mRNA_P-littoralis_Contig697.15.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig697.15.1
Unique NamemRNA_P-littoralis_Contig697.15.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig697.15.1 vs. uniprot
Match: D7FTJ0_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ0_ECTSI)

HSP 1 Score: 498 bits (1281), Expect = 3.540e-174
Identity = 226/312 (72.44%), Postives = 261/312 (83.65%), Query Frame = 1
Query:    1 WRSMLAQWCTSAVAGCFLLFLALAQELEEPYTDADKDRPKSFWDTKVQVDPCCDVIPGEPLEVTIWFRTDGNFSETDTLFVDLPRLTTGTVENMFNDGTDIGLGELEVSPSTLWLGAWEQGVFDEASPFETSRLRMVLRPDRTIDPESEEDVFMRISKRNRISAFCGWAEDWVGFRIYTNSSGFDDLAIETSPRLGDGCRGDCYERGVCDYCHEACLCHEGQGNRTVDVVSSGGWTRLDCAHYVCPSGRSWAARPETLEGGGRGSLESHALEECSGNGRRENVDAHCFWQKCDRTSAACICADGFEGDACQR 936
            W ++L QW  +A     +L LAL QEL+EPYTDAD+DR KSFWDT+V+VDPCCDVI GEPLE+T+WFRTDGNF+E+  L+VDLPRLTTGT+EN+FND TDIGLGEL+VSPSTLW GAWEQGV+DE SP+E SRL MVL+P RT+DP+S+ED+F+RISKRNRISAFCGWAED V FR+YTNSS F +  IETSPRLGDGCR DC+ERGVCDYCHEAC CHEGQG++T D+V SGGWTR+DCA YVCPSG+SWAARP TLEG GR SLE+H LEECSGNG             CDRT A+C+CA GFEGDACQR
Sbjct:    3 WGAVLTQWYVTAATAYCILLLALGQELDEPYTDADEDRLKSFWDTRVEVDPCCDVILGEPLEITVWFRTDGNFTESAALYVDLPRLTTGTLENLFNDSTDIGLGELDVSPSTLWRGAWEQGVYDEDSPYEGSRLLMVLKPGRTLDPDSDEDMFVRISKRNRISAFCGWAEDSVDFRLYTNSSDFGEAIIETSPRLGDGCRADCFERGVCDYCHEACHCHEGQGDKTFDIVDSGGWTRIDCADYVCPSGKSWAARPTTLEGRGRASLENHGLEECSGNG------------SCDRTDASCVCAPGFEGDACQR 302          
BLAST of mRNA_P-littoralis_Contig697.15.1 vs. uniprot
Match: A0A7S2WUH0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUH0_9STRA)

HSP 1 Score: 246 bits (627), Expect = 2.270e-73
Identity = 150/382 (39.27%), Postives = 195/382 (51.05%), Query Frame = 1
Query:  166 IPGEPLEVTIWFRTDGNFSETDTLFVDLPRLTTGTVENMFNDGTDIGLGELEVSPSTLWLGAWEQGVFDE-ASPFETSRLRMVLRPDRTIDPESEEDVFMRISKRNRISAFCGWAEDWVGFRIYTNSSG-FDDLA------IETSPRLGDGCRG--DCYERGVCDYCHEACLCHEGQGNRTVDVVSSGGWTRL-DCAHYVCPSGRSWAARPETLEGGGRGSLESHALEECSGNGRRENVDAHCFWQKCDRTSAACICADGFEGDACQRNSCPSDCSGHGVCLSMHDLGRTNEALPLMDVSNIYGGGVGSDEEVAWDFESMYACVCDSSWEVGLGAGQRQQAEYFGADCSQRRCPTGDDPLTGG-DDTDCEGVTAEGGFGVGQ 1275
            + G  L + + F      + TD ++V LPR T G        G    L  L+ S +T +L  W +G FD  A PF  + L + +RP  ++   + + V + I +   I A CG+  DW   RI TN+SG   D        +E +  +G GC    DC   GVCD+C + C C EG G       +        DC    CP   +  + P T       S+    L EC GNG            KCDR S  C+CA G++G+ACQR  CP+DCSGHG CL+M +L  T EALPL   +    G +      AWDF+  +ACVCDSSWEVGLG+GQ Q  EYFG DCS RRCP GDDP T G D+TDC   +A+G  G GQ
Sbjct:   36 LVGAVLSLKLRFIPKITLNGTDEIYVSLPRFTRGNARGQ--PGPSGAL--LQFSRTTRFLATWNEGSFDHSAMPFAQTNLTLQVRPGESMP--AGDPVEVEIYEEEGIRAHCGFPADWEEIRIGTNASGTLGDNGQVMLGRVEQTGFVGSGCSWLLDCSGHGVCDHCKQRCECFEGYGGSLAGGAAPPPMDAAPDCTSRTCPVAPAVRSMPSTA------SIAHAQLLECGGNG------------KCDRASGECVCALGWQGEACQRRRCPNDCSGHGRCLAMEELAATPEALPLSGSNGSMYGSLDRRATKAWDFDKAFACVCDSSWEVGLGSGQVQGPEYFGPDCSLRRCPGGDDPRTPGVDETDCSNKSADGFRGRGQ 393          
BLAST of mRNA_P-littoralis_Contig697.15.1 vs. uniprot
Match: A0A7S3NPQ7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPQ7_9STRA)

HSP 1 Score: 233 bits (594), Expect = 1.830e-68
Identity = 139/377 (36.87%), Postives = 202/377 (53.58%), Query Frame = 1
Query:  178 PLEVTIWFRTDGNFSETDTLFVDLPRLTTGTVENMFNDGTDIGLGELEVSPSTLWLGAWEQGVFD-EASPFETSRLRMVLRPDRTIDPESEEDVFMRISKRNRISAFCGW----AEDWVGFRIYTNSSGFDD--LAIETSPRLGDGCRG--DCYERGVCDYCHEACLCHEGQGNRTVDVVSSGGWTRLDCAHYVCPSGRSWAARPETLEGGGRGSLESHALEECSGNGRRENVDAHCFWQKCDRTSAACICADGFEGDACQRNSCPSDCSGHGVCLSMHDLGRTNEALPLMDVSNIYGGGVGSDEEVAWDFESMYACVCDSSWEVGLGAGQRQQAEYFGADCSQRRCPTGDDPLTG-GDDTDCEGVTAEGGFGVGQA 1278
            P+++ I        + TD +++ LPR T+G  +   N G++I  G+L++ PS  + G W +G F+ E  P+  S L++ ++  R I+   + DV++  S  N I A+CG          GF I TN++G ++  + +E S  +G+GC    DC  RG C+YC E C C+E  G+   + +  G     DC    CP G SW+  P +       S E+     CS  G             C+  +  C C  GF+G AC+R  C +DCSGHG CL+M +L   + ALPL  ++ +        +  AWD + +  C+CDSSW VGL  GQRQQ E+FGADCS RRCP+ DDP T   D+TDC  VTA GG GVG++
Sbjct:   51 PVQIHIKMIPRMTLNATDLVWIQLPRFTSG--DGSKNPGSNIEKGQLKIGPSVYFEGEWIEGDFNSETRPYYNSSLKLYVKGSRWIESGVQIDVYVYAS--NGIKAYCGLDMASRSPDQGFIIRTNATGGNNNPVPLEDSDIVGNGCAAQLDCLSRGSCNYCTERCECYENLGDG--NPLHRGAVVSTDCTLTNCPVGLSWSGLPWS-------STEARVEATCSDAGL------------CEEQTGTCQCFSGFDGIACERMDCFNDCSGHGQCLTMAELAFMDSALPLSAITTLEARYGSHGKASAWDADIVRGCLCDSSWSVGLSLGQRQQPEFFGADCSLRRCPSADDPTTVVTDETDCSNVTAPGGRGVGKS 402          
BLAST of mRNA_P-littoralis_Contig697.15.1 vs. uniprot
Match: A0A7S4T8L0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T8L0_9STRA)

HSP 1 Score: 226 bits (577), Expect = 5.880e-67
Identity = 131/336 (38.99%), Postives = 187/336 (55.65%), Query Frame = 1
Query:  307 LGELEVSPSTLWLGAWEQGVFDEASP--FETSRLRMVLRPDRTIDPESEEDVF-MRISKRNRISAFCGWAEDWVGFRIYTNSSGF-DDLAIETSPRLGDGCR--GDCYERGVCDYCHEACLCHEGQGNRTVDVVSSGGWTRL-----DCAHYVCPSGRSWAARPETLEGGGRGSLESHALEECSGNGRRENVDAHCFWQKCDRTSAACICADGFEGDACQRNSCPSDCSGHGVCLSMHDLGRTNEALPLMDVSNI--YGGGVGSDEEVAWDFESMYACVCDSSWEVGLGAGQRQQAEYFGADCSQRRCPTGDDPLTGGDDTDCEGVTAEGGFGVGQ 1275
            +G+L V PS  W G W +G +  + P  F  S L + L    +++P +  ++  + + + N I AFCG   D   F I T++SG  +   IE S R+G GC     C   G CD+C+  C C+EG G+ +VDV  SG   ++     DC++  CP G S A  P +         ++H   ECS NG             C+R S  C+C + +EG ACQR  CP+ CSGHG+C SM +    + A+PL    +   YG      + +AWD ++M +CVCDSSWEVGLG+G+ Q +E+F  DCS+RRCP+GD+P T  ++ DC GVTA GG GVG+
Sbjct:    1 MGDLVVYPSIYWQGQWAEGTYCGSCPIPFHDSLLTLQLL---SLEPIAASELHNVVVGQSNSIQAFCGNGLDDTSFMIGTDASGLIETQTIEQSGRIGVGCDDLSKCSGHGSCDHCYNICNCYEGYGH-SVDV--SGTVVKIIDIQPDCSNKTCPLGHSAAVIPTSTN-------DAHGASECSNNGL------------CNRLSGECVCFELWEGSACQRRKCPNFCSGHGICASMMEQSFLSNAIPLSSSPDSLEYGSTDEMRDTIAWDHDTMQSCVCDSSWEVGLGSGEVQVSEWFLPDCSRRRCPSGDNPETAANELDCSGVTAPGGRGVGE 311          
BLAST of mRNA_P-littoralis_Contig697.15.1 vs. uniprot
Match: A0A7S2G565_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G565_9STRA)

HSP 1 Score: 229 bits (583), Expect = 2.200e-66
Identity = 143/379 (37.73%), Postives = 195/379 (51.45%), Query Frame = 1
Query:  178 PLEVTIWFRTDGNFSETDTLFVDLPRLTTGTVENMFNDGTDIGLGELEVSPSTLWLGAWEQGVFDEAS-PFETSRLRMVLRPDRTIDPESEEDVFMRISKRNRISAFCGWAEDWVGFRIYTNSSGFDD----LAIETSPRLGDGCRGD--CYERGVCDYCHEACLCHEGQGNRTVDVVSSGGWT-RLDCAHYVCPSGRSWAARPETLEGGGRGSLESHALEECSGNGRRENVDAHCFWQKCDRTSAACICADGFEGDACQRNSCPSDCSGHGVCLSMHDLGRTNEALPLMDV----SNIYGGGVGSD-EEVAWDFESMYACVCDSSWEVGLGAGQRQQAEYFGADCSQRRCPTGDDPLTGG-DDTDCEGVTAEGGFGVG 1272
            P+E+ I F      S +D + V LPR T+G  +     G +I  G    S +T     W++G +D +S PF  S + M ++    +   +       I K + I  +CG  E+W    ++TN+SG       +++  S ++GD C     C E G CD+C + C C EG G    D V+ GG+   ++CA   CP G ++A  P        G   +H   ECS NG             CDR    C C DG+EGDACQR  CP+DCSGHG CL++ +L    EALPL       +N+Y  G  S+    +WD  +  ACVCDSSW VGL AG++Q +E+FG DCS R CP GDDP T   D+TDC G  A GG G G
Sbjct:   91 PVEIQIQFVPAFTVSGSDLVKVSLPRFTSGDCKQ--TKGANIDYGSFYHSLTTFVDMRWDEGDWDYSSMPFANSSITMRVKEGMQLMAGTTYTFV--IMKASGIKIYCGLEENWEKLMLWTNASGSTSRNAPVSVAISEQIGDACENLKLCSEHGTCDHCKQVCECDEGFG-AVNDSVTKGGYPIAINCAMRTCPLGPAYADVPY-------GMYAAHQDTECSNNGL------------CDRAEGFCECFDGWEGDACQRRPCPNDCSGHGRCLTLEELANEKEALPLTHQDPAGANLYRYGTVSEMRNKSWDHATFSACVCDSSWGVGLDAGEKQHSEWFGPDCSLRHCPGGDDPGTETVDETDCGGKVAAGGRGTG 445          
BLAST of mRNA_P-littoralis_Contig697.15.1 vs. uniprot
Match: A0A7S1UJF5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJF5_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.290e-66
Identity = 127/344 (36.92%), Postives = 181/344 (52.62%), Query Frame = 1
