mRNA_P-littoralis_Contig695.25.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig695.25.1
Unique NamemRNA_P-littoralis_Contig695.25.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig695.25.1 vs. uniprot
Match: D7G4V8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V8_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 3.260e-127
Identity = 480/1045 (45.93%), Postives = 544/1045 (52.06%), Query Frame = 1 
Query: 1174 EEGVLLPGPEGGVEVREFGGSFLVVRRSEEEKRRSPERLNLHRRRLKSCPIIQGDVSLRLLNFQNNLISKITNLANLPNLIFIDLYNNLIDTLEGPLSAVTALRVIMAXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMEGLNNLQDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQECSCIFSVRSLLELGLDGNPVASQSAHGSSYRRYILHHLPSLRHLDRKKLTEHDQQLSKQ----------EREQEYDGRRKSSTALANTRVRENXXXXXXXXXXXXX-PSTTS--GATGNNFKNINRSSNSND-LPVLLNSKXXXXXXXXXXXXXPAPTSSKVANQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGTET---GERVNSGSRADLRTAAR----GGSGGMSRAAEAREAVATKRAKVDREERERTALRERRQAIEAARECWERRGRGSEGSNRANCTRRRSTARDIPCNAKDVNNXXXXXXXXXXXXXXXXXXXXXXXSSLLSPAATRHT-PNEIPFSAVSGGEGPPPRSP-----RSSAHLSRQPAPSPGNPGGGNRAREGRGVRDTAGGGGGTARGGSSGR------GVGYFELEQRLSVDEARAGSDASSLSS-GGRAPGITLKVYGDVWRWLVDGKVCALREQVVEARFSLVHVTSVARKAVAIAQTFPNLSCLQLLDNDIRSLKQLERLQPILRGLATLHLGKNSLVKNASETALRAWVKAQGPLLTIPPPAVTGWFGDGRNYFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGCTSGAATLGVGASDASGEXXXXX------CRSTAAVTTSPTSSAALGFETPSSG---------LFERACATTTR----IIDQSSDTAGASAVGRSVQSRGADSTLTAADAAFERLAEARSRAASSSWGAIALPGLQAAEVNVSRISGGGRGTEAARDSGGSAWAASARGAKLACNTVV 4149
            E GVLLPGPEGGVEVREF G  L+VRRSE+ K+RSPERLNLHRR L SCPIIQGD  LRLLN+QNNLI+KITNLANLPNLIFIDLYNN+IDTLEGPLS +TALRV+M            XXXXXXXXXXXXXXXX  M GL+ LQD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          GNPVA Q+  GSSYR YIL HLP+L HLD K++T+H Q +S Q           R    D  R+S     N R R                PS TS  G  G +    NR+  SND  PVLL                  P SS  + Q XXXXXXXX                                           +T   GE   +G  +  R A +        GMSRAAEAREAVA KRAK DR+ERE+TAL+ERR+AIEAARECWERRG GS  S RA    R  ++RD     KD  +                           SP+ +  T PN    S   GG  PP   P     RS     R+ + S       N   E  GV  T GG GG  R G++GR      GVGYFELEQRL  +    G  A+S     G A GITLKVYGDVWRWL DGKVC+LREQVVEARFSLVHVTSVARKA  IAQTFPNLSCLQLLDNDIRSL+QLERL+P+L  L  LHLGKN + +NASE ALRAWVK QGP +++  P   G   DGR+   G                                                            G   G  +      +   E             +T           + G   P SG           ER    T R     +++S++TA ++A+ R V+    D  L + DAAFERLAEARSRAASSSWGAIAL G   A        G            G AWA+SARGAKLACN +V
Sbjct:   66 ENGVLLPGPEGGVEVREFQGGVLLVRRSEDAKKRSPERLNLHRRWLTSCPIIQGDNRLRLLNYQNNLITKITNLANLPNLIFIDLYNNVIDTLEGPLSTMTALRVMMVGKNKIQKISNLXXXXXXXXXXXXXXXXXXMVGLDGLQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXY-------------------------GNPVAGQNGLGSSYRSYILQHLPNLHHLDLKRVTDHGQSISHQGSDGNLAPPTTRTASADDARESRGGGNNGRSRTAFHEAMGNSGKGSRKPSGTSRTGGNGVSTSGTNRNERSNDGFPVLLGQGSADTQSRAEHH----PGSSLSSPQXXXXXXXXXSRGGDDPRGLHRAGPVMSAPAPDKGAIGSDGRVRGGAWEQLSQQTMAAGECAITGGDSSTRAARKEVVLAVGNGMSRAAEAREAVALKRAKTDRDEREKTALKERREAIEAARECWERRGGGSITS-RA----RHRSSRDSTSTGKDNTSRKTSAHVKPPPAS--------------SPSCSAPTGPNPADSSNTGGGAVPPRPEPPXXXXRSPTXXXRRTSSSA------NTGSEVAGVARTGGGVGGR-RSGNAGRRGSISGGVGYFELEQRLRHNRMGVGDVAASGGGVPGGAGGITLKVYGDVWRWLGDGKVCSLREQVVEARFSLVHVTSVARKASTIAQTFPNLSCLQLLDNDIRSLRQLERLRPMLTNLTALHLGKNPVTRNASEAALRAWVKGQGPCVSLVSPG-HGPASDGRSICTGDRRQYTQQQQQHCPLTNASASQQQYSPPSTPTTQATPPLPAAPTPHPPCGTGSNNAKPLGGSDVGVPSRNSNGHEKGCEKTTIRILERGEAGNTVIAARKDKQMQSNGDNKPGSGGIIEQSTRSASERQSGPTVRSQHTAVNESNNTAASAALVR-VECTDRD-PLVSTDAAFERLAEARSRAASSSWGAIALAGSSTASHLGDDPDG----------VNGMAWASSARGAKLACNGMV 1042
[Close]
BLAST of mRNA_P-littoralis_Contig695.25.1 vs. uniprot
Match: A0A6H5JFV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV0_9PHAE)

HSP 1 Score: 404 bits (1037), Expect = 4.740e-117
Identity = 440/1069 (41.16%), Postives = 507/1069 (47.43%), Query Frame = 1 
Query: 1171 EEEGVLLPGPEGGVEVREFGGSFLVVRRSEEEKRRSPERLNLHRRRLKSCPIIQGDVSLRLLNFQNNLISKITNLANLPNLIFIDLYNNLIDTLEGPLSAVTALRVIMAXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMEGLNNLQDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQECSCIFSV-------------------RSLLELGLDGNPVASQSAHGSSYRRYILHHLPSLRHLDRKKLTEHDQQLSKQ----------EREQEYDGRRKSSTALANTRVRENXXXXXXXXXXXXX-PSTTSGATGNNFKNINRSSN--SND-LPVLLN-------SKXXXXXXXXXXXXXPAPTSSKVANQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAT-GTETGERVNSGSRADLRTAARGGSGGMSRAAEAREAVATKRAKVDREERERTALRERRQAIEAAR--ECWERRGRGSEGSNRANCTRRRSTARDIPCNAKDVNNXXXXXXXXXXXXXXXXXXXXXXXSSLLSPAATRHTPNEIPFSAVSGGEGPPPRSPRSSAHLSRQPAPSPGNPGGGNRAREGRGVRDTAGGGGG-----TARGGSSGRGVGYFELEQRLSVDEARAGSDASSLSSGGRAP----GITLKVYGDVWRWLVDGKVCALREQVVEARFSLVHVTSVARKAVAIAQTFPNLSCLQLLDNDIRSLKQLERLQPILRGLATLHLGKNSLVKNASETALRAWVKAQGPLLTIPPPAVTGWFGDGRNYFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGCTSGAATLGVGASDASGEXXXXXCRSTAAVTTSPTSSAAL----------------GFET----PSSGLFERACATTTR----IIDQSSDTAGASAVGRSVQSRGADSTLTAADAAFERLAEARSRAASSSWGAIALPGLQAAEVNVSRISGGGRGTEAARDSGGSAWAASARGAKLACNTVV 4149
