mRNA_P-littoralis_Contig698.20.9 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig698.20.9
Unique NamemRNA_P-littoralis_Contig698.20.9
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig698.20.9 vs. uniprot
Match: D7FHB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB7_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 3.170e-92
Identity = 175/316 (55.38%), Postives = 211/316 (66.77%), Query Frame = 3 
Query:  360 PLFTSDDGVSYLQNPDTGSEIWLVGVVHGKTASVELSQSVIREIKPQVVVLELDACRLDDLPQGTWMKTEDGLCWFIPEKEAEETAS--AAAKGGRDNELLDTLESKEAPFSIVSALAAKLFREALDA-VDRMFGEDISEMGSAVLAAQACGAQVLLGDRDFEVRQPRISQQPVQVRMVAAPSTLVARVDNDQVVYVGVKRQETKRRLVAAGLVEDVDDERLDDPEALLHDSMSRSDKKVLARLRLRDPETRETAREYYRALESLCDKRVLSAMIPERDEVMARNLMALEGNQITVALVGVFHVDGIESILMENGW 1298
            P FTS+DGVSYL+NPDTGSEIWLVGVVHG+  SVELS+SV+R  +PQVV+LELD+ RLDDLP G   K EDGL WF+PEK+ ++  +     +GG D+  L   +  + PFS +S+  AK F  A+ A VD    E++SEM  AVL AQACGA+VLLGDRDFE                                       ETKRRLVAAGL + V DERLDDPEALL+DSMS S++K  A L LR PETRETA E+Y A++ L ++R L AM+PERDEVMA NLM ++G  ITVALVG+FHVDGIE IL  NGW
Sbjct:   26 PAFTSNDGVSYLRNPDTGSEIWLVGVVHGQETSVELSKSVVRTTRPQVVMLELDSKRLDDLPPGEAQKAEDGLTWFMPEKQPDDAVAQYVTLEGGGDDVELSRGDRWKGPFSFMSSSRAKSFVGAIKAMVDVFEEEEVSEMEVAVLEAQACGARVLLGDRDFE---------------------------------------ETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKKFAGLDLRKPETRETAGEHYAAMKRLSNQRALEAMVPERDEVMASNLMTIKGKPITVALVGLFHVDGIERILKRNGW 302
[Close]
BLAST of mRNA_P-littoralis_Contig698.20.9 vs. uniprot
Match: A0A6H5KLL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL9_9PHAE)

HSP 1 Score: 304 bits (779), Expect = 9.130e-92
Identity = 195/429 (45.45%), Postives = 246/429 (57.34%), Query Frame = 3 
Query:   99 LVVFVFLPAGSFVVLPTQHLTKVHQRGT--------PEL-----------GANILKPESGLATGRR-----QFSRGFSTY--RRPQSTGVLGLGRQPASKVTEATRSTVQGERPLFTSDDGVSYLQNPDTGSEIWLVGVVHGKTASVELSQSVIREIKPQVVVLELDACRLDDLPQGTWMKTEDGLCWFIPEKEAEETAS--AAAKGGRDNELLDTLESKEAPFSIVSALAAKLFREALDAVDRMFGED-ISEMGSAVLAAQACGAQVLLGDRDFEVRQPRISQQPVQVRMVAAPSTLVARVDNDQVVYVGVKRQETKRRLVAAGLVEDVDDERLDDPEALLHDSMSRSDKKVLARLRLRDPETRETAREYYRALESLCDKRVLSAMIPERDEVMARNLMALEGNQITVALVGVFHVDGIESILMENGW 1298
            L+ F  +P  SFV+ PT  L +V++RG         P +           GA  L+        +       F RG S      P S   +G+             +T     P F S+DGVSYL+NPDTGSEIWLVGVVHG+  SVELS+SV+R  +PQVV+LELD+ RLDDLP G   K EDGL WF+P+K+ +   +    ++GG D+  L   E  + PF+ +S+   K F  A+ A+  +F E+ +SEM  AVL AQACGA+VLLGDRDFE                                       ETKRRLVAAGL + V DERLDDPEALL+DSMS S++K  A L LR P+TRE A E+Y A++ L ++R L AM+PERDEVMARNLM L+G  ITVALVG+FHVDGIE IL  NGW
Sbjct:    9 LLGFCSMPTVSFVLPPTPILARVNRRGATCTTDFRVPVVNGGGHGGSAGPGAKPLQRRCSRIAPKSCRCCFNFCRGMSHAFGGAPTSRATIGMRLASREGNHHVPANTPSEAIPAFASNDGVSYLRNPDTGSEIWLVGVVHGQETSVELSKSVVRTTRPQVVMLELDSSRLDDLPPGEAQKAEDGLTWFMPQKQPDNAVAQGVTSRGGGDDVDLPRGEKWKGPFAFMSSSRVKSFVGAMKAIIDVFEEEEVSEMEVAVLEAQACGARVLLGDRDFE---------------------------------------ETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKTFAGLDLRKPDTREAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGKPITVALVGLFHVDGIERILKRNGW 398
[Close]
BLAST of mRNA_P-littoralis_Contig698.20.9 vs. uniprot
Match: A0A6H5K4M4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4M4_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 2.480e-30
Identity = 136/452 (30.09%), Postives = 194/452 (42.92%), Query Frame = 3 
Query:   75 MACRQLFLLVVFVFLPAGSFVVLPTQHLTKVHQRGTPELGANILKPESGLATG--------------------RRQFSR--GFSTYRRPQSTGVLGLGRQPASKVTEATRSTVQGERPLFTSDDGVSYLQNPDTGSEIWLVGVVHGKTASVELSQSVIREIKPQVVVLELDACRLDDLPQGTWMKTEDGLCWFIPEKEAEETASAAAKGGRDNELLDTLESKEAPF--------------------SIVSALAAKLFREALDAVDRMFGEDISEMGSAVLAAQACGAQVLLGDRDFEVRQPRISQQPVQVRMVAAPSTLVARVDNDQVVYVGVKRQETKRRLVAAGLVEDVDDERLDDPEALLHDSMSRSD-KKVLARLRLRDPETRETAREYYRALESLCDKRVLSAMIPERDEVMARNLMALEGNQITVALVGVFHVDGIESILMENGWQ 1301
            M  R L L + F  L A SFVV P           T  +G+ +  PE G  T                     RR   R  G +      ++ +    +Q A+  T   R       P F  DD VSYL NP   SE+WLVG  H   +S  L ++VIR+IKPQVV++ELDA R+     G++MK         P K+ E+T +     G   E+    E    PF                       +A   K   +  +++D+       E   A+  A+ACGA++LLGDRD  +   R+S+              + ++D  ++   G  + ET   L A      +D   ++   + L    +R   +KV+   +       E A E Y            +AMI ERD+VMA NLM L+G Q+TVA+VG+ HVDGIE ILM NGW+
