prot_P-littoralis_Contig698.17.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig698.17.2
Unique Nameprot_P-littoralis_Contig698.17.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length323
Homology
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: D7FHB9_ECTSI (RPOLD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB9_ECTSI)

HSP 1 Score: 465 bits (1196), Expect = 1.350e-163
Identity = 232/259 (89.58%), Postives = 244/259 (94.21%), Query Frame = 0
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHGKQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKAR 259
            MPNLRAPQVEIVDLRED+VEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAAD G QYEYNYDCDCEDYC KCSAVFTLDVSW+KK+LGRPEHM+DQPV VTSADLV +DP LR VHFAPSDQTNSDISQDAGI+IAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEP+IEINEEKEALLTPEQKAEFVEICPAKVYGRDEK+GTIFVEHRDMCM+     YL + + +R
Sbjct:    1 MPNLRAPQVEIVDLREDFVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADPGVQYEYNYDCDCEDYCDKCSAVFTLDVSWDKKALGRPEHMQDQPVHVTSADLVSSDPRLRAVHFAPSDQTNSDISQDAGIIIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPVIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKSGTIFVEHRDMCMWRRTGRYLRRRWWSR 259          
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A835YK59_9STRA (Putative DNAdirected RNA polymerase II 36 kDa polypeptide A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK59_9STRA)

HSP 1 Score: 397 bits (1019), Expect = 8.400e-136
Identity = 195/312 (62.50%), Postives = 244/312 (78.21%), Query Frame = 0
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHGKQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRM 312
            MPN RAP++E+++L+ D+V+FVLS+TDTSVANALRRVMIAEVPTMAIDLVTI +NSS LQDEFL+HRLGL+PL  + G ++ YN DCDCED C +CS   +LDVSWE K+ GRP+H +D PV VTS+DLV  DP + PVHFA SD    D SQD GI++AKL++GQR+QLTAVAKKGIAKEHAKWSPV VATY+F+PII++ ++  A LT  Q+ + VE CP KVYG DE+T  I V +R  CMYCD+C  +A + K RPEDD VV +    DRFIFSVETNG+I A++VV  AL+ +S KL  LRN+L+ +
Sbjct:    1 MPNTRAPKIEVLELKADFVKFVLSDTDTSVANALRRVMIAEVPTMAIDLVTITENSSALQDEFLAHRLGLVPLRCEPGTKFVYNLDCDCEDNCEQCSVTLSLDVSWESKAAGRPDHEKDLPVFVTSSDLVSHDPRVGPVHFASSDII--DASQDDGIMLAKLSRGQRLQLTAVAKKGIAKEHAKWSPVCVATYQFDPIIKVADDVSATLTVAQRQQVVESCPVKVYGLDERTNNIVVRNRLECMYCDECTNVASSLKLRPEDDAVVTVTASQDRFIFSVETNGTIDADQVVQQALEALSLKLQTLRNELINV 310          
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A7S2Y381_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y381_9STRA)

HSP 1 Score: 330 bits (846), Expect = 2.970e-109
Identity = 164/310 (52.90%), Postives = 226/310 (72.90%), Query Frame = 0
Query:    5 RAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG--KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRM 312
            R P+V++ +LR+D + F LS+TD SVANALRRVMIAE PT+AIDLVTI  N+SV+QDEFL+HRLGLIP+    G   ++ +NYDCDCEDYCH+C+ +F+LDVS+++++  RP+H  D P+ VTS DLV  +P+++ VHFA +D+     SQDAGI + KLA+GQ ++LTA+AK G  KEH+KW    VATY+++PII++NEEK   L+ EQ  +  E CP  V+  DEKTG + V +R  CMYC++C  L  T KAR EDDP + I    + F+F+VETNG++ AEEVV++AL V+  KL +L+   M +
Sbjct:    6 RFPKVKVQELRDDCIRFELSDTDISVANALRRVMIAETPTLAIDLVTIETNTSVMQDEFLAHRLGLIPIRYHRGDVSKFRFNYDCDCEDYCHQCAVLFSLDVSFDQRAAMRPDHESDLPLTVTSQDLVSNNPDVQAVHFASADEQQQ--SQDAGIALLKLARGQAIKLTAIAKLGTQKEHSKWCTCCVATYQYDPIIKLNEEKLDQLSSEQVDQLAESCPVGVFEVDEKTGKLTVVNRMDCMYCEECTRLGDTMKARSEDDPFIDIHADTNVFLFTVETNGALLAEEVVLSALTVLGAKLRDLQMACMEI 313          
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A8K1CE06_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE06_PYTOL)

