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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 288 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 288 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791439.1650786-CDS-P-littoralis_Contig694:124127..124203 | 1680791439.1650786-CDS-P-littoralis_Contig694:124127..124203 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig694 124128..124203 + |
| 1680791439.1779838-CDS-P-littoralis_Contig694:125690..125762 | 1680791439.1779838-CDS-P-littoralis_Contig694:125690..125762 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig694 125691..125762 + |
| 1680791439.1889932-CDS-P-littoralis_Contig694:126268..126340 | 1680791439.1889932-CDS-P-littoralis_Contig694:126268..126340 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig694 126269..126340 + |
| 1680791439.2004375-CDS-P-littoralis_Contig694:129509..129577 | 1680791439.2004375-CDS-P-littoralis_Contig694:129509..129577 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig694 129510..129577 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig694.34.1 >prot_P-littoralis_Contig694.34.1 ID=prot_P-littoralis_Contig694.34.1|Name=mRNA_P-littoralis_Contig694.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=96bp
LAGTIPPELGNLAALEYLELEENELSSIPKELGGLSELQKLYLSSNQLTG
PIPPELGKLEALQQLHLWSNKLSGSIPPELGGLGALQELDLYFNQL back to topmRNA from alignment at P-littoralis_Contig694:124128..129577+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig694.34.1 ID=mRNA_P-littoralis_Contig694.34.1|Name=mRNA_P-littoralis_Contig694.34.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5450bp|location=Sequence derived from alignment at P-littoralis_Contig694:124128..129577+ (Pylaiella littoralis U1_48)
CTTGCAGGCACCATCCCACCAGAGCTGGGGAACCTCGCAGCACTGGAGTA
CCTCGAGCTTGAGGAAAACGAGCTTAGTGGTGAGGGAGCGTGCATGTTTG
TTTTATTTTGACTTTTACAAAATGAGTCCTGCACACGCATGGGTGAGTAG
GTGTTCTAGAAGGTGGGGAAATAACTTTTTATTTTCCCCCTTAATTCGTA
ATTGCTCTTTTTTTTACCACAGGGACTATCCCTCCGGAGCTAGGGCAGCT
TGGGGCCCTTCAGTCCCTGCAGCTTTGGGGGAACGCGTTGAGCGGTGAGT
CATTGAAATCAAGGCTTTAATGTTTTCACACCATTGTGTATGGCGGCCAG
GATTCCTGCACACGCAGTTTGCTGGTTTGCCCAAGCCAGAGTTCCTTCAG
TGCTGCGAGCTTTCCCAGCTCCGGTGGGATGGGGCCTGCAAGCGTAAGAG
TATATTCAAGTTATAACGCAGCGGGAGAGAGAAAAAACTATACCGGCTTC
TAGAACACCTACTCACCCACAATTCCCCGCTGCGTAGCGAAAGATGTTCC
GCGAGTTCCGAAATTGCGAAATTTCGTACTCGCCTATGGAATTGTGGGTG
AGTAGGTGTTCTACAAGCGGGAATATTTTTTTCTCTCTCCCGCTGCATTA
TAATTTGAATATACTCTTACGCTTGCAGGCCCCATCCCACCGGAGCTGGG
AAAGCTCGCAGCACTGAAGAAACTCTGGCTTGGGCAAAACCAGCTAACTG
GTGAGAGATATTTATGTGATAGATCCCGCCTATGCATGGGTGAGTAGCTG
TTCTAGAACGAGAAGGCATTCTCATTTTTTTGTTTGCCGCTTTATTGCTT
GTGCAGGGCCAATACCCAAGGAGCTGGGAACCCTCACAGGGCTAAAGAGG