            +E GVLLPGPEGGVEVREF G  L+VRRSE+ K+RSPERLNLHRRRL SCPIIQGD  LRLLN+QNNLISKITNLANLPNLIFIDLYNN+I+TLEGPLS +TALRV+M  XXXXXXXXXXXXXXXXXXXXXXXXXX  M GL+ LQDL                                                         +  SC+ ++                   RSL+EL L GNPVA Q+  GSSYR YIL HLP L HLD K++T+H Q +S Q           R    D  R+S     N R R                PS      GN F     +SN  SND  PVLL        S+       XXXXXX         +Q                                                   G   G+     +R  +  A      GMSRAAEAREAV  KRAK DREE E+TAL+ERR+AIEAAR  ECWERRG GS  S RA    R    RD     KD  +             XXXXXXXXXX                          P P S R+S+                N   E  GV  T GG GG     T R GS   GVGYFELEQRL       G  A+S   GG  P    GITLKVYGDVWRWL DGKVC+LREQVVEARFSLVHVTSVARKA  IAQTFPNLSCLQLLDNDIRSL+QLE L+P+L  L  L+LGKN + ++ASE ALRAWVK QGP +++  P   G   DGRN   G                                                                G   +GV +  ++G        +   +      +  +                GFE      +    ER    T R     +++S++T  ++A+ R +     D  L + DAAFERLAEARSRAASSSWGAIAL G   A    S +S    G          AWA+SARGAKLACN +V
Sbjct:   65 DENGVLLPGPEGGVEVREFHGGVLLVRRSEDAKKRSPERLNLHRRRLTSCPIIQGDNRLRLLNYQNNLISKITNLANLPNLIFIDLYNNVINTLEGPLSTMTALRVMMVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGGLDGLQDLRVLNLAGNEIKSFLPRSVWRRRYYFPNVMIEGNIDRSNQLDQCLPFRVV--------KNVSCLTALTELNLRRNNVEKPLTPQTSRSLMELSLFGNPVAVQNGLGSSYRSYILQHLPKLHHLDLKRVTDHGQSISHQYSDGNMAPSTTRTASADDARESRGGGNNGRSRTAFHETMGNSGKGSRKPSGAWRTGGNGFSTSGTNSNEGSNDGFPVLLTHGSADTQSRGEHHSGSXXXXXXXXXXXXXXXSQGGDDPRGLHRAGPVMSAPAPDKGAIGSDGMVRGGAWEQVTVFVQTMGAGECGITAGDSSRGAARKQVVLAV---GTGMSRAAEAREAVTLKRAKTDREEWEKTALKERREAIEAARRAECWERRGGGSITS-RA----RHRNPRDSTTAGKDSTSRKTSAHVKPPPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPTPPSRRTSSLA--------------NTGSEVAGVTRTVGGVGGRRSRDTGRRGSISGGVGYFELEQRLRHKSMGVGDVAAS---GGGVPSGAGGITLKVYGDVWRWLGDGKVCSLREQVVEARFSLVHVTSVARKASTIAQTFPNLSCLQLLDNDIRSLRQLEHLRPMLTNLTALYLGKNPVTRSASEAALRAWVKGQGPCVSLVSPG-HGPASDGRNVCTGDRRLHTQQQQQSPLTNAFAGQQHSSPPSTPTTQAAPPLPAAPTPHPPCGTGTNNVKPL------GGGDMGVPSRHSNGHENGCEKTTIRVLEQGEAGNTVIAARQDKKMQCNGDNMPGFEDIVEQSTRSASERQSGPTVRSEHTAVNESNNTPASAALVR-IDCTDRD-PLASTDAAFERLAEARSRAASSSWGAIALAGSSTA----SHVSDDPDGVN------DMAWASSARGAKLACNGMV 1081
[Close]
BLAST of mRNA_P-littoralis_Contig695.25.1 vs. uniprot
Match: A0A4Q3SRM7_9BACT (Uncharacterized protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4Q3SRM7_9BACT)

HSP 1 Score: 115 bits (287), Expect = 2.880e-23
Identity = 154/229 (67.25%), Postives = 180/229 (78.60%), Query Frame = 1 
Query: 1240 LVVRRSEEEKRRSPERLNLHRRRLKSCPIIQGDVSLRLLNFQNNLISKITNLANLPNLIFIDLYNNLIDTLEGPLSAVTALRVIMAXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMEGLNNLQDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQECSCIFSVRSLLELGLDGNPVASQSAHGSSYRRYILHHLPSLRHLD 1926
            LVV R+ EE+ R+PERLNL RR+L+ CP+++ +  LRLLN+QNN I  ITNL NLPNLIF+DLYNN I TLEGPL  V  L     XXXXXXXXXXXXXXXXXXXXXXXXXXX+ +EGL  L DL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      ++ +  CIF+++SL+EL LD NP+  +   G+ YR  +L +L SL+HLD
Sbjct:  170 LVVFRTAEERLRNPERLNLDRRQLEFCPLLEQEQRLRLLNYQNNNIKYITNLENLPNLIFLDLYNNKIITLEGPLCQVRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVIEGLEGLSDLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHNFIQAYVDIQCIFNIQSLIELSLDNNPLVEKE--GAGYRYTVLAYLSSLKHLD 396
[Close]
BLAST of mRNA_P-littoralis_Contig695.25.1 vs. uniprot
Match: F0YI54_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI54_AURAN)

HSP 1 Score: 108 bits (271), Expect = 3.130e-20
Identity = 138/269 (51.30%), Postives = 174/269 (64.68%), Query Frame = 1 
Query: 1198 PEGGVEVREFGG--SFLVVRRSEEEKRRSPERLNLHRRRLKSCPIIQGDVSLRLLNFQNNLISKITNLANLPNLIFIDLYNNLIDTLEGPLSAVTALRVIMAXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMEGLNNLQDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQECSCIFSVRSLLELGLDGNPVASQSAHGSSYRRYILHHLPSLRHLDRKKLTEHDQQLSKQEREQEYDGRR 1998