HSP 1 Score: 317 bits (811), Expect = 3.170e-104
Identity = 163/318 (51.26%), Postives = 224/318 (70.44%), Query Frame = 0
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG-----KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVL-VTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRM 312
            MPN R P++E+V+LR+D+++F LS TD SVANA+RRVMIAEVPT+AIDLVTI  N+SV+ DEFL+HRLG+IPL  D G     +++ Y+ DCDC+++C  CS  FTLDV            + DQ VL VTS  L  TDP +RP+HF+  ++ ++  +QD G++IAKL  GQR++L+A+AK GI KEHAKWSPVAVAT+ +EPII +N+     L+ +QKAE  + CPA+VY  DE    + V     CMYCD+CV +A ++K  PEDD  + IR R+D+FIFSVET G +  EEVV+ AL +I +KL +L++  + +
Sbjct:    1 MPNPRFPKIEVVELRDDFIKFELSETDASVANAIRRVMIAEVPTLAIDLVTIEANTSVMTDEFLAHRLGMIPLFFDGGLENFRQRFVYSQDCDCDEHCPNCSVEFTLDV------------VADQGVLTVTSESLRSTDPYIRPMHFSSEEEFSN--TQDTGVIIAKLGPGQRIKLSAIAKLGIGKEHAKWSPVAVATFMYEPIITLNQAVMNTLSSDQKAELYKSCPAEVYDTDENYDQLTVGDAMRCMYCDECVKVANSFKDNPEDDAALTIRMREDKFIFSVETCGQLRPEEVVICALDIIREKLSSLKHQCLEL 304          
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: K3W7V5_GLOUD (RPOLD domain-containing protein n=21 Tax=Oomycota TaxID=4762 RepID=K3W7V5_GLOUD)

HSP 1 Score: 311 bits (796), Expect = 6.130e-102
Identity = 161/322 (50.00%), Postives = 220/322 (68.32%), Query Frame = 0
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG-----KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVL-VTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRMGDGE 316
            MPN R P++EI +LR+D+++F LS TD SVANA+RRVMI+EVPT+AIDLV+I  N+SV+ DEFL+HRLG+IPL  D G     +++ Y+ DCDC+++C  CS  F LDV              DQ V+ VTS  L   DP +RPV+F+  ++ N+  +QD G++IAKL  GQR++L+A+AK GI KEHAKWSPVAVAT+ +EPII +N+   A  TPEQKAE  + CP +VY  DE      V     CMYCD+CV +A ++K  PEDD  V +R R+D+FIFSVET G +  EEVV+ AL +I +KL +L++  + +   +
Sbjct:    1 MPNPRFPKIEIQELRDDFIKFELSETDASVANAIRRVMISEVPTLAIDLVSIEVNTSVMTDEFLAHRLGMIPLYFDGGLENFRQRFVYSQDCDCDEHCPNCSVEFQLDVR------------ADQGVMTVTSEALKSLDPYIRPVNFSSEEELNN--TQDTGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATFMYEPIITLNQAVLATYTPEQKAELYKSCPTEVYETDENYDQFTVGDSMRCMYCDECVKVADSFKDNPEDDAAVSVRMREDKFIFSVETTGQLRPEEVVICALDLIREKLSSLKHQCLELSQDD 308          
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: W4FWZ6_9STRA (RPOLD domain-containing protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FWZ6_9STRA)

HSP 1 Score: 309 bits (792), Expect = 2.560e-101
Identity = 157/321 (48.91%), Postives = 214/321 (66.67%), Query Frame = 0
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG-----KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRMGDGE 316
            MPN R P++++ ++R+D+++F LS TDTSVANA+RRVMIAEVPT+AIDLV+I  N+SV+ DEFL+HRLG+IPL  + G     K++ Y+ DCDC+++C  CS  F LDV  E  +             VTS  L   DP ++PVHF+  ++ N+  +QD G++IAKL  GQR++L A+AK GI KEHAKWSPVAVATY FEPII +N+      T EQ+ E  + CP +V+  D+   T+ VE    CMYCD+CV LA +Y+  PEDD  V +    D+FIFSVET G +  EEVV+ AL +I DKL  L++  + +   E
Sbjct:    1 MPNTRFPKIDLQEIRDDFIKFELSETDTSVANAIRRVMIAEVPTLAIDLVSIEVNTSVITDEFLAHRLGMIPLRLEGGLEAFKKRFVYSADCDCDEHCPNCSVEFELDVRAESGTQ-----------TVTSDSLRSLDPYIKPVHFSSEEEANN--TQDTGVIIAKLGPGQRLKLNAIAKLGIGKEHAKWSPVAVATYMFEPIITLNQNVLNTYTSEQRVELYKSCPTRVFEIDDTYDTLQVEDNMRCMYCDECVKLASSYRENPEDDMAVTVTATQDKFIFSVETTGQLKPEEVVIWALDIIKDKLAALKHQCLELSQDE 308          
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A067CJB5_SAPPC (RNA polymerase Rpb3/Rpb11 dimeriZation domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJB5_SAPPC)

