mRNA_P-littoralis_Contig699.17.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig699.17.1
Unique NamemRNA_P-littoralis_Contig699.17.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: D7FXE9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXE9_ECTSI)

HSP 1 Score: 461 bits (1186), Expect = 8.460e-157
Identity = 234/286 (81.82%), Postives = 259/286 (90.56%), Query Frame = 2
Query:   41 MRVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSKAQRLAPAKP 898
            MRV+VLLSPAKTLNWA +PASL+ +WSQPKLL+ AD V+E MR K+K DLKKLMS+SDNIADLNVERFK FL S++V +  +A ++ A +ARPAAL +DGPAYRGMDAATFSEEDW FGA SVRLLSGLYGVLRPTDLIQPYRLEMGSRV VAG KDLYEYWKGDIAQC++ED++G+GSV+S TDEFLVVNVASQEYSKAVDF QLE AGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVV+RAKD+ADLE+FSAEGYRLDRSQ  DGLLVFTRSKAQR AP KP
Sbjct:    1 MRVVVLLSPAKTLNWATSPASLAELWSQPKLLQAADPVVEVMRKKKKADLKKLMSISDNIADLNVERFKKFLGSSEVEKMSTAVDLVADVARPAALVFDGPAYRGMDAATFSEEDWAFGARSVRLLSGLYGVLRPTDLIQPYRLEMGSRVAVAGMKDLYEYWKGDIAQCILEDIQGEGSVKSGTDEFLVVNVASQEYSKAVDFDQLESAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVNRAKDIADLESFSAEGYRLDRSQCGDGLLVFTRSKAQRAAPTKP 286          
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: A0A835YNT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNT5_9STRA)

HSP 1 Score: 234 bits (597), Expect = 6.420e-69
Identity = 133/283 (47.00%), Postives = 185/283 (65.37%), Query Frame = 2
Query:   47 VLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKK-DLYEYWKGDIAQ--CLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSKAQRLA 886
            V+VLLSPAKTL+W PAP  L   ++ P LL  +D + + M+GK   DLK L+SVS  +A LN ER++ F  S  V+++        G  RPAA AYDGPA+ G++A T S+ D   G + + +LSGLYGV+ P DLIQPYRLEMG++V + G+K  L ++W+GDI +  C + + + + + +      +VVN ASQEY++AVD   L   G +V+ C F DDGR +SV AKR RGL+ARH++ SRA  V D++AFS EGY    ++S+   LVF RSK  RL+
Sbjct:    2 VVVLLSPAKTLSWEPAPPGLP--YAMPHLLPRSDTIAKLMKGKSVADLKSLLSVSPALATLNHERYQNFALSDSVADKK-------GELRPAAFAYDGPAFLGLEAETLSQSDLEHGQSVLCILSGLYGVVHPLDLIQPYRLEMGTKVELEGEKCALSDFWRGDITEHICQLLNEQQRSAGDKPPPPQIVVNAASQEYARAVDVKALRDTGVQVIDCTFHDDGRTVSVLAKRTRGLMARHIIQSRAASVDDIKAFSLEGYAFAEARSTPENLVFERSKEARLS 275          
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: A0A7S3XVD7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVD7_HETAK)

HSP 1 Score: 209 bits (533), Expect = 6.150e-59
Identity = 122/282 (43.26%), Postives = 172/282 (60.99%), Query Frame = 2
Query:   26 HLETTMRVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSK 871