            P  GV   ++ G    LVV RS EE+  +PERLNL RR L  CPI++ +  +RLLN+QNN I +I +L++LPNLIF+DLYNN I++L   L  V  LRV+M                  XXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         SF   +C+F VR L+EL +DGNP+A Q  H  +YRR+ +  + +LRHLD K++T+ +++    E ++E + RR
Sbjct:  292 PSDGVFFAQYKGHPETLVVYRSPEERAANPERLNLDRRHLTVCPILKSEERVRLLNYQNNYIEEIRHLSHLPNLIFLDLYNNCIESLSRDLECVPTLRVLMLGKNRIKAISHLEKLGKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFLSNNRVQSFDAVACLFDVRFLMELSMDGNPIALQDPH--AYRRFAVERVKTLRHLDLKRVTDAERRAVALESQKEDERRR 558
[Close]
BLAST of mRNA_P-littoralis_Contig695.25.1 vs. uniprot
Match: A0A8J2SSU8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSU8_9STRA)

HSP 1 Score: 104 bits (260), Expect = 6.450e-19
Identity = 132/253 (52.17%), Postives = 163/253 (64.43%), Query Frame = 1 
Query: 1240 LVVRRSEEEKRRSPERLNLHRRRLKSCPIIQGDVSLRLLNFQNNLISKITNLANLPNLIFIDLYNNLIDTLEGPLSAVTALRVIMAXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMEGLNNLQDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQECSCIFSVRSLLELGLDGNPVASQSAHGSSYRRYILHHLPSLRHLDRKKLTEHDQQLSKQEREQEYDGRR 1998
            LVV RS EE+  +PERLNL RRRL  CPI++ +  +RLLN+Q+N I +I NL +LPNLIF+DLYNN I+ L   L  V  LRV+M                    XXXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        SF    C+F +R L+EL +DGNP+A Q    ++YRRY++     LR LD K++T+ +++L   E ++E   +R
Sbjct:  201 LVVYRSPEERAANPERLNLDRRRLTVCPILKSEEQVRLLNYQSNYIKEIQNLVHLPNLIFLDLYNNRIENLSHDLGCVPTLRVLMLGKNRIRAISHLDKLVKLDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSNNCIQSFDSIVCVFGIRCLMELSMDGNPIALQDP--TTYRRYVIEQAKKLRLLDLKRVTDAERRLVALESQKEVQRKR 451
[Close]
BLAST of mRNA_P-littoralis_Contig695.25.1 vs. uniprot
Match: A0A7S1XLY3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLY3_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 9.730e-17
Identity = 130/237 (54.85%), Postives = 163/237 (68.78%), Query Frame = 1 
Query: 1234 SFLVVRRSEEEKRRSPERLNLHRRRLKSCPIIQGDVSLRLLNFQNNLISKITNLANLPNLIFIDLYNNLIDTLEGPLSAVTALRVIMAXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMEGLNNLQDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQECSCIFSVRSLLELGLDGNPVASQSAHGSSYRRYILHHLPSLRHLDRKKLTE 1944
            S LVV R+E E+  +PERLNL RR+L SCPI++ +  L+LLN+QNN IS +T L  L NLIF+DLYNN I+ L   LS+V +LRV+M                 XXXXXXXXX    +E        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       F + + +  +++L+EL LDGNP++   A  S YR Y++ ++P+LRH D K+++E
Sbjct:  237 SVLVVYRTEGERNANPERLNLDRRQLTSCPILENEDRLKLLNYQNNYISSVTALEPLTNLIFLDLYNNCIEELGPGLSSVPSLRVLMLGKNRIRRIANLERLRNXXXXXXXXXEISKIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNCVGRFADVASLLRIKALVELALDGNPISRIWA--SHYRPYVVTNVPTLRHFDLKRVSE 471
[Close]
BLAST of mRNA_P-littoralis_Contig695.25.1 vs. uniprot
Match: UPI0018D713E7 (leucine-rich repeat-containing protein 49-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D713E7)

HSP 1 Score: 82.4 bits (202), Expect = 6.000e-15
Identity = 45/84 (53.57%), Postives = 64/84 (76.19%), Query Frame = 1 
Query: 1243 VVRRSEEEKRRSPERLNLHRRRLKSCPIIQGDVSLRLLNFQNNLISKITNLANLPNLIFIDLYNNLIDTLEGPLSAVTALRVIM 1494
            V+ RS+EE+  +P+RLNL RRRL  CPI++G+  LRLLNFQ+N I KI +L +L  LIF+DLY+N ++ + G L A+ +LRV+M
Sbjct:   22 VIYRSQEERSANPDRLNLDRRRLTVCPILEGEEHLRLLNFQHNSIRKIEHLTSLRRLIFLDLYDNQLEDITG-LGALKSLRVLM 104
[Close]
BLAST of mRNA_P-littoralis_Contig695.25.1 vs. uniprot
Match: A0A7S2F339_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F339_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.550e-14
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 1 
Query: 1243 VVRRSEEEKRRSPERLNLHRRRLKSCPIIQGDVSLRLLNFQNNLISKITNLANLPNLIFIDLYNNLIDTLEGPLSAVTALRVIM 1494
            VV RS  E+   PERL L RR L  CP+++ +  +RLLN+QNN I +I  L NLPNLIF+DLYNN I+ +   LS V  LRV+M
Sbjct:   16 VVFRSNSERTNDPERLTLERRGLVCCPVLKLEDRVRLLNYQNNFIERIDALRNLPNLIFLDLYNNCIEEMSDELSFVPTLRVLM 99
[Close]
BLAST of mRNA_P-littoralis_Contig695.25.1 vs. uniprot
Match: A0A1S3J082_LINUN (uncharacterized protein LOC106168945 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J082_LINUN)

HSP 1 Score: 81.6 bits (200), Expect = 3.260e-13
Identity = 43/84 (51.19%), Postives = 67/84 (79.76%), Query Frame = 1 
Query: 1243 VVRRSEEEKRRSPERLNLHRRRLKSCPIIQGDVSLRLLNFQNNLISKITNLANLPNLIFIDLYNNLIDTLEGPLSAVTALRVIM 1494
            +V R+ EE+  +P+RLNL RRRL  CPI++G+  LRLLN+Q+N+I++I +L++L  LIF+DLY+N I+ + G L+A+ +LRV+M
Sbjct:  161 IVYRTPEERAANPDRLNLDRRRLAVCPILEGEEQLRLLNYQHNVITQIQHLSSLKRLIFLDLYDNHIEEISG-LTALRSLRVLM 243
[Close]
BLAST of mRNA_P-littoralis_Contig695.25.1 vs. uniprot
Match: A0A7S4N260_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4N260_GUITH)