HSP 1 Score: 307 bits (786), Expect = 2.070e-100
Identity = 160/325 (49.23%), Postives = 217/325 (66.77%), Query Frame = 0
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG-----KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRMGDGEPWKS 320
            MP+ R P+++I +LR+D+++F LS TDTSVAN++RRVMIAEVPT+AIDLV+I  N+SV+ DEFL+HRLG+IPLA D G     K++ Y+ DCDC+++C  CS  F LDV  E                VTS  L   DP + PVHF+  ++ N+  +QD+G++IAKL  GQR++L A+AK GI KEHAKWSPVAVATY FEPII +N++  +  T EQ+ E  + CP +V+  D+    I VE    CMYCD+CV LA++Y   PEDD  V +    D+FIFSVET G +  EEVV+ AL +I DKL +L++  + +   E   S
Sbjct:    1 MPHPRFPKIDIQELRDDFIKFELSETDTSVANSIRRVMIAEVPTLAIDLVSIEINTSVITDEFLAHRLGMIPLAFDGGLEGFKKRFVYSADCDCDEHCPHCSVEFELDVRAESGMQ-----------TVTSQSLRSLDPYVHPVHFSSEEELNN--TQDSGVIIAKLGPGQRLKLNALAKLGIGKEHAKWSPVAVATYMFEPIITLNQKVLSTYTNEQRVELYKSCPTRVFEIDDTYDQIQVEDHMRCMYCDECVKLAESYLENPEDDAAVTVTMTPDKFIFSVETTGQLKPEEVVICALDIIKDKLSSLKHQCLELSQDEGMTS 312          
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A024G378_9STRA (RPOLD domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024G378_9STRA)

HSP 1 Score: 306 bits (784), Expect = 3.890e-100
Identity = 159/317 (50.16%), Postives = 216/317 (68.14%), Query Frame = 0
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG-----KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRM 312
            MPN + P+VEI+DLR+D+++F L  TD SVANALRRVMIAEVPT+AIDLVTI  N+SV+ DEFL+HRLG+IPL  D G     +++ Y+ DCDCE++C  CS  F LDV  E+  L            VTS  L   DP +RPV+F+  ++ N+  +QD G++IAKL  GQ ++L+A+AK GI KEHAKWSPVAVAT+ +EP I +N+   +  TPEQKAE  + CP +VY  DE      + +   CMYCD+CV +A +YK  PEDD  V ++ ++D+FIFSVET G +  EEVV+ AL +I +KL  L++  + +
Sbjct:    1 MPNPQFPKVEILDLRDDFIKFELFETDASVANALRRVMIAEVPTLAIDLVTIEINTSVMTDEFLAHRLGMIPLFFDGGLEAFRQRFVYSQDCDCEEHCPNCSVEFQLDVRAEQGMLS-----------VTSDALKSVDPYIRPVNFSSEEEFNN--TQDTGVIIAKLGPGQHIRLSAIAKLGIGKEHAKWSPVAVATFMYEPKITLNQAILSTYTPEQKAELYKSCPTEVYETDENYEQFTIANHMRCMYCDECVKVANSYKDNPEDDAAVTVQMQEDKFIFSVETTGQLKPEEVVICALDMIREKLSYLKHQCLEL 304          
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A484DTY5_BRELC (RPOLD domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTY5_BRELC)

HSP 1 Score: 307 bits (786), Expect = 3.000e-97
Identity = 158/321 (49.22%), Postives = 221/321 (68.85%), Query Frame = 0
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG-----KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRMGDGE 316
            MP+ R P++EI +LR+D++ F LS TD SVANA+RRVMIAEVPT+AIDLV+I  N+SV+ DEFL+HRLG+IPL  D G     +++ Y+ DCDC++ C  CS  F+LDV+ +   L            VTS  L  +DP +RPV+F+  ++ N+  +QD+G++IAKL  GQR++L+A+AK GI KEHAKWSPVAVATY ++PII +N+   +  TPEQKAE  + CP +V+  DE    + V     CMYCD+CV LA ++K  PEDD  V I+ R+D+FIFSVET G +  EEVV+ AL +I +KL +L++  + +   +
Sbjct:  245 MPHPRFPKIEIQELRDDFIRFELSETDPSVANAIRRVMIAEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNFDGGLENFRQRFVYSQDCDCDENCPNCSVEFSLDVTADSGVLS-----------VTSEALKSSDPYIRPVNFSSEEELNN--TQDSGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATYMYDPIITLNQAVLSSYTPEQKAELYKSCPTEVFETDENYEQLTVGDPMRCMYCDECVKLADSFKDNPEDDSAVSIKMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQDD 552          
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A2P4YFS8_9STRA (DNA-directed RNA polymerase II n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YFS8_9STRA)

