDIADLESFSAEGYRLDRSQCGDGLLVFTRSKAQRAAPTKP 286
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: A0A835YNT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNT5_9STRA) HSP 1 Score: 234 bits (597), Expect = 6.420e-69 Identity = 133/283 (47.00%), Postives = 185/283 (65.37%), Query Frame = 2
Query: 47 VLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKK-DLYEYWKGDIAQ--CLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSKAQRLA 886
V+VLLSPAKTL+W PAP L ++ P LL +D + + M+GK DLK L+SVS +A LN ER++ F S V+++ G RPAA AYDGPA+ G++A T S+ D G + + +LSGLYGV+ P DLIQPYRLEMG++V + G+K L ++W+GDI + C + + + + + + +VVN ASQEY++AVD L G +V+ C F DDGR +SV AKR RGL+ARH++ SRA V D++AFS EGY ++S+ LVF RSK RL+
Sbjct: 2 VVVLLSPAKTLSWEPAPPGLP--YAMPHLLPRSDTIAKLMKGKSVADLKSLLSVSPALATLNHERYQNFALSDSVADKK-------GELRPAAFAYDGPAFLGLEAETLSQSDLEHGQSVLCILSGLYGVVHPLDLIQPYRLEMGTKVELEGEKCALSDFWRGDITEHICQLLNEQQRSAGDKPPPPQIVVNAASQEYARAVDVKALRDTGVQVIDCTFHDDGRTVSVLAKRTRGLMARHIIQSRAASVDDIKAFSLEGYAFAEARSTPENLVFERSKEARLS 275
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: A0A7S3XVD7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVD7_HETAK) HSP 1 Score: 209 bits (533), Expect = 6.150e-59 Identity = 122/282 (43.26%), Postives = 172/282 (60.99%), Query Frame = 2
Query: 26 HLETTMRVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSK 871
H+ +L++LSPAK+L W A ++ + P L E+D V ++ K K DLKK+M +SD++A LN ER + +L S K +++ S + +A A+DGPAY+G+DA + + E+ + ++++L GLYGVLRP DL+Q YRLEMG+++ KDLY YW I L + + DE ++VN+ASQEY+K+V+ +LE G VV C+FKD GRVLSVFAKRARGL+AR R VA L+ F EGYR QS+ LVF R K
Sbjct: 2 HITVRATMLMILSPAKSLRWEKVTARVTP--TLPPFLTESDLVARALKSKTKNDLKKIMGISDSLAALNFERNQSYLLS-KEAKKKSYGDPELNMA---VFAFDGPAYKGLDAESLNAEEMQYLQENLKILCGLYGVLRPCDLMQQYRLEMGTKMNCGQSKDLYSYWTETITPYLSDQICNN------QDEKVIVNLASQEYAKSVNLKRLEEEGVTVVNCIFKDRGRVLSVFAKRARGLMARWCAQQRPASVAALQGFDLEGYRFAAGQSTPTDLVFARDK 271
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: A0A1V9YRA9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YRA9_9STRA) HSP 1 Score: 206 bits (525), Expect = 8.710e-59 Identity = 124/277 (44.77%), Postives = 172/277 (62.09%), Query Frame = 2
Query: 44 RVLVL-LSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSK 871
R+LV+ LSPAKTL+ A A + SQPK L EA +++ +R +T LK L+ VSD IA LN +RFK F+ +H+ A + A LA+DGPAY+G+ A +FS+E+ + +R+L GLYG+LRP DLIQPYRLEMG ++ KDLY +W +A L ++ + E +++NVASQEY K+VD L+ + VV C+FKDDG++ SV+AKRARGL+ R V R VA+L++F EGY +SS+ LVF RSK
Sbjct: 15 RMLVMVLSPAKTLDMALAKVATC---SQPKFLDEASILVKELRKLSQTKLKDLLGVSDAIAKLNYDRFKSFV-------DHAEASAPTDTFKQALLAFDGPAYKGIQADSFSDEELAYSQNHLRILCGLYGILRPLDLIQPYRLEMGQKLANNRGKDLYAFWSSTLAHEL-------NALFAAEGEKILLNVASQEYFKSVDLTALDPSI-TVVECIFKDDGKIKSVYAKRARGLMVRFVTTRRVNSVAELKSFDLEGYTFSAKESSETSLVFNRSK 273
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: A0A484E4P8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E4P8_BRELC) HSP 1 Score: 205 bits (522), Expect = 7.600e-58 Identity = 121/287 (42.16%), Postives = 178/287 (62.02%), Query Frame = 2
