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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1031 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 621 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791438.9887283-UTR-P-littoralis_Contig694:12809..12834 | 1680791438.9887283-UTR-P-littoralis_Contig694:12809..12834 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig694 12810..12834 + |
| 1680791439.0239398-UTR-P-littoralis_Contig694:17209..17594 | 1680791439.0239398-UTR-P-littoralis_Contig694:17209..17594 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig694 17210..17594 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791438.9991446-CDS-P-littoralis_Contig694:12834..12891 | 1680791438.9991446-CDS-P-littoralis_Contig694:12834..12891 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig694 12835..12891 + |
| 1680791439.01064-CDS-P-littoralis_Contig694:16645..17209 | 1680791439.01064-CDS-P-littoralis_Contig694:16645..17209 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig694 16646..17209 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig694.4.1 >prot_P-littoralis_Contig694.4.1 ID=prot_P-littoralis_Contig694.4.1|Name=mRNA_P-littoralis_Contig694.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=207bp
MQRRALFTRMNTEMPGVQKVVRLRRLPLYSELLTRLGPTAARELTEHYAK
RYSNSSAGKSGPEVPLRRRFSPPPYRSPEIAPWCVARRSRTGRGCCCCIS
DQDDVSSDHRTAAEALVVSKAEEDSVIISANRGGNGACSMGSSDALDLRF
KAEVEKIERILTRIQVMGVERWLQLQRCAVSFAVRDRVLIDPRELGGSGQ
LPHFTM* back to topmRNA from alignment at P-littoralis_Contig694:12810..17594+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig694.4.1 ID=mRNA_P-littoralis_Contig694.4.1|Name=mRNA_P-littoralis_Contig694.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4785bp|location=Sequence derived from alignment at P-littoralis_Contig694:12810..17594+ (Pylaiella littoralis U1_48)
ACACCAGGTCGAAGGGGTGGAACAAATGCAGCGGCGAGCATTATTTACTA
GGATGAACACTGAGATGCCGGGTGTTCAGAAGGTATGATATCACCACCAC
CTGAAACTGGCTCTCAAATGCGGCGGAATACATGTACGACTCGTATGATT
TGTATGATAAGTAGAATGACTAGTTGTACAGAGCGTCCGTGTTCTTGCTG
GATGCAGATTACTCCGGTCGCCCCGGTGGTTCAGTTGGTAATCCACGTAA
CCTTCTGGCATTCACGTGTGAGTTCGAATCCCAGTGCACTAACACGATCT
GGTTTTTCTTCTCACAAAGCGCGTGAAAGTAGAAAGCGGTTAATTCGTGA
TTAAACAAAATTCGATCGTACCATCGACGAGGGAAAGGGATCGCTGTCGT
CCCCTTTCTCGCGATAAAAGCTCGACCAAAACAAGGCAAGCACCGCAGAG
GGAAGTGGAGAACCAAAAAAAAAAAAACTGTGTTGACTTCCCCCTGTGTG
ACCCCAGTTGGAGCGTCGACCTACCCGAAAGGTGCAGAGTGGCGTCCAAT
TAAAGGGATGACAACACAACACACACACAGCTGCTGATGTCATCATATCA
TGCCAGGTACTGCTGTACCAGTAGTACAGCGGTGGTAGGTTATGACCTCA
CATCAGGATAGCTGCATGGGTGCAATATTCAATAATAAGTCTTTAGAAAC
AAAGGTAGGTATGTTTGGGGTACCCGGCATCCGATACTGATCTACGGGGA