Query:  247 LPRLTTGTVENMFNDGTD-IGLGELEVSPSTLWLGAWEQGVFDEASPFETSRLRMVLRPDRTIDPESEEDVFMRISKRNRISAFCGWAEDWVGFRIYTNSSGFDDLAIET---SPRLGDGC--RGDCYERGVCDYCHEACLCHEGQGNRTVDVVSSGGWTRLDCAHYVCPSGRSWAARPETLEGGGRGSLESHALEECSGNGRRENVDAHCFWQKCDRTSAACICADGFEGDACQRNSCPSDCSGHGVCLSMHDLGRTNEALPLMDVSNIYGGGVGSDEEVAWDFESMYACVCDSSWEVGLGAGQRQQAEYFGADCSQRRCPTGDDPLTGGDDTDCEGVTAEGG 1260
            LPR+T G       DGT       ++++ +T +   W +G +  A P+  ++L +V+  DR +   ++  +  +I   N     CG  E+  G +I         L  +       +G  C  +G C+  G CD C + C+C +G G+ T DV     +   DC+  VCP GR+W   P        G+  +HA  ECS  G             CDRT+  C C  GF G+ACQ+  CP+DCSGHG+C++MH+LG  + ALPL+  S +YG    ++   AWD     ACVCDSSW VGL +G+ Q+ E+FGADCS +RCPTGDDP+T   +TDC GV   GG
Sbjct:  105 LPRMTCGA-----GDGTPGTPPSTIQMTHTTYFTPTWTEGTYSYADPYPDTKLELVV--DRAMAANTQLSI--KIDADNGFMFHCGINEN-EGIKISVTDDALGALVTDELMDHTMVGPACTNKGTCFGHGTCDACRDKCVCDDGYGS-TSDVYEI--YVFPDCSERVCPKGRAWGDVPT-------GATAAHADAECSNRG------------VCDRTTGICACVAGFGGEACQKKLCPNDCSGHGLCMNMHELGGISRALPLVSSSQVYGSSA-NEATTAWDSLLNMACVCDSSWSVGLASGETQEPEWFGADCSLKRCPTGDDPMTSAVETDCSGVAPVGG 415          
BLAST of mRNA_P-littoralis_Contig697.15.1 vs. uniprot
Match: A0A7S2AMA5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMA5_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.000e-66
Identity = 119/279 (42.65%), Postives = 158/279 (56.63%), Query Frame = 1
Query:  466 ISKRNRISAFCGWAEDWVGFRIYTNSSGF------DDLAIETSPRLGDGCRG--DCYERGVCDYCHEACLCHEGQGNRTVDVVSSGGWTRLDCAHYVCPSGRSWAARPETLEGGGRGSLESHALEECSGNGRRENVDAHCFWQKCDRTSAACICADGFEGDACQRNSCPSDCSGHGVCLSMHDLGRTNEALPLMDVSNIYGGGVGSDEEVAWDFESMYACVCDSSWEVGLGAGQRQQAEYFGADCSQRRCPTGDDPLTGGDDTDCEGVTAEGGFGVGQA 1278
            I ++N I  +CG  E+    +I   +S        + ++I++S R G GC    DC+ RGVCD+C + C+C+EG G  T D +++GG   +DC+  VCP  +++   P + +        +H L ECS NG             C+RTS +C C  GFEGDACQR SCP+DCSGHG CLSM +L     A PL      YG       + +WD ES+ ACVCDS W VGLG GQ Q  E+FG DCS + C +GDDP T  D+T C   TA GG GVG+A
Sbjct:   17 IYRQNGIKLYCGIGENDPDLKIRWGNSSLATGWFGEWMSIQSSTRAGSGCTALSDCHGRGVCDFCKQTCVCYEGYGKDT-DTITAGGTISVDCSERVCPYAKAFGDVPYSTD-------SAHQLAECSNNGI------------CERTSGSCQCFPGFEGDACQRRSCPNDCSGHGQCLSMAELVNAAAAHPLTAADTTYGFSAPVSAQ-SWDAESLQACVCDSRWTVGLGPGQTQTGEWFGPDCSLQHCSSGDDPETKVDETACFNKTAPGGRGVGEA 274          
BLAST of mRNA_P-littoralis_Contig697.15.1 vs. uniprot
Match: D7FTJ2_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ2_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 8.540e-62
Identity = 97/114 (85.09%), Postives = 105/114 (92.11%), Query Frame = 1
Query:  937 NSCPSDCSGHGVCLSMHDLGRTNEALPLMDVSNIYGGGVGSDEEVAWDFESMYACVCDSSWEVGLGAGQRQQAEYFGADCSQRRCPTGDDPLTGGDDTDCEGVTAEGGFGVGQA 1278
            +SCPSDCSGHGVCLSM +LG+T EALPLM+ S+IYG  VGSDE VAWDFESMYACVCDS+WEVGLG GQRQQAEYFGADCSQRRCPTGDDPLT  DDTDCEG+TAEGGFG+GQA
Sbjct:   32 DSCPSDCSGHGVCLSMFELGQTAEALPLMNGSHIYGD-VGSDETVAWDFESMYACVCDSAWEVGLGPGQRQQAEYFGADCSQRRCPTGDDPLTAEDDTDCEGITAEGGFGLGQA 144          
BLAST of mRNA_P-littoralis_Contig697.15.1 vs. uniprot
Match: D8LCI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI8_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 1.300e-59
Identity = 148/400 (37.00%), Postives = 198/400 (49.50%), Query Frame = 1
Query:  166 IPGEPLEVTIWFRTDGNFSETDTLFVDLPRLTTGTVENMFNDGTDIGLGEL----EVSPSTLWLGAWEQGVFDEASP-FETSRLRMVLRPDRTIDPESEEDVFMRISKRNRISAFCGWAEDWVGFRIYTNSSG---FDDLAIET-SPRLGDGCR--GDCYERGVCDYCHEACLCHEGQGNRTVDVVSSGGWTRLDCAHYVCPSGRSWAARPETLEGGGRGSLE-SHALEECSGNGRRENVDAHCFWQKCDRTSAACICADGFEGDACQRNSCPSDCSGHGVCLSMHDLGRTNEALPLMDVSN----------------IYGGGVGSDEEVA-WDFESMYACVCDSSWEVGLGAGQRQQAEYFGADCSQRRCPTGDDPLTGGDDTDCEGVTAEGGFGVGQA 1278
            +P     +T+ F+   +  E D + V+L   T+G  E    +G D   G+L    E S  + WL +WE+G + E    +E S LR+            E  V+    + N I A CG  E+     I   SS    ++     T S  +G GCR    C  +G CDYC + C C EG G+ + +++ +    R DC+   CPSG SW      L G  R   E SHA+ ECS  G             C R+   C+C  G+ G AC+R +CP DCSG+G C +M ++G    A PL++ S                 +YG    S E  A W+  S++ CVCDSSWEVGLG GQ QQA+YFG DCS   CPTGDDP T  D+TDCE  TA+GG GVG A