Sbjct:    1 MVLRTLSLALPFASLLAESFVVPPPSLSLSSASGSTWHVGS-VRNPEEGTTTAATGNPKHPGLLMELENTQLDRRALLRTIGGALASLASASALTASPQQAAAAGTAVGRRPGAKRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRV-----GSFMK---------PSKQGEKTLA----DGTGKEIAPPAERTRNPFFGAFFKQLLDPKVPVNDRITDFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEA-------------LRKIDLQKISQSG--QMETGLGLEA------LDGSSVESINSSLDILKNRETMRKVIGFYK-------EEAPELY------------NAMIGERDKVMAVNLMGLDGKQVTVAVVGLAHVDGIEGILMANGWK 393
[Close]
BLAST of mRNA_P-littoralis_Contig698.20.9 vs. uniprot
Match: D7FHB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHB5_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 3.120e-24
Identity = 115/427 (26.93%), Postives = 167/427 (39.11%), Query Frame = 3 
Query:   75 MACRQLFLLVVFVFLPAGSFVVLPTQHLTKV----------HQRGTPELGAN--------ILKPESGLATGRRQFSRGFSTYRRPQSTGVLGLGRQPASKVTEATRSTVQGERPLFTSDDGVSYLQNPDTGSEIWLVGVVHGKTASVELSQSVIREIKPQVVVLELDACRLDDLPQGTWMKTEDGLCWFIPEKEAEETASAAAKGGRDNELLDTLESKEAPFSIVSALAAKLFREALDAVDRMFGEDISEMGSAVLAAQACGAQVLLGDRDFEVRQPRISQQPVQVRMVAAPSTLVARVDNDQVVYVGVKRQETKRRLVAAGLVEDVDDERLDDPEALLHDSMSRSDKKVLARLRLRDPETRETAREYYRALESLCDKRVLSAMIPERDEVMARNLMALEGNQITVALVGVFHVDGIESILMENGWQ 1301
            M  R L L++     PA SFV LP   L  V          + RG    G +         +  E GL   + + S       R +S  +     Q +++ T  +    Q   P   S+D VSY  +P   S IWLVGVVHG  + V+L +  I  I+P+VV++ELDA R+  LP G  M+T +GL W+ PE+E E +A     G    E  +                     +  ++V  M      E+ +AV  A ACGA+VLLGDRD+E    R+ ++  +  M +A                                                                          R+ +  L +  D            EVMA+NLM L G Q TVA++G+ H+DG+E +L  +GWQ
Sbjct:    2 MGIRSLSLVLPLACSPAESFV-LPATRLRSVAPLRLDCDVQYSRGAARSGTDAAVKGRERFMSMELGLNPVKHRCSCQPVGAHRSRSLPLRSKQVQASAEETNLSADPTQETLPECISNDAVSYWVHPAKESHIWLVGVVHGAKSGVQLVEEAIGGIRPEVVMVELDADRICVLPPGEAMETRNGLWWWAPEEEPEGSADVDEDGXXXXEYAED---------------DXXXXDEEESVSPMI-----EIQTAVREAGACGARVLLGDRDYETTG-RLLEKAKRADMASAKE------------------------------------------------------------------------RKEFNDLTTSFDC-----------EVMAKNLMKLRGEQTTVAVIGMAHLDGVEKVLKGHGWQ 323
[Close]
BLAST of mRNA_P-littoralis_Contig698.20.9 vs. uniprot
Match: A0A6H5LN04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN04_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 4.000e-21
Identity = 77/196 (39.29%), Postives = 103/196 (52.55%), Query Frame = 3 
Query:  279 STGVLGLGRQPASKVTEATRSTVQGERPLFTSDDGVSYLQNPDTGSEIWLVGVVHGKTASVELSQSVIREIKPQVVVLELDACRLDDLPQGTWMKTEDGLCWFIPEKEAEETASAAAKGGRDNELLDTLESKEAPFSIVSALAAKLFREALDAVDRMFGED----ISEMGSAVLAAQACGAQVLLGDRDFEVRQPR 854
            S G+    + P   V+  T +    + P     D VS+++NP TGSEIWL+G++H     V+L QSVIREIKPQVV+LELDA R   LP GT  + ED L W+ P K         AKG R             P ++ +   AK  +   +   R F +D    +SE+ +A   AQAC A+VLLGDR  EV + R
Sbjct:   63 SYGLRASTKTPVVPVSPVT-TPANDQLPECLQSDAVSHIRNPSTGSEIWLLGIIHQAEPYVQLVQSVIREIKPQVVMLELDAERTFLLPPGTPYQGEDKLWWWKPAK---------AKGRR-------------PGAVSNRKKAKPRKTTRN--QRNFYQDEHVGVSEIWTAGREAQACRARVLLGDRSNEVSKRR 233
[Close]
BLAST of mRNA_P-littoralis_Contig698.20.9 vs. uniprot
Match: A0A6H5KTH2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTH2_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 3.140e-17
Identity = 88/270 (32.59%), Postives = 117/270 (43.33%), Query Frame = 3 
Query:  507 VLELDACRLDDLPQGTWMKTEDGLCWFIPEKEAEETASAAAKGGRDNELLDTLESKEAPFSIVSALAAKLFREALDAVDRMF--GEDISEMGSAVLAAQACGAQVLLGDRDFEVRQPRISQQPVQVRMVAAPSTLVARVDNDQVVYVGVKRQETKRRLVAAGLVEDVDDERLDDPEAL--LHDSMSRSDKKVLARLRLRDPE-TRETAREYYRALESLCDKRVLSAMIPERDEVMARNLMALEGNQITVALVGVFHVDGIESILMENGWQ 1301
            ++E+D CR+  LP G   K  DGL W+   +EA   A+A + G RD + +    +   P   +      + R    A + M   G ++SE  +A   A ACGA+VLLGDRDF                                       QET RR      V D D  R D  EA+  L DS +     V  R++ R  E T        R LE     R  + ++ ERDEVMA NL+ +E  Q TVA+VG  H  GI  IL  NGW+
Sbjct:    1 MVEIDPCRIKMLPPGEATKDGDGLWWWDAVQEAG-PATAVSSGDRDKDEVQAANTSRTPGDGLETATNAVARTRRRAKNDMNTDGMEMSEFYAAARQAVACGARVLLGDRDF---------------------------------------QETTRR------VSDAD--RADQEEAMSSLGDSSAGKKNTVEPRIKRRVLEGTSPALWRKLRDLEKTWKPRKFAVLVTERDEVMASNLLKVEEGQGTVAVVGAHHTIGIGGILKANGWK 222
[Close]
BLAST of mRNA_P-littoralis_Contig698.20.9 vs. uniprot
Match: D7G9B8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B8_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.100e-13
Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 3 
Query:  294 GLGRQPASKVTEATRSTVQ---GER-PLFTSDDGVSYLQNPDTGSEIWLVGVVHGKTASVELSQSVIREIKPQVVVLELDACRLDDLPQGT 554
            G G + ++K+     S V     ER P     D VS+++NP TGSEIWL+G++H     V+L QSVIREIKPQVV+LELDA R   LP GT
Sbjct:    9 GYGPRASTKIQAVPVSPVTTPANERLPECLQSDAVSHIRNPTTGSEIWLLGIIHQAEPYVQLVQSVIREIKPQVVMLELDAERAFLLPPGT 99
[Close]
BLAST of mRNA_P-littoralis_Contig698.20.9 vs. uniprot
Match: B8C7E8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7E8_THAPS)

HSP 1 Score: 75.9 bits (185), Expect = 1.490e-10
Identity = 112/435 (25.75%), Postives = 180/435 (41.38%), Query Frame = 3 
Query:  129 SFVVLPTQH--LTKVHQRGTPELGANILKPESGLATGRRQFSRGFSTYRRPQSTGVLGLGRQPASK--VTEATRSTVQGERPLFTS---DDGVSYLQNPDTGS--EIWLVGVVHGKTASVELSQSVIREIKPQVVVLELDACRLDDLPQGTWMKTEDG---------LCWFIPEKEAEETASAAAKGGRDNELLDTLESKEA--PFSIVSALAAKLFREALDAVDRMFGEDISE-------MGSAVLAAQACGAQVLLGDRDFEVRQPRISQQ--PVQVRMVAAPSTLVARVDNDQVVYVGVKRQETKRRLVAAGLVEDVDDERLDDPEALLHDSMSRSDKKVLARLRLRDPETRETAREYYRALESLCDKRVLSAMIPERDEVMARNLMALEGN-----QITVALVGVFHVDGIESILMENGWQF--WQSPALE 1325
            S  VL + H  +   H+     L  NI +P +            F T  R     V  +  QP+S    T    ++ Q    L ++   D  VS     D  S   I ++G  H  +AS EL+ +++RE+KP VV +ELDA R+     G   +++                             KG   +   +T ++     PF + + L     +   DAV  M+G+  SE          +V    A G+ ++LGDRD EV   R++Q      +R + + ++ V R   ++++   +K Q  K+      +  +V D  ++         M+  DK+      +   + +E  ++  +ALE    + +  AM+ ERD  MA  L  L  N       TVA+VG+ HVDGIE  L   GWQ   +  PALE
Sbjct:   70 SLTVLVSSHAFVAPAHRHRPTTLALNINQPPTDCDVAGVSRRDVFQTTGRIVGAAVSTVLIQPSSAQAATATFNASKQSTSTLVSNTLCDPSVSTWVKTDATSMRTIHILGTAHISSASAELAGTMVRELKPDVVFVELDAKRVARAIPGGVSRSDSASSXXXXXXXXXXXXXXXXXXXXXXXXXKGSITSTPNNTPDATTTSNPFDVQAKLVNVGSKYVGDAVKGMYGKLESEGFKAGDEFAMSVREGLAIGSTIVLGDRDVEVTLRRLTQALAKTDIRKLLSANSEVER-SMEELLPDNMKNQ-LKQTSGGNTVSNNVGDASINVSSMGFEGDMA-IDKQEFQTF-VETMKAKENVKKIMKALEKTAPE-IYQAMVAERDVYMAMGLDELSVNVNGKVDNTVAVVGMAHVDGIERYLASQGWQALSYPCPALE 499
[Close]
BLAST of mRNA_P-littoralis_Contig698.20.9 vs. uniprot
Match: K0STV5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STV5_THAOC)

HSP 1 Score: 75.1 bits (183), Expect = 1.930e-10
Identity = 78/314 (24.84%), Postives = 145/314 (46.18%), Query Frame = 3 
Query:  420 IWLVGVVHGKTASVELSQSVIREIKPQVVVLELDACRLDDLP-QGTWMKTEDGLCWFIPEKEAEETASAAAKGGRDNELLDTLESKEAPFSIVSALAAKLFREALDAVDRMFGEDISE-------MGSAVLAAQACGAQVLLGDRDFEVRQPRISQQPVQV---RMVAAPSTLVARVDNDQVVYVGVKRQETKRRLVAAGLVEDVDDERLDDPEALLHDSMSRSDKKVLARLRLRDPETRETAREYYRALESLCDK---RVLSAMIPERDEVMARNLMALE----GNQI--TVALVGVFHVDGIESILMENGWQ 1301
            + L+G  H  ++S EL+  +++E+KP VV +ELD  R+            ++G    I E+     AS++     + E         +PF + S + +   ++  +A+  M+G+  SE          +V      G+ ++LGDRD EV   R+++   +    +++++ S +   +++  ++   +K    KR+   +G+                 DSM+ S+   +++    D      A+E  + +     K    + +AM+ ERDE MA  L  L+    G +I  T A+VG+ HVDGIE+IL   GW+
Sbjct:  123 VHLLGTAHISSSSAELAGRMVQEVKPDVVFVELDKKRVGRAGLSNIENNAQNGASTSITERSGSSGASSSFFSTPNTEPPSADAKMSSPFDVQSRIESAGAQQVGNAMKGMYGKLESEGFKAGDEFARSVREGLLLGSTIVLGDRDVEVTLKRLTRAVTKTDIRKLISSDSEIEKSMES--LLPSDMKDSLQKRQSSNSGI-----------------DSMNVSEDVYISKREFTDFVETMKAKENVKVIMGALKKSAPEIYTAMVAERDEYMANGLDQLDATLAGKKIDSTCAVVGMAHVDGIETILAGRGWK 417
[Close]
BLAST of mRNA_P-littoralis_Contig698.20.9 vs. uniprot
Match: A0A7S2P6Y4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P6Y4_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.540e-9
Identity = 97/361 (26.87%), Postives = 154/361 (42.66%), Query Frame = 3 
Query:  309 PASKVTEATRSTVQGERPLFTS---DDGVS-YLQNPDTGSEIWLVGVVHGKTASVELSQSVIREIKPQVVVLELDACRLDDLPQGTWMKT-EDGLCWFIPEKEAEETASAAAKGGRDNELLD------TLESKEAP---FSIVSALAAKLFREALDAVDRMFGEDISEMGSA-------VLAAQACGAQVLLGDRDFEVRQPRISQQ--PVQVRMVAAPSTLVARVDNDQVVYVGVKRQETKRRLVAAGLVEDVDDERLDDPEALLHDSMSRSDKKVLARLRLRDPETRETAREYYRALESLCDKRVLSAMIPERDEVMARNLMALEGN-------QITVALVGVFHVDGIESILMENGWQ 1301
            PA  +T +T +T    + + ++   D  VS +++N  T   I ++G  H  +AS EL+  ++REIKP VV +ELDA R+     G    T +        E  A+ T S  A        L       +  S +AP     I + L     +   +AV  M+ +  SE   A       V    A G+ ++LGDRD EV   R++Q      +R + +  + V             K  E        GL+ D     ++ P     DS++           +   + +E  ++   AL+    + +  AM+ ERD  MAR L  L  N       + TVA++G+ HVDG+E+ L  NGW+