CCCTCGGGTATGTGTGTCATGGGACGTGATGTCTCACTCTCTGGGAGCTC
TCTCTCTCGTTAATAAATCAAGGTTTTGAGTCGACCTTGGCTCGCGCTTC
TGACAAGGAGCTGTCTGCACCCAAACACGATCGATCGTGTTTGGGTGCGA
TACCCGTCCATCTCTTTCCGGATAGCGTTCTTGTTCCCAGAATGGTCATC
CGTTGGGAGTAGTTTTTTTACATTTTCAGTGTGGGGTTTTGCTGTGATGA
GGTCGAACATGGGCGATTGGTTGCTACAGAATTTCCTTGCTCGGTGGACG
ACAGCATCGCACATCGTCAGTGAGACAAGCGGTAGCAAGTTTTCGGATGC
TCTGGTTTTCATATTTCTTTACTTTTCGTTTTTGGTTTAAATGAGGTGCT
GAAGGATACAGATTGAAACGACACATCTCATTTCTACTCTGGATATGGTT
TTGATTTTCGTGCGCTTTAAACTTGGCTTTTGAATTTCGGTTTGTCTGAT
GGATTTTGGCGTTTGCCTCAGGTTGGCAGCTTGGCGTTGTGCAGAATCAT
TGTGTGAATTGTACTGCAGTCGACAATCATGGGGGGGGGAATGTTGTACC
ATGATCCCCGCCGCAGTACGTCAGTCATTGGTGTTTCTGACAACGGGTTT
TTGGTTTTTTATGTTTGATTTCTTTTCCGCGTTTTTCCTGCGGTAGAACA
GGGGGATTTCTCGTGTCCTGGTGTTTAACTGGCAGAACTTTCTCTGTGAA
GAGATGCTTACAGGCATGATGGTTGAAGGCATTATATTTTGTATTCGAGC
GAGAAAGAGATATATCACGCGTTTTACCTTGCGGGGATATTTCTGGTTTG
TTTAATTTTCAGTAGAAATGTCACAGCAGGGGGCTGTTTGGATATTGGTT
CATGTGAAATAATTAATTGAAACTGCAGTAGATTTGGTGAAGGTTTTCTT
GACGTTTCCGAACACGTTGGAATTGTGCTTCATCATATAACTGGTTTTGG
TTTTGATTTATATTTTGGAAGGAAGGATTTGACATATTCTGATGGTTTAT
TGTTGAGGCTTGAGTGCTTTCCGAAGATTGTTCGAATTGGTCAGTAAGTT
GAAATTTGGTTTTAGTCTGGGAATTTTGGTTGGATGGATTGAAGCATTTT
GGCGGAATAGAAATACCGGTTGGTAGAATATCATCATCTCTACCCTATTC
TACTAGAGTGTCGATTTCATGCGGGTATTTTCCAAGGGTAATTCTTATCT
TTTAGCGGCTTGAGAATTTTTGGAGAGCAAATTTGATGGGTTTGCGATGA
GGAGAGTGTTTTCTCAAGAGGGTTTTTGTTTATTGACGGACCTTGGTGGT
AGTGACTTGACATTTGAAGATTCAGAAGACGTTTTGGATTGAAATGATTG
ATGGTTTGAGATAGGAGTTTTAGAGATGAGTTTTTCGCCGTTTTTCCTGG
CGATCTTGTATGTATGTGAAGAGTTCCGTAGATCGTATCGGAGTACCGAG
TAGGGGGGCTGTTTGGGGTACCCGGCATCCGATACTGATCTACGGGGACC
CTCGGGTATGTGTGTCATGGGACGTGATGTCTCACTCTCTGGGAGCTCTC
TCTCTCGTTAATAAATCAAGGTTTTGAGTCGACCTTGGCTCGCGCTTCTG
ACAAGGAGCTGTCTGCACCCAAACAAGGTAGATGCATATTATTCTTTGTG
GTCGTTGCTCATCTGCAGATTCATCTCGAGAGGCGGTCCATTGACGTGTT
TGACAGGAATGAAGCAAATCTTGTCACTGCAAGCAAAAGAGCAGAGCCTC
TCGTCTCGGTTGAGCGCTCTACAGACACAGGTCTTGAGGAGGAGCCCAAT
GTACCACAACATCTTATGATACCGAAGTAAAGTGAAATTTCGTATAATTT
CTGAAAACGGGATCATACCGCTCTCAATATTGTGCAACAACAGCGTGTAG
AATATAGAGTCACACAAGACGACCACCAAATTGTCATGTTTAGAGCCTTA
CGCCCTCACCGCAGCTGCAACGGGATTTTATCATTTCATCCGCATATTGA
AAAATACTTGGTGATGTAAGTACTGCTTTGAGAGCAGTATGATATTATTA
TGATACATACTTGAGAAGGGAGAATTTGTCCTCTGGACAGACGTTGTGGG
AAAGTATGTACCATGAAGGGGTCCTGTTCCACACTTCCCTCCCCCTTCTC
GAGTCGATCGTGGTTGCCACATCATACAGTACTCGTACAACAAGTAGTCA
AGAAGAAGGCTTCGAGGGGTAAAAAAAAAAAGAATTTGACCGGCCGGCGG
CGAGTCGAATTCATCTTGTCTTCGGCACAATCGTCTGTTAGTTCGGCGTT
TAGTTGTGCAACGGGTCGACCACTCCCGCCATGTATTGTGAAACCAAAAT
TAGTTCCGCAAGAGTTCGAGTGTAATCTCTTTCGGTCCCTCGCCACTAAC
TACGTAAGAGGAATGGCGTTAGGCGGGATTTGAACCCTGGTCTGTCTGTG