            H+     +L++LSPAK+L W    A ++   + P  L E+D V   ++ K K DLKK+M +SD++A LN ER + +L S K +++ S  +    +A     A+DGPAY+G+DA + + E+  +   ++++L GLYGVLRP DL+Q YRLEMG+++     KDLY YW   I   L + +          DE ++VN+ASQEY+K+V+  +LE  G  VV C+FKD GRVLSVFAKRARGL+AR     R   VA L+ F  EGYR    QS+   LVF R K
Sbjct:    2 HITVRATMLMILSPAKSLRWEKVTARVTP--TLPPFLTESDLVARALKSKTKNDLKKIMGISDSLAALNFERNQSYLLS-KEAKKKSYGDPELNMA---VFAFDGPAYKGLDAESLNAEEMQYLQENLKILCGLYGVLRPCDLMQQYRLEMGTKMNCGQSKDLYSYWTETITPYLSDQICNN------QDEKVIVNLASQEYAKSVNLKRLEEEGVTVVNCIFKDRGRVLSVFAKRARGLMARWCAQQRPASVAALQGFDLEGYRFAAGQSTPTDLVFARDK 271          
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: A0A1V9YRA9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YRA9_9STRA)

HSP 1 Score: 206 bits (525), Expect = 8.710e-59
Identity = 124/277 (44.77%), Postives = 172/277 (62.09%), Query Frame = 2
Query:   44 RVLVL-LSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSK 871
            R+LV+ LSPAKTL+ A A  +     SQPK L EA  +++ +R   +T LK L+ VSD IA LN +RFK F+       +H+ A       + A LA+DGPAY+G+ A +FS+E+  +    +R+L GLYG+LRP DLIQPYRLEMG ++     KDLY +W   +A  L        ++ +   E +++NVASQEY K+VD   L+ +   VV C+FKDDG++ SV+AKRARGL+ R V   R   VA+L++F  EGY     +SS+  LVF RSK
Sbjct:   15 RMLVMVLSPAKTLDMALAKVATC---SQPKFLDEASILVKELRKLSQTKLKDLLGVSDAIAKLNYDRFKSFV-------DHAEASAPTDTFKQALLAFDGPAYKGIQADSFSDEELAYSQNHLRILCGLYGILRPLDLIQPYRLEMGQKLANNRGKDLYAFWSSTLAHEL-------NALFAAEGEKILLNVASQEYFKSVDLTALDPSI-TVVECIFKDDGKIKSVYAKRARGLMVRFVTTRRVNSVAELKSFDLEGYTFSAKESSETSLVFNRSK 273          
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: A0A484E4P8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E4P8_BRELC)

HSP 1 Score: 205 bits (522), Expect = 7.600e-58
Identity = 121/287 (42.16%), Postives = 178/287 (62.02%), Query Frame = 2
Query:   44 RVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRS-KAQRLAPAKPK 901
            R++ +LSPAKTL+ +    S     SQP+LL  A  +I+ ++   ++ +K    VSD++A LN +RF+ F +S  V++      +A+   + A LA++GPAY+G++A+T SE D  F    +R+L GLYG+LRP DLIQPYRLEMG ++     KDLYE+W   I   L    R + +++  T   +++NVASQEY K++    L+ A   VV C+FKDDG++ SV+AKRARGL+ R+++ +R   + DL+ F  EGY    S SS   LVF RS  AQ+ A  K K
Sbjct:    5 RLVFVLSPAKTLDLSSPRFSQC---SQPRLLSHAHELIDRLQKLSQSQIKSFFGVSDSLAKLNCDRFQHFDTSESVTKPI----IASATLKQAVLAFNGPAYQGLEASTLSESDLEFAQTHLRILCGLYGILRPLDLIQPYRLEMGQKLATKRGKDLYEFWGDTIVSELDALFRKQEAIDGKTGTRVLINVASQEYFKSLPSVALQTANISVVECIFKDDGKIKSVYAKRARGLMCRYLIQNRVDSIEDLKGFHTEGYSYSSSGSSQKKLVFIRSGAAQKAAMQKIK 284          