Sbjct:  181 LPQTMTHITVGFQPARDLVEGDNVTVNLKGFTSG--EGNGTEGRDFLHGDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQALAPIPAGELHEVTVY----RSNGIRAQCGMGENETTSTISVVSSSDPPWNSTGEFTFSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPS-ELLHAPDVAR-DCSEMTCPSGVSWGP---VLAGSPRPDPETSHAMAECSNMGT------------CIRSFGICLCETGYAGRACERYACPEDCSGNGACRNMREMGMMRTAEPLVNSSTEASSSSRGDSADGFEVVYGWD--SPEGTATWESRSVFGCVCDSSWEVGLGRGQTQQAQYFGPDCSMLHCPTGDDPDTLIDETDCENKTADGGRGVGSA 555          
BLAST of mRNA_P-littoralis_Contig697.15.1 vs. uniprot
Match: A0A8J2WTH3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTH3_9STRA)

HSP 1 Score: 203 bits (516), Expect = 4.920e-57
Identity = 138/379 (36.41%), Postives = 184/379 (48.55%), Query Frame = 1
Query:  124 FWDTKVQVDPCCDVIPGEPLEVTIWFRTD----GNFSETDTLFVDLPRLTTGTVENMFNDGTDIGLGELEVSPSTLWLGAWEQGVFDEAS-PFETSRLRMVLRPDRTIDPESEEDVFMRISKRNRISAFCGWAE----DWVGFRIYTNSSGF--DDLAIETSPRLGDGCR--GDCYERGVCDYCHEACLCHEGQGNRTVDVVSSGGWTRLDCAHYVCPSGRSWAARPETLEGGGRGSLESHALEE--CSGNGRRENVDAHCFWQKCDRTSAACICADGFEGDACQR--NSCP--SDCSGHGVCLSMHDLGRTNEALPLMDVSNIYGGGVGSDEEVA-WDFESMYACVCDSSWEVGLGAGQRQQAEYFGADCSQRRCPTG 1200
            F DT + V+P     P E  E+ I F T     GN  + D ++V LP+ T G        G ++  GEL +SPS  + G W +G F+  + PF  S L + ++ + TI   +   V  RI + N I  +CG+      D   F ++TN+S        IE   R+G+GC    DC   G CD+C + C C  G+G    D   + G   +DC  + CP G  W + P +   GG      H  +   CSG G             C   S  C C DGF GDACQR  ++C     CSGHG CL MH L R  EALPL +  + YG      E    WD+ +M  C CDSSW VG G  + Q  EY+GADCS++RCPTG
Sbjct:   19 FTDTYLYVNP---TQPQEAAEIQIDFFTTYELTGNGIQGDVIYVQLPKFTIGGGGK--KPGPNVPRGELVISPSVYFEGRWIEGEFNNLTHPFPNSTLALYVQEEVTIPAGTSLRV--RIYRSNNIKVYCGYDRPQNTDNDFFLMWTNASKATGQQQQIEYGDRVGNGCSKISDCGLVGDCDFCQQKCYCWPGKGGS--DNYKNTG--SMDCTQFECPEGPRWGSMPLSETDGG------HVAQTMACSGAGL------------CIAESGECECFDGFTGDACQRRISTCGVGGKCSGHGQCLPMHHLARAKEALPLSEGMSSYGDDHTVREHTGTWDWNTMMGCACDSSWPVGFGPDEYQLGEYYGADCSKKRCPTG 368          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig697.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTJ0_ECTSI3.540e-17472.44EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2WUH0_9STRA2.270e-7339.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3NPQ7_9STRA1.830e-6836.87Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4T8L0_9STRA5.880e-6738.99Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2G565_9STRA2.200e-6637.73Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1UJF5_9STRA2.290e-6636.92Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2AMA5_9STRA3.000e-6642.65Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D7FTJ2_ECTSI8.540e-6285.09EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
D8LCI8_ECTSI1.300e-5937.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2WTH3_9STRA4.920e-5736.41Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig697contigP-littoralis_Contig697:84339..94525 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LCI8
PFAMsEGF_2
Model size1279
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons11
Evalue1.96e-60
EggNOG OGsKOG1225@1|root,KOG1225@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-21_001570.1
Descriptionregulation of canonical Wnt signaling pathway involved in osteoblast differentiation
Cds size1269
COG categoryL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig697.15.1prot_P-littoralis_Contig697.15.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig697 84339..94516 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791442.6077147-CDS-P-littoralis_Contig697:84338..844331680791442.6077147-CDS-P-littoralis_Contig697:84338..84433Pylaiella littoralis U1_48CDSP-littoralis_Contig697 84339..84433 -