Sbjct:   50 PAFAITSSTETTTSQSQTIVSNTLCDPAVSTWVKNDRT---IHILGTAHISSASAELAGKMVREIKPNVVFVELDAKRVSRAGIGNSTSTSKTNTVASSNEGAADSTPSVTAAAVETETTLAPKSSVISTPSNDAPPRKIQISNPLVNVGSKYVGNAVKGMYTKLESEGFKAGDEFINSVREGLAIGSTIVLGDRDVEVTLKRLTQALTKTDIRKLLSSDSEVE------------KSME--------GLLPDQMKSNMNQPS----DSVTMGVDDATFNSFVETMKAKENVKKIMGALKETAPE-IYQAMVAERDVYMARGLDELGMNVKSGSSVETTVAVMGMAHVDGVENYLATNGWK 382
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig698.20.9 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FHB7_ECTSI3.170e-9255.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLL9_9PHAE9.130e-9245.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4M4_9PHAE2.480e-3030.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FHB5_ECTSI3.120e-2426.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5LN04_9PHAE4.000e-2139.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTH2_9PHAE3.140e-1732.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G9B8_ECTSI1.100e-1350.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B8C7E8_THAPS1.490e-1025.75Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
K0STV5_THAOC1.930e-1024.84Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2P6Y4_9STRA1.540e-926.87Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig698contigP-littoralis_Contig698:107813..122188 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FHB1
PFAMsTraB
Model size2569
Max annot lvl2759|Eukaryota
KEGG rclassRC00034,RC00767,RC02141,RC02755
KEGG koko:K03781
KEGG ReactionR00009,R00602,R02670
KEGG Pathwayko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014
KEGG ModuleM00532
Hectar predicted targeting categorysignal peptide
Exons8
Evalue2.69e-30
EggNOG OGsCOG1916@1|root,KOG2860@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-03_004050.1
EC1.11.1.6
DescriptionTraB family
Cds size1254
COG categoryKLT
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig698.20.9prot_P-littoralis_Contig698.20.9Pylaiella littoralis U1_48polypeptideP-littoralis_Contig698 109054..122114 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791444.6019993-UTR-P-littoralis_Contig698:107812..1090531680791444.6019993-UTR-P-littoralis_Contig698:107812..109053Pylaiella littoralis U1_48UTRP-littoralis_Contig698 107813..109053 -
1680791444.7389965-UTR-P-littoralis_Contig698:122114..1221881680791444.7389965-UTR-P-littoralis_Contig698:122114..122188Pylaiella littoralis U1_48UTRP-littoralis_Contig698 122115..122188 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791444.621307-CDS-P-littoralis_Contig698:109053..1091911680791444.621307-CDS-P-littoralis_Contig698:109053..109191Pylaiella littoralis U1_48CDSP-littoralis_Contig698 109054..109191 -
1680791444.6353009-CDS-P-littoralis_Contig698:109521..1096201680791444.6353009-CDS-P-littoralis_Contig698:109521..109620Pylaiella littoralis U1_48CDSP-littoralis_Contig698 109522..109620 -
1680791444.647206-CDS-P-littoralis_Contig698:110507..1108451680791444.647206-CDS-P-littoralis_Contig698:110507..110845Pylaiella littoralis U1_48CDSP-littoralis_Contig698 110508..110845 -
1680791444.6664534-CDS-P-littoralis_Contig698:111109..1112571680791444.6664534-CDS-P-littoralis_Contig698:111109..111257Pylaiella littoralis U1_48CDSP-littoralis_Contig698 111110..111257 -
1680791444.6833398-CDS-P-littoralis_Contig698:111734..1117761680791444.6833398-CDS-P-littoralis_Contig698:111734..111776Pylaiella littoralis U1_48CDSP-littoralis_Contig698 111735..111776 -
1680791444.6997805-CDS-P-littoralis_Contig698:112098..1121971680791444.6997805-CDS-P-littoralis_Contig698:112098..112197Pylaiella littoralis U1_48CDSP-littoralis_Contig698 112099..112197 -
1680791444.7163732-CDS-P-littoralis_Contig698:112752..1129841680791444.7163732-CDS-P-littoralis_Contig698:112752..112984Pylaiella littoralis U1_48CDSP-littoralis_Contig698 112753..112984 -
1680791444.7287986-CDS-P-littoralis_Contig698:121956..1221141680791444.7287986-CDS-P-littoralis_Contig698:121956..122114Pylaiella littoralis U1_48CDSP-littoralis_Contig698 121957..122114 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig698.20.9

>prot_P-littoralis_Contig698.20.9 ID=prot_P-littoralis_Contig698.20.9|Name=mRNA_P-littoralis_Contig698.20.9|organism=Pylaiella littoralis U1_48|type=polypeptide|length=418bp