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: A0A3M6V9M2_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9M2_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.840e-57
Identity = 116/281 (41.28%), Postives = 172/281 (61.21%), Query Frame = 2
Query:   35 TTMRVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSKAQ 877
            T+ R++ +LSPAKTLN+  +  S     +QP+ L     ++E +R    T +K L  VSD +A LNV+R+++F +S   +E  + ++      + A LA+ GPAY+G+ A   S+ D  +    +R+L GLYG+LRP DLIQPYRLEMG ++  +  KDLYE+W   I   L      + + E+   + +VVNVASQEY K++    L+ AG  VVTCVFKDDG++ SV+AKRARGL+ R+++  R   +  +  F  EGY+   + SSD   VFTR+ A+
Sbjct:    2 TSARLVYVLSPAKTLNFTTSSISQC---TQPRQLSHTHELVEQLRTLSHTKIKSLFGVSDALAKLNVDRYQVFNTSKSATEASNPSKTL----KQAVLAFSGPAYQGLGAYNLSKLDVEYAQTHLRILCGLYGILRPLDLIQPYRLEMGQKLANSRGKDLYEFWGDTIVYELDALFSEEEAKENVKQQRVVVNVASQEYFKSLPQSALKAAGIMVVTCVFKDDGKIKSVYAKRARGLMCRYLIQKRVDSLKGITGFDLEGYKYASTASSDDTYVFTRTGAE 275          
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: D0NGY7_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0NGY7_PHYIT)

HSP 1 Score: 203 bits (516), Expect = 3.150e-57
Identity = 120/273 (43.96%), Postives = 169/273 (61.90%), Query Frame = 2
Query:   44 RVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFT 862
            R++ +LSPAKTL+ +   AS     SQP+LL +A  ++E ++   +  +K L+ VSD +A LN++RF+ F     VS+  + A   +G  + AALA +GPAY+G++A + SE D  F    +R+L GLYGVLRP DLIQPYRLEMG +      KDLYE+W   I   L    + + + E      ++VNVASQEY K++    L+ AG  VV CVFKDDG++ SV+AKRARGL+ R+++ +R   V  +  F  EGY+   S SSD   VFT
Sbjct:    5 RLVYVLSPAKTLDLS---ASRVSQCSQPRLLSDAHELVEQLQKLSQVKVKSLLGVSDALAKLNLDRFQAF----DVSKTATEATSPSGTLKQAALALNGPAYQGLEAQSLSETDLEFSQTHLRILCGLYGVLRPLDLIQPYRLEMGQKFENKRGKDLYEFWGDTIVSELDALFKEEEAKEDVKLPRILVNVASQEYFKSLPSSALKAAGISVVDCVFKDDGKIKSVYAKRARGLMCRYLIQNRVDSVEGITGFDLEGYKYASSASSDETFVFT 270          
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: G4YKP5_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YKP5_PHYSP)

HSP 1 Score: 203 bits (516), Expect = 4.310e-57
Identity = 121/284 (42.61%), Postives = 172/284 (60.56%), Query Frame = 2
Query:   35 TTMRVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSKAQRLA 886
            ++ R++ +LSPAKTL+ +   AS     SQP+LL +A  +I  +R   +  +K L+ VSD +A LN +RF+ F     VSE  + A       + AALA++GPAY+G++A   SE D  +    +R+L GLYGVLRP DLIQPYRLEMG +      KDLYE+W   I   L      + + E    + ++VNVASQEY K++    L+ AG  VV CVFKDDG++ SV+AKRARGL+ R+++  R   +  +  F  EGY+   + SSD   VFTR+ A++ A