Query: 44 RVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRS-KAQRLAPAKPK 901
R++ +LSPAKTL+ + S SQP+LL A +I+ ++ ++ +K VSD++A LN +RF+ F +S V++ +A+ + A LA++GPAY+G++A+T SE D F +R+L GLYG+LRP DLIQPYRLEMG ++ KDLYE+W I L R + +++ T +++NVASQEY K++ L+ A VV C+FKDDG++ SV+AKRARGL+ R+++ +R + DL+ F EGY S SS LVF RS AQ+ A K K
Sbjct: 5 RLVFVLSPAKTLDLSSPRFSQC---SQPRLLSHAHELIDRLQKLSQSQIKSFFGVSDSLAKLNCDRFQHFDTSESVTKPI----IASATLKQAVLAFNGPAYQGLEASTLSESDLEFAQTHLRILCGLYGILRPLDLIQPYRLEMGQKLATKRGKDLYEFWGDTIVSELDALFRKQEAIDGKTGTRVLINVASQEYFKSLPSVALQTANISVVECIFKDDGKIKSVYAKRARGLMCRYLIQNRVDSIEDLKGFHTEGYSYSSSGSSQKKLVFIRSGAAQKAAMQKIK 284
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: A0A3M6V9M2_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9M2_9STRA) HSP 1 Score: 204 bits (518), Expect = 2.840e-57 Identity = 116/281 (41.28%), Postives = 172/281 (61.21%), Query Frame = 2
Query: 35 TTMRVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSKAQ 877
T+ R++ +LSPAKTLN+ + S +QP+ L ++E +R T +K L VSD +A LNV+R+++F +S +E + ++ + A LA+ GPAY+G+ A S+ D + +R+L GLYG+LRP DLIQPYRLEMG ++ + KDLYE+W I L + + E+ + +VVNVASQEY K++ L+ AG VVTCVFKDDG++ SV+AKRARGL+ R+++ R + + F EGY+ + SSD VFTR+ A+
Sbjct: 2 TSARLVYVLSPAKTLNFTTSSISQC---TQPRQLSHTHELVEQLRTLSHTKIKSLFGVSDALAKLNVDRYQVFNTSKSATEASNPSKTL----KQAVLAFSGPAYQGLGAYNLSKLDVEYAQTHLRILCGLYGILRPLDLIQPYRLEMGQKLANSRGKDLYEFWGDTIVYELDALFSEEEAKENVKQQRVVVNVASQEYFKSLPQSALKAAGIMVVTCVFKDDGKIKSVYAKRARGLMCRYLIQKRVDSLKGITGFDLEGYKYASTASSDDTYVFTRTGAE 275
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: D0NGY7_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0NGY7_PHYIT) HSP 1 Score: 203 bits (516), Expect = 3.150e-57 Identity = 120/273 (43.96%), Postives = 169/273 (61.90%), Query Frame = 2
Query: 44 RVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFT 862
R++ +LSPAKTL+ + AS SQP+LL +A ++E ++ + +K L+ VSD +A LN++RF+ F VS+ + A +G + AALA +GPAY+G++A + SE D F +R+L GLYGVLRP DLIQPYRLEMG + KDLYE+W I L + + + E ++VNVASQEY K++ L+ AG VV CVFKDDG++ SV+AKRARGL+ R+++ +R V + F EGY+ S SSD VFT
Sbjct: 5 RLVYVLSPAKTLDLS---ASRVSQCSQPRLLSDAHELVEQLQKLSQVKVKSLLGVSDALAKLNLDRFQAF----DVSKTATEATSPSGTLKQAALALNGPAYQGLEAQSLSETDLEFSQTHLRILCGLYGVLRPLDLIQPYRLEMGQKFENKRGKDLYEFWGDTIVSELDALFKEEEAKEDVKLPRILVNVASQEYFKSLPSSALKAAGISVVDCVFKDDGKIKSVYAKRARGLMCRYLIQNRVDSVEGITGFDLEGYKYASSASSDETFVFT 270
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: G4YKP5_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YKP5_PHYSP) HSP 1 Score: 203 bits (516), Expect = 4.310e-57 Identity = 121/284 (42.61%), Postives = 172/284 (60.56%), Query Frame = 2
Query: 35 TTMRVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSKAQRLA 886
++ R++ +LSPAKTL+ + AS SQP+LL +A +I +R + +K L+ VSD +A LN +RF+ F VSE + A + AALA++GPAY+G++A SE D + +R+L GLYGVLRP DLIQPYRLEMG + KDLYE+W I L + + E + ++VNVASQEY K++ L+ AG VV CVFKDDG++ SV+AKRARGL+ R+++ R + + F EGY+ + SSD VFTR+ A++ A