HSP 1 Score: 85.5 bits (210), Expect = 4.970e-13
Identity = 42/65 (64.62%), Postives = 53/65 (81.54%), Query Frame = 1 
Query: 1231 GSFLVVRRSEEEKRRSPERLNLHRRRLKSCPIIQGDVSLRLLNFQNNLISKITNLANLPNLIFID 1425
            G  LV+ RS+EEK  +PERLNL RR+L  CP+++G+  LRLLN+QNNLISK+ NL NLPNLIF+D
Sbjct:  211 GGQLVINRSKEEKFSNPERLNLDRRKLTCCPVLEGEEKLRLLNYQNNLISKVENLDNLPNLIFLD 275
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig695.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4V8_ECTSI3.260e-12745.93Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JFV0_9PHAE4.740e-11741.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4Q3SRM7_9BACT2.880e-2367.25Uncharacterized protein n=1 Tax=Chitinophagaceae b... [more]
F0YI54_AURAN3.130e-2051.30Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2SSU8_9STRA6.450e-1952.17Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1XLY3_9STRA9.730e-1754.85Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
UPI0018D713E76.000e-1553.57leucine-rich repeat-containing protein 49-like n=1... [more]
A0A7S2F339_9STRA2.550e-1453.57Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A1S3J082_LINUN3.260e-1351.19uncharacterized protein LOC106168945 n=1 Tax=Lingu... [more]
A0A7S4N260_GUITH4.970e-1364.62Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig695contigP-littoralis_Contig695:70645..81986 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G4V8
PFAMsLRR_8,LRR_9
Model size4227
Max annot lvl2759|Eukaryota
KEGG koko:K16606
Hectar predicted targeting categoryother localisation
Exons12
Evalue5.34e-128
EggNOG OGsCOG4886@1|root,KOG0531@2759|Eukaryota
Descriptionaxoneme assembly
Cds size4227
COG categoryL
BRITEko00000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig695.25.1prot_P-littoralis_Contig695.25.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig695 70645..81986 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791441.2657287-CDS-P-littoralis_Contig695:70644..707251680791441.2657287-CDS-P-littoralis_Contig695:70644..70725Pylaiella littoralis U1_48CDSP-littoralis_Contig695 70645..70725 -
1680791441.2774522-CDS-P-littoralis_Contig695:71181..720811680791441.2774522-CDS-P-littoralis_Contig695:71181..72081Pylaiella littoralis U1_48CDSP-littoralis_Contig695 71182..72081 -
1680791441.2905464-CDS-P-littoralis_Contig695:72404..730621680791441.2905464-CDS-P-littoralis_Contig695:72404..73062Pylaiella littoralis U1_48CDSP-littoralis_Contig695 72405..73062 -
1680791441.3028002-CDS-P-littoralis_Contig695:74252..745631680791441.3028002-CDS-P-littoralis_Contig695:74252..74563Pylaiella littoralis U1_48CDSP-littoralis_Contig695 74253..74563 -
1680791441.3119552-CDS-P-littoralis_Contig695:75461..759241680791441.3119552-CDS-P-littoralis_Contig695:75461..75924Pylaiella littoralis U1_48CDSP-littoralis_Contig695 75462..75924 -
1680791441.3241813-CDS-P-littoralis_Contig695:76590..766881680791441.3241813-CDS-P-littoralis_Contig695:76590..76688Pylaiella littoralis U1_48CDSP-littoralis_Contig695 76591..76688 -
1680791441.334533-CDS-P-littoralis_Contig695:77411..774811680791441.334533-CDS-P-littoralis_Contig695:77411..77481Pylaiella littoralis U1_48CDSP-littoralis_Contig695 77412..77481 -
1680791441.3470168-CDS-P-littoralis_Contig695:77741..778691680791441.3470168-CDS-P-littoralis_Contig695:77741..77869Pylaiella littoralis U1_48CDSP-littoralis_Contig695 77742..77869 -
1680791441.3565352-CDS-P-littoralis_Contig695:79125..793111680791441.3565352-CDS-P-littoralis_Contig695:79125..79311Pylaiella littoralis U1_48CDSP-littoralis_Contig695 79126..79311 -
1680791441.3670464-CDS-P-littoralis_Contig695:79691..803901680791441.3670464-CDS-P-littoralis_Contig695:79691..80390Pylaiella littoralis U1_48CDSP-littoralis_Contig695 79692..80390 -
1680791441.3802476-CDS-P-littoralis_Contig695:80465..809471680791441.3802476-CDS-P-littoralis_Contig695:80465..80947Pylaiella littoralis U1_48CDSP-littoralis_Contig695 80466..80947 -
1680791441.3925714-CDS-P-littoralis_Contig695:81835..819861680791441.3925714-CDS-P-littoralis_Contig695:81835..81986Pylaiella littoralis U1_48CDSP-littoralis_Contig695 81836..81986 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig695.25.1

>prot_P-littoralis_Contig695.25.1 ID=prot_P-littoralis_Contig695.25.1|Name=mRNA_P-littoralis_Contig695.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1409bp
GAGEGGGWAGAGQVGVRGGGIRPRPSSARDPADSHLSLLARKAAANGNEG
STSKVASTPAAATPSAGGTTRAEMAVAAVATSSTTTTMARSAANTTPKSS
RPFASKPLQQRQRGVGQPLRAYPAPPFTDARSTNDVGQDRSVATSAAGTT
TTITIGRATNGSGNGIGGSGGSPKPCAPQSLSLSTGASAKFIASGAPSPQ