Sbjct:    2 SSARLVYVLSPAKTLDLS---ASRISQCSQPRLLSDAHELISQLRALSQAKVKSLLGVSDALAKLNYDRFQSF----DVSETATKASGPRETLKQAALAFNGPAYQGLEAHNLSESDLEYAQTHLRVLCGLYGVLRPLDLIQPYRLEMGQKFANKRGKDLYEFWGDTIVSELDALFSDEEAKEDEKKQRVLVNVASQEYFKSLPRDALDKAGISVVDCVFKDDGKIKSVYAKRARGLMCRYLIQKRVDSLEGITGFDLEGYKYSSAASSDDTFVFTRTAAEQKA 278          
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: A0A2P4XAW6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XAW6_9STRA)

HSP 1 Score: 203 bits (516), Expect = 5.260e-57
Identity = 127/289 (43.94%), Postives = 175/289 (60.55%), Query Frame = 2
Query:   44 RVLVLLSPAKTLNWAPAPASLSGVW--SQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSK-AQRLAPAKPK 901
            R++ +LSPAKTL+      SLS V   SQP LL +A  +IE +R   +  +K L+ VSD +A LN +RF+ F  S  V+E  S +E      + AALA++GPAY+G++A   SE D  F    +R+L GLYGVLRP DLIQPYRLEMG +      KDLYE+W   I   L    + + + E      ++VNVASQEY K++    LE AG  VV CVFKDDG++ SV+AKRARGL+ ++++  R   +  +  F  EGY+   + SS+   VFTR+  AQ+ A  K +
Sbjct:    5 RLVYVLSPAKTLD-----LSLSRVTQCSQPHLLSDAHELIEQLRTLSQAKVKSLLGVSDALAKLNFDRFQAFDMSKTVTEATSPSETL----KQAALAFNGPAYQGLEAHNLSESDLEFAQTHLRILCGLYGVLRPLDLIQPYRLEMGQKFTNTRGKDLYEFWGDTIVSELDALFKTQETKEDVKLPRVLVNVASQEYFKSLPRSALEAAGISVVECVFKDDGKIKSVYAKRARGLMCKYLIQKRVDSLEGITGFDLEGYKYSSAASSEDTFVFTRTATAQKAALQKTR 284          
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Match: W2N8Z4_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2N8Z4_PHYPR)

HSP 1 Score: 202 bits (514), Expect = 1.090e-56
Identity = 120/281 (42.70%), Postives = 171/281 (60.85%), Query Frame = 2
Query:   44 RVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDLKKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDGPAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRVGVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKAVDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVADLEAFSAEGYRLDRSQSSDGLLVFTRSKAQRLA 886
            R++ +LSPAKTL+ +   AS     SQP+LL +A  +IE ++   +  +K L+ VSD +A LN +RF+ F  S   +E  +  E      + AALA++GPAY+G++A   SE D  F    +R+L  LYGVLRP DLIQPYRLEMG +      KDLYE+W   I   L    + + + E      ++VNVASQEY K++    L+ AG  VV CVFKDDG++ SV+AKRARGL+ R+++  R   +  +  F  EGY+   S SSD + VFTR+ +++ A
Sbjct:    5 RLVYVLSPAKTLDLS---ASRVSQCSQPRLLSDAHELIEQLQKLSQAKVKSLLGVSDALAKLNFDRFRAFDVSKTATEATNPRETL----KQAALAFNGPAYQGLEAHNLSESDLEFAQTHLRILCSLYGVLRPLDLIQPYRLEMGQKFENKRGKDLYEFWGNTIVSELEALFKEEEAKEDIKLPRVLVNVASQEYFKSLPSSALKEAGISVVDCVFKDDGKIKSVYAKRARGLMCRYLIQQRVDSLEGITGFDLEGYKYSSSASSDDMFVFTRTASEQKA 278          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig699.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXE9_ECTSI8.460e-15781.