1680791442.6186335-CDS-P-littoralis_Contig697:84952..850701680791442.6186335-CDS-P-littoralis_Contig697:84952..85070Pylaiella littoralis U1_48CDSP-littoralis_Contig697 84953..85070 -
1680791442.6347783-CDS-P-littoralis_Contig697:86077..862051680791442.6347783-CDS-P-littoralis_Contig697:86077..86205Pylaiella littoralis U1_48CDSP-littoralis_Contig697 86078..86205 -
1680791442.6462789-CDS-P-littoralis_Contig697:89965..900301680791442.6462789-CDS-P-littoralis_Contig697:89965..90030Pylaiella littoralis U1_48CDSP-littoralis_Contig697 89966..90030 -
1680791442.6574602-CDS-P-littoralis_Contig697:90269..904141680791442.6574602-CDS-P-littoralis_Contig697:90269..90414Pylaiella littoralis U1_48CDSP-littoralis_Contig697 90270..90414 -
1680791442.6723855-CDS-P-littoralis_Contig697:90928..910561680791442.6723855-CDS-P-littoralis_Contig697:90928..91056Pylaiella littoralis U1_48CDSP-littoralis_Contig697 90929..91056 -
1680791442.6834173-CDS-P-littoralis_Contig697:91834..919891680791442.6834173-CDS-P-littoralis_Contig697:91834..91989Pylaiella littoralis U1_48CDSP-littoralis_Contig697 91835..91989 -
1680791442.6928148-CDS-P-littoralis_Contig697:92446..925751680791442.6928148-CDS-P-littoralis_Contig697:92446..92575Pylaiella littoralis U1_48CDSP-littoralis_Contig697 92447..92575 -
1680791442.709581-CDS-P-littoralis_Contig697:93109..931711680791442.709581-CDS-P-littoralis_Contig697:93109..93171Pylaiella littoralis U1_48CDSP-littoralis_Contig697 93110..93171 -
1680791442.7215407-CDS-P-littoralis_Contig697:93573..937501680791442.7215407-CDS-P-littoralis_Contig697:93573..93750Pylaiella littoralis U1_48CDSP-littoralis_Contig697 93574..93750 -
1680791442.7315614-CDS-P-littoralis_Contig697:94449..945161680791442.7315614-CDS-P-littoralis_Contig697:94449..94516Pylaiella littoralis U1_48CDSP-littoralis_Contig697 94450..94516 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791442.7460694-UTR-P-littoralis_Contig697:94516..945251680791442.7460694-UTR-P-littoralis_Contig697:94516..94525Pylaiella littoralis U1_48UTRP-littoralis_Contig697 94517..94525 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig697.15.1

>prot_P-littoralis_Contig697.15.1 ID=prot_P-littoralis_Contig697.15.1|Name=mRNA_P-littoralis_Contig697.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=423bp
MLAQWCTSAVAGCFLLFLALAQELEEPYTDADKDRPKSFWDTKVQVDPCC
DVIPGEPLEVTIWFRTDGNFSETDTLFVDLPRLTTGTVENMFNDGTDIGL
GELEVSPSTLWLGAWEQGVFDEASPFETSRLRMVLRPDRTIDPESEEDVF
MRISKRNRISAFCGWAEDWVGFRIYTNSSGFDDLAIETSPRLGDGCRGDC
YERGVCDYCHEACLCHEGQGNRTVDVVSSGGWTRLDCAHYVCPSGRSWAA
RPETLEGGGRGSLESHALEECSGNGRRENVDAHCFWQKCDRTSAACICAD
GFEGDACQRNSCPSDCSGHGVCLSMHDLGRTNEALPLMDVSNIYGGGVGS
DEEVAWDFESMYACVCDSSWEVGLGAGQRQQAEYFGADCSQRRCPTGDDP
LTGGDDTDCEGVTAEGGFGVGQA
back to top

mRNA from alignment at P-littoralis_Contig697:84339..94525-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig697.15.1 ID=mRNA_P-littoralis_Contig697.15.1|Name=mRNA_P-littoralis_Contig697.15.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10187bp|location=Sequence derived from alignment at P-littoralis_Contig697:84339..94525- (Pylaiella littoralis U1_48)
TGGAGGTCCATGCTGGCTCAATGGTGCACTAGTGCTGTGGCTGGATGTTT TTTGCTGTTTCTGGCATTAGCACAAGGTAGGCCGAAGCTTTGGTCGGGGT GTCGGCATGTCCTCCAAAACTATTCGGTAAAATAACACGGATATCCTACA AATCATATACGGAGTTGTTACAAGTGGGTGCTTCCAAATCGGTGTGTACC GAAGGTCGTTGGCACACGGAGTATGATCTGCATGTGTCGGAAGATAACGG GCATCTTCTTTATGTTGTCTGATATGCGAGCAACCATGAAGTTCAATTAA CGTTCCTCCTGTGATCGAACCTCACGAGTGTCTTCATCGAGCCTCAGCGG CACCAGCGTCCGTGTAACAGAGTATTCGACTACAAAAGATTCGATCGGTC ACAACAAGGACCGTACCGGGGTCGCTGTTGTGTAGGGCTTGTTTCAAACG ATCTGAGACCAGGTACTACATGCTACTGCTGTATCCTTTACACACGGCGT CCAGAAGCCTACCTCCACAGTCGTAAACGAGCACCGCGAGTAGTGGTCAT ATCCGATCGATGCATCCACTGAGTTTTGCACAAAAGACAGGCACCCTATT GTCTTTATTTTGGACGCTCTGCGTACCTGGTTGGGAAACCCGCGTATTGC ATCCTGCAAGCCACACATCAATAGAGTCCCGTATGCCTCAGTAATATCGT TCTTCGCCCACGTCGGCTGCCCTCCTCAAACGCTACTCAAATGGCGTGCT