mRNA_P-littoralis_Contig698.17.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig698.17.2
Unique NamemRNA_P-littoralis_Contig698.17.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: D7FHB9_ECTSI (RPOLD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB9_ECTSI)

HSP 1 Score: 465 bits (1196), Expect = 2.900e-157
Identity = 232/259 (89.58%), Postives = 244/259 (94.21%), Query Frame = 1 
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHGKQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKAR 777
            MPNLRAPQVEIVDLRED+VEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAAD G QYEYNYDCDCEDYC KCSAVFTLDVSW+KK+LGRPEHM+DQPV VTSADLV +DP LR VHFAPSDQTNSDISQDAGI+IAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEP+IEINEEKEALLTPEQKAEFVEICPAKVYGRDEK+GTIFVEHRDMCM+     YL + + +R
Sbjct:    1 MPNLRAPQVEIVDLREDFVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADPGVQYEYNYDCDCEDYCDKCSAVFTLDVSWDKKALGRPEHMQDQPVHVTSADLVSSDPRLRAVHFAPSDQTNSDISQDAGIIIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPVIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKSGTIFVEHRDMCMWRRTGRYLRRRWWSR 259
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BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A835YK59_9STRA (Putative DNAdirected RNA polymerase II 36 kDa polypeptide A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK59_9STRA)

HSP 1 Score: 397 bits (1019), Expect = 8.890e-130
Identity = 195/312 (62.50%), Postives = 244/312 (78.21%), Query Frame = 1 
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHGKQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRM 936
            MPN RAP++E+++L+ D+V+FVLS+TDTSVANALRRVMIAEVPTMAIDLVTI +NSS LQDEFL+HRLGL+PL  + G ++ YN DCDCED C +CS   +LDVSWE K+ GRP+H +D PV VTS+DLV  DP + PVHFA SD    D SQD GI++AKL++GQR+QLTAVAKKGIAKEHAKWSPV VATY+F+PII++ ++  A LT  Q+ + VE CP KVYG DE+T  I V +R  CMYCD+C  +A + K RPEDD VV +    DRFIFSVETNG+I A++VV  AL+ +S KL  LRN+L+ +
Sbjct:    1 MPNTRAPKIEVLELKADFVKFVLSDTDTSVANALRRVMIAEVPTMAIDLVTITENSSALQDEFLAHRLGLVPLRCEPGTKFVYNLDCDCEDNCEQCSVTLSLDVSWESKAAGRPDHEKDLPVFVTSSDLVSHDPRVGPVHFASSDII--DASQDDGIMLAKLSRGQRLQLTAVAKKGIAKEHAKWSPVCVATYQFDPIIKVADDVSATLTVAQRQQVVESCPVKVYGLDERTNNIVVRNRLECMYCDECTNVASSLKLRPEDDAVVTVTASQDRFIFSVETNGTIDADQVVQQALEALSLKLQTLRNELINV 310
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BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A7S2Y381_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y381_9STRA)

HSP 1 Score: 330 bits (846), Expect = 1.180e-103
Identity = 164/310 (52.90%), Postives = 226/310 (72.90%), Query Frame = 1 
Query:   13 RAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG--KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRM 936
            R P+V++ +LR+D + F LS+TD SVANALRRVMIAE PT+AIDLVTI  N+SV+QDEFL+HRLGLIP+    G   ++ +NYDCDCEDYCH+C+ +F+LDVS+++++  RP+H  D P+ VTS DLV  +P+++ VHFA +D+     SQDAGI + KLA+GQ ++LTA+AK G  KEH+KW    VATY+++PII++NEEK   L+ EQ  +  E CP  V+  DEKTG + V +R  CMYC++C  L  T KAR EDDP + I    + F+F+VETNG++ AEEVV++AL V+  KL +L+   M +
Sbjct:    6 RFPKVKVQELRDDCIRFELSDTDISVANALRRVMIAETPTLAIDLVTIETNTSVMQDEFLAHRLGLIPIRYHRGDVSKFRFNYDCDCEDYCHQCAVLFSLDVSFDQRAAMRPDHESDLPLTVTSQDLVSNNPDVQAVHFASADEQQQ--SQDAGIALLKLARGQAIKLTAIAKLGTQKEHSKWCTCCVATYQYDPIIKLNEEKLDQLSSEQVDQLAESCPVGVFEVDEKTGKLTVVNRMDCMYCEECTRLGDTMKARSEDDPFIDIHADTNVFLFTVETNGALLAEEVVLSALTVLGAKLRDLQMACMEI 313
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BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A8K1CE06_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE06_PYTOL)

HSP 1 Score: 317 bits (811), Expect = 9.800e-99
Identity = 163/318 (51.26%), Postives = 224/318 (70.44%), Query Frame = 1 