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNT5_9STRA6.420e-6947.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XVD7_HETAK6.150e-5943.26Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1V9YRA9_9STRA8.710e-5944.77Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A484E4P8_BRELC7.600e-5842.16Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A3M6V9M2_9STRA2.840e-5741.28Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
D0NGY7_PHYIT3.150e-5743.96Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
G4YKP5_PHYSP4.310e-5742.61Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A2P4XAW6_9STRA5.260e-5743.94Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
W2N8Z4_PHYPR1.090e-5642.70Uncharacterized protein n=1 Tax=Phytophthora paras... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig699contigP-littoralis_Contig699:54538..59063 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FXE9
PFAMsH2O2_YaaD
Model size1658
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue7.29e-160
EggNOG OGsCOG3022@1|root,2QWDD@2759|Eukaryota
Ec32 ortholog descriptionUncharacterised protein family UPF0246
Ec32 orthologEc-07_002950.1
DescriptionPeroxide stress protein YaaA
Cds size1188
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig699.17.1prot_P-littoralis_Contig699.17.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig699 54578..58633 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791445.734809-UTR-P-littoralis_Contig699:54537..545771680791445.734809-UTR-P-littoralis_Contig699:54537..54577Pylaiella littoralis U1_48UTRP-littoralis_Contig699 54538..54577 +
1680791445.8126786-UTR-P-littoralis_Contig699:58633..590631680791445.8126786-UTR-P-littoralis_Contig699:58633..59063Pylaiella littoralis U1_48UTRP-littoralis_Contig699 58634..59063 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791445.752095-CDS-P-littoralis_Contig699:54577..546971680791445.752095-CDS-P-littoralis_Contig699:54577..54697Pylaiella littoralis U1_48CDSP-littoralis_Contig699 54578..54697 +
1680791445.7630117-CDS-P-littoralis_Contig699:56300..564621680791445.7630117-CDS-P-littoralis_Contig699:56300..56462Pylaiella littoralis U1_48CDSP-littoralis_Contig699 56301..56462 +
1680791445.771986-CDS-P-littoralis_Contig699:56652..568161680791445.771986-CDS-P-littoralis_Contig699:56652..56816Pylaiella littoralis U1_48CDSP-littoralis_Contig699 56653..56816 +
1680791445.7826629-CDS-P-littoralis_Contig699:57330..574721680791445.7826629-CDS-P-littoralis_Contig699:57330..57472Pylaiella littoralis U1_48CDSP-littoralis_Contig699 57331..57472 +