TRKQNTSSFSSGSPGTNGHSPGNQPLSRNLSRSTDTSTAGSPRASGASSP
SALVHDEGGLKFGNGGGSGNSHGGGVAPPHGGQTAIGGSGAGDRGGNGNG
NGNGNGKRNCSVDMAGDARQYNQGLTRPPKGRSMSGGNASAAGSNSNGTV
SAAGGAAKTPHLDQDAATVAVDREARSSVERGDIPATEDNEEEGVLLPGP
EGGVEVREFGGSFLVVRRSEEEKRRSPERLNLHRRRLKSCPIIQGDVSLR
LLNFQNNLISKITNLANLPNLIFIDLYNNLIDTLEGPLSAVTALRVIMAG
KNKIDKISNLGSLRRLDVLDLHSNSIRDMEGLNNLQDLRVLNLAGNRIRV
VDNVSCLAALTELNLRRNAIEKVTDLDALPRLQRLFLSNNRINSFQECSC
IFSVRSLLELGLDGNPVASQSAHGSSYRRYILHHLPSLRHLDRKKLTEHD
QQLSKQEREQEYDGRRKSSTALANTRVRENGGGEGSSSSSSERPSTTSGA
TGNNFKNINRSSNSNDLPVLLNSKNSNSNSNNQNNKNPAPTSSKVANQEQ
QQQQQQQQHGGREGGREGKAKKRSTAPPPELTTKYHSSLLQPPGGGATGT
ETGERVNSGSRADLRTAARGGSGGMSRAAEAREAVATKRAKVDREERERT
ALRERRQAIEAARECWERRGRGSEGSNRANCTRRRSTARDIPCNAKDVNN
NNNNNKNNAHAKPSSPPSPSPSPSSLLSPAATRHTPNEIPFSAVSGGEGP
PPRSPRSSAHLSRQPAPSPGNPGGGNRAREGRGVRDTAGGGGGTARGGSS
GRGVGYFELEQRLSVDEARAGSDASSLSSGGRAPGITLKVYGDVWRWLVD
GKVCALREQVVEARFSLVHVTSVARKAVAIAQTFPNLSCLQLLDNDIRSL
KQLERLQPILRGLATLHLGKNSLVKNASETALRAWVKAQGPLLTIPPPAV
TGWFGDGRNYFAGGASPPTTARHTAAAAATAAPDPMTTTVKSPPPLPPEP
STSSNNEKGVVLLAPSCGGGGGRGCTSGAATLGVGASDASGEGEGPGCRS
TAAVTTSPTSSAALGFETPSSGLFERACATTTRIIDQSSDTAGASAVGRS
VQSRGADSTLTAADAAFERLAEARSRAASSSWGAIALPGLQAAEVNVSRI
SGGGRGTEAARDSGGSAWAASARGAKLACNTVVRRVCEAHRMDGNFSQAW
ENALENIVE
back to top

mRNA from alignment at P-littoralis_Contig695:70645..81986-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig695.25.1 ID=mRNA_P-littoralis_Contig695.25.1|Name=mRNA_P-littoralis_Contig695.25.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11342bp|location=Sequence derived from alignment at P-littoralis_Contig695:70645..81986- (Pylaiella littoralis U1_48)
GGCGCCGGCGAGGGTGGTGGTTGGGCGGGGGCGGGGCAAGTTGGTGTACG
CGGGGGGGGGATACGACCTCGCCCATCCAGCGCACGGGACCCCGCCGATT
CTCACTTGTCGCTTCTAGCCAGAAAAGCGGCGGCAAACGGGAATGAGGGG
AGTGGACGGGGCGTCGGCTACGCGATGCAGGTTGGCGGTATGAAATACCA
CAATGCCCTTCTGTTCGCCACTCGTGCCCCGTGTGTGTCAATGAATGCGC
GATTCGCGCGCTCTACCCCCTTAAGCCTCATCGAAGTTGTTGTTGATCGT
CAACCGTTGAAACCTCAGGACAACCGTTCCTTGGGGTTGGCTGCTTTTGT
TCCTCTAAGCAATGTTTGTGAAATCGGGTATGATATTGCTATTTCGCGTT
CTATCTGCCAAAACGACTACTACTATAGCTTGGCTTTTGGCTGCTTGTGT
ATTACTTCTGCGCAACGTTTATCGATCACTTCCGCACCGTCTTCTAAAGC
CGTCGCTCTAACCTTTCTTTCAAATGTTTTTAGGCCTGCCCACGAGGGCA
CCCCGGCAGCTCACTGCAGGTGGCGTAGGTTTGTCCTCTAAGCACTTGGT
GTGTATCAGCCCGTTCTCCTTTCAAACTCACTGCGGGACCTAGCGGCAAC
TTCGATTCATTGAGTTATTTTCGTATTGGTTATTCTTTGTGCCCTGTGAC
CCCTCTTCAAGCATCATTTTTATGCCCCGCCATTCAGGGCTTCTACTTCT
TGCGGCCTTCCGGACGCCGAAATGTCTCGTTTTTTCCCCTTTTTTTTGCG
TGCTGGAAAACCATAACAGGCGTCTTTCTTCCCACTTTTATCGGTGGAAG
ACGATCCTACGCTAAACCAACAAGTATCCCCGAACCATCACCATCACAAC
AAAAGAAGAGGCAACAACAACAGCGACAACACCAACACCACGACCAGCAG
CAACAACAACAACAACGATAACAGCAACAGCAGCAGCAGCGACGACAGCA
ACAGAAACAACGACAGCGGTAGAGGCAACCACGTTTCAGGCACAAGCAAA
GTGGCATCAACGCCAGCTGCAGCTACGCCCTCTGCAGGAGGTACAACAAG
AGCGGAAATGGCAGTTGCAGCTGTTGCGACATCTTCCACCACGACAACGA
TGGCCCGAAGCGCAGCCAATACGACCCCGAAATCGTCACGTCCGTTCGCC
TCAAAGCCGCTTCAACAGCGCCAGCGGGGTGTTGGCCAGCCGCTGCGGGC
GTATCCCGCCCCGCCCTTCACTGATGCGAGAAGCACCAACGACGTTGGCC
AAGACAGGTCTGTGGCCACTTCAGCAGCCGGAACGACGACAACAATAACC
ATCGGCCGGGCCACAAACGGTAGCGGCAACGGTATTGGAGGAAGCGGAGG
GAGTCCGAAACCGTGCGCACCGCAGTCCCTGTCGCTGTCCACGGGAGCCA
GCGCAAAGTTCATCGCTAGCGGAGCCCCATCCCCCCAAACCAGAAAACAA
AACACCTCTAGCTTCTCCTCGGTTTGGGGCTTGGGGGAGGTCACCACGGT
GGCGGCAGCAGCTACACCAGTGGTCGCTGTGCGCCAGCTGGGGCAGGGAA
GCCCCGGCACCAACGGCCACAGCCCCGGCAATCAACCATTGTCACGGAAC
CTGTCGCGGTCCACCGACACGAGCACTGCTGGCAGTCCTAGAGCGAGCGG
CGCTAGTTCCCCTTCCGCTTTGGTGCACGACGAGGGCGGCCTGAAGTTCG
GCAACGGCGGGGGTAGCGGCAACAGTCACGGCGGTGGGGTTGCTCCTCCC
CACGGGGGGCAAACCGCTATCGGTGGCAGTGGGGCCGGGGACCGGGGCGG
CAACGGCAACGGCAACGGTAACGGCAACGGCAAACGCAATTGCAGCGTTG
ACATGGCGGGCGACGCGAGACAGTACAACCAGGGCTTGACAAGGCCACCG
AAGGGCCGCAGCATGAGCGGAGGCAATGCCAGCGCTGCTGGGAGCAATAG
CAACGGCACCGTCTCAGCGGCTGGTGGGGCAGCGAAAACTCCACACCTAG
ACCAGGACGCCGCCACCGTCGCGGTCGATAGAGAGGCAAGGAGTTCGGTG
GAGAGAGGAGATATTCCTGCCACTGAGGACAACGAAGAAGAGGGTGTGCT
GCTACCGGGTCCCGAGGGGGGGGTGGAGGTGCGGGAGTTCGGTGGAAGCT
TTTTGGTAGTGCGAAGAAGCGAGGAGGAGAAGCGAAGATCGCCGGAGAGG
CTGAACTTGCACCGACGGCGGTTAAAATCGTGCCCTATCATTCAGGTGAG
CTACGCACCCTGAAATCCTCCTTTGCCCTAAAGCTTGCGTTCCCTATCGT
TTTTTAAACGGTGTTTGCTTTTCCGAGCTTAGACTGCCGCGTTGTTGCGT
CGAGCAAGGTTTGGGCGGTTGCTCTCAAGGATACCGTCGTTTCTGCGCTG
TTCGATCTGTCCTCCGCGATACAAAAACATGCGGGTCTCTAGCCGTGCCT
TTTCGCAGGCTTTGCTAGATTAAACCTAAGAGGACACCTGGTACATCGCA
CCGTCTTTGGGTAGCGAGGTCACAATTTCCTTCCCCTGCCCCTTCCATAC
ACCGCGCGCTGCCTTCCGACGTGCGGCACCGTACAACGTCACCACGCGTA
TCCAACAATCGGGCCGGGCCCACAGGGAGACGTCAGCTTGAGGCTCCTCA
ACTTCCAGAACAACCTCATCAGCAAGATCACGAACCTCGCCAACCTGCCG
AACCTAATATTCATAGATCTGTACAATAACTTGATCGACACCCTGGAGGG