TGACCGGTGGGCCATGGAACAACAGAGTTAGAGGAACCCTACACCGATGC CGACAAAGACAGACCGAAGTCCTTTTGGGACACCAAGGTGCAGGTAGATC CGTGCTGCGACGTCATTCCGGGAGAGCCACTGGAGGTCACCATATGGTTC AGAACGGATGGCAACTTCTCCGAGACAGACACACTTTTTGTCGATTTGCC GAGTGAGTGTGCCGCATGCGTTAGAAACCTGCCCTATGAGAGGTATTAAT ATGGTTCAATCGTGGTGCAAAGGAGGCAGGCGCCGACCTCAGGGCCAAGA TCGATGTGTCCAAAAAATGTACTTGTGCCCTCCTGCGTTTCAGAAAGTAT ATGATCATTTTGGGAGACTTTATTTGGCGTGTGTGCATGCAGTGGAGGTG TGAATCACGTAGAGAAAATACTCTGCGGCCCATAACCCTCCATCCCCATC CTTTCCGATTTGAACAGCACTGAGGGACCCGCCTGCCAGCTGGAAGTTCA TTCCATATGTTTGTTTGGGCTGCCAACGTCCTCCGATACTCTTTCAAAAA AGTGTGCATTTCTACTTATCTTTTGATTTCTTTGTTTTTGGTGATGCGGC ACAGGGCTCACAACGGGAACGGTGGAAAACATGTTCAACGACGGCACAGA CATCGGTCTCGGCGAGGTGAGTAGACCTCCTAAAGCTCATGGGCGTGCTT GATCTTTATTGGAAAAAAAGAAGGCGGATCTCTGACGGAGAAAAACCCTT GAACATTATCCACGCAAGCAGGTGTGAAATGGAAATCTGACCTTCCCTAG GGTGTGTGTTGTTGATGAATTACCAAAAGGCGTCAACCATGTTTTGACTG TGCAGAAAGCTCTGCCTTGTGGAAAAGAGAGGGAAATGTTATCGTGCGGC ACCGTGACTACGAGGTGTTCATATGATGGTTTCCGCGGTGACCAAGCTTA AACACCACAGGAAGGCCCTAACGCCATTTAATGAGCCTATCTCACATAGT TTTAAGGATTGCAGACAACCGCACATCTTAGTAGGATTCACCGCCAAATA AAATACATGCGTGAGGGTGCGTTCTGAATCTTCGAGTGGAGATGTGTGAC ACATTTTTCCATAGGCGTGCGAACTTTAGTTTGTGCCATGAATCTGACCA CATTTTACTGCGTTCACTAAAACAAATAACGCCCAAATCCTCCTTTGCAG CTGGAAGTTAGCCCGTCCACGCTATGGTTGGGCGCATGGGAGCAGGGGGT GTTTGACGAGGCGTCGCCATTCGAGACTTCACGCCTGAGAATGGTGTTGA GACCTGACAGAACAATTGATCCTGAATCGGTAAGGTCGCCCTGCGATTCG CTCAACGTGTTGAGGTGTCTATTGATATCAGTGTCGGAGTGAAGATACAA AAATAGCATGCTCTACAATTTAGCTTCAGCGGTACAGTATATCTCGAGGT GTTACTGGAGTTGATGCAGCCGGTAGGAAGAATGACTGAGGCAGTAGACT AAATTTGAATGGAACAGTGCATGGTCAGCATGTCACTGCAGTCGTGTGCG TCACATGCGTGTGTCATGTTGAAGGCGCTCTGAGGAACCGCCTGATGAAA GCCCACGTAGTCTGTTTATAGCTTGTGCTGTCGTAGATTAGTCTGTTTGC TTTCTCTAAGCACATTCGCTTCATCCCTATAAAGACGCCAGGTTTAAAAG ACTGCTTTAGCTATGCCGCATTTCCATGGTATGCCTCATTGCATGTGTCA TGCCGCTATTGTGTATGAATATGTCGAATTCAACAGGAGGAGGATGTATT CATGAGAATATCAAAACGCAACCGTATCTCGGCGTTCTGCGGGTGGGCGG AAGATTGGGTAGGCTTCCGAATATATACGAACTCTTCTGGCTTTGATGAT TTGGCCATCGAGACATCACCTCGGCTTGGCGACGGATGCCGGTACGCTAT GTATTCCAGTACAATACCTACGCATACGCTAAATTGACACATGTGCAAAA TTACCCTTGCACGGTGTATTTTCTCAAGCACCCTGATATACGGGAGTTAT TGTCTCGCGCGCGAGTGTTTGTGTGGTGAACTGCGTTTTCTTTTGTTCGG CGCTCCTTGGGCGTTCCCTAGTTTGGCGTGGATTCTGTATGTTGTGGAAA GCTAAACTGCTAGACTGCTGCTTCAAATGTCAGCTCGCCTTGCTGAAATG ACTGGCAAGTGTATGCGTTCCTCCATCTTGCATGTCGGTTGCAGACGGGT ATTTGCCCCCCTTTTGTGACACGTTTTGTTCATTCTTCCTGGTTGTACTG TATATTAGACGGAGGACAGAGCCATGGAGACGATTTAGTGCATCATCTCA GCCACACAGGCATGTCGACACTAACACGCTTATCGGACAGCTTTAATTAT GCGCTGCAGGGCGCAGATGTATGCACACAGCTACACAATGCAGAGTAGAG ATCTTCAGAAGTACGAGTACCTAAGACACAGACCCTGCCGACTCTTCCGC AACTTGTTGTATACCAGAAGCAAAAATCTAACAAAACTTTCTAGTGGGGT GACTGAATCGGGTAACGCAGACGATAGACAAGAGAAAATAACATCTCGTG GAACATTATTGCCATCAATATACCATTTTTTGTGATCCCCGCGGTGAACA TACCCAGGAAGTATGTGTCCCTTTCATACCTATTCACGTCACTGCCGCTT TGGGATGTATGTGATGCAGGGGGGATTGCTACGAACGAGGAGTATGCGAC TACTGCCACGAGGCTTGCCTGTGCCACGAGGGACAGGGAAACAGAACGGT TGACGTGGTGTCCAGCGGGGGGTGGACGCGCCTCGACTGCGCACATTGTG AGAGCAACAGCACTAGAATCAATGGTAGTGAGGGCATGACGGGCGAGGGG GGTTTTCTAGCTCGCGGAACAGATCGCGGAGCGACGATTGCTTTCAAACA ACACAAAATACAACAGCAATTTGCCCCTGCTACAGTTGGTCGACGTTGGA CCGCTCGATGCACGAAGACGGGGAGGATGGTGGTAGGTTTTTCGTCGAAC GATTTTTCGAACACGTTACACCACGATGAAGTAGGTACGCGGGCGGGAGA GGGCTAACTGATGTTGCGCGTGTAATTCTCTGCTTGCGAACACCGCGACG AAGATAGAGTAGAACCTCATAGCAGCAGCTTGATTAACTTCTCGTTGCGA CTGCGAAGGATTGCTTCTTGGTGCATACGCTTTGAACTCCCCGTCCGAAT GTTGTCACACGAATTCCCCCTTCCGAGTGTTTTGCCGCCGCACCACCTGA TGGAACAAAAACGCTAATACCATGTCCTCTCATATTGTAATCCTAACCCG GCGTGTATCAGATGTATGCCCCTCCGGAAGATCGTGGGCGGCACGGCCGG AGACCCTCGAGGGGGGGGGGCGGGGGTCCCTGGAGAGTCACGCTTTGGAG GAGTGCTCGGGGAACGGCAGGCGAGAGAACGTTGATGCGCACTGCTTTTG GCAGAAGTTCGTGATGCAGAGATCGGGTTTGATACAAGAGACTCAAGTGG TTGTATGCATCAAGTATCGAGTCTTGGTGAGGCATTGAGAAAGAAGAACT AGGCTAGCCGGATAAGTCGTCCATAGGTTAGTACACATCTCTCAGTGCTC