1680791445.7984316-CDS-P-littoralis_Contig699:58033..586331680791445.7984316-CDS-P-littoralis_Contig699:58033..58633Pylaiella littoralis U1_48CDSP-littoralis_Contig699 58034..58633 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig699.17.1

>prot_P-littoralis_Contig699.17.1 ID=prot_P-littoralis_Contig699.17.1|Name=mRNA_P-littoralis_Contig699.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=396bp
MRVLVLLSPAKTLNWAPAPASLSGVWSQPKLLKEADAVIETMRGKRKTDL
KKLMSVSDNIADLNVERFKIFLSSAKVSEEHSAAEMAAGIARPAALAYDG
PAYRGMDAATFSEEDWTFGAASVRLLSGLYGVLRPTDLIQPYRLEMGSRV
GVAGKKDLYEYWKGDIAQCLVEDVRGKGSVESCTDEFLVVNVASQEYSKA
VDFGQLEGAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVSRAKDVAD
LEAFSAEGYRLDRSQSSDGLLVFTRSKAQRLAPAKPKAKPKAKPKAKPKA
KPKAKPEAKPEAKPEAKPKAKAESTSQDKPKPKSETTTTPSAAARGKKRP
APAVVAAAAAEKKRAAGGTCTARGKRATPPGQGTGGARAKAKKTR*
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mRNA from alignment at P-littoralis_Contig699:54538..59063+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig699.17.1 ID=mRNA_P-littoralis_Contig699.17.1|Name=mRNA_P-littoralis_Contig699.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4526bp|location=Sequence derived from alignment at P-littoralis_Contig699:54538..59063+ (Pylaiella littoralis U1_48)
CGCAACTGGATGACACAAATCGAAACACCTCGAGACGACGATGCGAGTGC TGGTATTGCTATCGCCGGCTAAAACACTCAATTGGGCACCAGCACCAGCC TCTCTATCAGGGGTATGGAGTCAACCGAAACTTCTGAAGGAAGCAGATGC CGTCATCGAGGTGGGTGCACACTACTGTCATGATGTAATAATCCCACAAG ATACAAAAGCTGCATAGAATGCTCCACACGCGAACAGACATCTTACACAG CACCGCAGCAGCTGCTGTGTAATGCACGTTTGCCTGCTGAATCTATCTTG AAATCATAGATGCATCCTCATCCTTTACTGCCGTGTGTGTGAGTGTGTGG GTGTGCATGAATAAATCGATTTGCACTCCAAAGCCGCAAGAAAACTTTTC CTCGAGTCGCAAGAAACACGACGGACCCCCGGGACACCGGACGCCGGGGA CGGCTCCCGCCCAGCATTGCCTAAAGCCAGTGGCAAATTGAGGGCAAATT CCCAACCCCATAACACAGAACTTCTTTGTCGTCTACGCTGAAGTACACTA CAACAGCAGTAACACGGGTCTCTTTGTACGGTCGCGTTGTGTGTTGGTTG TTGGTTGGCTGTTATCTCTGGCATGTTTTCCTTCGTGTACCCTGTTTGGG TCGCTTGGACTTGATGGGTACCCTTTTTGGGTAGGTGGCCCTTGACCACG GAAGCGTCTTCCCTATCGGATGAGTGCCTGTATTAGATAAAAAAATGCGA CTGGAACTTGGAACTTGGAACTGCGAATCCCTCTCTCATTGGCCAACAAC AATTACAAAATTTCCTGGAAAATCCTGCCGCCGTCGGAGTTCCCTCTTTC CAGTTCCAAGCCCTGAAATAATTTTAATCATCTCGTTCCTTAAAATTGCC AAGTAGCCCACATCGAACTTGGAACTGGGGAGAAATAAGGTTCTGATACC TGAAAGCACTTTCTTTCTCTCTGCAACGACCAACAGCAGAACACAACAAA TATAGATGGCGTCCCTCCATTTTGTTCATCCGACTCTTGTTCAAGACAAC CCCCAAGCCTGCTACTGCTGTGGCCGGTCGAAAACAAAAGCTATTGCAAT GGGGTGCTCGGATGTGTGTGCCGTTTGTGTGTGTTTGCGTGCTCTACCTT TACTGTGCGAGATATAGCGATGCATGTGCGTCGGTACGTGCGGGCGGTGT