GCCCCTGTCAGCGGTGACGGCCTTGCGCGTCATAATGGCAGGGAAAAACA
AGATCGACAAGGTGTGCATGTAGTGTTTTTCTATTGTTTATTGTAGTGTC
GGCGGTGGCGGTGGCGGTGGTGGTGGCGGTGATGGTGGCGGTGGTGGTGG
CGTTCTTCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTGTTGTTGGG
ATTGCTGTTTCTCGCATCAGCTCGTCTCCAGAACCGGGCCCGTGATCGCA
AATAAATCAACCAGCAGGAACAAAGAACGTCCCGGACGAATGCAACGCAC
GTTGTGCTCGTGACTATGGCTGCACAGGGGTAACGATTCGCTTTGCACCG
TCTCTCAGCCCAAGTGCAACCCTAACCCGCGGTTTCCGTTGAACCGCACA
AACCCGGGTGCCTTCGGCGCAAGTTTCATTACTGGTCGGAAAGCACCAGG
TCAGAGGTGAGTGCATTCGTGGTCGGCAGCGGAACCATGAGTGCGCGACA
TAACTATGCCAGCGAACGCACCGCGGTACGCGCGAAGTTCCACGCCCGGT
ACCTCGACAATGGGAATCATGCCGAGAGTAGAAAAATATGCCGTTGGACA
CATCTCACCGAGGTCGCTCCGATAACTGATCGTTCAACCAAAGCATCCCC
GCGGGGTCGAGGTACGGTGAGTCAAAGTTGGCGCGCACCCCGGTGCGGTC
GCTCACACGATCATGGGAATTGTCCGAATAAAGTTTTTTCTGAGGACAAA
AGTGTGCAGGTAGGGCCACGGGTACCGAAAGCGTTCTCGGCTTTGATTAT
ACCTCCTACGTAGCTCCGTGTGGATCTTGCTAGTTGTCAGTTCGTACAGG
CTTTGCATGGGCTAAGATTTAGTAACCCAGCCACCCAATAGCTTGCTCCT
GCATGGCCTGCAATGATAGGAGATAACGTGGATCCAGCCAGGCTTCGCTC
AATTACATGTCCCGACTTTTACAACATTTGCAACGTTGTCGGTTTTTGTT
CGAGCTGCGTCGGAACTTGTCCGTCATCTGCGCTAGCGTACGGAATCCCA
TGATACCCTGTGACTCTCAAGTCCCACCTAAAAAAATGGTTAGGATGCCG
CGGGAAAAACAAGGTGATGGTGAACACAGGGGCTGGCCCTTTGTATTCAG
GAAGACAAAAACCATTGCCACAGGAAAACACTCAACAACAAAAGGGCAAC
AGCAGCAACAACTATAAGCCACTTTGCTACCATGAAAAAATCAGAAAATA
TCGATAGCAACACAAAATATTACCTACGACGATAAACATCTTCACGACGC
GATCGCGTGGATGGCAGATATCAAACCTCGGTTCCCTTCGAAGGTTGGAT
GTTCTCGACCTGCACTCCAACTCTATTCGAGATATGGAGGGACTAAACAA
CCTGCAGGACTTGAGGGTGCTAAATCTTGCCGGAAACCGGATCAGGTGAG
AGGAACAGATTGGGAGCGTTGCCGTTGTCGCGGTCGTTGGTCTTGTGGTT
GTTCTTCCTCTTCGTCGCCCTTTTGTAGTTGGTTGCTGCTGATGATACTG
CTGCGGTTGCCGGTGGTGCTGTTTGTTTGCGGCTTCTTGATGTGGAGACT
CCTCAACCGAGAAGGTTTGGCGGTTCGGTTCCTCGATATGTTTTGTGACA
GTGCCAGTGATCTCTGAATCCCCTCCGAATATCTGCCTGCGCATCTTGTC
ACCAGGGTTGTAGACAACGTGAGCTGCCTAGCGGCCCTAACGGAGCTCAA
TCTGCGGAGGAATGCCATCGAAAAGGTGGGTTTTCTGTCAGCAACTCTTA
GCGCGAGGCCTCTGATTTGCACTGCAGCTACCTCCCACCTCTTATTTGCC
ACGAAACACGTAAGGGTCGTCCCTAGATATTCCTTTGAATATATCTGTCA
TAAAGCAGTGCTTGGAGTAAACATTTTTTATGTGCGAGGCATCCCGCCCT
GACTACTATTGCCAGACGGCTTGGGACCATATTTGAGCTGAAGATGGATG
TGGGGCTTGACATCTTTCATCTTCACTGGCAACTGCGGCGTGACGTATGA
AAGACTGTGAGGATGCTCAGTGGGTCGCCCCAAGCCCTCTGAGCGCGTGG
TTTGTTCCCATTGCCCCTAAACGGCGTCGATTTTGGCTTTAACTACCGAG
CCAACCGGCACAAGGCTTACGCCAGACGTCCGGCATGGTTTACAACTGGA
ACAAGTCAAACAAATGCCAGGAACTTGGTTGTGTCGTGAGTTTCACGCTG
ACGGAACTGAAAAGAACCCAGTATCCGAACGTTTTTTCCGTACATATAAC
ATTGGTAGAGTAGGCAGCACTCCCCCCCTTGTCGTCGTCCCGTCGTACAC
CGTGGCAAGAGGCACATTTCTGAAGTTAGGAGACATAGACCCGCCCAAAA
TCAAAGCGCTTCTTAGACTGTGTCCTGCCGCCACATAAACGCATGAATAC
TTAGTACGAGGATGCCCTCCGGTGCATTTATCAACCATGCGCCCGTAGGT
TACCGACCTCGATGCCCTTCCTAGACTGCAGCGACTTTTTCTTAGCAACA
ACAGGATAAACAGCTTTCAAGAGTGTTCGTGTATCTTCTCCGTGAGGTGA
GTGTCTCCGGCTCGGGCGTAGAGTTAGGTTCCGGGCTAGGGATAGGTGGA
CTCTGAACCTAGCCCTAACCTTACTCAGTCAGGTGCCGGGAGAGCCGCCA
TCGCTGAAGCGCCGGGTTTCAATCTACCCCGATACTTTGATTCCTCGGCA
AAGCTAAGACGGGCACGGGCTCGCTTCTCCAACAGCATGAATTCGTTCTA
ACCACAGCTATGCGTGGGTTTAGCGTCGAAAATATTTGCCAAACATTTTC
CTTTAAATTTCAGTTTTTACATTATGCTGTGGGCTCGTCGTTGAACTTTA
GTCGTTGTTCGCCTTGGAAGATGTATTCTTTTGGAGGAAAACGGTGCGCA
ACTCGCGTCGTGTTTTATGTTTGCTGTTGTTGGTGGTGTTGGAGTATACT
GCGATTTGCGACGGCGAGAAACTTACGCGACCGAGGACACCAGGTTTCGA
ACGACGCCGCAAATAGTTTTGATTGCAAGATCCATAGAGAACCTAGACGA
CGGGCACGCAGACAGACTCGCCCATCTTTATCCTTCAAAACTTTCGATGC
GCTGGTCCCCTGCCAAGGTATTGGTGCGTTGATGGAACGTTAGTCTGCCT
TATATTTGGCCAAGACGCCCAAACTCCGGGACTGCCCATGCCCCCGTCGA
CAAACCCTCAAGGTCTTTGCTAGAGCTGGGCCTGGACGGTAACCCAGTCG
CCAGCCAAAGCGCCCACGGTTCTAGCTACCGCCGCTACATTCTCCATCAC
CTGCCGAGCCTCCGCCACCTCGACCGCAAGAAGCTCACGGAACACGACCA
GCAGCTCTCAAAGCAGGAGCGGGAGCAAGAGTACGACGGCAGGCGCAAGT
CATCCACAGCGCTCGCCAATACCAGGGTCCGAGAGAATGGCGGAGGAGAA
GGCAGCAGCAGCAGCAGCTCCGAACGACCGTCTACGACGAGCGGGGCAAC
TGGAAACAATTTCAAGAACATCAACCGCAGCAGCAACAGCAACGACCTTC
CGGTCCTGCTCAACAGCAAAAATAGCAACAGCAACAGCAACAATCAAAAC
AACAAGAACCCGGCTCCGACGTCGTCAAAAGTAGCCAATCAGGAACAGCA
ACAACAGCAGCAGCAGCAGCAGCATGTCCGTCGGGCACCAGCCGACCGCA
GTGGGAACCAGGGCGACAATTCCCCCAGGCGCCATCAACGTAGCGCGGGG
GCTGTGTGGGGTGCGGAACACCCTCCCACCAGAGGAGATAGGGCACAGGT
GCAGAATAATACCTCAGGATTTTATGTTGTGTTTCGCGTGCGCACCACAA
CTAAAATTCCTGGGTGACCCAGGCTGAGCAATGCCTTTTTCGTTTCAGAG
CGGCTGTACCTAAGTGTTGTTGGGTGTCTTGAACAACAAACAATACTACT
GGGTAACCCAGTTTGAGCAATGTTTTCGTGTCAGAGTGGCTGCACTTATG
AGTTTCTTACTGTTCTGTACGACAATGAATATTCGTATTAGATCGCCTGA
ATGCAAGCAAGCAAATTAGTTTTGTCCATGTTTCTTGTAGATGACACCTG
GTTGAGTATTGCTTGCACGATGGTACGGCGACACCTGAAGGCGGCCCCTC
GAGGGCCCCTTCGCAAAGACGAGGCTATTTCGAACATATACCCCCCGTTC
GGCCACGTATACTTGTACCGTATAAAGCCAAACAAAAAAAATCAGTCACC
AGCCCCCACCAACTCTGAATGAAAGCTGATCATCGTATGACACATACTTT
