prot_P-littoralis_Contig694.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig694.4.1
Unique Nameprot_P-littoralis_Contig694.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length207
Homology
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BLAST of mRNA_P-littoralis_Contig694.4.1 vs. uniprot
Match: A0A6H5KGM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGM3_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 9.920e-5
Identity = 54/158 (34.18%), Postives = 62/158 (39.24%), Query Frame = 0 
Query:   21 VRLRRLPLYSELLTRLGPTAARELTEHYAKRYSNSSAGKSGPEVPLRRRFSPPPYRSPEIAPWCVARRSRTGRGCXXXXXXXXXXXXXXXXXXXXXXXXXXEEDSVIISANRGGNGACSMGSSDALDLRFKAEVEKIERILTRIQVMGVERWLQLQRC 178
            V +RRLPLYSELL RLGP AARELT   A       A +   E+ LR   +        I    V     T                              E D             C  G  DAL L FK EVE +ER L R + +GVER LQ +RC
Sbjct:   34 VHIRRLPLYSELLARLGPFAARELTCCDAGHQPEGGAFR---ELWLRYHAT-----YSHILKSSVDSTKETSHA---------GGNFDDKTPQGEAGKVREEIDG------------CDDGCGDALGLSFKREVETVERALWRRENLGVERGLQRRRC 162
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig694.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGM3_9PHAE9.920e-534.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig694contigP-littoralis_Contig694:12835..17209 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig694.4.1mRNA_P-littoralis_Contig694.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig694 12810..17594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig694.4.1 ID=prot_P-littoralis_Contig694.4.1|Name=mRNA_P-littoralis_Contig694.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=207bp
MQRRALFTRMNTEMPGVQKVVRLRRLPLYSELLTRLGPTAARELTEHYAK
RYSNSSAGKSGPEVPLRRRFSPPPYRSPEIAPWCVARRSRTGRGCCCCIS
DQDDVSSDHRTAAEALVVSKAEEDSVIISANRGGNGACSMGSSDALDLRF
KAEVEKIERILTRIQVMGVERWLQLQRCAVSFAVRDRVLIDPRELGGSGQ
LPHFTM*
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