MACRQLFLLVVFVFLPAGSFVVLPTQHLTKVHQRGTPELGANILKPESGL
ATGRRQFSRGFSTYRRPQSTGVLGLGRQPASKVTEATRSTVQGERPLFTS
DDGVSYLQNPDTGSEIWLVGVVHGKTASVELSQSVIREIKPQVVVLELDA
CRLDDLPQGTWMKTEDGLCWFIPEKEAEETASAAAKGGRDNELLDTLESK
EAPFSIVSALAAKLFREALDAVDRMFGEDISEMGSAVLAAQACGAQVLLG
DRDFEVRQPRISQQPVQVRMVAAPSTLVARVDNDQVVYVGVKRQETKRRL
VAAGLVEDVDDERLDDPEALLHDSMSRSDKKVLARLRLRDPETRETAREY
YRALESLCDKRVLSAMIPERDEVMARNLMALEGNQITVALVGVFHVDGIE
SILMENGWQFWQSPALE*
back to top

mRNA from alignment at P-littoralis_Contig698:107813..122188-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig698.20.9 ID=mRNA_P-littoralis_Contig698.20.9|Name=mRNA_P-littoralis_Contig698.20.9|organism=Pylaiella littoralis U1_48|type=mRNA|length=14376bp|location=Sequence derived from alignment at P-littoralis_Contig698:107813..122188- (Pylaiella littoralis U1_48)
CACAGAGAGGAGAATCTGTCGGAACAAAGACGCAGAGGGTAGAGCGATAC
TCACCGCCGCCACTTCTTGAGCATATGGCGTGCAGGCAGCTTTTCCTGCT
GGTGGTGTTCGTTTTTCTACCTGCAGGCTCCTTTGTCGTGCTACCAACGC
AGCATCTGACCAAAGTCCACCAAAGAGGAACTCCTGAACTTGGGGCGAAC
ATCTTGAAACCCGAGAGTGGGTTGGCGACAGGGTGAGTGGGGTAAAATGG
ACATTGTGCAGTCTTCGACGCTCAAACGCCGAAATGGGTCATCGTTCTTT
AATGCCGGTTCGAACTTCTTCAGCACGTCCCGGTTGTCAATTCGGTAGAC
TTGTGTATCAAATTCATTTGCAAACCTCAAGGCGTTTTATTGCTGTACCG
TAACAATCATGACATGATTCGCGATCAGAGTTGTCTTATTTTCCTCAGAA
GCAGCACTCTCTGGGAACAGAGCGGAAGTTCCACCTCTCCTGGTACATGA
ACACGCCAACCTGATCAACTGCACTAAATTTTGGTGTCCTGCAAAGAGCA
CCCAAAACGTCACGATACAGGGGCATCAGACCAATAGAACAGGGTTGGGC
GCCGAAACAAAGGTTGGAAGGTTGTGGTTGGGGCGTTATCGCGACACAAA
TGTTGTGATTCAGAACTCTGTATTGATGTCGCCATCTCAGATGAAAAACT
CTATCCTCCACGTATAAACCTAAGGACGAAACAGTGAGCACGAGAGGGCG
CTCAAGTAAGACGTGTGGTGTGAATTAAGCCGGGGTTACGAATTACGAAG
TACTCCGGAGTATGTCAGAAGGAGACATCATGAAGGAGCACCGCCGTGTA
GCTGGCTAGCTCTGCTTGTGCTGCTGTTGTTCATACAGCAGTATGGGTCG
TTGAAGATACCGGTATGTTGTACAGCAGTCGAGATTGTGTCCGCATCTCG
GCCCGCGATCAAACACCTTGCATGATCTTCCACTGCGGTACTCACCGTCA
TGGGACCCAATCTCCGGAACCTTCGGGTCTACAGCAGTAGCTCATACCAC
GCTGCTGCCTCGGAAAACGCTTAATTCAGGAGATCGGGGCCTATGTGGCG
GCGAGTACAGCAGTGGAAGATCATGTTAGATGAGTGGTTTCGGGCCGAGA
TATGTTTGTGTGTGTTGTCATCCGTTTATTCTGGGCAGCAGTCTACACCT
TTCGTATGATGTGGGTGCTTCAGCCGGGGTCACACAAGAGGAAGGTCACA
CACGAGCTTTTTCATTTATTTTGTTTTATTGAGAAGCCGTCCACAGCGCA
GCGAAGTGCAACTTCGGTGTCCAACTGCTTCGAATCCATACCGACTTGGT
CGTGATGTGTTGTTGTTGTTGTTGATTCTCACATTAGCTCACTATCGCCG
CAGTCTAGCCCGTGGTCACAAACCAGGCACATATCGTGCTAGGAGGAAAA
AATAAAAAAATAAATATATGGACTATGATCACCCACAGTCAAATCAGATA
TGGTACCGTTGGGGTACCATCTGTGGTGGCCAGAATACCAAACAAATACA
GAAAAAATAACAGGCTCGAAAGAAAAACAAAAATTGGAAACAGTCCGACA
AACAAAAAATAACCAAGACAAACCTCAACCGTAACCATATACTTCGAAGT
ACTTCGTACATCGAACCAGGGCCCAGGGCCATGACAGACCAAGGCAAACG
CAAACCAGGGCGATGGTCCAGTAACTACATGATCAAAAGACGAAAGACAA
AAAATAAAATAAAAAAGAAGATACAGGGAGGGCACAAAGACTGAGGGAGT
GCATTCGTAGACAAACACAACAAACAGGCCGCCAAACAAAGAGGAAGCAG
GGGAACGAAAAGGGAAAAGAAGACCGGAAGTACCGGAAGTCGGGGGGGGA
GGAGGGGGGATGATAAAAATAAAATAAAAGGCATGCAATCCATCGCAAAC
GTGTCTTGCCACGAGGTCTGCCTGTTCACGCTTGCTCTCCTCAGTCGCAC
TCATGCCTCCTGCTACTGGCACCACCATACCCAGTTGTTTCTGCCCCACA
TCTTTGGCAGCAGCTACACCACCACTCCGCCCTACAGGTTTTCCACTCCG
GCCACCCCGTAGCTTGGCATTGGACTGCTTCTTCTTGTGCTGTGCAACTC
CAACCCCACTACCCCGCTGCCCTTGTGCCCCCCCGTACCCCTCCTCTCGT
TTATCCCCGCCATCCGTTCTCCCTCTTTTAGTCAAGGCCTGCCCCTCAGC
CGCGTCCCTCTCCCTTTTCCGTCGACGTGTCTCTGATAAGTCTCCCTCTT
TCTTGAGCCACTCGTCCGTGAACCGCCGCGCACCCTCGTCGATCCTGTCG
TACCACTCGTCAGCTCTCTTGGCACTTGCCTCCCACCCCTCCTTTTTTGT
CGACCACGATGTCGAACGCTTCGAGGTCCTCCTGCATTCGCCTCAGCCAG
TCAAACTCTTGCCCCCCCAGATACCTCGCTCCCCCCTGCAATTCTCCCAA
AAGAGCAATTTTCGGGAGTCTCTCGTCTCCCATGCGCGCAACGAATCCTG
CGAAGCACAGTCGCCGCTTGCGCACGGTGGCCTCAACGCTCTCGTTGCAA
CCCGCGGTGATCAGGGCTTTGGCGTAGGAGAGGGGTCGGTCTGTTCTCTC
CCTCTTTTTCCATCCGATGCAGCGAAGGAGGAAGAAGTGGTGGGCTGACC
GAAGCTTGCGGTACTCCGCTGGCTTCAGATTCCATGTGACACACCCGTAG
AGTAGGGTCTCCACGACTTCAACTTGGAGGAGTCGTACTTTTAGTCGAAG
AGGGGCCCCCGGGCGGTCGTACATTGCCTGGCTGTTGCGCCGGAAGCAGG
CGTGCGCTCGCTGCACTCGGTTGTTAATCTCGCCCTCAATGCTACCGTCC
TCACAAATCTTACCCCCGAGATAAATAAAGTCTTTCTTTTGCTTGAAGAC
CATCCCGGCAGCGTCGATCGTGAACGAGCACGCCTCCATCCCTTTCGCGA
GCATACACATGGTCTCCGTCTTGGGTTCTGACACCAACAGCCCAAACCGC
CCGGCCACACATACGATGATCGACATCATCTTCTCAAGGCTCCCAAGTGA
TTGAGATACAATAAAGGCGTCGTCGGCGTAGAGCATACTCCAGATGGACT
TCACTGCCTCCACCAGTCGGGCGTTCCTCCCCTTCCCCTTCGTCATCTTC
CTCTTGACCTTGGCCATGTCCGCCATCACCTCCGCGTCCTTGCTGATCTC
GGCAAAGGCCACCATGAGCATCGCAGCAAAGAAAAGGTTGAACAGCAGGG
GTGCCAGATTGCATCCCTGTCGGAGTCCCTGCCCCACATCAAACCAGTCG
GAGCACCTCCCGTCGTCCATCCGTACGCATGCTCTCATTCCGTCGTGGAA