GAAAGCGGCTATGCTGTTAGTAAAAGCAGATTCGGCTTTGCCGACGAGGG
TAGGGACCGCGGATCCCTGCTCGCGAGAAAAAATCTCACGCATGTACCGC
AGAAGGAAGGTGGGGGTAACTCCTCCTGTGTTGACCTTCCTCCTGTGTTG
ACCTTCCTCCTGTGTGACCCCGTCGATGGGTCTAGCCTGTAGTTTGAACC
GCAGGGTGCAGACTAGTGTGCCAGAGAATATGGGATGACAACACATGCAT
CCCGTCGAAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGC
AAAGCCAAGAAACGATCGACGGCGCCGCCTCCTGAACTAACGACAAAATA
CCACTCGTCTTTGCTTCAGCCACCTGGAGGAGGGGCAACGGGAACAGAGA
CGGGCGAGCGCGTCAACAGCGGGAGCAGGGCTGACTTGCGAACGGCGGCG
CGGGGCGGCAGCGGCGGGATGAGTCGAGCGGCCGAAGCGAGGGAAGCTGT
GGCGACGAAGCGGGCAAAGGTGGACAGAGAGGAGCGAGAACGAACGGCGT
TGAGGGAGCGGAGGCAGGCCATCGAAGCCGCCAGGTGAAGGCAGGTTCTT
CTGGAGGAAAACATTCTCAGGAACGTCTCGGGAACCGTCCTTGGGTGTCG
ATCGTGGAATCTAGTCCTAGGAACTGTTCGTTTGGTAGTTTGCTAAGTAT
CAATGCCTTCTGTTCGATTATTCGCTGCATAACCCGAGACTACTGTTGTA
ATAATCACCAGATGTTGAGAACTGTATTCGCCCTTATTCCACACTTGCTC
TCCTTTTCACCCTATTTTCATGGGCGAGTATTCCGAAAGCGTTGCCTCTT
CATCGCTATCATCCTCATGAATATTTTCCCGCAAAATCAATCCGCCCCAA
TCCGTACACAGCGCATCCTCATTGAACAAGTAGATCGAATTCCTTCCTCA
CACAAAGTCCAATGTTTTACTCAATGATCTGTCCACCTAAAGCAGTGAGC
CTTGTGTCACAAGTGGTAGCAAACACGCCTTTGGGCCGAGCATCTAACGA
AATGTTCCTTGCTCCGCCGGAATAGAGAGGGTACACGTGCCAAACCGACG
CGCTTCTCTCTTGTAAATCCTGGGCTGCATGTATATTTTCGTCGCCACGG
TCGCCGAAACAGGCCATGTTTCCCCTGTTGAGATGTCGAAGGAGGTTAGC
GGTGTGGGCTTGTCGACATGCCTGTATTGCACGCGCATAGCCGCGGTCGC
GTTCTCTTGGAATTTCACTTGCCTCCTTCCCTAAGGCCGATGACGTTCGC
TGCGCAAGGAAGCACTGTACCCACGTATCTGCGCACAGCAGTGTTGTCGG
CGATATGATACACCGCCTTGTGGAGTTTCAGCAGTACTGAAGTTGCCGTC
ACGTGGTACATCCCTAGAAAAGTGTACTGCGGGGCAAGACCCCTGCGTGG
CAAGATCTCGACGACGTCCATCGGGAAACCGATTCATTCAACGGAAGACG
CTGGCTTACTCTTAATGACCTTTGAACACAAGAGTGATTCCCTTATTTCT
CCATGTGATACCAATAGAATACCGAGGAAAATTCTCCCTTGAGCGCGACG
TTACCCAGATTTGAGGCAACAGGGTAAGATGGTTTAAGGACAGGTGCTCC
CCCGATTATGCCATTCATGGCCAAAATATCCGTTTGACCTTCACGCCATC
GCTCATCAGTTTACGATAGTATTCCCACCCGAACCGGCTTTTTTCTTGGT
CCATCATGTTGCTGGTTTTCTCAGGGAATGCTGGGAAAGGCGTGGGCGCG
GCTCAGAAGGCAGCAACAGGGCGAACTGCACAAGGCGTCGCAGTACAGCC
CGCGACATCCCGTGCAACGCCAAAGATGTCAACAACAACAACAACAACAA
CAAAAACAACGCTCACGCGAAGCCATCCTCGCCGCCGTCACCATCACCGT
CACCATCGTCGTTACTTTCGCCCGCTGCAACAAGACATACACCCAACGAA
ATCCCCTTCTCGGCTGTTTCCGGGGGGGAGGGACCCCCCCCTCGAAGCCC
CCGCTCCTCTGCGCACCTGAGCAGGCAACCGGCGCCTTCTCCCGGAAATC
CGGGTGGTGGGAATAGGGCTCGAGAGGGGCGCGGGGTGCGAGACACCGCC
GGAGGTGGGGGGGGCACCGCCCGTGGGGGCTCTTCGGGTAGGGGGGTGGG
GTACTTCGAGCTGGAGCAGCGCCTGAGCGTGGATGAAGCAAGAGCGGGGA
GTGATGCATCATCATTGTCATCGGGGGGGCGGGCCCCCGGGATCACGCTC
AAGGTTTACGGGGACGTCTGGCGGTGGCTAGTGGACGGGAAGGTATGCGC
CCTCAGGGAGCAGGTGGTCGAGGCTCGGTTCTCGCTCGTGCATGTCACCA
GCGTGGCCAGGAAAGCAGTGGCCATCGCGCAGGTATGTTCGTGGGAAGTA
TCGCGCTTCAGGGCACAAAAAATGTTATTTTTTGGAGACGCAGTCACATG
GATGATAACGGGTTGATATGGCGACAGCGGTCGGGCGGCATGGGCCAGTC
GTTCTTTTCGTCTTTCATTCGCTACCTGAAAGGAAATACTCAGAGCTTCT
TGGGTTACTTCTATTTGTATACACCATCGACACATCCACAATTTTTTTAT
CAATGGTGGATTCTCCGTCTGTGCTGAGAACCTTGCCGCTCTCACCGTTC
CGCTTACATCTGATCGAACCGCGATCCTAACGACGCCCCTCCCTCCCCCA
CGCAGACGTTTCCCAACCTCTCATGCCTTCAGCTGCTGGACAACGACATC
CGAAGCTTAAAACAGCTCGAGCGTCTTCAGCCCATCCTGCGTGGTCTTGC
AACTCTTCACCTCGGGAAGAATTCCCTCGTAAAAAACGCCTCCGAAACAG
CTCTCCGAGCCTGGGTTAAGGCTCAAGGCCCCCTGCTGACGATCCCACCT
CCGGCAGTGACCGGCTGGTTCGGAGACGGAAGGAACTACTTTGCCGGCGG
GGCAAGCCCCCCAACTACCGCTAGACATACCGCGGCGGCAGCAGCGACAG
CCGCCCCCGACCCGATGACGACGACCGTAAAAAGCCCTCCACCGCTCCCT
CCAGAACCTTCTACAAGCAGCAACAACGAGAAGGGCGTGGTGCTGCTGGC
TCCAAGCTGTGGCGGCGGAGGAGGGAGGGGTTGCACAAGCGGTGCAGCAA
CCCTTGGGGTAGGGGCTAGTGATGCTTCTGGGGAAGGCGAGGGGCCTGGC
TGCAGAAGCACCGCAGCAGTAACCACCTCGCCAACATCGTCAGCAGCCCT
GGGCTTTGAAACCCCTTCCTCGGGTTTGTTCGAGAGGGCATGTGCTACCA
CCACCCGAATTATCGACCAATCATCAGACACCGCAGGCGCTAGTGCGGTC
GGTCGCTCCGTCCAATCGAGAGGGGCGGACTCAACATTGACGGCGGCAGA
CGCCGCTTTCGAGCGGCTTGCAGAGGCTCGAAGCCGTGCGGCTTCTTCGT
CGTGGGGGGCCATCGCGTTACCAGGATTGCAGGCTGCTGAGGTCAATGTC
AGTAGAATCAGCGGTGGCGGTCGAGGGACGGAGGCGGCGCGGGATAGCGG
CGGCAGCGCATGGGCAGCTTCGGCGCGAGGGGCGAAGCTAGCCTGCAACA
CAGTGGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
AATGGCGCGACCAGGGTATTCCGTTGCGCTATCGATATAAAAATGAAAAT
GTTCAATTTTAGATCGGCAAGCAAGCTGATGATCATCTTCGCCATTATCA
GTCAAGTGAGTTGTACTTCGACGTCGGCGCGCCCCCTCTCGAAGTTGGTG
CCAATAACATCTCTTTCGCCTCGTGTCACGCCCGGCACGAGAGTTCGCTT
GGAGTCAACCTCCCCGCTTCGGTTTACCCAAAATGTATGTGAATTTGTAT
ATCTAGCGAAGGCGTTTCTTCACCCTTGGGGGGTTGTGCTCAGCATGCGT
GTGGTGACCGCCGGGCTTTGCATTTGCAGTGGGGTTGAACGACGCGCCAT
GTGAATGACACAAGGGGATGTCCTCCCGTTGCCCGCTGTTCGCTTGTACC
GCTCCTCTCAGGTACGAAGAGTATGCGAGGCTCATAGGATGGACGGGAAT
TTCAGCCAAGCCTGGGAGAACGCATTAGAGAATATTGTAGAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig695:70645..81986-

