mRNA_P-littoralis_Contig694.27.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig694.27.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE) HSP 1 Score: 397 bits (1020), Expect = 1.080e-124 Identity = 199/216 (92.13%), Postives = 204/216 (94.44%), Query Frame = 1
Query: 1 ANVKQRDLAEFHAARPLEKLGWARLEMQTNFQQTMTARRMHVCTVCSERWDTAEDGPGD----GGAVYSCPRCKKDKKSPKLFSADSNMDPGSVPVKLQDLTRTEEMLIARCCLIMRVPYLKGGQRGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQPRGLRT 636
ANVK+RDLAEFHAARPLEKLGWARLEMQTNFQQ MTARRMHVCTVCSERWDTAEDGPG GGAVYSCPRCKKDKKSPKLFSAD+ MDPGSVPV+LQ LT+TEEMLIARCC IMRV +LKGGQ GYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQ RGLRT
Sbjct: 64 ANVKRRDLAEFHAARPLEKLGWARLEMQTNFQQPMTARRMHVCTVCSERWDTAEDGPGXXXXXGGAVYSCPRCKKDKKSPKLFSADNTMDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQLRGLRT 279
BLAST of mRNA_P-littoralis_Contig694.27.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE) HSP 1 Score: 277 bits (709), Expect = 4.010e-87 Identity = 138/149 (92.62%), Postives = 143/149 (95.97%), Query Frame = 1
Query: 190 YSCPRCKKDKKSPKLFSADSNMDPGSVPVKLQDLTRTEEMLIARCCLIMRVPYLKGGQRGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQPRGLRT 636
YSCPRCKKDKKSPKLFSAD+ MDPGSVPV+LQ LT+TEEMLIARCC IMRV +LKGGQ GYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTA+SQLPVDGQ RGLRT
Sbjct: 24 YSCPRCKKDKKSPKLFSADNTMDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTAISQLPVDGQLRGLRT 172
BLAST of mRNA_P-littoralis_Contig694.27.1 vs. uniprot
Match: A0A6H5JBH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH9_9PHAE) HSP 1 Score: 236 bits (603), Expect = 9.300e-76 Identity = 120/128 (93.75%), Postives = 123/128 (96.09%), Query Frame = 1
Query: 253 MDPGSVPVKLQDLTRTEEMLIARCCLIMRVPYLKGGQRGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQPRGLRT 636
MDPGSVPV+LQ LT+TEEMLIARCC IMRV +LKGGQ GYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQ RGLRT
Sbjct: 1 MDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQLRGLRT 128
BLAST of mRNA_P-littoralis_Contig694.27.1 vs. uniprot
Match: A0A6S7G3B5_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7G3B5_PARCT) HSP 1 Score: 168 bits (425), Expect = 6.780e-48 Identity = 88/187 (47.06%), Postives = 119/187 (63.64%), Query Frame = 1
Query: 46 PLEKLGWARLEMQTNFQQTMTARRMHVCTVCSERWDTAEDGPGDGGAVYSCPRCKKDKKSPKLFSADSNMDPGSVPVKLQDLTRTEEMLIARCCLIMRVPYLKGGQRGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLP 606
PL +L + + EM + F CT+C E W T ++ G VY C RCK+DKKSPK FSA+++MDPG+VP +L+ LT+ EEMLI+R C IMRV GGQRGY GHV+N+ QDI + LP AD+P++I+RR G E H+D VRR +V A+ WL NNP+++DI +D + LP
Sbjct: 117 PLHELEFVQNEMHS-FHLDQEHLEHRQCTMCKEAWPTRQNL---GSEVYICYRCKRDKKSPKKFSAENDMDPGTVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAE-DTHRDFTVRRHKVLEAVLWLKTNNPFFKDIEIDRDVIQSLP 298
BLAST of mRNA_P-littoralis_Contig694.27.1 vs. uniprot