HSP 1 Score: 303 bits (776), Expect = 5.850e-91
Identity = 156/321 (48.60%), Postives = 219/321 (68.22%), Query Frame = 0
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAAD-----HGKQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRMGDGE 316
            MP+ R P++EI +LR+D++ F LS TD SVANA+RRVMI+EVPT+AIDLV+I  N+SV+ DEFL+HRLG+IPL  D       +++ Y+ DCDC++ C  CS  F+LDV+ +   L            VTS  L  +DP +RPV+F+  ++ N+  +QD+G++IAKL  GQR++L+A+AK GI KEHAKWSPVAVAT+ ++PII +N+   +  +PEQKAE  + CP +V+  DE      V     CMYCD+CV LA ++K  PEDD  V IR R+D+FIFSVET G +  EEVV+ AL +I +KL +L++  + +   E
Sbjct:  835 MPHPRFPKIEIQELRDDFIRFELSETDASVANAIRRVMISEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNFDGRLENFRQRFVYSQDCDCDENCPNCSVEFSLDVTADNGVLS-----------VTSEALKSSDPYIRPVNFSSEEELNN--TQDSGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATFMYDPIITLNQAVLSTYSPEQKAELYKCCPTEVFETDENYEQFTVGDAMRCMYCDECVKLADSFKDNPEDDSAVSIRMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQDE 1142          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHB9_ECTSI1.350e-16389.58RPOLD domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YK59_9STRA8.400e-13662.50Putative DNAdirected RNA polymerase II 36 kDa poly... [more]
A0A7S2Y381_9STRA2.970e-10952.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1CE06_PYTOL3.170e-10451.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3W7V5_GLOUD6.130e-10250.00RPOLD domain-containing protein n=21 Tax=Oomycota ... [more]
W4FWZ6_9STRA2.560e-10148.91RPOLD domain-containing protein n=8 Tax=Aphanomyce... [more]
A0A067CJB5_SAPPC2.070e-10049.23RNA polymerase Rpb3/Rpb11 dimeriZation domain-cont... [more]
A0A024G378_9STRA3.890e-10050.16RPOLD domain-containing protein n=2 Tax=Albugo Tax... [more]
A0A484DTY5_BRELC3.000e-9749.22RPOLD domain-containing protein n=1 Tax=Bremia lac... [more]
A0A2P4YFS8_9STRA5.850e-9148.60DNA-directed RNA polymerase II n=1 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typeSMARTSM00662rpoldneu2coord: 18..308
e-value: 4.1E-69
score: 245.6
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typePFAMPF01193RNA_pol_Lcoord: 20..302
e-value: 6.4E-23
score: 80.9
IPR036603RNA polymerase, RBP11-like subunitGENE3D3.30.1360.10coord: 9..301
e-value: 9.5E-85
score: 286.3
IPR036603RNA polymerase, RBP11-like subunitSUPERFAMILY55257RBP11-like subunits of RNA polymerasecoord: 6..309
IPR036643DNA-directed RNA polymerase, insert domain superfamilyGENE3D2.170.120.12coord: 44..183
e-value: 9.5E-85
score: 286.3
IPR036643DNA-directed RNA polymerase, insert domain superfamilySUPERFAMILY56553Insert subdomain of RNA polymerase alpha subunitcoord: 43..187
IPR011262DNA-directed RNA polymerase, insert domainPFAMPF01000RNA_pol_A_baccoord: 50..186
e-value: 1.1E-27
score: 96.7
NoneNo IPR availablePANTHERPTHR11800:SF2DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3coord: 1..310
NoneNo IPR availablePANTHERPTHR11800DNA-DIRECTED RNA POLYMERASEcoord: 1..310
IPR001514DNA-directed RNA polymerase, 30-40kDa subunit, conserved sitePROSITEPS00446RNA_POL_D_30KDcoord: 32..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig698contigP-littoralis_Contig698:63495..72085 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig698.17.2mRNA_P-littoralis_Contig698.17.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig698 62238..72085 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig698.17.2 ID=prot_P-littoralis_Contig698.17.2|Name=mRNA_P-littoralis_Contig698.17.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=323bp
MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLV
TIHDNSSVLQDEFLSHRLGLIPLAADHGKQYEYNYDCDCEDYCHKCSAVF
TLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSD
ISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIE
INEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCV
YLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISD
KLLNLRNDLMRMGDGEPWKSGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011263DNA-dir_RNA_pol_RpoA/D/Rpb3
IPR036603RBP11-like
IPR036643RNApol_insert_sf
IPR011262DNA-dir_RNA_pol_insert
IPR001514DNA-dir_RNA_pol_30-40kDasu_CS