CTCTCGCTGCCCAACAACCAGCTTTTAGGTAAGGTGCCGCGACTGCAAGG
AACGTGTTCATTCTCCAAGCGTTTCAGACTGCCGCTTCTAGAACATGTGT
CGTGCATACGCATCGACAAGTAGGTGTTCTAGAAGCCGGGAAGTATTTTT
TTGTTATTGCCCGCTAAACTGGATTTTTTTCTTCCGCTTGCAGGCCCCAT
CCCGCCGTAGCTGGGGAACCTCGCATCACTTAGGTTCCTCGAACTTCACT
ACAACAAACTAAGTGGTGCGTCAGAAGGTAGCATGTTTTACGTTAAATTT
TAAGAATGAGTAAAAGCGGAAGAAACAAATCTAGTTTTGCGGGCAATAAC
TCTAGCGGAGAAACTTTCTACGGATTTCTAGAAGTTTCGGATACTAAATT
TCTACCTTTTCTCTGGATTTCTTATGCAGGAAGCATCCCGAGGGAGCTGG
GAGGGCTGGGCAAGCTGGAGAGGCTCTGGCTCTCGAAAAACGAGCTCACC
GGTGAGGGAGCGTGCATGTTTGTTTTTATTTTAACTTTTACAACATGAGT
CCTGCACACGCATGGGTGAGTAGGTGTTCTAGAAGCCGGGGGCATAGGCA
GGACACGTATTCTAAAAGAAGCATGGCCATGCATTTGCCTATTTCGTTTC
TTTTCGTGTGCAGGTTCCATCCCCAAGGAGCTGGGGGGTCTCAGCGAGCT
TCAGAAACTTTATCTGTCTAGCAACCAGCTCACAGGTGAGACAGAACCAA
TGGGGCAATAGATGTGTCACACCTACTGCAGCTGGTTGTTCGTAAGGCTG
AGAACCGTCAGTGCTGCGAGATTTCCCAACTCCGGTGGGATGGGGCCTGC
AGGGAACGAACAAAAAACCGAATATAATAGTGGGGAGTAAAAAATGAATC
CCCCCGGCTTCTAGAACATGACCTCCTCACCTATGCATTGACAGGACCCA
TCCCTGAAATATGATCTGGAAACACTTGTACCTAGTGACTCACCACTTAG
CTCGTTTCCGTCGAGACAGAGGTACTTCAGTGCTGCGAGGTTCCCCAGCT
CTGGTGGGATGGTGCCTGCAAGCGGAAGAGAAAATGCGAATTCAGCGGGC
AATAGCAAAATACGAAGTATAATTTCCCCGGCTTCTAGAACACCTTCTCA
CTCATGCATAGGTGAGTAGATATTCTAGAAGGCGGGGAAATTATTTTTAA
TTTCCCGCTTAAATTCGTATTTGCTCTCTTGCTACATACAGGTCCTATTC
CTCCGGAACTAGGGAAGCTTGAGGCCCTTCAGCAACTGCACCTTTGGAGC
AACAAGTTGAGCGGTAAGTGCATATTTTTGGCCTTGGCTTCCATAGATCA
TCGGTCCTGCCCACGTGTGTGCGGGACTCATTTTGTACTTAAAATTTAAC
ATAAAAAAAAACATGCACGCTCGCTCACCGGTGAGCTTGTTGTTTGAGAG
CAAGAGCCACTCCAGCTTGCTCAGCCCTCCCAGCTCCCTCGGGATGCTTC
CTGCACAAGAAATCCAGAGGAAAGGTAGAAATTTAGTATCCGAAACTTCT
AGAAATCCGTAGAAAGTTTCTCCGCTGGGTTCTAGAACACCTACTTGTCA
ACGCGTACGCGGGATTCATCCGTTCAATGTTTTTGCTTGAATCGAAACTA
GTCGTGTAGCTCTCGCCGCTAGTTTGTGCATTCACCTGTCAGGTCGTTGC
CGTTGAGAAGTAGCTGGATCAGCGCCGTCGGCTTCCTGAGCTCTCTCGGT
ATCGTTCCTGGATACCCAAGAAAGTCAAATTAAGGGAGTATTGGATGATG
TGTGTGCCTTGCCCTCTAGAACATGACCTACTAACCCATGCGTAAGCGCG
ATTCATCCTGACATTTGTTGTGGGGAATACCATAAAATATGTACCTGGTA
CGTAGTAACTCACGTTCAAATTGTTTCTCTCAAAATCGAGGACTGTCAGT
GCTGCGAGATTTCCAAGCTCCGGCGGGATGTGGCCTGTGGCAAACAGGCA
AAAACCGAATTTAGCGGGGAATAAAAAACAATCCCCCGGCTTCTAGAGCA
CCTACTTGCCGATGCATCGACAAGTAGGTGTTCTAGAAGCCGGGAAGTAT
TTTTTTGTTATTGCCCGCTAAATTAGATTTTTTGCTTCCGCTTGCAGGCC
CCATCCCGCCGGAGCTGGGGAACCTCGCATCACTTAGGTCCCTCGAACTC
CACTACAACAAACTAAGTGGTGCGTCAGAAGGTAGCATTTTTTACGTTCA
ATTTTAAGAATGAGTAAAAGCGGAAGAAAAAAATCTAGTTTTGCGGGCAA
TAACTCTAGCGGAGAAACTTTCTACGGATTTCTAGAAGTTTCGGATACTA
AATTTCTACCTTTTCTCTGGATTTCTTGTGCAGGAAGCATCCCGAGGGAG
CTGGGAGGGCTGAGCAAGCTGGAGAGGCTCTGGCTCTCGAAAAACAAGCT
CACCGGTGAGGGAGCGTGCATGTTTGTTTTTATTTTAACTTTTACAAAAT
GAGTCCTGCACACGCGTACGCGGGATTCATCCGCTCAATGTTTTTACTTG
AATCGAAATTAGTCGTGTAGCTCTCGCCACTAGTTTGTGCATTCACCTGT
CAGGTCGTTGCCGTTGAGAAGTAGCTGGATCAGCGCCGTCAGCTTCCCGA