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG-----KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVL-VTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRM 936
            MPN R P++E+V+LR+D+++F LS TD SVANA+RRVMIAEVPT+AIDLVTI  N+SV+ DEFL+HRLG+IPL  D G     +++ Y+ DCDC+++C  CS  FTLDV            + DQ VL VTS  L  TDP +RP+HF+  ++ ++  +QD G++IAKL  GQR++L+A+AK GI KEHAKWSPVAVAT+ +EPII +N+     L+ +QKAE  + CPA+VY  DE    + V     CMYCD+CV +A ++K  PEDD  + IR R+D+FIFSVET G +  EEVV+ AL +I +KL +L++  + +
Sbjct:    1 MPNPRFPKIEVVELRDDFIKFELSETDASVANAIRRVMIAEVPTLAIDLVTIEANTSVMTDEFLAHRLGMIPLFFDGGLENFRQRFVYSQDCDCDEHCPNCSVEFTLDV------------VADQGVLTVTSESLRSTDPYIRPMHFSSEEEFSN--TQDTGVIIAKLGPGQRIKLSAIAKLGIGKEHAKWSPVAVATFMYEPIITLNQAVMNTLSSDQKAELYKSCPAEVYDTDENYDQLTVGDAMRCMYCDECVKVANSFKDNPEDDAALTIRMREDKFIFSVETCGQLRPEEVVICALDIIREKLSSLKHQCLEL 304
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BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: K3W7V5_GLOUD (RPOLD domain-containing protein n=21 Tax=Oomycota TaxID=4762 RepID=K3W7V5_GLOUD)

HSP 1 Score: 311 bits (796), Expect = 1.690e-96
Identity = 161/322 (50.00%), Postives = 220/322 (68.32%), Query Frame = 1 
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG-----KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVL-VTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRMGDGE 948
            MPN R P++EI +LR+D+++F LS TD SVANA+RRVMI+EVPT+AIDLV+I  N+SV+ DEFL+HRLG+IPL  D G     +++ Y+ DCDC+++C  CS  F LDV              DQ V+ VTS  L   DP +RPV+F+  ++ N+  +QD G++IAKL  GQR++L+A+AK GI KEHAKWSPVAVAT+ +EPII +N+   A  TPEQKAE  + CP +VY  DE      V     CMYCD+CV +A ++K  PEDD  V +R R+D+FIFSVET G +  EEVV+ AL +I +KL +L++  + +   +
Sbjct:    1 MPNPRFPKIEIQELRDDFIKFELSETDASVANAIRRVMISEVPTLAIDLVSIEVNTSVMTDEFLAHRLGMIPLYFDGGLENFRQRFVYSQDCDCDEHCPNCSVEFQLDVR------------ADQGVMTVTSEALKSLDPYIRPVNFSSEEELNN--TQDTGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATFMYEPIITLNQAVLATYTPEQKAELYKSCPTEVYETDENYDQFTVGDSMRCMYCDECVKVADSFKDNPEDDAAVSVRMREDKFIFSVETTGQLRPEEVVICALDLIREKLSSLKHQCLELSQDD 308
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BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: W4FWZ6_9STRA (RPOLD domain-containing protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FWZ6_9STRA)

HSP 1 Score: 309 bits (792), Expect = 6.840e-96
Identity = 157/321 (48.91%), Postives = 214/321 (66.67%), Query Frame = 1 
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG-----KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRMGDGE 948
            MPN R P++++ ++R+D+++F LS TDTSVANA+RRVMIAEVPT+AIDLV+I  N+SV+ DEFL+HRLG+IPL  + G     K++ Y+ DCDC+++C  CS  F LDV  E  +             VTS  L   DP ++PVHF+  ++ N+  +QD G++IAKL  GQR++L A+AK GI KEHAKWSPVAVATY FEPII +N+      T EQ+ E  + CP +V+  D+   T+ VE    CMYCD+CV LA +Y+  PEDD  V +    D+FIFSVET G +  EEVV+ AL +I DKL  L++  + +   E
Sbjct:    1 MPNTRFPKIDLQEIRDDFIKFELSETDTSVANAIRRVMIAEVPTLAIDLVSIEVNTSVITDEFLAHRLGMIPLRLEGGLEAFKKRFVYSADCDCDEHCPNCSVEFELDVRAESGTQ-----------TVTSDSLRSLDPYIKPVHFSSEEEANN--TQDTGVIIAKLGPGQRLKLNAIAKLGIGKEHAKWSPVAVATYMFEPIITLNQNVLNTYTSEQRVELYKSCPTRVFEIDDTYDTLQVEDNMRCMYCDECVKLASSYRENPEDDMAVTVTATQDKFIFSVETTGQLKPEEVVIWALDIIKDKLAALKHQCLELSQDE 308
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BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A067CJB5_SAPPC (RNA polymerase Rpb3/Rpb11 dimeriZation domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJB5_SAPPC)

HSP 1 Score: 306 bits (785), Expect = 7.430e-95
Identity = 159/321 (49.53%), Postives = 216/321 (67.29%), Query Frame = 1 
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG-----KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRMGDGE 948