Match: A0A7D9LMQ1_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LMQ1_PARCT) HSP 1 Score: 169 bits (427), Expect = 4.780e-47 Identity = 90/196 (45.92%), Postives = 123/196 (62.76%), Query Frame = 1
Query: 46 PLEKLGWARLEMQTNFQQTMTARRMHVCTVCSERWDTAEDGPGDGGAVYSCPRCKKDKKSPKLFSADSNMDPGSVPVKLQDLTRTEEMLIARCCLIMRVPYLKGGQRGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQPRGLR 633
PL +L + + EM + F CT+C E W T ++ + VY C RCK+DKKSPK FSA+++MDPG VP +L+ LT+ EEMLI+R C IMRV GGQRGY GHV+N+ QDI + LP AD+P++I+RR G E H+D VRR +V A+ WL NNP++++I +D + LP +G P LR
Sbjct: 91 PLHELEFVQNEMNS-FHLDQEHLEHRQCTMCKEAWPTRQNLASE---VYICYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAE-DTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELR 281
BLAST of mRNA_P-littoralis_Contig694.27.1 vs. uniprot
Match: A0A6S7JXT5_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JXT5_PARCT) HSP 1 Score: 166 bits (421), Expect = 3.310e-46 Identity = 89/196 (45.41%), Postives = 122/196 (62.24%), Query Frame = 1
Query: 46 PLEKLGWARLEMQTNFQQTMTARRMHVCTVCSERWDTAEDGPGDGGAVYSCPRCKKDKKSPKLFSADSNMDPGSVPVKLQDLTRTEEMLIARCCLIMRVPYLKGGQRGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQPRGLR 633
PL +L + + EM + F C +C E W T ++ + VY C RCK+DKKSPK FSA+++MDPG VP +L+ LT+ EEMLI+R C IMRV GGQRGY GHV+N+ QDI + LP AD+P++I+RR G E H+D VRR +V A+ WL NNP++++I +D + LP +G P LR
Sbjct: 102 PLHELEFVQNEMHS-FHLDQEHLEHRQCIMCKEAWPTRQNLASE---VYICYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAE-DTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELR 292
BLAST of mRNA_P-littoralis_Contig694.27.1 vs. uniprot
Match: UPI00106C8F71 (uncharacterized protein LOC114545138 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C8F71) HSP 1 Score: 164 bits (414), Expect = 4.790e-46 Identity = 81/169 (47.93%), Postives = 113/169 (66.86%), Query Frame = 1
Query: 127 CTVCSERWDTAEDGPGDGGAVYSCPRCKKDKKSPKLFSADSNMDPGSVPVKLQDLTRTEEMLIARCCLIMRVPYLKGGQRGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQPRGLR 633
CT+C E W T ++ D + C RC++DKKSPK FS ++MDPG+VP +L+ LT+ EEMLI+R C IM+V GGQRGY GHV+N+ QDI + LP AD+P++I+RR+G + HKD VRR +V A+ WL NNP+++DI +D + +LP +G P LR
Sbjct: 16 CTICKETWPTKQNLAAD---PFVCYRCQRDKKSPKNFSTGNDMDPGTVPEQLRGLTQVEEMLISRVCPIMQVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPAQVADLPVMIVRRQGADET-HKDFTVRRHKVFEAISWLKTNNPFFKDIEIDRDIIQRLPENGVPEELR 180
BLAST of mRNA_P-littoralis_Contig694.27.1 vs. uniprot
Match: A0A7D9ETB4_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ETB4_PARCT) HSP 1 Score: 162 bits (411), Expect = 7.030e-46 Identity = 84/169 (49.70%), Postives = 110/169 (65.09%), Query Frame = 1
Query: 127 CTVCSERWDTAEDGPGDGGAVYSCPRCKKDKKSPKLFSADSNMDPGSVPVKLQDLTRTEEMLIARCCLIMRVPYLKGGQRGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQPRGLR 633
CT+C E W T ++ + VY C RCKKDKKSPK FSA+++MDPG VP +L LT+ EEMLI+R C IMRV GGQRGY G V+N+ QDI + LP AD+P++I+RR G E H+D VRR +V A+ WL NN +++DI +D + LP +G P LR