GCTCTCTCGGTATCGTTCCTGGATACACAAGAAAGTCAAATTAAGGGAGT
ATTGGATGATGTGTGTGCCTTGCCCTCTAGAACATGACCTACTAACCCAT
GCATGAGTGAGAAGGTGTTCTAGAAGCCGGGGAAATTATACTTCGTATTT
TGTTATTGCCCGCTGAATTCGTATTTCTCTTCCGCTTGCAGGCACCATCC
CACCAGAGCTGGGGAACCTCGCAGCACTGAAGTACCTCTGTCTTGACGGA
AACGAGCTAAGTGGTGAGTCACTAGGTACAAGCGTTTCCAGATCATATTT
CAGGGATGGGTCCTGTCAATGCGTTGACAAGTAGGTGTTCTAGAACCCAG
CGGAGAAATTTTCTACGGATTTCTAGAAGTTTCGGATACTAAATTTCTAC
CTTTCCTCTGGATTTCTTGTGCAGGAAGCATCCCGAGGGAGCTGGGAGGG
CTGAGCAAGCTGGAGTGGCTCTTGCTCTCGAACAACAAGCTCACCGGTGA
GGGAGCGTGCATGTTTTTTTTTGTGTTAAATGTTACAAAGTGAGTCCTTC
ACCTATGCGTGTGCAGGACTCATTTTGTAACATTTAACATTaaAAAAAAA
CATGCACGCTCCCTCACCGGTGAGCTTGTTGTTCGAGAGCAAGAGCCACT
CCAGCTTGCTCAGCCCTCTCAGCTCCCTCGGGATGCTTCCTGCACAAGAA
ATCCAGAGGAAAGGTAGAAATTTAGTGTCCGAAACTTCTAGAAATCCGTA
GAAAGTTTCTCTGCTGGGTTCTAGAACACCTACTTGTCAACGCGTGTGCA
GGACCGATGTTCTGGACGCCTCATTTCGTGGATGGAACATATTGGTTCTA
GAATGATGAGAATGCTGTCATACAACGGTTGATTCATTCTCATTCCGTAC
TGCTTTTTTGCGTTGTACAGGAGCCATTCCCAAGGAGCTTGGAGCTCTGG
CCAAGCTGGAGCAGGTTGGGCTTGGCAACAACGAGCTTACCGGTGAGGCA
CAGCTAGCCGAGCTATTTTTGTAGAGTACTTGTGACATGGCTTCTAGAAC
ATAAATGTGTCCTGCACACGCAAGTAGGTCATGTTCTAGAAGCCGGGGGG
AATAATTTTCTAATTCCCCGCTAAATTCGGTTTTTGCTCGTTCGCTACAG
GCACCATCCCGCCGGAGCTGGGAAACCTCGCAGCACTGACGTACCTCAAC
CTTACGGAAATCAGCCAAGCGGTGAGTCACTAGGTATAAGTGCTGATACT
CCCCGGTCAAATTTCAGGATGCTTCTAGAACATATAGTAACCTACTTGCC
GACGTCGATGTTGATTAGGTGTTCTAGAAGCCGGGAAAATTGTTTTATGT
TACTGCCCACTAAACTAGTATTTTTTCTTCGGCTTGCAGGCCCCATCCCG
CAGGAGCTGGGGAACCTCGCAGCACTGGAGTACCTCGAACTTAACTACAA
CGAGCGAAGTGGTGAGTCACAAGGTATACATTGTTAACGTTAAATTTCAA
GAATGAGTCCTGTCAATGGCATAGGTGAGTAGGCCATGTTCTAGAAGCCG
GGGGATTTTTTATTCTATTTTCCCCGCTCAATTCGGTTTTTGCTCGTTCG
CTGCAGGCCCCATACCGCCGGAGCTGGGAAACCTCGCAGTAGTGAAGAAT
CTCGGCCTTCCGTTAAATCAGCTAACCGGCGAGTCACTAGGTACACGTAT
TGATGATAATTTCATATAATATTTTCAGGATGAGTCCCGCGGTGAGTAGG
CCATCACTTATCTAGAAATCGAAACATCGATACAATGGCGGCATTCGGCT
TATAATTTACACTTTTCACGAATCTACCACAGGGTCTATACCGCCGGAAC
TTGGGGGCCTGGGCGCTCTGCAAGAACTCGACCTTTATTTCAATCAGCTG
back to topCoding sequence (CDS) from alignment at P-littoralis_Contig694:124128..129577+ >mRNA_P-littoralis_Contig694.34.1 ID=mRNA_P-littoralis_Contig694.34.1|Name=mRNA_P-littoralis_Contig694.34.1|organism=Pylaiella littoralis U1_48|type=CDS|length=288bp|location=Sequence derived from alignment at P-littoralis_Contig694:124128..129577+ (Pylaiella littoralis U1_48)
CTTGCAGGCACCATCCCACCAGAGCTGGGGAACCTCGCAGCACTGGAGTA
CCTCGAGCTTGAGGAAAACGAGCTTAGTTCCATCCCCAAGGAGCTGGGGG
GTCTCAGCGAGCTTCAGAAACTTTATCTGTCTAGCAACCAGCTCACAGGT
CCTATTCCTCCGGAACTAGGGAAGCTTGAGGCCCTTCAGCAACTGCACCT
TTGGAGCAACAAGTTGAGCGGGTCTATACCGCCGGAACTTGGGGGCCTGG
GCGCTCTGCAAGAACTCGACCTTTATTTCAATCAGCTG back to top
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