prot_P-littoralis_Contig699.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig699.3.1
Unique Nameprot_P-littoralis_Contig699.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length507
Homology
BLAST of mRNA_P-littoralis_Contig699.3.1 vs. uniprot
Match: D7FXF6_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF6_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 3.420e-40
Identity = 126/308 (40.91%), Postives = 164/308 (53.25%), Query Frame = 0
Query:  203 PTLPACTGTSMADPEGRATSASVSAESGALPAPPELFMPIARRPETLSADTDGTDADRDAGLGEVSPVVYPPKRMRDLLEVKASNPGGKRDDSARSGEGPVSATANATTTKGSAGLGVFCKRAIRAGDVIFEEEALLKVSKDAVDCKVWDVVSAVACKYQRASVFAMDLLQVVAFARAPPSVQARVLKLFAPEEAAFPLVRRQAWNDALDMLHRHGLLAASPAAGGRESA-----GGDAGRSQESGAQSGGGRGPSRPPLGAERRSMLTKVLMICESNIFGEPEDEEDGTRVLFELTTRMNHSCLPNC 505
            PT PA   + + D +    +A+ +A +   P  P +     R  +  S    GTD+D  + +  +SP      RMR  +EVKAS  G     SA +                  GLGVFCK  ++ GDV+FEEEALL+VSK+AV  + W+ V+A     +   V AMDLLQVVAF  APPSVQ RVL+LFAP+    P  R  A    LD L         PAA           G  AGR Q++G++  GG       +G +RRS+L KVLMIC++NIFGE  +EE+G R LF L  R+NHSCLPNC
Sbjct:  163 PTPPATALSGVGDTQPDVATAAAAAAAAIYPKTPRVKADGDRDDDFYS----GTDSDDPSTV--LSPTTA--ARMRCPVEVKASRTG----RSATAXXXXXXXXXXXXXXXXXXGLGVFCKAGLKVGDVVFEEEALLRVSKEAVGRRPWEAVAAEGRWSKSWGVSAMDLLQVVAFEGAPPSVQERVLQLFAPDPEGVPQGRLHALEFFLDKLWTAMGALRPPAASSSSCVAAAANGKGAGRLQDAGSR--GGDXXXXXXIGRKRRSLLMKVLMICDANIFGEGANEENGPRSLFWLGCRINHSCLPNC 456          
BLAST of mRNA_P-littoralis_Contig699.3.1 vs. uniprot
Match: A0A6H5L4J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J8_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 2.050e-21
Identity = 107/329 (32.52%), Postives = 140/329 (42.55%), Query Frame = 0
Query:  195 AEDISGDSPTLPACTGTSMADPEGRATSASVSAESGALPAPPELFMPIARRPETLSADTDGTD-----ADRDAGLGEVSPVVYPPKRMRDLLEVKASNPGGKRDDSARSGEGPVSATANATTTKG--------------SAGLGVFCKRAIRAGDVIFEEEALLKVSKDAVDCKVWDVVSAVACKYQRASVFAMDLLQVVAFARAPPSVQARVLKLFAPEEAAFPLVRRQAWNDALDMLHRHGLLAASPAAGGRESAGGDAGRSQESGAQSGGGRGPSRPPLGAERRSMLTKVLMICESNIFGEPEDEEDGTRVLFELTTRMNHSCLPN 504
            A+   G  PT PA   + + D +    +A+V    G +PA    +     +P  + AD DG D      D D     +SP      RMR  +EVKAS  G              SATAN   T+G               AGLGVFCK  ++ GDV+FEEEALL+VSK+ V  + W+VV+A+    +   V AMDLLQVVAF  APPSVQ RVL+L                                                           G S    G +RRS+L KVLMIC++NIFGE  +E +    +  L    +   LP+
Sbjct:   19 ADAAGGAEPTPPATAFSEVGDTKPDVAAAAVV---GVVPAAAATYP----KPLRVKADGDGDDDFYSGTDSDDPSAILSPTTA--ARMRCPVEVKASRAG-------------RSATAN---TRGVXXXXXXXXXXXXXXAGLGVFCKAGLKVGDVVFEEEALLRVSKEEVGRRPWEVVAALEFLSKSCGVSAMDLLQVVAFEGAPPSVQERVLQLIP---------------------------------------------------------GVSSVTAG-DRRSLLLKVLMICDANIFGEGANEGEERTSVTVLAGLQDKPQLPS 264          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig699.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXF6_ECTSI3.420e-4040.91SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L4J8_9PHAE2.050e-2132.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 425..460
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..100
IPR046341SET domain superfamilySUPERFAMILY82199SET domaincoord: 314..505

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig699contigP-littoralis_Contig699:7144..10129 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig699.3.1mRNA_P-littoralis_Contig699.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig699 6556..14037 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig699.3.1 ID=prot_P-littoralis_Contig699.3.1|Name=mRNA_P-littoralis_Contig699.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=507bp
MGTAVVSIDSDLQVAKVVRVDKDNELALLLVGGREGQPGRTRWSFLKDLP
PGLLGVGASESHNLPKEGKDESTWTSEKPQNVEYEEQQQQQQQQEMLRNG
VQGGQVGAERGRGAVPGQPVKGGGTSSALPRSSDGGGVTTNRTDQEQAGR
SIAVEDQQRTTRREKRRPYKEGSRDLAEQQPQQQQQSLPAERELAEDISG
DSPTLPACTGTSMADPEGRATSASVSAESGALPAPPELFMPIARRPETLS
ADTDGTDADRDAGLGEVSPVVYPPKRMRDLLEVKASNPGGKRDDSARSGE
GPVSATANATTTKGSAGLGVFCKRAIRAGDVIFEEEALLKVSKDAVDCKV
WDVVSAVACKYQRASVFAMDLLQVVAFARAPPSVQARVLKLFAPEEAAFP
LVRRQAWNDALDMLHRHGLLAASPAAGGRESAGGDAGRSQESGAQSGGGR
GPSRPPLGAERRSMLTKVLMICESNIFGEPEDEEDGTRVLFELTTRMNHS
CLPNCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR046341SET_dom_sf