            MP+ R P+++I +LR+D+++F LS TDTSVAN++RRVMIAEVPT+AIDLV+I  N+SV+ DEFL+HRLG+IPLA D G     K++ Y+ DCDC+++C  CS  F LDV  E                VTS  L   DP + PVHF+  ++ N+  +QD+G++IAKL  GQR++L A+AK GI KEHAKWSPVAVATY FEPII +N++  +  T EQ+ E  + CP +V+  D+    I VE    CMYCD+CV LA++Y   PEDD  V +    D+FIFSVET G +  EEVV+ AL +I DKL +L++  + +   E
Sbjct:    1 MPHPRFPKIDIQELRDDFIKFELSETDTSVANSIRRVMIAEVPTLAIDLVSIEINTSVITDEFLAHRLGMIPLAFDGGLEGFKKRFVYSADCDCDEHCPHCSVEFELDVRAESGMQ-----------TVTSQSLRSLDPYVHPVHFSSEEELNN--TQDSGVIIAKLGPGQRLKLNALAKLGIGKEHAKWSPVAVATYMFEPIITLNQKVLSTYTNEQRVELYKSCPTRVFEIDDTYDQIQVEDHMRCMYCDECVKLAESYLENPEDDAAVTVTMTPDKFIFSVETTGQLKPEEVVICALDIIKDKLSSLKHQCLELSQDE 308
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BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A024G378_9STRA (RPOLD domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024G378_9STRA)

HSP 1 Score: 306 bits (784), Expect = 9.780e-95
Identity = 159/317 (50.16%), Postives = 216/317 (68.14%), Query Frame = 1 
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG-----KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRM 936
            MPN + P+VEI+DLR+D+++F L  TD SVANALRRVMIAEVPT+AIDLVTI  N+SV+ DEFL+HRLG+IPL  D G     +++ Y+ DCDCE++C  CS  F LDV  E+  L            VTS  L   DP +RPV+F+  ++ N+  +QD G++IAKL  GQ ++L+A+AK GI KEHAKWSPVAVAT+ +EP I +N+   +  TPEQKAE  + CP +VY  DE      + +   CMYCD+CV +A +YK  PEDD  V ++ ++D+FIFSVET G +  EEVV+ AL +I +KL  L++  + +
Sbjct:    1 MPNPQFPKVEILDLRDDFIKFELFETDASVANALRRVMIAEVPTLAIDLVTIEINTSVMTDEFLAHRLGMIPLFFDGGLEAFRQRFVYSQDCDCEEHCPNCSVEFQLDVRAEQGMLS-----------VTSDALKSVDPYIRPVNFSSEEEFNN--TQDTGVIIAKLGPGQHIRLSAIAKLGIGKEHAKWSPVAVATFMYEPKITLNQAILSTYTPEQKAELYKSCPTEVYETDENYEQFTIANHMRCMYCDECVKVANSYKDNPEDDAAVTVQMQEDKFIFSVETTGQLKPEEVVICALDMIREKLSYLKHQCLEL 304
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BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A484DTY5_BRELC (RPOLD domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTY5_BRELC)

HSP 1 Score: 307 bits (786), Expect = 7.680e-92
Identity = 158/321 (49.22%), Postives = 221/321 (68.85%), Query Frame = 1 
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADHG-----KQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRMGDGE 948
            MP+ R P++EI +LR+D++ F LS TD SVANA+RRVMIAEVPT+AIDLV+I  N+SV+ DEFL+HRLG+IPL  D G     +++ Y+ DCDC++ C  CS  F+LDV+ +   L            VTS  L  +DP +RPV+F+  ++ N+  +QD+G++IAKL  GQR++L+A+AK GI KEHAKWSPVAVATY ++PII +N+   +  TPEQKAE  + CP +V+  DE    + V     CMYCD+CV LA ++K  PEDD  V I+ R+D+FIFSVET G +  EEVV+ AL +I +KL +L++  + +   +
Sbjct:  245 MPHPRFPKIEIQELRDDFIRFELSETDPSVANAIRRVMIAEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNFDGGLENFRQRFVYSQDCDCDENCPNCSVEFSLDVTADSGVLS-----------VTSEALKSSDPYIRPVNFSSEEELNN--TQDSGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATYMYDPIITLNQAVLSSYTPEQKAELYKSCPTEVFETDENYEQLTVGDPMRCMYCDECVKLADSFKDNPEDDSAVSIKMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQDD 552
[Close]
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Match: A0A2P4YFS8_9STRA (DNA-directed RNA polymerase II n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YFS8_9STRA)

HSP 1 Score: 303 bits (776), Expect = 1.410e-85
Identity = 156/321 (48.60%), Postives = 219/321 (68.22%), Query Frame = 1 
Query:    1 MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAAD-----HGKQYEYNYDCDCEDYCHKCSAVFTLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISDKLLNLRNDLMRMGDGE 948
            MP+ R P++EI +LR+D++ F LS TD SVANA+RRVMI+EVPT+AIDLV+I  N+SV+ DEFL+HRLG+IPL  D       +++ Y+ DCDC++ C  CS  F+LDV+ +   L            VTS  L  +DP +RPV+F+  ++ N+  +QD+G++IAKL  GQR++L+A+AK GI KEHAKWSPVAVAT+ ++PII +N+   +  +PEQKAE  + CP +V+  DE      V     CMYCD+CV LA ++K  PEDD  V IR R+D+FIFSVET G +  EEVV+ AL +I +KL +L++  + +   E