GTCCGAGTCATGCGGCCGAATTTTGTTTTCACCGTTTCGTCTGTTCGTTC CTGTTGCCGCACGCTCCCGTTTCTTATGTTTATTTCTTAACGCAGGTGCG ACCGGACGAGCGCAGCGTGCATCTGCGCTGACGGGTTTGAAGGCGACGCC TGCCAAAGAAGTGAGCCAATGCCCCCATTGAATGCATCCGATAACAAGAT TTTATAATATGTTACGTTCGTACATAAATACAATAACATTTACCCATCGA CCCTTTCTTAAAACTCCTCTTGAGCTGCACACTACAGCCTCCCTCCTGGT CTGCGTGGCAAACCGCGAGAAAAAAACCCCTATACATGGCGAATTTTTTC AGGACGCCGAACACTCTTTGCCCCTGGGTAAGGTTGCAGGCAGATTAGTA CGGCCGCAACATCCCGGCGCGAGCCTCTCTGACGCCACTTAAACATCCTC TGCAACCTCAGCCTCACTTCAAAGGAAAGAGAAACGCAAGCTCATCATAC TTTTGTTCTGTTCCCAAACACCTCTCGTCAGCCTGCTCAAAACAAAAATA AAAACACGCAGCAAATATTTCTTGTTGTTCGCTTGGGCTCCCTCTGCTGA CTCCCGACAAGGGCCACCTGGGTGGCAGCATGGTTCCCTCCCATGGCAAC CCGCCGAAGGCAACATCAGGACTTTTCCATTTCTACCACTCACTACTCTT CCAGCCCTCACCCCCGGCACCACCATGCTCCGACAATCCCTCCTCCCCTT GCACCAACAAAAGTGCTTTGTTCCACTTTCCCGCGAGGGCCAGGGTCTCC ACCCTCCTAGAAACACTCCCCTCCTCCAGGTCCTCCTCCTCCTCACCGCC ACCGCTATTCCCAGCATCACCGTCGGCGGTTATCGCCATCGCTGCGTCCC GAACCATCGACAGCGCTCGCTCCCACTGCCCGCCTGCCGCGCACGCGTCG AGCGCCGCTCGGCACGTCGCCGGGGAGGGGTCGTGCTCCTCCCTCGCCCA CATCGTCTCGACCGTGACCAAGGCGGCGTCTGCCGTCCTCGCCGCCGCTT GCATCGTCGCAACGGCGGTACTGGGGGTAGGAGCAGCCGCGAGGGGGGCG TGTTGCGGATTGCTTTTACTCATGCCCGGCGGTGTTTCGGGAAGCTTTCC GAACAAAGGCGGCGCCTGCGATGGGGGGAGCTCGTTGTCCGTCGCCCCTG GAATGCCTGGGGAGGGTGGGTGGATGGGTACGTGGGCGGGTGGGTGGGTT AACTCAGATTGGGTGGCGGTATGTAGGCTGGAGGTGCGACGGCGGGGAGA GGAGCGTACGGATACCCGTACGGCCCCGGATTGAAGGCGATTCCTGATTC CAACACTAGACAGCACGGGCTACAACAGTATAGCTGACTGAGGAAGCTCT TCATACCTATAAAAGTGACGTTGTTGTGCTTTTTGGTGACGTGCTGCAGG ACGGAGAAGACGCTTTAATTTCTGTTCCGACGACCAAACGCAGCCAAGCT CGACCAGCACAGGCAATGGGGCCCGCACCTTCATGAACACCTTCAGATCG CACGTACCATTTGCACCGCCCTCAAGTGATACCCTACTGCTCAGATCACT CATATTGATGGTGAGCACTCTGCACCTACCGGTACCTGGCGGAGGGTTGC AGATATCAAGCAAAACATGTGTCTCGAACCTGGCACGATGCTCAGTCCCT CGGCTTCCATCTCCTGCAGGAGGTAGTCCACGTGTCTTTGTTCCCCCGCC CACCGGCACTCGGCTAACGCGGCTGTGTAAACCACGGCCCCCGGTTGGAC CATCTCTGCTTTCATCTGGCAATACGATGAGATTTTTGCGCACGGTAAAA AACTTCCACGGGGGTGCCAAGTTCACGCTCTTGTGTTATTTGTCGGAAGC GCAACGACCACCTGTTTAGCCCACTGCTGACTTTGAGAGAGACAGCCCAC AGGGCACGCATACTGCATGCGGAAAATGATCACTACAGCAGCAGTAGCAG CAGCAGCAGCAGCAATAGCAACAGCGAGAGCAGTGGTATCGTCCTTGGCA ATGGCCAGATGTGCGCCGCTTCTTCCCCGAATAAAACGCCGACGTCGTAT CAGCACCGTAGACTACTGAAAACATGCACTCCACTACTAGTGTGACTTGT GCGAGACCGGCAAAAAATTATGTCACAATATCACCACTGCTTTCAACAGC GCTGGCTTCCTGGAAAAATCCAGCAAACCCAACCTCGCCCTCCAACACAC TTACGTACCTCCTCCACGAGAAAGAGCGCCAGCTCCCACGGTACGACACT TTGCCCACCGAACGCGCGAGTGTAGCCCACGATGGCAGCACTTCTGCTGT AGAGCCCTTCGGCCCTCGTCATAGCAGCTCGACCGCACGATAAAGACCGC AGTGGCTGGGAGAACATGTGCCAGAACTCCTGGTCGAACACGGCTCTTCT TAGAAGCAGCACCTTGCCGAACGTGGCACTGCTGCAGCGGCTGCTCCTGT TGCAGTGGGTGCTGGAATATGTTGTGCACGTTACAGGACGGAAACAGACA TGTTGGCCGCGCCCGCGATTCGATGCGCTGGACGAAGCCGGTGCCGCCAA CTTCACAAGCCGACTGCGCCTAGTCGCTGCTACTCTGGGAAAAGAACCAG GACTGACCCGGCAAGAGATCTGCCGTGCTGCTCGCACCGTGCTAGACATG TCTCGCTGCGCCGTTCTCCTTCCGCCGTCCTCTGATGTGGACTACTGCTC TCGACTGCTGTTTTGCTGTTTTTGGCAATTTTTGTATGCTCGGTGGCACT GTGCGAACTCTGGAGAACGTATTTCGCAAGAGCTGGAAACCCGTAGTGCT TTTTTTTTTTTTTGCCTGTTTCCTGGTGATGTCCTTGTGTGTCTTGCGGT ACAAGAGTGGTTGGAGTGTCGGTGCTGTATGATGGTCTCGCGGTCTCGCG TGTTATAGCAACGCTGCGCTCTCAGCACTTCAGTGTACAATCTAGACGGA GTTCGCGAGCTAAGGTACCCTTACTGTGTATCACACCCGACTGACTGTCT CGGCACATTGGACATTCATGAATGGTGCATCATGCGGATACACGGATATG CCCTTCGCATCTTGGGCAAGATCGTGCCGTTTGCCGTTGCCCCGACCGAG GAGACACATCTCTAAACCCCAAACGTTCACGACTCTTTTTTTTTCTTAAA AGCTGTTTGACTGAAGAATAGCGTAAGCGTCATTTTGTTGCGGTAGCAGA GATACGCAGTGCTCCTTCACGTGTGTAGTTTAGAATATTTCGCGTAGTGC TCCTTCACGTGTAGTTCGGAATTTTTCGCGCACCGGCACAAACCGGTCGC CCCGGTGGACTAGTGGTCCCCTCGTTAACCACTAGATGCAGAGGAACGGG GGTTCGATTCCCGATGAATGTCTTCCTTTGCTACTTTGAAAGCGGCTATG CTGTTAATAAAAGCAGATTCGGCTTCGCCGACGAGGGTAGGGACCGCGGA TCCCTGCTCGCGAGAAAAAATCTCACGCATGTACCGCAGAAGGAAGGTGG GGGTAACTCCTCCTGTGTTGACCTTCCTCCTGTGTGACCCCGTCGATGGA CCTAGCCTGTAGTTTGAACCGCAGGGTGCAGACTAGTGTGCCAGAGAATA TGGGATGACAACACACTGCTGTGCGTGTGTATATTTCTGCATGTTTTGCC