TTGGCGAATGACCGCAAGCATCTTGGGGGGCACTCCGAGCCGCTTGAGCA
CCGACCACAGTAGTTCCCGGTCTACGGAGTCGTAGGCTTTCGTGAGATCG
ATAAAGCAGGCGTACAGTGGGGTTGACTTCTTCCGCGCAAGCTCGTGTAG
GCGTCGAACCACGAACATCATGTCAACCGTTGAGCGGTTTGGTCGGAAAC
CGCTCTGTTCCTCCGGCAGGATGCCCTCTCTTTCGCAGTAATCGCTCAGC
CGGGTGGCGACCAGCTTCAAGAGTACCTTGCCAGCGTGGGCCACAAGGGA
GATGCCTCGGTAATTGCCGCATTCCGTCTTGTCCTTCTTCTTGTGCAGCA
CCTTGATCGAAGCATCTTTCCACTGCTGTGGCACCCTTCCCGATTGCCAG
ATGTTGATGATGATACTGTAGAACTGCCGTAGGAGGGCTTGGTCTCCGTC
AAGGAAGAGCTTGATAAGCTCCGCCGGTAGCTCGTCCGGGCCCACAGCTT
TCCTGTTGGCCATTCCCCGGATTGCTTCCTCAACCTCAAATAGCGAAGGG
ACGTCATCAAGCGGTACGCACTGAGGCCAGGGCTCGATCTTGTCCACCAC
TCTCGGATCCAGGGTCGGTGACCTGGTGTTGAGCAGAGCATGGAACTACC
TGGCCCACCGCTCGAGGATAAGTGCGGGGTCCCGAAGAAGATTTCCATCC
TCGTCCTTGATGTTCTGTGAGGTGAAGGCCCTCTTCCCCTCCACATCCAA
TCCCTTCATGTGCTTGTTGAAACCGGCCTGGTCCCCTTCGCGGCTTTTCT
TCTCGAGCTGACTCACAAATCCATCGAAGAACTCATTCACAGCACTGGCT
CTAAGTCGATCAAGGTGCTTCCCGGCGGCCTTGAGGTTGCTCCTGAGGGT
GGGATCTTTCGGCGCACCGTGGAGCTGCTTCCGGGCGTCCTCCCTTTTAA
GCCATGCCACGTGGATCTCCTGCTGCACTTCCTCACTGGCGCACCAGCCA
CTTGGCAATCTCTTGCCCTTGGCCCGGGGGGCAACGTCAGCGGCGGTGGA
CATCACAGCAGTCGTCAAGGCCGATGCGAGCTCATCCACATTCGCACCTT
CCATGATGGGGAAAATTCTGTCTCTAAAGTCTTTCCGAAGTTGGGGGTCC
GCCATCAACCGTTGTAGATCGATGCCAGCGGAGGTGCTGCTGCTGCTACC
CCTCACACCTCGATTCGGTGCCACTCGGCCAAACAAGCGGATGTTGGAAA
GGACGAGGTTGCGGTCGGAATCCTTACGATCGATACGCCGTACGGAGACG
TTGCGCACCAACCGAAGGTCTACCTGGCGGGTCAGGATGTAATCGAGTCG
GTATTCTCCCTTCCCGCGGTTGGAGCTTTTGAAAGAGTGTGATATCCCGC
GTTTGGGTGTGCAGAAAAAGGTGTACAGGATGGAAAGCCTACAGCTTGCT
GCGAATTCCACCAGTCTCCGCCCGTTATCGTTCCGCTTGTCACGCCCGTA
CATGCCCATCACCTTATCAGGGGTACTCTCATCCTCTCTTCTACCGGTTC
GAGCGTTCGCATCCATCATAACCACGACGTGTTCCCTGCTAGGTACTGCA
TTAACTGTCTCTCTCACTGATAGCCAGAATCCATCTTTCTCACTAGTCCC
ATCCGTCTCGGTGGGTGCATAGGCAACCACAAAGGATACACCGTTCGAGC
CAGTGAGTTGCAGGCGTACCTTCATCAGTCTTGCGCTAATCCACTCCACG
GTCATACCTCCTTTGTCCATCCCATCCACGATGGACTGCTTGATAGCCAG
CCCGACCCCGTGCACTCCTTTCTTCTCGGTGGTCCCGGCAAGTTCTCCAC
TCCAAATCACAACATATCCCGCGTGTGTGAAGGCACCATCATTAGCACGC
CGGGTTTCCTGGAGGCCAACCACATCGCAACCGGAGCTACCACAGAGCTG
TAGCACGGTGTTGGAGTTGTGGCCGATACCGTTGGCGCCCTTGTAAACAA
GGGTGCGGACGTTGAAGGAGCCCACTAACAGTTCGCCTGCACGGGCCTTT
GTTCTCATCTCTGCCCGTCTCTTTCGGTCAGCCTTGCGTACAGGTCGGTT
TCGCTTCCATTTCTTTCGAGCTGCAATTTTCCTCCGTTCCATCCATCTTT
GCCAAGCTCGGTACTCGTCTACGTTCAGGCGGGCTGGGGACGACACTCCC
GGCCAGCGTCGACGTGAAGGTCGACGAGGGTGCTTACTAACGTGGTGCCT
CCTAGTCTCTCTACTCCTCAGGCCACGAGTTCCACGATTTCCGCGGTGAT
GTGTCGACACAGCTGCTGCAGACAGTTTGACTGTCGCGGAGAACAGACCA
TAGGTGGTCCGGACTGCTGTAGTGCCATTCGTCACCTCCATCACCTACCC
AGCCTCGGCGTGCGCCGAGTGGGGTCTGACCACACCACTCCCACACTACC
CTGTCTACTTTGGTAGAGCCCGGTGTGTCCACGAGGGACCCACTAGGTTG
GGTGACCCCGGCCGGGGAGCAGCCGAGGGAGGGAATGTGTTTGTGTGTGC
CTATGTGTACGTGGGTGTGAGTCTATGTGCGAATAAAAAAATAAAATAAC
TGAGAAAGGGGTGCCATGATTTAATTTTCGAGGTTTACGGAGTCTGTTTT
ATCTGTGTGTGTGTCTGTCTGTCTGTCCGAGACATTGTCCACATTTTGCA
ACACTATGGCACCAGTTCAGTACAGATCGTTACGACCAAGTGCTTGAACT
GATTTAGTAAATACGGTAGCATCTACCCATTCCTGTTGGGTTCACCGCAG
CCTGTGTCCGACGCGCACAGCTATGTTGGAGGAGGCTAATAATCGGTGTC
CCTTGTTCGTGAAAAATTATGATAGCGTTTTGTGTTCGTAGTGCTGGCGG
AACACCAGCTGTTCTGCAGCACTGCAGCAACGGTATACGCCCAGACAGCA
ACGCACACGGCTTAACTTTATTTGAGAAGCGGCCCTCCAACACACACTGC
TTCTAAACCTCGATCCACTAGTATTTTTTTTGCACACCTTCCCTCCTGCA
GTAGTTGCCTTTGGTTTTTAGTGCGAGTCGGGTTCAGCAATCCCTTCGCT
CTGTTTACTCACGAGTGAATCGCTTTCCACTGTAAAGTTGCAAGAAAACA
CTCTCAAGAGAGAAACGAACCTGCATCCTTACTGCTAGCAGGTTGACGTG
GGAACCACTAGACCACCGGGGCGAGATGCGGACGGTTTTTGGATGCAGCT
CCACATATCTTCGACCACCGATATCACAGCCCCAGCAGCAGCTCTGAGCG
TGCCAACACGCACGTCGCCTCCAATGATGTATTCTACTGGTATTATATGT
GACCCCAAATCGATTCACGCGGGAAGGCTGACTTATATTTATGGTGATTT
TTATACTGGAAATAGACTGGATATTTTTTCGAATTGTAGTGAGATGACAG
GGGTCCCTTCGGAACCTCCTATTTCTTATTTTACTTGAGGCTCGCGGCCT
AATGGCGCTCCAAACCAAGCACCTGTCCTTAGCGCCAATTATACAGGGTT
TGATGTGGGTTTCGTAACTGAGCACGTGTTCTTATGGTCAAGGTTCTTAT
ATTTTGAAAATTTTGAAGGTCAAGTGCTTACCTGCCAAGTTCTCAAGTGG
TGGCGCATTTAGGAGATCTGGACTTCAACTTCGTCTGCCGACGCGTGATT
CGTGCTATGGTATTGAACAATTAGAGTGACAATCACATATATAACACACT
GCTGAATATTCGAAATGAAATAAGAACACCCGGACACGTTATCCTCGCTG
CGCTTGCCTCTGAGGGTCGGTCTTACCAGGCCGAACCGGGCATCGAAGAT
CGAAAATCGAAAATCGAAAATCGAAAATGGCTCTCATTGGGCAACGTGCG
CTATTAGTTCTAAAGATTTTAAAAATCGGTCTTGTGTTTCGAGAAGCTTA
TGCTTTCCACGAAGTCAAAAGGATCAGCTGAATACATCGAAAATGCGGCC
AGAATTGACCAAGAGACCAAGGAGCAAGAGAGAGGCGGCTGCTGTGCTTT
CCGGGAGCACATCGGTGCACATCGACAAGCCTTTGCTTTGATGGTCACAG
CATCACGTCTAGACTCCGTTTGAACAAATGTGATCCTCTGAAGAAGGCTG
CTTACCACTAGAGTAGAGAGCACTTTTTTCCAGCGGCTTTTGGTGATAAT