Sbjct:  835 MPHPRFPKIEIQELRDDFIRFELSETDASVANAIRRVMISEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNFDGRLENFRQRFVYSQDCDCDENCPNCSVEFSLDVTADNGVLS-----------VTSEALKSSDPYIRPVNFSSEEELNN--TQDSGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATFMYDPIITLNQAVLSTYSPEQKAELYKCCPTEVFETDENYEQFTVGDAMRCMYCDECVKLADSFKDNPEDDSAVSIRMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQDE 1142
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig698.17.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHB9_ECTSI2.900e-15789.58RPOLD domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YK59_9STRA8.890e-13062.50Putative DNAdirected RNA polymerase II 36 kDa poly... [more]
A0A7S2Y381_9STRA1.180e-10352.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1CE06_PYTOL9.800e-9951.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3W7V5_GLOUD1.690e-9650.00RPOLD domain-containing protein n=21 Tax=Oomycota ... [more]
W4FWZ6_9STRA6.840e-9648.91RPOLD domain-containing protein n=8 Tax=Aphanomyce... [more]
A0A067CJB5_SAPPC7.430e-9549.53RNA polymerase Rpb3/Rpb11 dimeriZation domain-cont... [more]
A0A024G378_9STRA9.780e-9550.16RPOLD domain-containing protein n=2 Tax=Albugo Tax... [more]
A0A484DTY5_BRELC7.680e-9249.22RPOLD domain-containing protein n=1 Tax=Bremia lac... [more]
A0A2P4YFS8_9STRA1.410e-8548.60DNA-directed RNA polymerase II n=1 Tax=Phytophthor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig698contigP-littoralis_Contig698:62238..72085 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FHB9
Preferred namePOLR2C
PFAMsRNA_pol_A_bac,RNA_pol_L
Model size2226
Max annot lvl2759|Eukaryota
KEGG rclassRC02795
KEGG koko:K01366,ko:K03011,ko:K07441,ko:K13457
KEGG ReactionR00435,R00441,R00442,R00443,R05970
KEGG Pathwayko00230,ko00240,ko00510,ko00513,ko01100,ko03020,ko04142,ko04210,ko04626,ko05016,ko05169,map00230,map00240,map00510,map00513,map01100,map03020,map04142,map04210,map04626,map05016,map05169
KEGG ModuleM00055,M00180
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000375,GO:0000377,GO:0000398,GO:0000418,GO:0000419,GO:0000428,GO:0000785,GO:0000790,GO:0003002,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005694,GO:0005700,GO:0005703,GO:0005730,GO:0005737,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006366,GO:0006367,GO:0006368,GO:0006369,GO:0006370,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007389,GO:0008150,GO:0008152,GO:0008380,GO:0008543,GO:0009058,GO:0009059,GO:0009266,GO:0009301,GO:0009408,GO:0009452,GO:0009628,GO:0009719,GO:0009791,GO:0009888,GO:0009987,GO:0010033,GO:0010374,GO:0010375,GO:0010467,GO:0010468,GO:0015630,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0023052,GO:0030880,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034605,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036260,GO:0042221,GO:0042795,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0046483,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055029,GO:0060147,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0090304,GO:0090558,GO:0097659,GO:0097747,GO:0098687,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
Exons10
Evalue2.21e-164
EggNOG OGsCOG0202@1|root,KOG1522@2759|Eukaryota
EC2.4.1.141,3.4.22.16
DescriptionDNA-directed 5'-3' RNA polymerase activity
Cds size969
COG categoryK
CAZyGT1