Sbjct: 93 CTMCKETWPTRQNLASE---VYLCYRCKKDKKSPKKFSAENDMDPGIVPEQLSGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGRVLNLPQDIQSFLKRLPSRVADLPVLIVRRHGTE-DTHRDFTVRRHKVVEAVLWLKTNNLFFKDIEIDRDVIQSLPENGIPDELR 257
BLAST of mRNA_P-littoralis_Contig694.27.1 vs. uniprot
Match: A0A7D9LNP2_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LNP2_PARCT) HSP 1 Score: 169 bits (429), Expect = 1.060e-45 Identity = 90/196 (45.92%), Postives = 123/196 (62.76%), Query Frame = 1
Query: 46 PLEKLGWARLEMQTNFQQTMTARRMHVCTVCSERWDTAEDGPGDGGAVYSCPRCKKDKKSPKLFSADSNMDPGSVPVKLQDLTRTEEMLIARCCLIMRVPYLKGGQRGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQPRGLR 633
PL +L + + EM + F CT+C E W T ++ + VY C RCK+DKKSPK FSA+++MDPG VP +L+ LT+ EEMLI+R C IMRV GGQRGY GHV+N+ QDI + LP AD+P++I+RR G E H+D VRR +V A+ WL NNP++++I +D + LP +G P LR
Sbjct: 259 PLHELEFVQNEMHS-FHLDQEHLEHRQCTMCKEAWPTRQNLASE---VYICYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAE-DTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPHELR 449
BLAST of mRNA_P-littoralis_Contig694.27.1 vs. uniprot
Match: A0A6S7I194_PARCT (ATP-dependent DNA helicase n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7I194_PARCT) HSP 1 Score: 169 bits (427), Expect = 1.290e-44 Identity = 90/196 (45.92%), Postives = 123/196 (62.76%), Query Frame = 1
Query: 46 PLEKLGWARLEMQTNFQQTMTARRMHVCTVCSERWDTAEDGPGDGGAVYSCPRCKKDKKSPKLFSADSNMDPGSVPVKLQDLTRTEEMLIARCCLIMRVPYLKGGQRGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQPRGLR 633
PL +L + + EM + F CT+C E W T ++ + VY C RCK+DKKSPK FSA+++MDPG VP +L+ LT+ EEMLI+R C IMRV GGQRGY GHV+N+ QDI + LP AD+P++I+RR G E H+D VRR +V A+ WL NNP++++I +D + LP +G P LR
Sbjct: 256 PLHELEFVQNEMHS-FHLDQEHLEHRQCTMCKEAWPTRQNLASE---VYICYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAE-DTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELR 446 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig694.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig694.27.1 >prot_P-littoralis_Contig694.27.1 ID=prot_P-littoralis_Contig694.27.1|Name=mRNA_P-littoralis_Contig694.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=217bp ANVKQRDLAEFHAARPLEKLGWARLEMQTNFQQTMTARRMHVCTVCSERWback to top mRNA from alignment at P-littoralis_Contig694:100046..100996- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig694.27.1 ID=mRNA_P-littoralis_Contig694.27.1|Name=mRNA_P-littoralis_Contig694.27.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=951bp|location=Sequence derived from alignment at P-littoralis_Contig694:100046..100996- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig694:100046..100996- >mRNA_P-littoralis_Contig694.27.1 ID=mRNA_P-littoralis_Contig694.27.1|Name=mRNA_P-littoralis_Contig694.27.1|organism=Pylaiella littoralis U1_48|type=CDS|length=651bp|location=Sequence derived from alignment at P-littoralis_Contig694:100046..100996- (Pylaiella littoralis U1_48)back to top |