CCGTAGAGCAGAGCGCTCAAATATGCAGCAGTATGTGGAACGTTGTTGGC
CACGGATGGTTACGGAGGAGTTGATAAAGCGGTCGGTGCTGCTGTGCATT
TTGGTAGCACGTCAGCCTGCTTTTACCGACGAAATCACACAAAGCTGGTA
TCCCCCAGAGTACCGAGTACTTGGTCTTAGCGGAGTCTGCTGAGCACTAA
CCGAGGAGCGCTCATCCGCGTGAAGTATCATTGCTCAAACGGTTGACTTT
GTGGGCTATGTGACCTCCAAACGGGTTTGCGTAGCTGAGCACTAACCGAG
GAGCGCTCATCCGCGTGAAGTATCATTGCTCAAACGGTTGACTTTGTGGG
CTATGTGACCTCCAAACGGGTTTGCGTAGGGTGTTCAACACGGAACAACA
CATTTATTGCAGCGTTCTTCGGTTATCGATCCCAAATAAAGCACTGCCAA
CTCGCCCGAGTCAGGCCGACGTGGGGCACTACCATGCGCTGCTTTAGAGG
CACGGTACGTAGCTGCACTAGTCTTGGATTCTTCACAGTATGCATTTCAC
GACTGTCTTATCTTCTGACTTGCTGGTCGTTCCTCCTCCTTTTTTTCTTT
TTTTTGGTGCTTCCGCTTTTTGGGTTGCGGCACCTCGGATACAACCCGCT
TTCCATCCCGGTTTTCGATTTTCGATGCGGACATTTTCTGTCAAGACCGA
CCCTGAGTATTGTGCCGGTACTTGCTTTTTTGTCTCAAGGCAGATATTTT
TGATCCCAGATTTTTCCGATGGATTTCCGATGCGGTCCGATGCATACATT
ATGGAAATGCATAGAAAGCCTCCGCACCACACAACCATAGCTTCCGCCCC
TCCTGGTCACCATACCGCCGCTGAAGCTGTAAGCCTGATGTATCTGGGCT
TCTCCACGATTGGTGTTTATTTTCGTGGGCTTGTTGTGTTTAGAGAAAGA
TCTACATATTTCCAAGGCAGCAAAACCTGTGCGAAAAAGTCCTTGCGCAA
GGTCTTTCATACACATGCTGGGCCCAATATCCGTGCGACTTGAACGCACG
GATTCGCTCACGGGTGTTAGCTCTTGCTAAGATGGGTCGATCATGCTCGA
CACACAAAACACCCACGACAAGTAAAACCAGATGCGGAAAAGCCCAGACA
TAGAAGTGGTACAGCCTCGTTGGTTGGCTGGCGATCCGGTGACGGTGAGA
GAAGGACGGTGTGGTCGTGTGGTTTTCGGTCAGTGTTTTTATGCTGGAGG
GGGCACAGTGAATGCACAAAAGTGGCACAGATTTTATTTCCGTGTGACAA
GAATCCGAACCCATAACATCCGGCCTCACGGGTAGGATTTACTCTGTGGG
CGTACCTGAATTCCCGCAACCCCCCCCCAAAAAAATATACACTGAACTTT
AAAAAATATATGTATACTGCTGCACGGGCCCCGTACATCGCATTTCCCCG
TCCAACGCATTTCTCGAGGAACAACGCAGATGCGAACTCCTGACCGCCTC
ACGGGCAATGTAGCACATGATTCCGCCCTGAGACATTCACCCAACGTGTA
GAATTGTTCTCTTGAGCATCTGTGACCATCCTGTTTCGCCATCGGTGCCT
GCAGCCGCAGACAATTTTCCCGAGGTTTTTCGACATATCGTCGACCGCAA
TCGACTGGCGTACTTGGCTTAGGGAGACAACCCGCATCTAAGGTCACCGA
GGCAACGAGGTCAACAGTTCAAGGGGAACGACCACTGTTCACTTCCGATG
ATGGGGTATCGTATCTTCAGAATCCGGATACAGGTTCGGAAATTTGGCTC
GTGGGGGTAGTTCACGGCAAGACCGCCAGCGTAGAGGTGAGAAGAGCGGA
GGACTCCGTCGTTACCTTTCACTGGTACGAGTTAACAGCAGCTGACGGTG
AACTGAAAACTTACGTGTGGCGATGCAACGACTGCTGGGTGGTTCTTAGA
TTTTGAACGGAAATAGTGTTGATTAATCAACACCAGTAGCCTCTTCGGTA
ATTTCGCCGTTCATGCGGGAGATTCAGAAAATGATTTTTTCTTACAGTGT
CAAAAGCGAGCCGTCGGCGACAAATTCAGGGCAGATTCGGCACGACGTAT
GTAAACTGACGTGCTAGTTTGGTTCAGGTCTGCTATAGCCATTACATGGC
AAACGTACCCCAGACGCACAAGTTGATATACTCCAGCGCAACCAGCCTAC
CGACGCTGTTTCCATCGTACCAAGCATGATCGTGGCAGCCGAATTCCCCC
AACGCTCTGAAATTACCAGCAAATAGTACTAGCGGCAATTGGGCAGCATG
CTCGGCCTATCATACGTTGTCTCTGACGATGCATACCATTATTCGTTTGG
GGTTTTGCTGCATTGGGCCCGCGTAAATCTCGTCCGGGCAGCTGTCGCAA
AGCGTGATCCGTGAGATCAAGCCGCAAGTCGTTGTGCTGGAGCTTGACGC
GTGCCGCCTCGATGACCTACCTCAAGGGACTTGGATGAAGGTCGGGGGGT
TTGTGTTGTCCTCGAGTTATGTATGCCTTTATTCAGACTCTTATCGGTAA
ATGACCACGTACCTTTCGCTGACATTTTGCCACGTTGATGGGTTGGGTAG
AAGACGTCTTTGTTTTTCGTTGGGTGCATTGTTGTTCAAAACTTCGTCAG
GGCCACTTGTCATGCCGTTGAAATGGTTCAACACTGCAGCCCCAGAAACA
TTTTGTGTCTGACGTACTTTTGGGATCATGCCGCTACACTGTCCTCTGAA
ATATGACCGTCACCGCTTTTTCGTTCTGGTTATCCCGATGTGCTCGTCGA
ATTATTCCGCAGACGGAAGATGGGCTTTGCTGGTTTATTCCGGAGAAAGA
AGCGGTGAGAGCGAGGCCTTCTTGCTGGCAGTGAAAGTGACAGTGTACGT
CGTAGGATCGCGTCAGGGTCTATGCTTGGCTCGACTATGAGGGGTTAGGC
TGCCATGCCACCTCATGCGCCGTGAATGGCAACAACGCTGGAACGATTCT
TGGTTGTTTATGGTACGAATACCATCTCTGTATCATACGTACAAAATACT
TCGAAGTATATATTTACAGGTGAAACACTTCTCAAGTACAAAATATATAT
CTACAGGTAAAACATTTCTCAAGTACGTGCGTTTGCGATACGATGACCCC
CCTTCCCAGTGGTCCGACCGGTAACAGGCTCGTTTCATCGCGGCCGCAGG
TCACCCAACACGGACTTGGCGAGACAGACAAAACAAGAAAGTCACAGATT
CACTGTCTCGCGCGACGCATAATTGTTTGTCGACCACAATTGACACTACT
CAACGCGCACCCCCGGTGAATCTTCCTCTAGGAAGAAACGGCTTCCGCTG
CTGCAAAGGGCGGGCGCGACAACGAGCTGCTGGACACCCTTGAATCAAAG
GAAGCTCCTTTCTCGATTGTGTCAGCCCTTGCGGCAAAACTGTTCAGGGA
GGCATTGGATGCTGTCGATCGCATGTTTGGTGAGAGCAATTCCGATCTTA
CCCGCCAGAATTGTATTCCGCCGCTGACGTTACTACGTGTGAGCCTAGCC
AAGGTGAGGGCGAGGAAAAGCTTCAATGGGATAAGTTAGTCGGCATGTCC
AATAGCAACGGCTCTTGGACGAGTACAACCTGACTACCTCTGATAAGAGA
AACTGGACTTGCACGGGGAAATGTGGATGTTTCATATTGGTTCATGTCGA
CCTGCCCTCGCCAAATTCCCCCCCGACGTATTACACTCCGAAGGAGAAGA
TATCAGCGAAATGGGCAGCGCTGTTCTTGCGGCACAAGCCTGCGGTGCTC
AGGTTCTTCTAGGGGACAGGGATTTCGAGGTACGACAACCGCGGATCTCG
CAACAGCCGGTGCAGGTGCGCATGGTTGCGGCGCCCTCCACACTGGTTGC
CCGCGTTGATAATGACCAGGTTGTTTATGTCGGTGTGAAACGGCAGGAGA
CCAAGCGCCGACTGGTCGCGGCTGGCCTCGTGGAAGATGTGGACGATGAA
CGATTGGACGACCCGGAAGCCTTGCTTCACGACTCCATGTCTCGGTCCGA
CAAGAAGGTCTTGGCGAGGTTACGCTTGAGGGTATGTTTCAACATGACTT
GGCTTTGGCTGTGTGGTATGAATATTGATCGGGTGAAAGATTGCATGCAA
AATGACTATTTTTCGTCTCCGGAGCGCTGAGCTTTGACCAGCGGTTGGTG