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko01002,ko01003,ko03021,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig698.17.2prot_P-littoralis_Contig698.17.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig698 63495..72085 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791444.008376-UTR-P-littoralis_Contig698:62237..634941680791444.008376-UTR-P-littoralis_Contig698:62237..63494Pylaiella littoralis U1_48UTRP-littoralis_Contig698 62238..63494 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791444.0259266-CDS-P-littoralis_Contig698:63494..635751680791444.0259266-CDS-P-littoralis_Contig698:63494..63575Pylaiella littoralis U1_48CDSP-littoralis_Contig698 63495..63575 -
1680791444.0357459-CDS-P-littoralis_Contig698:64040..640931680791444.0357459-CDS-P-littoralis_Contig698:64040..64093Pylaiella littoralis U1_48CDSP-littoralis_Contig698 64041..64093 -
1680791444.0455995-CDS-P-littoralis_Contig698:64462..645651680791444.0455995-CDS-P-littoralis_Contig698:64462..64565Pylaiella littoralis U1_48CDSP-littoralis_Contig698 64463..64565 -
1680791444.0569627-CDS-P-littoralis_Contig698:65198..652581680791444.0569627-CDS-P-littoralis_Contig698:65198..65258Pylaiella littoralis U1_48CDSP-littoralis_Contig698 65199..65258 -
1680791444.068393-CDS-P-littoralis_Contig698:65780..659591680791444.068393-CDS-P-littoralis_Contig698:65780..65959Pylaiella littoralis U1_48CDSP-littoralis_Contig698 65781..65959 -
1680791444.0780375-CDS-P-littoralis_Contig698:66881..669781680791444.0780375-CDS-P-littoralis_Contig698:66881..66978Pylaiella littoralis U1_48CDSP-littoralis_Contig698 66882..66978 -
1680791444.088948-CDS-P-littoralis_Contig698:67146..672871680791444.088948-CDS-P-littoralis_Contig698:67146..67287Pylaiella littoralis U1_48CDSP-littoralis_Contig698 67147..67287 -
1680791444.099843-CDS-P-littoralis_Contig698:67502..676341680791444.099843-CDS-P-littoralis_Contig698:67502..67634Pylaiella littoralis U1_48CDSP-littoralis_Contig698 67503..67634 -
1680791444.1138592-CDS-P-littoralis_Contig698:68424..685231680791444.1138592-CDS-P-littoralis_Contig698:68424..68523Pylaiella littoralis U1_48CDSP-littoralis_Contig698 68425..68523 -
1680791444.1256742-CDS-P-littoralis_Contig698:72061..720851680791444.1256742-CDS-P-littoralis_Contig698:72061..72085Pylaiella littoralis U1_48CDSP-littoralis_Contig698 72062..72085 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig698.17.2

>prot_P-littoralis_Contig698.17.2 ID=prot_P-littoralis_Contig698.17.2|Name=mRNA_P-littoralis_Contig698.17.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=323bp
MPNLRAPQVEIVDLREDYVEFVLSNTDTSVANALRRVMIAEVPTMAIDLV
TIHDNSSVLQDEFLSHRLGLIPLAADHGKQYEYNYDCDCEDYCHKCSAVF
TLDVSWEKKSLGRPEHMRDQPVLVTSADLVGTDPELRPVHFAPSDQTNSD
ISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIE
INEEKEALLTPEQKAEFVEICPAKVYGRDEKTGTIFVEHRDMCMYCDDCV
YLAKTYKARPEDDPVVKIRPRDDRFIFSVETNGSITAEEVVVTALKVISD
KLLNLRNDLMRMGDGEPWKSGD*
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mRNA from alignment at P-littoralis_Contig698:62238..72085-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig698.17.2 ID=mRNA_P-littoralis_Contig698.17.2|Name=mRNA_P-littoralis_Contig698.17.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9848bp|location=Sequence derived from alignment at P-littoralis_Contig698:62238..72085- (Pylaiella littoralis U1_48)
ATGCCGAATCTACGTGCCCCGCAGGTATTGTCTTGTTTGGTGTGCTTTGT
GCTAGCTTGTTCCCGTGTTTATTTGTTTGTGGTGCCAACCTCTTCGGAGA
TTCGTTGCTCTGGTTTTGAAGTGGTTTTTCCCCAACATCAAGCAGCAGCG
TGTGTCTTTCGGACGTCACGTCTCCGAGCACGGCGTTGCCTTTGTGTAGA
AGAGAGGAAATCTCCTCTTGTCGTTCCTGCTGTACATCTGGGGGATAGGT
GTAATCGGGGTCAAAGCAGGACATCGATTGCCTCAAACCTCTGGTGGTGG
GTACTGAAGATCAGTGGCCCGATCTCCTACGGTTGCCTCTCCTCTCTCTC
CTCCGCATCTCCTGCCGCTCTTCCGTCGCCGCGTCCCGATTAGATCCATG
CCATTTACGTCCTCCGCCCTTCTGCAATACCACGCCATAGCTATGTTATA
CGTGGATTGCAGTTCGTACGATGCGTAGACTCTGTCATGATCGGGCTCGT