ACGACCAGAAATGATATGAAAGTAGATATATATCTCATGGCGACGCCAAT
ATTTGATGTGAAAGGAGGAAATTCGTCCTCGACAGAGACGCCGTGGGAAC
GGACCCCTTATTTGAAGGGATCCTATCCCACAAGTACTCCTCTCTTCTTT
GTTCGTTGCTAATCTTTGCGAGATCCTCGTCTAGAGGAGGCGAACACGTT
GATGCCTTGTGTACTGTAAGAAATATAAATAAAATCGATTTATTCGTCTC
TATAGACGGGGATTTCGTCTAGAGTAAGCTGGCAACGATCACAAGGTGTG
ACATATTGTTATCATCGGAAGTCTTCAAAGTACAGAAATAAGTTCGAAGT
ATAAAATATACCCTCCAAAAGGTCATCGTGTGGCATTTTTCATTTTTGTC
AGATGGATGGTACTGCTGTTCGATACACAAACATCTATATACGCGTCATC
GTTCGTGGTAACTAACTACAGTTATATTACGGATTTCCAAGGCTCTATCG
TGTGCCTTCCTCAGTCCGCCTGGTATTTATGTTTGTAAGTTCTCGGCCGG
CCTTGGACCCCCTCCTAAAAAAACAAAAAAACGCAGGTGGTACGCCTTCG
CCGTCTACCGTTGTATTCGGAGCTCCTCACGAGGCTAGGCCCCACGGCGG
CTAGAGAGCTGACGGAGCATTATGCTAAGCGTTACAGTAACAGCAGTGCT
GGTAAAAGTGGGCCAGAAGTACCACTGCGCCGCCGTTTCTCGCCCCCCCC
CTACAGGTCTCCTGAAATTGCTCCTTGGTGTGTTGCCAGAAGAAGCCGTA
CCGGCAGAGGATGCTGCTGCTGCATCAGTGACCAGGACGATGTATCATCC
GACCACCGTACCGCCGCCGAAGCACTAGTAGTGAGCAAAGCTGAGGAAGA
CAGCGTCATCATCAGTGCAAATAGAGGTGGCAATGGCGCTTGTAGTATGG
GCAGCAGTGACGCCCTTGACCTGCGCTTCAAGGCGGAAGTGGAGAAAATC
GAGCGAATCCTGACTAGGATACAAGTTATGGGAGTCGAGCGTTGGCTTCA
GCTCCAGCGATGTGCCGTGAGCTTCGCCGTGCGTGATCGCGTGCTCATTG
ATCCTCGTGAGCTAGGCGGCAGTGGACAGCTCCCACATTTCACGATGTAG
GCGTGCTTGAAGTCTTGTTGTGGAGACTGCAGCATCATGACCTAGCTACC
GTAGGATGGCTGAGATTGATTTTAGTTTGAACGACAAACAGATCTTGTGG
CCCCACCCTTACGTGAGAGGGGAATGAATGGTGTTCATAGGGCGGGAGTT
GAATCCGGGTTCGTTATCACCAGAAGTATACATCTCGTCGCGGCGCCACT
GTGCAAAGAGAAAAGAGGGAATCCGCCCTCGATACAAGTTGAGGGAATGT
ACCCCTGATGAAGGGGTCCTGTTCCACAATGATGGCAGTTATTTTGTTGT
TTTTGTTATTTTGGTGTCGAGTGTATGTGTGTTGTCATCCAATTGATTCT
GGACGCCAGTCGTTTCGTAATTAACTAAGTTGGGC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig694:12810..17594+ >mRNA_P-littoralis_Contig694.4.1 ID=mRNA_P-littoralis_Contig694.4.1|Name=mRNA_P-littoralis_Contig694.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=621bp|location=Sequence derived from alignment at P-littoralis_Contig694:12810..17594+ (Pylaiella littoralis U1_48)
ATGCAGCGGCGAGCATTATTTACTAGGATGAACACTGAGATGCCGGGTGT
TCAGAAGGTGGTACGCCTTCGCCGTCTACCGTTGTATTCGGAGCTCCTCA
CGAGGCTAGGCCCCACGGCGGCTAGAGAGCTGACGGAGCATTATGCTAAG
CGTTACAGTAACAGCAGTGCTGGTAAAAGTGGGCCAGAAGTACCACTGCG
CCGCCGTTTCTCGCCCCCCCCCTACAGGTCTCCTGAAATTGCTCCTTGGT
GTGTTGCCAGAAGAAGCCGTACCGGCAGAGGATGCTGCTGCTGCATCAGT
GACCAGGACGATGTATCATCCGACCACCGTACCGCCGCCGAAGCACTAGT
AGTGAGCAAAGCTGAGGAAGACAGCGTCATCATCAGTGCAAATAGAGGTG
GCAATGGCGCTTGTAGTATGGGCAGCAGTGACGCCCTTGACCTGCGCTTC
AAGGCGGAAGTGGAGAAAATCGAGCGAATCCTGACTAGGATACAAGTTAT
GGGAGTCGAGCGTTGGCTTCAGCTCCAGCGATGTGCCGTGAGCTTCGCCG
TGCGTGATCGCGTGCTCATTGATCCTCGTGAGCTAGGCGGCAGTGGACAG
CTCCCACATTTCACGATGTAG back to top
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