TGAAAGGAAAAATACCAACTGCCAAAAACTCAACGGCCACGCACGGCAGC AGCAGGGTCGCTTGGGCTTGTCGCCAAATTCAGGTTCCATGTTTCCATGT TCCAGTGCACGTTTTTTTATCCAAGACAGAACGACTGGAACTTGGAACGT GGAATCCTGAGGAATTCCCAGTTCCAAGTTCCAAGTTCTAATCGCAGTTT TTTATCTAATACCCGCCCTGAGTCAGCAGTACGGACCTTTAGAGGGTACT GAGTAGAGATCGGAACGGTTTTTATTACGAAGATAACACACACATAACAC ACATATGATCCCCATTTGCCCGACCACGGCCTCCTCAGCACCCACGACCT TTCGATTGGAGGGACGTCGCCGTGAACGGGAGGCTCTCAAACCGATTCGC CCATCACCCGCAACCCGCTGTTCCGATCTCATTTGCACCTAGCGCTCGTC CGCCTTACATTCCGTGTCGCATGACATGTGGCCGCTTGCCTTTCACCCAT GTGTGTGTGTGGTTTCTTTCTCGGCCCTTGTTTTGACTTTCTTTCGGTGC GCCCGATTGGCAGACCATGCGAGGCAAAAGGAAAACGGACCTGAAGAAGT TGATGTCGGTCAGCGATAACATTGCCGATCTCAACGTGGAGCGGTTCAAG ATTTTTTTGTCCTCGGCTAAAGTGTCGGAGGAACATTCAGCGGCAGAAAT GGCGGCGGGCATCGCTCGCCCGGCGGTGAGTGTGTAGCACGTTTCACGAG TATTCAAATTCCAGTCATTATTTATTTTTGTGTATTTACTACTTCGTCTT AACCTTCTCCCAGTGTACGTAAACATAGATACCCCCACAGTTCCGACTGT ACCGGGCATATTTTGAACCGGCAACCCAACCGAAAGTTTAAGTCTTTCAA TTTGGCTCTCTCCAGGCATTGGCGTACGATGGCCCGGCGTACCGAGGCAT GGACGCCGCAACGTTCTCAGAAGAGGACTGGACATTTGGTGCGGCGTCCG TGCGGCTTCTGTCCGGGTTGTACGGTGTTTTGCGCCCGACCGACTTGATC CAGCCCTATCGCCTCGAGATGGGCTCCAGGTGTGTGTGGGTGTGCTGTGT GGTCTTGAAACTCTCTCTTGGCACCTCGCCTCATGCGCTTGCGTTATGGG TAGTCTTGATGGCGCGTGGTCAGGCTTTGAGAGTCGTGTCCCCGGTACGC TTTCGGAAACAATTGTTTGCAGGCAGGCTTAGACGTTGAGCACTCTGTGT GCGGGTGTGGTGCCGCCCTTTGTGCTAGATAGTCATGCACTACCGGTAAG GTATTTTTTTTTGGTACCATTTTGGTTCGGCACCAGTGTGGAATTGAAGA CGGGTTTTACGAGCTCGCGACTGCCAACGCAATGCCGCGCTGCCATAATT GAAATATTGTAGTTCGCGTTGGTTCTGGCATTTCTACGGTCCTTCCATCG ATGAAAGTTTCATTGCACACTAGGCATTTATCTTCGCCTGGAATCTCAGG CACTAATGCTTCTCCTCTGTAAAGCACTTGAAGAAAGACGCCTCTCCTCA TTTCTTTGGTGCCCCCTCGCCCGCGCGTCCGCGGCGTGCATAGGGTTGGC GTTGCTGGGAAAAAAGATCTCTACGAGTACTGGAAGGGAGACATCGCGCA GTGTCTTGTTGAAGACGTCCGAGGGAAAGGCTCTGTCGAGAGTTGCACCG ACGAGTTTCTGGTGGTGAATGTCGCTTCGCAAGAGGTGAGATCAGAAGCC CCGGGCAACAGCATTCGAAAAGTGGACTTGTGTATCCGCGTAAATTATTT GCATGTTGTCATTCTCAACCAGATGGGCTTACTGCGCCTTGAACTCTGTG GATTGGGTTTACCCGCGGGTCGGGCCACGATGGGCCGCGGTGTTGTTTCG CGCGGCCTCTCCACCACACAGTAGTCGAGCACTCCCTTTTTTTTCATCGT GCTGAGCTTTGGCATTTATGACATGGGACGGTAGATTGCTTTCGTACCCA TCGCTGTAGAAGTCCGAAAAAAAATCGATTTAGAGCGCGCATCTCAAGTA TGCCCGATCGGTGCGCGATAGGTCGAAGCCAGTGTTCCATGTATGATAAG GTTTCACGATCCGATGGACCGCTCTCCCGCCGATACATTGAAAAGAACTT CCGGCTCGGACTTCTAGGTATTTTGTCCAGCACGTTCCGCGAAAGACTCT GGGGATACTGTAGTGAAAACCTGTCAGAGGCAATACTTTGAACGCTTTGT GTCCGTCCATCATCGGCTCTACTTTTCATTCCCCCTCGCTTTAAAGTATT CCAAAGCCGTGGACTTCGGGCAGTTGGAAGGCGCAGGCGGTAAGGTCGTG ACGTGCGTGTTCAAGGACGACGGGCGAGTCCTCTCGGTTTTTGCGAAGCG AGCCCGCGGCCTGCTCGCCCGACACGTCGTCGTCAGCCGAGCGAAAGATG