AGTGCTAGACGCAGCTGCGCACCGCCGGCTGGTGTTTCGTTTGTCTTTGG
ATCTCACCAAGGTCTCCGTTGGCGGCCATCATGCGGCATACCCACGGCGA
TGCCTTTAAGCCCGTTATCTGTTGGACATCTTCTTGGGCACGAGTTGGGG
ACACCGACTCTCTGAAGAATAAAGCCTGGCTTCGTGACAGCTTCAATGCC
GTTTGGGCACGCTTGTTGTGCCTTGTCCGGGGGTGCTGTGTCTGTGCAGT
CTTGGTGTCTAGCCTAGCCCTTGGGCAAAAGCCATACCTGCTACCAAGTA
CATGTCTCCCGCATATATTCGGCGGAATGTTTGTGAAGCTGAGCACCTAA
TATTGGAACGACTCGGCTACTACTGTACACAAAGCAAGGTGCATCCATTT
TTGGGGGCGAAATCGGGACACTTTCCTGTGTATCCAAGTCACCTTTGTTC
GCCGAGAAAAAAAAGAAGCAGGGAGCTGCTGCGTTGTAAACTCTTGGCTT
ATGATGCCCCCTGAAGAATTTTCAGTAGCCTTCGCAGGGTTTGAAAGAAG
AAAGAAATTAAGTCTAGTTGAAATTAGTGGGGGGTTCGGGGTTGGGGTTA
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTGCGTAACCCCACCCC
CTCTCTAATTCCTACTTAACTTAATTTTCCTGCGAAGGCGGTCCAGAATT
TTTTGTTGTACCCGAAGTACCGTATCTTTCTATTGGGTGCTCCATCAAAG
TGTCAAGACAACGCTCCAACGCTAGGTTTCGCATAAAAAACAGGATTTGG
AAAGGAACGGCGTCTGGCTAGAATAAATGAAAACTTGCACATACGGGCAG
GGATTTGCACCGTAGCTTTTGTTCGAACGGGCCTAAAAATCGACCAGGAG
ATACCTCTTTTCAGGAGCTTTTTGGGCCGTATCATAGGTCGGAATTTCAA
ACTCTGCGGAATTTACACTTACATTCCCAGAGGTTTGTCTAGCCCAAGAA
ATCGCCCGGTAAACCAGCTGAATTCGCGCCCCATCCGTTTGCGATCGGGG
GTGTACACGCGAAGAACGGCAGCATCGCGTGATCGTACCCAGCAGATCCG
GCATTTGGTGCAATATCGGGCTCCTGCATGCATCCTATCTAGATATGTTC
ACAAGAAAACCTCTAGAACCGTCTCTGGCTACCGTAATCATGCGAGTCAT
CGCACCCCCGTGTTAGCTTTTTTGCATTCCGTACTGCTCCACAACCAGGA
GAGTCCCACTGCCGAAAAGGGTGGTTTTGAAAAGATCTCGTCGAGAGCTT
TTGTATGACGGGTCGTTTGGTGTTCGCTCTCTCCTGGTTATGGAGCAATA
CGGAATGCAAAAAAGCTAACACGGGGGTGCGATGACTCGCATGATTACGG
TAGACCTGCTGCTGCTGTTATGGCATGACATGGGACTCACACACCACTTG
TGGGGATCTCCGGCTGAAGCGCGGTTCCCCGGGAGTTTTCCACCAATTTC
CATCCGGGAAGACGATACCCAAAATGTCATTTTTGAGCACCTCGATCTCG
CGCTTCAAAGTTTTACTGCGCATATAATCCATAGAGGAGATCGAGCCAAG
ATGAATGGGCTGAAAACATCCGGTGGGTTTCTGTCTCCCAAGGGAGAACA
GGCGAGGGAAAATAATATACCGAGTACAGCAGTCAGGGAGGGCACCGCCA
AGGATTACATACCAAAGAGTTTGGGATGTGGGAAACAAAATATTATACCG
TTGTGATTCAAAAACGCCATCGAGGAGCCCCGGGACACTGAGACGGCGCC
CCCTCCCCCCAGGGTGGCCTTAAGAGGCACAGAAGCAGAAAAAAAAACGG
ATATCGACACGGCCAATCGCGCGCGCGAGGTTGACCCGTGTGCAGCAATA
GCAGTGTACAAGTGTTGTGGGTACTACTCTTCCTTTCTACTGCTGTTTCC
CTGCGCAGCCACCCCGTGTAGCCTCGCTCTTCCTGCCGTAGACTGGCGGC
ATCCCGCTGTCTCGGTCTCCATACTCTCCTGACTTCCCACCAGGACGCAA
TTGTTTTATGTAGCAATGGCTAAATGAAACCAAACCAACCACATCGGTGT
GGGGGGGTAGGCGTACCACGCGCCTTCATCTCTCGGTAGGAGGCCTTTCT
TTGTTGCCCGGCGTTGATTCCCCTCGACGTGAAGAAACCACCTCGGCGAA
CGAAGCTCGAAGAGCTCCAACGTCCACACCACGGCACCGGATGGCGTGAA
TTGAAATCAAATCAAATCAAATCAAATCAAATGGTACTTCGTATGATGCG
CTCATGACATGACCCCTGAGGAGCGGAGCGAAGACTTGATCAGAAGCCAA
GAGGAATTGCCTCTCGGGGACGGTTTTTGTCGGATGACAGTGCAGTGGTA
GCGGATCATGGCGTTCTTCGTGACCCGGTCGGCGCGAAGGGTAACGCCGT
GAGGAGCACACGACCGGCTCATCGTGTCGGGCAAAACCTGTCCCCCAGTG
GCGGTTTCGCTTGACTTCTGGCCGCGTCTTCGACCTGCTCCCCAAGAGCC
AAGTCATGACCACACCATATACAAGGAATGACACCCAGTGCCTTGGCGTG
GAGGTTGGTTTCGGCGCCCACCCGGCGGTATCTTCGCTGAGGGGAATGAA
TGCCCGGCCCCATATGGAAGGCCTTCTGAGAAAGAAGTCACCATCCCCAC
CGACTGGCTTGGTTTGCTTTCATTGTCGCTGTAAGTGTTGTAGCTTCTGA
TTTGCTCAATAAAGCCGATTTACGTGACGTCTTCATACCGTACTCGATCG
ATGTCGGGCTGTAGGCAGGCGCTGCGAAAACATGAAATCGATAAAATATC
AGGAACGGGTTTGTGAATTTTCACAATAACCAAACAAAGAGGAAGCACAT
AATAATATATAAATACGGTACGAAGTAAAGAGTGCTCTGGATTGTTTTTA
AAGGACTATTTGTGTAAGAAACTGTTGGTGAAATTTCCTACCCCCCGCAC
TCCCACCTACACGCCCACCGTGGTCGATAAAACCATGATGCTTACCTTGG
AATGCTTGCCAGGTGGAGATCGTGGACCTGCGGGAAGACTATGTCGAGTT
CGTTTTGTCCAACACAGACACTTCGGTTGCGAACGCTTTGAGAAGAGTCA
TGATCGCAGAGGTGAGCGGCACGCTGATTGTGATTGATGACGCTTGTGTT
GATGGTGTTGGAGTTGGTGCTGGTATTTTCAAGACGGATGTAATTATGGA
AATGCTTTGTAGATTACCCATGCTTCACCTGGCTGCTGTTGTTGATCACA
ATAGCCTGCTGTGGCGATGGATATTGATTTTTTGTGGCATATATTGTAGA
GTGCGGATATTTCGTTGGTGGTGACTGTAGTAGGAGTACGAGTAGCGCCC
CATCTCGAGGGGGATAGTTGCTGGGTCAGTGGTCAAGTGGCTTACGCAAG
CAACAGCAGTAACCCCCCTCTAGACAATAAGTGCTGCTTATCTCTCTTCC
CCCTCCTTCTTTTGTCCTTGCCGTACTAAATTGCCATGGCTATGTTGGTG