>mRNA_P-littoralis_Contig695.25.1 ID=mRNA_P-littoralis_Contig695.25.1|Name=mRNA_P-littoralis_Contig695.25.1|organism=Pylaiella littoralis U1_48|type=CDS|length=4227bp|location=Sequence derived from alignment at P-littoralis_Contig695:70645..81986- (Pylaiella littoralis U1_48)
GGCGCCGGCGAGGGTGGTGGTTGGGCGGGGGCGGGGCAAGTTGGTGTACG
CGGGGGGGGGATACGACCTCGCCCATCCAGCGCACGGGACCCCGCCGATT
CTCACTTGTCGCTTCTAGCCAGAAAAGCGGCGGCAAACGGGAATGAGGGG
AGCACAAGCAAAGTGGCATCAACGCCAGCTGCAGCTACGCCCTCTGCAGG
AGGTACAACAAGAGCGGAAATGGCAGTTGCAGCTGTTGCGACATCTTCCA
CCACGACAACGATGGCCCGAAGCGCAGCCAATACGACCCCGAAATCGTCA
CGTCCGTTCGCCTCAAAGCCGCTTCAACAGCGCCAGCGGGGTGTTGGCCA
GCCGCTGCGGGCGTATCCCGCCCCGCCCTTCACTGATGCGAGAAGCACCA
ACGACGTTGGCCAAGACAGGTCTGTGGCCACTTCAGCAGCCGGAACGACG
ACAACAATAACCATCGGCCGGGCCACAAACGGTAGCGGCAACGGTATTGG
AGGAAGCGGAGGGAGTCCGAAACCGTGCGCACCGCAGTCCCTGTCGCTGT
CCACGGGAGCCAGCGCAAAGTTCATCGCTAGCGGAGCCCCATCCCCCCAA
ACCAGAAAACAAAACACCTCTAGCTTCTCCTCGGGAAGCCCCGGCACCAA
CGGCCACAGCCCCGGCAATCAACCATTGTCACGGAACCTGTCGCGGTCCA
CCGACACGAGCACTGCTGGCAGTCCTAGAGCGAGCGGCGCTAGTTCCCCT
TCCGCTTTGGTGCACGACGAGGGCGGCCTGAAGTTCGGCAACGGCGGGGG
TAGCGGCAACAGTCACGGCGGTGGGGTTGCTCCTCCCCACGGGGGGCAAA
CCGCTATCGGTGGCAGTGGGGCCGGGGACCGGGGCGGCAACGGCAACGGC
AACGGTAACGGCAACGGCAAACGCAATTGCAGCGTTGACATGGCGGGCGA
CGCGAGACAGTACAACCAGGGCTTGACAAGGCCACCGAAGGGCCGCAGCA
TGAGCGGAGGCAATGCCAGCGCTGCTGGGAGCAATAGCAACGGCACCGTC
TCAGCGGCTGGTGGGGCAGCGAAAACTCCACACCTAGACCAGGACGCCGC
CACCGTCGCGGTCGATAGAGAGGCAAGGAGTTCGGTGGAGAGAGGAGATA
TTCCTGCCACTGAGGACAACGAAGAAGAGGGTGTGCTGCTACCGGGTCCC
GAGGGGGGGGTGGAGGTGCGGGAGTTCGGTGGAAGCTTTTTGGTAGTGCG
AAGAAGCGAGGAGGAGAAGCGAAGATCGCCGGAGAGGCTGAACTTGCACC
GACGGCGGTTAAAATCGTGCCCTATCATTCAGGGAGACGTCAGCTTGAGG
CTCCTCAACTTCCAGAACAACCTCATCAGCAAGATCACGAACCTCGCCAA
CCTGCCGAACCTAATATTCATAGATCTGTACAATAACTTGATCGACACCC
TGGAGGGGCCCCTGTCAGCGGTGACGGCCTTGCGCGTCATAATGGCAGGG
AAAAACAAGATCGACAAGATATCAAACCTCGGTTCCCTTCGAAGGTTGGA
TGTTCTCGACCTGCACTCCAACTCTATTCGAGATATGGAGGGACTAAACA
ACCTGCAGGACTTGAGGGTGCTAAATCTTGCCGGAAACCGGATCAGGGTT
GTAGACAACGTGAGCTGCCTAGCGGCCCTAACGGAGCTCAATCTGCGGAG
GAATGCCATCGAAAAGGTTACCGACCTCGATGCCCTTCCTAGACTGCAGC
GACTTTTTCTTAGCAACAACAGGATAAACAGCTTTCAAGAGTGTTCGTGT
ATCTTCTCCGTGAGGTCTTTGCTAGAGCTGGGCCTGGACGGTAACCCAGT
CGCCAGCCAAAGCGCCCACGGTTCTAGCTACCGCCGCTACATTCTCCATC
ACCTGCCGAGCCTCCGCCACCTCGACCGCAAGAAGCTCACGGAACACGAC
CAGCAGCTCTCAAAGCAGGAGCGGGAGCAAGAGTACGACGGCAGGCGCAA
GTCATCCACAGCGCTCGCCAATACCAGGGTCCGAGAGAATGGCGGAGGAG
AAGGCAGCAGCAGCAGCAGCTCCGAACGACCGTCTACGACGAGCGGGGCA
ACTGGAAACAATTTCAAGAACATCAACCGCAGCAGCAACAGCAACGACCT
TCCGGTCCTGCTCAACAGCAAAAATAGCAACAGCAACAGCAACAATCAAA
ACAACAAGAACCCGGCTCCGACGTCGTCAAAAGTAGCCAATCAGGAACAG
CAACAACAGCAGCAGCAGCAGCAGCATGGAGGGAGGGAGGGAGGGAGGGA
AGGCAAAGCCAAGAAACGATCGACGGCGCCGCCTCCTGAACTAACGACAA
AATACCACTCGTCTTTGCTTCAGCCACCTGGAGGAGGGGCAACGGGAACA
GAGACGGGCGAGCGCGTCAACAGCGGGAGCAGGGCTGACTTGCGAACGGC
GGCGCGGGGCGGCAGCGGCGGGATGAGTCGAGCGGCCGAAGCGAGGGAAG
CTGTGGCGACGAAGCGGGCAAAGGTGGACAGAGAGGAGCGAGAACGAACG
GCGTTGAGGGAGCGGAGGCAGGCCATCGAAGCCGCCAGGGAATGCTGGGA
AAGGCGTGGGCGCGGCTCAGAAGGCAGCAACAGGGCGAACTGCACAAGGC
GTCGCAGTACAGCCCGCGACATCCCGTGCAACGCCAAAGATGTCAACAAC
AACAACAACAACAACAAAAACAACGCTCACGCGAAGCCATCCTCGCCGCC
GTCACCATCACCGTCACCATCGTCGTTACTTTCGCCCGCTGCAACAAGAC
ATACACCCAACGAAATCCCCTTCTCGGCTGTTTCCGGGGGGGAGGGACCC
CCCCCTCGAAGCCCCCGCTCCTCTGCGCACCTGAGCAGGCAACCGGCGCC
TTCTCCCGGAAATCCGGGTGGTGGGAATAGGGCTCGAGAGGGGCGCGGGG
TGCGAGACACCGCCGGAGGTGGGGGGGGCACCGCCCGTGGGGGCTCTTCG
GGTAGGGGGGTGGGGTACTTCGAGCTGGAGCAGCGCCTGAGCGTGGATGA
AGCAAGAGCGGGGAGTGATGCATCATCATTGTCATCGGGGGGGCGGGCCC
CCGGGATCACGCTCAAGGTTTACGGGGACGTCTGGCGGTGGCTAGTGGAC
GGGAAGGTATGCGCCCTCAGGGAGCAGGTGGTCGAGGCTCGGTTCTCGCT
CGTGCATGTCACCAGCGTGGCCAGGAAAGCAGTGGCCATCGCGCAGACGT
TTCCCAACCTCTCATGCCTTCAGCTGCTGGACAACGACATCCGAAGCTTA
AAACAGCTCGAGCGTCTTCAGCCCATCCTGCGTGGTCTTGCAACTCTTCA
CCTCGGGAAGAATTCCCTCGTAAAAAACGCCTCCGAAACAGCTCTCCGAG
CCTGGGTTAAGGCTCAAGGCCCCCTGCTGACGATCCCACCTCCGGCAGTG
ACCGGCTGGTTCGGAGACGGAAGGAACTACTTTGCCGGCGGGGCAAGCCC
CCCAACTACCGCTAGACATACCGCGGCGGCAGCAGCGACAGCCGCCCCCG
ACCCGATGACGACGACCGTAAAAAGCCCTCCACCGCTCCCTCCAGAACCT
TCTACAAGCAGCAACAACGAGAAGGGCGTGGTGCTGCTGGCTCCAAGCTG
TGGCGGCGGAGGAGGGAGGGGTTGCACAAGCGGTGCAGCAACCCTTGGGG
TAGGGGCTAGTGATGCTTCTGGGGAAGGCGAGGGGCCTGGCTGCAGAAGC
ACCGCAGCAGTAACCACCTCGCCAACATCGTCAGCAGCCCTGGGCTTTGA
AACCCCTTCCTCGGGTTTGTTCGAGAGGGCATGTGCTACCACCACCCGAA
TTATCGACCAATCATCAGACACCGCAGGCGCTAGTGCGGTCGGTCGCTCC
GTCCAATCGAGAGGGGCGGACTCAACATTGACGGCGGCAGACGCCGCTTT
CGAGCGGCTTGCAGAGGCTCGAAGCCGTGCGGCTTCTTCGTCGTGGGGGG
CCATCGCGTTACCAGGATTGCAGGCTGCTGAGGTCAATGTCAGTAGAATC
AGCGGTGGCGGTCGAGGGACGGAGGCGGCGCGGGATAGCGGCGGCAGCGC
ATGGGCAGCTTCGGCGCGAGGGGCGAAGCTAGCCTGCAACACAGTGGTAC
GAAGAGTATGCGAGGCTCATAGGATGGACGGGAATTTCAGCCAAGCCTGG
GAGAACGCATTAGAGAATATTGTAGAG
back to top