ACATGCGCCGCCTCTGTAGGTTGTGATATTTAGTACCTATTTTCTCTCAC GTTGAGAATTTGGTTTGCTGCAATATACCTCCTGCTTTACGCGTTTTGCC TGCGGCAAAATCAGTGCCAGCTCCTAGCTATTCAACCAGATCCATCCATA CTTCAGAGCCCAGTCCAAGGTTTTCATTTCACCGGCGGTCGTACAACGTT TCCCCCTCCTGCCGTTGCAGATTCCTGCCCGTCGGATTGCTCGGGCCATG GGGTGTGTCTTAGCATGCACGACTTAGGCCGAACCAACGAGGCACTGCCA CTCATGGATGTGTCCAACATTTACGGTGGTGGTGTAGGCTCCGATGAGGT GCAGTAAATTGGAATATGTAAAATCCTGTGGGGAGGACGAGTACGATAGA GTAAAAATGTGTGGTGCGATTCTCCGCAGAGTAATTTTTCACGGGGAGCG GTAGGTTCGAGTGTTGGTCCAAGCGCATTTATTTTCGATCCACAGTGCAC CGTAACAGCACATGGCCTCAACTGCTGATGCGAGAGACTTTGAGGTACAC AAAACCACGACGTTTACCACGTGAAAAGTTTTCAATGTGTCACACAAAGA ACAAACACCACTAATAATCCTGCCAAGTTTTTTGACATCAATTTCCACGC CACCGTCCTCATCTCGTGCTACGAGCATCCGGTGACCAAGGAGTAGAGGG GTGGGGGCGATTTGCTACGGCCTTAGGCTGTCCTACTAGAATCTATATCG TCGACCAAAAAAAAAAACAATGTAATAGATCCTAGTAGTACAGCCCAAGG CCGTAGCAAACCGCCCCACCTTACTCTTTGGCCACCGGATGCTCGTGCCA CGATATGAGGACCGTGGCGTCGAAATTGATGACAAAAAGTTGGCAGGATT ATAAAATCTGCCAACGTTGGCAGGATAAAAAACTGCCCATGTTGGCCGGT TTATCTTGATTGTTTTTTCTACTTTTGTCAGACAGCAGACGCAATATAGT ACATCGTGGAGTAGTTAGCCGAAACGTCTACGACGGTGAAGCTCGTCAAA TAGATTTTTCACGCAAACAATCCTGTATTTCGAAGACGATTCACCTGGAA AGTACGCGTTTTTTTACTTTCTGCCGCTTCTTTCTCCCTCCCAACGTCCC CACATTCTCCTTCTAGACAATAGCACTTCGTTAAATTAAATTTTTAGGAA GTCATTGAACACGACTGAACGGAAACCTTCTGATGAAAATATTGCACCGC ACGGGTGCATAGTAGCCCGGCCGTCCAGCTCAGCCTCCCCCCCCTAAGGT AATTCTCATTTTACCGGCCTCCTTTTTGCTTTCGTACTTGCTTGATCGAA TTCAGGAAGTGGCCTGGGACTTCGAGTCGATGTACGCCTGCGTTTGTGAT TCGTCTTGGGAAGTCGGTCTAGGTGCTGGGCAGCGGCAGCAGGCTGAATA TTTCGGGGCGGACTGTTCTCAACGTAAGCCTTTCGGCATCATGGCTGTCT CTACAGCGATGTGGTTCATGTAACCACCTCTCCAAAACACACGCCGCAAT ATATTTCGTAGCGGGGAGTAGTGTCGAGAATAGTCCATTCGGCGGGCACA ATGCTTGAGATTGGTGCCCCTTTAATTCGCAACTCGGGGGTGCTTCGTCA ATGGCTGGATATTTTGCAACAGATCAGAGAATTTAGCACAAAGCCCGTGT TACATCTGGCGAGATGAATCTGCTTCCACCGCCACCACTGTGATTCAGAA CGGTATCAATTGACCACAGCTTGGAAAGGTCGTGTCGTCATACACTCGGC AAAGTAGGAAACACTGTCAAGTAATTCTTCCATCCGGGGCGCTGCGTAGC TAGCAGATAGCTTCCGAGCGGCAAGGTCGAAAAGAAGGGCGGATCAGATA AATTATTTCAGACTTCGGTTTTAAAACTAACGCGTTATGTTCCATGTTTT CATGGTTTCTCCAATTTGTGAGCCAATGGTGTACATTTTCAGGAAGGTGT CCTACTGGAGATGACCCGTTGACAGGCGGAGATGACACGGATTGCGAAGG GGTCACGGCCGAAGGTGGCTTCGGGGTGGGGCAGGCG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig697:84339..94525-

>mRNA_P-littoralis_Contig697.15.1 ID=mRNA_P-littoralis_Contig697.15.1|Name=mRNA_P-littoralis_Contig697.15.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1269bp|location=Sequence derived from alignment at P-littoralis_Contig697:84339..94525- (Pylaiella littoralis U1_48)
ATGCTGGCTCAATGGTGCACTAGTGCTGTGGCTGGATGTTTTTTGCTGTT
TCTGGCATTAGCACAAGAGTTAGAGGAACCCTACACCGATGCCGACAAAG
ACAGACCGAAGTCCTTTTGGGACACCAAGGTGCAGGTAGATCCGTGCTGC
GACGTCATTCCGGGAGAGCCACTGGAGGTCACCATATGGTTCAGAACGGA
TGGCAACTTCTCCGAGACAGACACACTTTTTGTCGATTTGCCGAGGCTCA
CAACGGGAACGGTGGAAAACATGTTCAACGACGGCACAGACATCGGTCTC
GGCGAGCTGGAAGTTAGCCCGTCCACGCTATGGTTGGGCGCATGGGAGCA
GGGGGTGTTTGACGAGGCGTCGCCATTCGAGACTTCACGCCTGAGAATGG
TGTTGAGACCTGACAGAACAATTGATCCTGAATCGGAGGAGGATGTATTC
ATGAGAATATCAAAACGCAACCGTATCTCGGCGTTCTGCGGGTGGGCGGA
AGATTGGGTAGGCTTCCGAATATATACGAACTCTTCTGGCTTTGATGATT
TGGCCATCGAGACATCACCTCGGCTTGGCGACGGATGCCGGGGGGATTGC
TACGAACGAGGAGTATGCGACTACTGCCACGAGGCTTGCCTGTGCCACGA
GGGACAGGGAAACAGAACGGTTGACGTGGTGTCCAGCGGGGGGTGGACGC
GCCTCGACTGCGCACATTATGTATGCCCCTCCGGAAGATCGTGGGCGGCA
CGGCCGGAGACCCTCGAGGGGGGGGGGCGGGGGTCCCTGGAGAGTCACGC
TTTGGAGGAGTGCTCGGGGAACGGCAGGCGAGAGAACGTTGATGCGCACT
GCTTTTGGCAGAAGTGCGACCGGACGAGCGCAGCGTGCATCTGCGCTGAC
GGGTTTGAAGGCGACGCCTGCCAAAGAAATTCCTGCCCGTCGGATTGCTC
GGGCCATGGGGTGTGTCTTAGCATGCACGACTTAGGCCGAACCAACGAGG
CACTGCCACTCATGGATGTGTCCAACATTTACGGTGGTGGTGTAGGCTCC
GATGAGGAAGTGGCCTGGGACTTCGAGTCGATGTACGCCTGCGTTTGTGA
TTCGTCTTGGGAAGTCGGTCTAGGTGCTGGGCAGCGGCAGCAGGCTGAAT
ATTTCGGGGCGGACTGTTCTCAACGAAGGTGTCCTACTGGAGATGACCCG
TTGACAGGCGGAGATGACACGGATTGCGAAGGGGTCACGGCCGAAGGTGG
CTTCGGGGTGGGGCAGGCG
back to top