TACCTCTATTGTATGCGCACTTGAAACCTTCTTTGCTGTTACCCACAGTG
ACCCAGCCACCCGTAGTTCCGTGCATAAATGTTTGTTTTTCCATTTCTCG
TGCCGTATTGTCTCCCACGTGATTGGTCCATATTTCCCCTCTTGATTGCC
CCGGTACAGCAGGGGTTCAACAGAAAGTTTCCTCTGCCCGCCCTCCCGCC
CCGGTGCTTTTGTTTCATTTACTACGTCAATCGAATCAAATCGAACCAAG
TCACACCCAAACTTTCTTTTCTTTTAGTCCTGAGTCTCCCCCCCCCTTTC
CCCCCTCTCCCAATGCCATTATTCTTATACCATTTTTCAAAGCAAAGCAA
ATCGAATCATCGGGGGGGGGGGGTGTCGTTGTTCGTTCTCTCGTTGATCA
GGTTCCAACCATGGCGATCGACCTTGTTACCATCCACGACAACTCGAGCG
TCCTCCAAGACGAGTTCCTTTCGCATCGGCTCGGACTCATCCCTCTAGCG
GCGGACCACGGCAAGCAGTACGAGTACAACTACGTGAGGACCCTGTGTTG
CCTGGGATGGTGCCAACGGTTGTTGTTGTTGCTGGTTGTGGTGGTGGTCG
TTGCGCCGGTGGTGGTGTTGTTGCTGTTTGTTCTGTTTGAGTTTACCGCA
CGTCCTGTGACCTTTTTGTTTAATCTTTTCACTCCGTATTTCATCGGCAT
CTGATAAGTTTTATTTACTCCGTATTTATTTATTTGTTTTCGTCGCAGGA
TTGCGACTGCGAAGACTACTGCCACAAGTGCTCCGCGGTGTTCACGCTGG
ACGTGTCCTGGGAGAAGAAGTCGTTGGGGAGGCCGGAGCACATGAGGGAC
CAACCGGTGCTTGTCACATCCGCGGACTTGGTCGGCACTGTGAGTACGGC
AGTATGATAGCAGCAGTGCGGAACCGTCTCGCGCGGAAAGTGTCACGAAC
ACTGACGCTCAAGTCCCCCGTCGGATGATATTGATACGGCGGTGCCCCCT
CACCCCGTGCGCGCGCGCCGTCGTTTGTTGTTGTTGTTGGTTGTTTCTTG
TGTGCAGGACCCGGAATTGCGGCCTGTTCACTTTGCTCCCTCGGATCAGA
CAAACAGCGACATTTCGCAGGACGCCGGCATCGTCATCGCGAAACTGGCC
AAAGGTGCTCCGTGCGTTTGCTTTCTGAGACAAAGCGGGTTTGTCAGAAT
ACTGAAAAAGGGCATGGAAAATGTCTGCTGGTATGCTTGATTCGCGAGGG
TTGAAAAAATCACACAACAGAGTGGGAGATTCGAGGGACTATATGCACAG
GAGGGGTCGGAGGAGGGCGACGTCAGAGTATCGATTTGGTATATGACGGG
GGGTGTCTATGGGGGTTCAATTTGCGGATGGGATTTCGATACGTGCAACT
ATGAGTGGGTTTTACAATTTCAAAACCACTCCCGGGACATGATGGCCAGG
ACGGTCGAGGAGAAGTCGTTCCCTCTCTCTCTCTTCTCTCTTTCTCTCTC
TTTGTGTGCTTTTTCATCGACGAACTATATCCTTGAACCATGACGGCCGG
ATGAACTACATACAGTATATCGGTGAACACGCGGCAATGGCGTGGACGAC
CCACCTACCTTGTGTTTTGCTTACCCTCGCATGAGATGCGGTTCCATAAT
CACTGCTGCATCGCGATTACCGGTATAATGAGTTCGCCCCCAGTGCGTGA
ATTTCCTCGCTTCCCCCCTCTCCGTCGAGAACGAAATCCGCCCAGAAGTA
CGAAAAGCTTGAGTATTCCCTGGCGAGTCACCTGCGTCTTGAACGAACAT
TACACCCCCCCTCTGGTTGAGTCTCGCCGGGGGTAGCGCTGCAATTTCTT
TGCTTGAACAAACAGAACATATCCCCTCTCTTTGTTGAGTCTGCCTGGGG
GTAGCGCTGCAATCTCTGCAAACATGCACGCATCTCTGGCGGAAGGCAGG
AAATAAAGAATGCAGGAACTCACCTTCCCGATCGGCGAGTATCGTGCCGC
CGTGAGTTTTTATTAGTGTTTCCCTCGCTTTGCTGCATTGCACGGCGTGC
GTCGGCAAACGACACACGACACGCAGGCCAGCGCATGCAGCTCACTGCGG
TGGCGAAGAAGGGAATCGCCAAGGAGCACGCGAAGTGGTCCCCCGTCGCA
GTGGCGACCTACAAGTTTGAGCCCATCATCGAGATCAACGAGGAGAAGGA
GGCGCTGCTGACGCCGGAGCAAAAGGCGGAGTTCGTAGAGATATGTCCAG
CGAAGGTAAGGCTTACAACTACTGTACGACGCTTTTTTTGGTCCGTTGTC
CGTCTGCTGCTGTTGGTTGTGTGCGTTGGTTGTATGATGAGTTGCGGTGT
AAATTTGGTTTTCTCAAGCTTTGTCGGAGGCGATTTAAATGGGTTGTACA
GACGGCACAACAACCGAGATGTGGACACATCCTCCTATTGAGCGTCGGCC
TCTCTACCGATGCACATCAAAAGTAAGATGTTTTGCAGCCGCCCTTTGTC
GAGAGCGGAAGTCCCACCTGCTCAAATGCCATTGCGTCTGAGCAGGCGCT
CTTGATGTAAGTTCGGCTCTGAAGTCAGCGCGAGCGCGGTGTGTGCGTGT
GTGTGCGCAGCTACATTGTAGTTTGTTCGTGCTTCCAAGCTTGTCCTTTT
TTGGTCGTTGTTTTGTTTGTTTTTCAACCGGTGTTGGTTCATCCGTTTGT
TCGTTCGTTTGTGTTTTCTCGAATTTTGTTTTTCTTCATTATTTGTTGTG
TCTTCTTTCCTCGGGCCGGGCGGACAGGTGTACGGGCGCGACGAAAAGAC
CGGCACCATCTTCGTCGAACACCGAGATATGTGCATGGTGAGTCATCAAC
CAGAGTAGCCTAGGCTAGACCAGGCTAAGCTAGACTAGGCTAAACTCGAC
TCGACTCGGCAGGAGGGTGTGTTTGATTTCATGACCGCTCTTGTTGGTGC
TTCCGACAGTTTTTTTTTTTATGATCTCGGCGCCGTCGTCCCTCGCGTTT
GCACTTTTTTGTTGTTGTCCACGTTTCTCTGCAATACTGCTTGCTCGACA
CCTTAGTGACATAGCTGTTGTACACGGCTGGCTAGCTGGACGTGACGAAG
AACGGCAGACTTGGAAAAACCACAAATAAAGTGTGCATACGACCGGTTGT
TGTGCTTGTTTGTCGTTTTGACTAGTTGTCTAGTTTTTCGATGTGTGTAA
AGTACGGTTACTGCTGCGCCAACTCTGTGTGATACGGTGTATCACACACC
GTTTTGTGATCCTCACGTCCTGTTTCATGCGGGCAGCTAGCGGTTTTATC
ATCGTGTGTTTTCTGGGACGCGTCCGAGCACCCCTTTCTTCTCCCCTCCC
TCCCTCCCCCCCTCCCTCCCCGCCCTTCCCCCTCTCACCCTCTGCCTCTT
CCTTTTCCTCACTCTCATGATGTTTCCTTCGTGCTTGTGTGTGTTTGTTT
TTCGTTCCCGGTATCCAAAGTACTGCGACGACTGCGTTTACCTGGCGAAG
ACGTACAAAGCGAGGCCGGAAGACGACCCGGTGGTCAAGATCAGACCAAG
GGACGACCGGTTCATCTTCTCAGGTGTGAAGTACGAGAAACGGGCATGAC