TAATGCTTGTAAACAGTACACACAATCGTTGCAACAAGTTTAGTTGGACA
GTAAGCTGTTTTTATGCCCCACTGCGATCTTTCTAGGTTGGGTATCCCTC
GCGTTCTGCCTTGCTCGGCAGTCGTGTATGTATGCCTTGGAAATACCTCG
GAAATACCTTGAATTATGCAATGCGGTGTGAAAGTGCATCATTATGCATC
CCCCTTGTCTCCCATGTGTCCCATACCATCAAGATCTTGGCTACCGTACG
ATCCGCACTTTTGTATGTTTCTTTCGTTTCATCTCGGTTACCAACCTCAC
GTAGGAAAAACGTGTTGTCAGGGCTGGAGTAAACCCTGGTCAATAATCGT
CTTGAGTGTAAGTAAACAGCAGTGCCGCCAAGGACCTGGGCAATGGCAGT
CAAGCTTTCGCGACATTCATGCTAGTGAAGATTTCGTCGCGAAACTGGCT
CAATCAAGATTGAGCAACGTACGGGATGTATTCTGGAGAATCTTGATGCG
TTCGTTGTGGGCCCATCTCAAAATGAACGTCGGAATCGACGATCAATGGC
ATACCGTCGTATTGTCTTCTTGATTCCTCCGCGTTGGATGGTGTATTTGG
GTGCGGCGTGCAGACGTTTCGGCAGTTGTAGCGCGTTGTACTGTCGCGAT
TGAAGGGTGTGCGCATTCTCTGCAAAACGTTTTTGGGATCTCTGAGCGGA
TAAGCGTTTCCCTTGTTATTTCTTTGCTGTTTCCGCCAATTTTGCCATCT
GGGGTCACCGGCCGGCAGGACCCAGAAACGCGTGAGACCGCCAGAGAGTA
CTATCGAGCCTTGGAATCATTGTGCGATAAGAGGGTGCTGAGCGCTATGA
TACCGGAACGAGACGAGGTGCCGTATGCGTAACTCTTCGTGAACCAACGT
TACAAAGTTGCGTTCGCCTTCAGTGCCTGACTACTGCCGCTGTTGTTGTG
GCTGGCACTGTTGTTTCTTTGTGGGACTCATTAGCTCCTGATCAAATCAT
CTGCGCTGTTCCTGTTGGCTAAAGCAAAAGGCCCAACAGCATGAAATCTG
TGTCGTCTTGCATATGGCTCATAAACCGGAGGGATTGTCTCGCCGTCCAA
GTTTCGGCTTTGTACAGTCGGAAAGTATGAATACAATACAGTTTTATCAT
GACGGTGTATGACGGTTCTCTGTCCTGCCTGTCGTCTTTACGCCCAGGTG
ATGGCGAGAAATCTCATGGCCCTGGAGGGAAACCAGATCACGGTTGCTCT
GGTCGGGGTCTTCCACGTGGATGGCATAGAAAGTATCTTGATGGAGAACG
GCTGGCAATTCTGGCAGTCGCCGGCGTTGGAGTGAGTCGGGACGGATCAT
CCCGCAAGCCTTGGTGGTTGTTACGCAGTCAGTAGTTTGAAAAAAAAAGA
AAGACAACCGTTGGTTCTGCCGGGATCTTCCTCGTTAACAACATCGAATG
GATAGTTTTTCAAACCTGTCCGAAACGTCAGCTGGGCTGGCGGCATTTGT
ATCGCCGTTGGTCGTCGGCCGGCCCATTGCAACCTCATCGGGGAAGCATT
CGCAGGCCAGGGTCGGCGATGCAGGTCTGGGCGAAGTCAAGTCGGCAGGA
GCTTCGCCGCTGCCGCCAGGATGCGAAAGCACGGGTGGTCGAAAATCGCT
GGAAAGCACACTGGTGATGGGCAGCGACCCTCGGGGCACAAGCGCGGTGG
TGCTTTGCACCAATTTTACTCGGTCATGAAACACCCTCCCTGGTACAGAA
CGGCGGGGTAGCCTTTCCAACTTTGTGGCAGGGGATCTTAGCGGAGTTGA
GACGCCCATCAACGGTTGGAGTGAAGGCAGTGTTCGGTCTTGCGGCATCG
GAGGGGTACGTTGGACAAACCACAGACTGCCTGCGGGTCTACATGAGTGC
CACGTGAACCTGAAGGAAAATGCTTGAGCGGTGTCGAGTCCTCGGAAAGA
TCAAGAGCTGGAAGTTGGGCCGACACCTTGAACAGGAAAGAACATCCAGC
CGAACGCCCTCTAGGGTGACAAGGAAACGATGGGAAACAAACTCTGAAAG
CCGTTGCGGTGTTGATTGACCACGTATCCACCAAAAGGGCAGGAGTGGTC
GAATTCTCGTCGTGTTTCACGAAAATGTTTGAAAAGCCGCGCGTCCATGG
GAGCTTGCGCGGTTGGGCGTAACCTGTGCAACTAGAGCGAGGCTAAGGCT
TCCAGAGGACGGAACGTCCTACTTCGAGTATGGCGAAAACATACGTAAAA
CAAACGTAGGTTAGGCCGTCGAGTAAGCAACCATACGTATTGAGGGCGGT
GGCTCTTGCCAAGAAGATTCAATATCTGTGACCAAGAGTCACGACAGGTG
AAGTCCCAACCCGGCAACCCCCCTTCTGTAGAAGTTGGGTTGGTATTTCC
ATGGCAAGAAATTGTATTGTACGGACGAGAGGCACTTAGTCGGGGCTCCT
TCATTGCGGAAGTGATTCCGATAGTGATGTTCGTCCTCCGCACACGCCAC
AGACCGCAAGATACGCGATTGTATCGGCTGTTTGGCAAAGGATGACAGCG
CAGTGGCGAGGGTCACAGCAATCGCC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig698:107813..122188-

>mRNA_P-littoralis_Contig698.20.9 ID=mRNA_P-littoralis_Contig698.20.9|Name=mRNA_P-littoralis_Contig698.20.9|organism=Pylaiella littoralis U1_48|type=CDS|length=1254bp|location=Sequence derived from alignment at P-littoralis_Contig698:107813..122188- (Pylaiella littoralis U1_48)
ATGGCGTGCAGGCAGCTTTTCCTGCTGGTGGTGTTCGTTTTTCTACCTGC
AGGCTCCTTTGTCGTGCTACCAACGCAGCATCTGACCAAAGTCCACCAAA
GAGGAACTCCTGAACTTGGGGCGAACATCTTGAAACCCGAGAGTGGGTTG
GCGACAGGCCGCAGACAATTTTCCCGAGGTTTTTCGACATATCGTCGACC
GCAATCGACTGGCGTACTTGGCTTAGGGAGACAACCCGCATCTAAGGTCA
CCGAGGCAACGAGGTCAACAGTTCAAGGGGAACGACCACTGTTCACTTCC
GATGATGGGGTATCGTATCTTCAGAATCCGGATACAGGTTCGGAAATTTG
GCTCGTGGGGGTAGTTCACGGCAAGACCGCCAGCGTAGAGCTGTCGCAAA
GCGTGATCCGTGAGATCAAGCCGCAAGTCGTTGTGCTGGAGCTTGACGCG
TGCCGCCTCGATGACCTACCTCAAGGGACTTGGATGAAGACGGAAGATGG
GCTTTGCTGGTTTATTCCGGAGAAAGAAGCGGAAGAAACGGCTTCCGCTG
CTGCAAAGGGCGGGCGCGACAACGAGCTGCTGGACACCCTTGAATCAAAG
GAAGCTCCTTTCTCGATTGTGTCAGCCCTTGCGGCAAAACTGTTCAGGGA
GGCATTGGATGCTGTCGATCGCATGTTTGGAGAAGATATCAGCGAAATGG
GCAGCGCTGTTCTTGCGGCACAAGCCTGCGGTGCTCAGGTTCTTCTAGGG
GACAGGGATTTCGAGGTACGACAACCGCGGATCTCGCAACAGCCGGTGCA
GGTGCGCATGGTTGCGGCGCCCTCCACACTGGTTGCCCGCGTTGATAATG
ACCAGGTTGTTTATGTCGGTGTGAAACGGCAGGAGACCAAGCGCCGACTG
GTCGCGGCTGGCCTCGTGGAAGATGTGGACGATGAACGATTGGACGACCC
GGAAGCCTTGCTTCACGACTCCATGTCTCGGTCCGACAAGAAGGTCTTGG
CGAGGTTACGCTTGAGGGACCCAGAAACGCGTGAGACCGCCAGAGAGTAC
TATCGAGCCTTGGAATCATTGTGCGATAAGAGGGTGCTGAGCGCTATGAT
ACCGGAACGAGACGAGGTGATGGCGAGAAATCTCATGGCCCTGGAGGGAA
ACCAGATCACGGTTGCTCTGGTCGGGGTCTTCCACGTGGATGGCATAGAA
AGTATCTTGATGGAGAACGGCTGGCAATTCTGGCAGTCGCCGGCGTTGGA
GTGA
back to top