TTGCCGACCTGGAAGCGTTTTCGGCCGAAGGTTATCGCCTGGATCGATCG CAGTCCAGCGACGGTCTTCTCGTGTTCACCCGAAGCAAGGCCCAACGACT TGCTCCGGCCAAGCCGAAGGCCAAGCCGAAGGCCAAGCCGAAGGCCAAGC CGAAGGCCAAGCCGAAGGCCAAGCCGGAGGCCAAGCCGGAGGCTAAGCCG GAGGCTAAGCCGAAAGCCAAGGCGGAAAGCACGTCGCAAGACAAACCGAA ACCGAAGTCGGAAACCACCACCACCCCGTCAGCCGCAGCACGGGGGAAAA AGCGGCCCGCTCCTGCTGTTGTTGCTGCTGCTGCTGCGGAGAAGAAAAGG GCGGCCGGCGGCACTTGTACCGCACGTGGCAAGCGAGCCACGCCACCTGG GCAAGGAACAGGCGGCGCTAGAGCCAAAGCGAAAAAGACACGATGAATCC ACGCATGTACTTAATAATGCCCTAACGCCAACTCGAGGCGAAGCGAAGCG ACGGCATCAAGGATTGATTTGGGTTGGCTTCGTTCGCAGGGTTTGTCTAA AATTGATCAGAACGGATACGGGAAGAAGTAGAAGAGGACCAAACAACGCG GTTTTGCGACACCCTCTGTTGCTTTTCGTATGATACAACTGGTGTATTCG CGTTCATGTGTCTCAAAAGGGTTGTATCAGGCACGTCCGTAATCGGAGGA ATCAGAATGTTAGAGATGTGTTGTAAATCCTCGTGTTTCCGACCATAAAG CTGGCATCCACTCCATCTGCTTTGTCCCCCCGCCGATCTGCCTCGTTTTT ACCCTGGCCCCCGCCCCCCGACACGCTCTGTGGCCGAGGTTGAGTACCTG GGGCAGGCCGAGTTTACTTCCCAGAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig699:54538..59063+

>mRNA_P-littoralis_Contig699.17.1 ID=mRNA_P-littoralis_Contig699.17.1|Name=mRNA_P-littoralis_Contig699.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1188bp|location=Sequence derived from alignment at P-littoralis_Contig699:54538..59063+ (Pylaiella littoralis U1_48)
ATGCGAGTGCTGGTATTGCTATCGCCGGCTAAAACACTCAATTGGGCACC
AGCACCAGCCTCTCTATCAGGGGTATGGAGTCAACCGAAACTTCTGAAGG
AAGCAGATGCCGTCATCGAGACCATGCGAGGCAAAAGGAAAACGGACCTG
AAGAAGTTGATGTCGGTCAGCGATAACATTGCCGATCTCAACGTGGAGCG
GTTCAAGATTTTTTTGTCCTCGGCTAAAGTGTCGGAGGAACATTCAGCGG
CAGAAATGGCGGCGGGCATCGCTCGCCCGGCGGCATTGGCGTACGATGGC
CCGGCGTACCGAGGCATGGACGCCGCAACGTTCTCAGAAGAGGACTGGAC
ATTTGGTGCGGCGTCCGTGCGGCTTCTGTCCGGGTTGTACGGTGTTTTGC
GCCCGACCGACTTGATCCAGCCCTATCGCCTCGAGATGGGCTCCAGGGTT
GGCGTTGCTGGGAAAAAAGATCTCTACGAGTACTGGAAGGGAGACATCGC
GCAGTGTCTTGTTGAAGACGTCCGAGGGAAAGGCTCTGTCGAGAGTTGCA
CCGACGAGTTTCTGGTGGTGAATGTCGCTTCGCAAGAGTATTCCAAAGCC
GTGGACTTCGGGCAGTTGGAAGGCGCAGGCGGTAAGGTCGTGACGTGCGT
GTTCAAGGACGACGGGCGAGTCCTCTCGGTTTTTGCGAAGCGAGCCCGCG
GCCTGCTCGCCCGACACGTCGTCGTCAGCCGAGCGAAAGATGTTGCCGAC
CTGGAAGCGTTTTCGGCCGAAGGTTATCGCCTGGATCGATCGCAGTCCAG
CGACGGTCTTCTCGTGTTCACCCGAAGCAAGGCCCAACGACTTGCTCCGG
CCAAGCCGAAGGCCAAGCCGAAGGCCAAGCCGAAGGCCAAGCCGAAGGCC
AAGCCGAAGGCCAAGCCGGAGGCCAAGCCGGAGGCTAAGCCGGAGGCTAA
GCCGAAAGCCAAGGCGGAAAGCACGTCGCAAGACAAACCGAAACCGAAGT
CGGAAACCACCACCACCCCGTCAGCCGCAGCACGGGGGAAAAAGCGGCCC
GCTCCTGCTGTTGTTGCTGCTGCTGCTGCGGAGAAGAAAAGGGCGGCCGG
CGGCACTTGTACCGCACGTGGCAAGCGAGCCACGCCACCTGGGCAAGGAA
CAGGCGGCGCTAGAGCCAAAGCGAAAAAGACACGATGA
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