ATGACGTGACACGTTCGTTTCCCCCTTGATTGTTTTGCCCGTCGAGGCAG
TCACCCGTACCTTATTTCATCCTCCTCCGTCGTCTTATCTCTTTTGCGGA
CTTGTGGAGGTATCATGCACTACTGCTGCTGCACTGCACTTGTGTACCCG
TTTTCGGTCACGGTCGTCTCGCCTCTTCTGCACGTGTGAGAGGCGTCACT
CATTGTTCTCCTTTTTTTTACCCTCTGCGGCCCCCCCACTTGCCCATTCA
TTCGTCTGCCGGCCTGTGCGTGGTTTTCATTCTGCGTCACGCCTGGCTGG
CTATCTGCCTCCCTCCTGGCGGGCCCGTTTTTCTTCGAGCAGTGGAGACT
AATGGTTCGATCACTGCGGAGGAGGTGGTCGTGACGGCACTCAAGGCGAG
TTTGTTCCCTCTTCCGGGTACACACTGGAGCCTGTCTCTGCCCTCCCAAT
CATGACATAGGCGAAAGATAAATGAAATGTTTTGCTACTGGTGTCATGTA
CCAGTACCGTATTCTACACAACATACCACACCCCGTGTTAAGCTTTTTGC
ATTCCGTATAGCTCCACAACCAGGAGGGTGCCACTGCCGAAAAGGGTGGT
TTTGGAAAGATCTCGTCGAGAGCTTTCGTACGACGGGCTGTTTGGTGTTC
GCACCCTCCTGGTTGTGGAGCAATACGGAATGCAAAAAACCTAACACGGG
GTGTGGTATCTTGTGTAGAATACGGTACTTTTTTTGGGCCACACGGACTT
GTCGTTCACGCACGTGTTGGTTTGTGGAAACAAACAAACCTACAAACACC
TGACAAGCAAAACAAGCGTATGCTTTCAATGATTCATAATTCGATGCGCG
CTCCTTGCAGGTAATATCTGACAAACTGCTGAACCTGAGGAACGATCTGA
TGCGAATGGGTGACGGGGAGCCCTGGAAGAGTGGGGACTGAAGATCAAGA
TCAAGATCAAGATCAAGATCAAGATCAAGATCAAGACGAAGATTAAAAAT
AAAATGAACACGGAGCTGAAAATGAAGATGGAAGAACAGCGCCTTCGGCA
GCGGAGTGAGTCTTAAGACCTGCGGCCGAGTGCGTTCGAAGATCAGGTCT
TTTGATTTTGGCATGTACTTCGAAATACGTTTTTCGATATTTCGAGTGTC
GTTCACCACATCCGCTCGAATCCAGCAACGCAACTGAGAAATGGCCAGGC
GTGGGCGCCGAGGAATGGGGGCGGGGGCACAGCAAAAGAACTTAGTACCG
TAGTACGATGCCATCTACGTAGTTGGAGGTAAATTGCAACCGAGTTTATA
ATTTGATGTGCCAAGATGTAGTGTGGTGTGGTGTGATATGGCATGGTATG
GTACATGGCCGAGCCGGGTGTACCTGGATTTATTACCTCGGTAGAGTACA
GCAGTACGTCGTCTTCTGTCATGACGACAAATAGACTGTAATTGCCTCCC
TTCGTTTTGTTTTACCGCCGGCCTAGGAGTGTGAACCCATCTTGCGGCTA
CCCTTTTCCTGTGTTGGTGGCTGACTTTACATGTCTGATCCGGGACGATA
CACCAATACAGCAGTGCAACGTTTCCCCTCCCCGAAGGCCCCTCGGTTTC
CATTTTCTTAGCAGTGCTTTCCCTCTCTTACTTGCGACTTCTTGCTCTGC
TAGCCTTCTCTGTACTTGCTTTGCTCTTGCTCACTGGCCTTGATTAAACT
TTTGCTGCATCCAACGGTCGGTGCACCTTAAGAAATGTTTAGCGATTACC
GGGATCATTCAAACCCGGGACCTCTCATTCAATGGGGGAGGGTGCGAAGC
TTGAGCCTCACGGTGAAACGGCCTGGGTCAGAGCCTTCTAAAGGCTTGTC
GGGGAAGCGTGCTGTCCTCCTAGGTCCGGAGAGAAATGGGTTAGAATCCC
GGTTCCACTCGCCGGGGGTGCGGCAGACTGTTTACACTACTGCTTTATGT
TTGTGAGCCCTTCCTTGCACCGAATGGATTTCCAAAGCTCATCTATTCCC
TCACAATAATAAAAGAGTTGCCGGTGCCGAACGGAGTGGGTCGTCCTAAG
ATCTCAATAATACTGTAATGCCATGGTTTTTACGTTTTTACAAAAGCGCC
TCGTTTGCTGCTGACACCCTGGATATTTGCAGATTGCAGAATCGAGCGTT
GCAAATCGGCCCACGGAGGGTGGAAGGTTTAAACAGAGTAAGGAGGCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig698:62238..72085-

>mRNA_P-littoralis_Contig698.17.2 ID=mRNA_P-littoralis_Contig698.17.2|Name=mRNA_P-littoralis_Contig698.17.2|organism=Pylaiella littoralis U1_48|type=CDS|length=969bp|location=Sequence derived from alignment at P-littoralis_Contig698:62238..72085- (Pylaiella littoralis U1_48)
ATGCCGAATCTACGTGCCCCGCAGGTGGAGATCGTGGACCTGCGGGAAGA
CTATGTCGAGTTCGTTTTGTCCAACACAGACACTTCGGTTGCGAACGCTT
TGAGAAGAGTCATGATCGCAGAGGTTCCAACCATGGCGATCGACCTTGTT
ACCATCCACGACAACTCGAGCGTCCTCCAAGACGAGTTCCTTTCGCATCG
GCTCGGACTCATCCCTCTAGCGGCGGACCACGGCAAGCAGTACGAGTACA
ACTACGATTGCGACTGCGAAGACTACTGCCACAAGTGCTCCGCGGTGTTC
ACGCTGGACGTGTCCTGGGAGAAGAAGTCGTTGGGGAGGCCGGAGCACAT
GAGGGACCAACCGGTGCTTGTCACATCCGCGGACTTGGTCGGCACTGACC
CGGAATTGCGGCCTGTTCACTTTGCTCCCTCGGATCAGACAAACAGCGAC
ATTTCGCAGGACGCCGGCATCGTCATCGCGAAACTGGCCAAAGGCCAGCG
CATGCAGCTCACTGCGGTGGCGAAGAAGGGAATCGCCAAGGAGCACGCGA
AGTGGTCCCCCGTCGCAGTGGCGACCTACAAGTTTGAGCCCATCATCGAG
ATCAACGAGGAGAAGGAGGCGCTGCTGACGCCGGAGCAAAAGGCGGAGTT
CGTAGAGATATGTCCAGCGAAGGTGTACGGGCGCGACGAAAAGACCGGCA
CCATCTTCGTCGAACACCGAGATATGTGCATGTACTGCGACGACTGCGTT
TACCTGGCGAAGACGTACAAAGCGAGGCCGGAAGACGACCCGGTGGTCAA
GATCAGACCAAGGGACGACCGGTTCATCTTCTCAGTGGAGACTAATGGTT
CGATCACTGCGGAGGAGGTGGTCGTGACGGCACTCAAGGTAATATCTGAC
AAACTGCTGAACCTGAGGAACGATCTGATGCGAATGGGTGACGGGGAGCC
CTGGAAGAGTGGGGACTGA
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