Sbjct: 2 SSARLVYVLSPAKTLDLS---ASRISQCSQPRLLSDAHELISQLRALSQAKVKSLLGVSDALAKLNYDRFQSF----DVSETATKASGPRETLKQAALAFNGPAYQGLEAHNLSESDLEYAQTHLRVLCGLYGVLRPLDLIQPYRLEMGQKFANKRGKDLYEFWGDTIVSELDALFSDEEAKEDEKKQRVLVNVASQEYFKSLPRDALDKAGISVVDCVFKDDGKIKSVYAKRARGLMCRYLIQKRVDSLEGITGFDLEGYKYSSAASSDDTFVFTRTAAEQKA 278
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: A0A2P4XAW6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XAW6_9STRA) HSP 1 Score: 203 bits (516), Expect = 5.260e-57 Identity = 127/289 (43.94%), Postives = 175/289 (60.55%), Query Frame = 2
Query: 44 RVLVLLSPAKTLNWAPAPASLSGVW--SQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSK-AQRLAPAKPK 901
R++ +LSPAKTL+ SLS V SQP LL +A +IE +R + +K L+ VSD +A LN +RF+ F S V+E S +E + AALA++GPAY+G++A SE D F +R+L GLYGVLRP DLIQPYRLEMG + KDLYE+W I L + + + E ++VNVASQEY K++ LE AG VV CVFKDDG++ SV+AKRARGL+ ++++ R + + F EGY+ + SS+ VFTR+ AQ+ A K +
Sbjct: 5 RLVYVLSPAKTLD-----LSLSRVTQCSQPHLLSDAHELIEQLRTLSQAKVKSLLGVSDALAKLNFDRFQAFDMSKTVTEATSPSETL----KQAALAFNGPAYQGLEAHNLSESDLEFAQTHLRILCGLYGVLRPLDLIQPYRLEMGQKFTNTRGKDLYEFWGDTIVSELDALFKTQETKEDVKLPRVLVNVASQEYFKSLPRSALEAAGISVVECVFKDDGKIKSVYAKRARGLMCKYLIQKRVDSLEGITGFDLEGYKYSSAASSEDTFVFTRTATAQKAALQKTR 284
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: W2N8Z4_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2N8Z4_PHYPR) HSP 1 Score: 202 bits (514), Expect = 1.090e-56 Identity = 120/281 (42.70%), Postives = 171/281 (60.85%), Query Frame = 2
Query: 44 RVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSKAQRLA 886
R++ +LSPAKTL+ + AS SQP+LL +A +IE ++ + +K L+ VSD +A LN +RF+ F S +E + E + AALA++GPAY+G++A SE D F +R+L LYGVLRP DLIQPYRLEMG + KDLYE+W I L + + + E ++VNVASQEY K++ L+ AG VV CVFKDDG++ SV+AKRARGL+ R+++ R + + F EGY+ S SSD + VFTR+ +++ A
Sbjct: 5 RLVYVLSPAKTLDLS---ASRVSQCSQPRLLSDAHELIEQLQKLSQAKVKSLLGVSDALAKLNFDRFRAFDVSKTATEATNPRETL----KQAALAFNGPAYQGLEAHNLSESDLEFAQTHLRILCSLYGVLRPLDLIQPYRLEMGQKFENKRGKDLYEFWGNTIVSELEALFKEEEAKEDIKLPRVLVNVASQEYFKSLPSSALKEAGISVVDCVFKDDGKIKSVYAKRARGLMCRYLIQQRVDSLEGITGFDLEGYKYSSSASSDDMFVFTRTASEQKA 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig699.17.1 >prot_P-littoralis_Contig699.17.1 ID=prot_P-littoralis_Contig699.17.1|Name=mRNA_P-littoralis_Contig699.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=396bp MRVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLback to top mRNA from alignment at P-littoralis_Contig699:54538..59063+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig699.17.1 ID=mRNA_P-littoralis_Contig699.17.1|Name=mRNA_P-littoralis_Contig699.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4526bp|location=Sequence derived from alignment at P-littoralis_Contig699:54538..59063+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig699:54538..59063+ >mRNA_P-littoralis_Contig699.17.1 ID=mRNA_P-littoralis_Contig699.17.1|Name=mRNA_P-littoralis_Contig699.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1188bp|location=Sequence derived from alignment at P-littoralis_Contig699:54538..59063+ (Pylaiella littoralis U1_48)back to top |