prot_P-littoralis_Contig697.16.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig697.16.1
Unique Nameprot_P-littoralis_Contig697.16.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length367
Homology
BLAST of mRNA_P-littoralis_Contig697.16.1 vs. uniprot
Match: A0A6H5JSP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSP6_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 1.380e-101
Identity = 197/334 (58.98%), Postives = 222/334 (66.47%), Query Frame = 0
Query:   49 QHVCFRPVTCTTYSSTHCNRSSRCSSATFGKVLLLRRAVFDQEFWHMFSQPL-RSLSCGR-----------------AAMTRAEGLYSR-SAAIVGYTRAFGGQSVVPWELALFLVEEMKAEMVQPGAVVYTAALAECRWAGEQRHVDYLLQEMEAEGLSIVPGIPGATDNELPPSQAPPLFGKLPETPPGMSKSNPQHAPLAAAPTPSTAVAT----MQAAARTADAALVTVETMWAREEHDPSPATCRAALDACAAGGQWERALSMVRDAAMAITADGDAGNSGGGEEEEDLEEGSVSRRVETLALAGKWNKALLLVQGEEGLSEHGGAGGE 359
            +H C  P    TY   H N SS  SSA   KVL L R V  Q+  +  S P  R + C                   A MTR+  +  R S A VG  R FGGQSVVPWELALFLV+EMK EMVQPGAVVYTAALAECRWAGEQRHVDY+L+EM+AEGL+IVPGIPGAT+++ PPSQ+PPLFGKLPE PP  + + PQH P    P    A A     MQ AARTA+AAL TVETMWAR +HDPSPATCRAALDACAAGGQWERALS+VRDAA A+T     G S   +  E  EEG V  RVE LAL G+W+ ALLLVQG+   SE GG G E
Sbjct:   42 KHQCGVPSRSATY---HVNPSSA-SSAAISKVLPLGRTVPKQQRHYCCSLPRNRPVVCDHSPGQSPAALAHSFYDAAAGMTRSGRIGQRCSTASVGSIRKFGGQSVVPWELALFLVDEMKGEMVQPGAVVYTAALAECRWAGEQRHVDYILKEMKAEGLNIVPGIPGATNDDPPPSQSPPLFGKLPEPPP--NSATPQHQPGTGGPDQHAAAAAVVEKMQEAARTAEAALATVETMWARAQHDPSPATCRAALDACAAGGQWERALSLVRDAAAAVTVSAGPGASVPSDRTEG-EEGGVPGRVEALALEGRWDDALLLVQGKACSSEGGGDGVE 368          
BLAST of mRNA_P-littoralis_Contig697.16.1 vs. uniprot
Match: D7FTJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ1_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 2.610e-65
Identity = 139/242 (57.44%), Postives = 157/242 (64.88%), Query Frame = 0
Query:  108 AAMTRAEGLYSR-SAAIVGYTRAFGGQSVVPWELALFLVEEMKAEMVQPGAVVYTAALAECRWAGEQRHVDYLLQEMEAEGLSIVPGIPGATDNELPPSQAPPLFGKLPETPPGMSKSNPQHAPLAAAPTPSTA-VATMQAAARTADAALVTVETMWAREEHDPSPATCRAALDACAAGGQWERALSMVRDAA--MAITADGDAGNSGGGEEEEDLEEGSVSRRVETLALAGKWNKALLLVQ 345
            A MTR+  +  R S A V   R+FGGQSVVPWELALFLVEEMK EMVQPGAVVYTAALAECRWAGEQRHVDY+L+EM+AEGL+IVPGIPGATD                                          V  MQ AAR A+AAL TVETMWAR +HDPSPATCRAALDACAAGGQWERALS+VRDAA  +A++A+ DA     G      EE  VS RVE LAL G   +   +++
Sbjct:   22 AGMTRSGRIGRRCSIASVDSIRSFGGQSVVPWELALFLVEEMKGEMVQPGAVVYTAALAECRWAGEQRHVDYILEEMKAEGLNIVPGIPGATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKMQEAARAAEAALATVETMWARAQHDPSPATCRAALDACAAGGQWERALSLVRDAAAAVAVSAEPDASARRDGTA---AEEDGVSGRVEVLALEGSRGRVRGMLR 260          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig697.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSP6_9PHAE1.380e-10158.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTJ1_ECTSI2.610e-6557.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 120..346
e-value: 4.5E-9
score: 38.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig697contigP-littoralis_Contig697:87427..89443 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig697.16.1mRNA_P-littoralis_Contig697.16.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig697 87358..89953 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig697.16.1 ID=prot_P-littoralis_Contig697.16.1|Name=mRNA_P-littoralis_Contig697.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=367bp
MSSTVRAARQISCRVSPGSFPRVAATRRSRLVKLAAPASSSASNRGRGQH
VCFRPVTCTTYSSTHCNRSSRCSSATFGKVLLLRRAVFDQEFWHMFSQPL
RSLSCGRAAMTRAEGLYSRSAAIVGYTRAFGGQSVVPWELALFLVEEMKA
EMVQPGAVVYTAALAECRWAGEQRHVDYLLQEMEAEGLSIVPGIPGATDN
ELPPSQAPPLFGKLPETPPGMSKSNPQHAPLAAAPTPSTAVATMQAAART
ADAALVTVETMWAREEHDPSPATCRAALDACAAGGQWERALSMVRDAAMA
ITADGDAGNSGGGEEEEDLEEGSVSRRVETLALAGKWNKALLLVQGEEGL
SEHGGAGGEGWKSSEW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf