prot_P-littoralis_Contig693.45.7 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig693.45.7
Unique Nameprot_P-littoralis_Contig693.45.7
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1185
Homology
BLAST of mRNA_P-littoralis_Contig693.45.7 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI)

HSP 1 Score: 883 bits (2282), Expect = 2.040e-299
Identity = 631/1312 (48.09%), Postives = 749/1312 (57.09%), Query Frame = 0
Query:   14 RGHRYQNIQYD-GNIYGHPQYGNGATPGIGSSQNRGVFTPPMAASVNNGAGVGIPKFLTRRGAAPG-TRFPNPATAYGIHAYPLPAXXXXXXXXXXXXXXXXSSAGDSRQDPKFGGVSGQLLNAAERLSPPVKTLSG-------------------------KSTRGTVSNVQAFAHHGSYAPSAGGAGEVPGAIPSRGS---GYGLRRSDNEDDRRHEQW-------RGDNGVESELERGSQQLQQKQHPPPSPSXXXXXXRAAPVRANGSRASSSGSLASGRPPSAXXXXXXXXXXXXXXXXXXXXXXXXXXSPRA-------------------------VRNSPPMNQEPPPAGQGTTAAQLRTASIPASPATGSTPAIPLAWPIIEAAGERQLGGPAEDRRLKPEQEMQNKSPFQGCPIPDCIMARSDGIGISWMTRHLESHTKVAMEKPQKELYIRSSVAEALHEICLDSEVPPSQRKFERKRMSRQDVALLNKPPVAIGHLAGIMETVATGDNPDPNVRRCALDLAIGGCDGVTREDTIVRCDKCRAWYHVTCGQMVLGDGISSAGARDETICRTCARLSIGLPAGKDPTVSLQKQLSSVREKRKKMMEFLEADVKGGAPEAVFGFKLSVEDEDEAGVAPGLDKKDGTADAQGESGXXXXXXXXRNQRREEGRPGCAAARCQKPSRTDSKFCCDACGVLHAEAMLSDALKHTLEAKIGLERGRRLRETRELKSRKNEIGIAMKKVEFPRVPGFKTERETAVQAMVVRRCRLWQRLIEIGAYWEKVSGSR-SLAASAKGAAQNSXXXXXXXXXXXXXXXXGNATP--------------DGNGVVGSGSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------------------------------------------------------------SNSRQATVAMEIEGGGGVAAPQATPAAXXXXXXXXXXXDLASD----RLTPVETDKTGAEPEVEVDVGLDDAGLLSTAVGEAWTYAAVGNMNVVWYCPPGGGEADRLSTRAQLLEFWRRRHGHARIPGCFTFRGKDAPAQWKRTHVTHLSEEARPXXXXXXXXXXXXXXXXXXXXXXXXXDSATPRIGGVHDLTCVYCGEQAGPRVDEHLELCYRMVIAKRNHRLKHAKLRPLPDQHFLQGGSRSGAASVTEPVAVPATAALDSPAAIGRQLLSRHIAYADFDSLPDPTRFQLHQDLKGWKSSPSRLDFLYKELVRQRNAAIYELQALDKEEAELEVNLRRDWMDDDLRSVPRVRINY 1184
            RG+   + +YD  N Y   +Y   +  G+G   +RGV+ PP A  +NN  GVG  ++ +RRG  PG TR+PNP+TAY   +YP P+                      RQ   FGGV+GQLLNAA +LSP  K  SG                         KST        A +  G YAPS GG+GE+PGA  SRG    G G  R     DR   Q        R      +  E   QQ+++++H   +P   XXXX                          XXXXXXXXXXXXXXXXXXXXXXXXXX                                                         P+ P        PL+W  IE AG+R+LG PAE+RR K   E +  SPFQGCPI DC M  SDGI +SWM RHLESHTKVAMEKPQKELYIRSSVAE LHE+CLDSEVP +QRKFER++MSR   ALL+ P   IGHLAG++ETV TGDN  P+VRRCA DLA+GGC+G+TRE TIVRCDKC AWYHV+CGQMV GDGISS  AR+ET+CRTCAR++IG P GKDPT +LQKQLS VREKR KM+EFLE DV+ GAP  VF   L++ D   AG   G+  KDG A+     G         ++R  + RP CAAA C + SR DSKFCCDACGVLHAEA L+ A++H +E   G++RGRRLRETRELK+RK ++G+AMKKVEFPRVPGFKTERETA+ A+VVR+CRLWQRLIEIGAYWEKVSGSR  + A+ + AAQ S      XXXX      G   P              D  GV+ S S++          XXXXXXXXXXXXXXXXXXXX      A                                                            +++ +A   +++ GGGG A  +   AA             A D           + + A+PE E+D GL+    ++   G+AWTY + G   V+WYCPPGGGEADR ++  QL  + R R+G+ R+PG FTF GKDAP QW+R       +  RP                             P  GGV +  CVYCGE+ GP V EHLE CYR   A RN RLKHA LRPL D HFLQGGSR GAASVTEPV+VP +AALDSPAAIGRQLLSR IAYA+FDSLPDP+RFQLH DLKGW+ SPSRLDFLYKELVRQRNAAIYELQALD+EEAELEV+LR DWM DDLRS+PR+RINY
Sbjct:   39 RGYSSYDGRYDINNAYQTTRYDPSSPRGLGGPHDRGVYAPPTATIINNNRGVGSSQYPSRRGGPPGATRYPNPSTAYDNFSYP-PSPRPPP---------------SPRQPQGFGGVAGQLLNAAGQLSPSNKRASGGRAVFDDEVTIGPAAAGGEKSAARLKSTSAXXXXXXA-SRFGLYAPSGGGSGEIPGAGSSRGDDGDGGGNARFR---DRGRSQIAKAPTNPRYQERTRNSFEERDQQMREQKHQQRAPHQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSRP--------PLSWITIERAGKRRLGVPAEERRTKLGGENETVSPFQGCPIHDCPMGSSDGISVSWMARHLESHTKVAMEKPQKELYIRSSVAEILHEMCLDSEVPRAQRKFERRKMSR---ALLDTPRAGIGHLAGMIETVVTGDNKSPHVRRCAHDLAVGGCEGITREGTIVRCDKCMAWYHVSCGQMVRGDGISSEEAREETLCRTCARIAIGAPQGKDPTATLQKQLSLVREKRTKMLEFLEEDVETGAPCGVFDLPLNIRDVSTAG---GVGPKDGNANGPDAGGNSNGGNGGVDKR--DNRPPCAAASCGRESRQDSKFCCDACGVLHAEAFLAKAIRHHVEESAGIDRGRRLRETRELKTRKQQVGLAMKKVEFPRVPGFKTERETALHALVVRKCRLWQRLIEIGAYWEKVSGSRVGVLAATRTAAQTSSRKATAXXXXSVTAS-GAVDPALSRSAPERLAGGRDRGGVIASASSSGGVQVELDVGXXXXXXXXXXXXXXXXXXXXEAEVSGAGKEVVGXXXXXXXXXXXXXXGTEGQGASNGCVGWEGGGAKKRAREDGDGPPQQAAKSLKQTSNGEAASGIDV-GGGGAAITEPPSAAVAMGAQSKGKGKAALDPQAAESPTAAMEVSSADPEAEIDTGLEVPDTMAEIAGQAWTYGSFGKERVLWYCPPGGGEADRCTSSEQLQAYLRERYGNGRVPGQFTFSGKDAPPQWERV------DARRPDNGSLIAKDKDKAAVPP------------PPSGGVQNFMCVYCGEETGPWVSEHLERCYRKTTAMRNERLKHATLRPLRDNHFLQGGSRLGAASVTEPVSVPPSAALDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAIYELQALDREEAELEVHLRHDWMKDDLRSIPRMRINY 1294          
BLAST of mRNA_P-littoralis_Contig693.45.7 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE)

HSP 1 Score: 856 bits (2211), Expect = 4.000e-289
Identity = 639/1311 (48.74%), Postives = 757/1311 (57.74%), Query Frame = 0
Query:   14 RGHRYQNIQYD---GNIYGHPQYGNGATPGIGSSQNRGVFTPPMAASVNNGAGVGIPKFLTRRGAAPG-TRFPNPATAYGIHAYPLPAXXXXXXXXXXXXXXXXSSAGDSRQDPKFGGVSGQLLNAAERLSPPVKTLSG------------------KSTRGTVSNVQAF------AHHGSYAPSAGGAGEVPGAIPSRGSGYGLRRSDNEDDRRHEQW-------RGDNGVESELERGSQQLQQKQHPPPSPSXXXXXXRAAP----------------------------VRANGSRASSSGSLASGRPPSAXXXXXXXXXXXXXXXXXXXXXXXXXXSPRAVRNSPPMNQEPPPAGQGTTAAQLRTASIPASP-ATGSTPAIPLAWPIIEAAGERQLGGPAEDRRLKPEQEMQNKSPFQGCPIPDCIMARSDGIGISWMTRHLESHTKVAMEKPQKELYIRSSVAEALHEICLDSEVPPSQRKFERKRMSRQDVALLNKPPVAIGHLAGIMETVATGDNPDPNVRRCALDLAIGGCDGVTREDTIVRCDKCRAWYHVTCGQMVLGDGISSAGARDETICRTCARLSIGLPAGKDPTVSLQKQLSSVREKRKKMMEFLEADVKGGAPEAVFGFKLSVEDEDEAGVAPGLDKKDGTADAQGESGXXXXXXXXRNQRREEGRPGCAAARCQKPSRTDSKFCCDACGVLHAEAMLSDALKHTLEAKIGLERGRRLRETRELKSRKNEIGIAMKKVEFPRVPGFKTERETAVQAMVVRRCRLWQRLIEIGAYWEKVSGSR-SLAASAKGAAQNSXXXXXXXXXXXXXXXXG-------------NATPDGNG----VVGSG---------------------STAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASN---------------------SRQATVAME----------IEGGGGVAAPQATPAAXXXXXXXXXXXDLASD----RLTPVETDKTGAEPEVEVDVGLDDAGLLSTAVGEAWTYAAVGNMNVVWYCPPGGGEADRLSTRAQLLEFWRRRHGHARIPGCFTFRGKDAPAQWKRTHVTHLSEEARPXXXXXXXXXXXXXXXXXXXXXXXXXDSATPRI--GGVHDLTCVYCGEQAGPRVDEHLELCYRMVIAKRNHRLKHAKLRPLPDQHFLQGGSRSGAASVTEPVAVPATAALDSPAAIGRQLLSRHIAYADFDSLPDPTRFQLHQDLKGWKSSPSRLDFLYKELVRQRNAAIYELQALDKEEAELEVNLRRDWMDDDLRSVPRVRINY 1184
            RG+   + +YD    N Y   +Y   +  G+G   +RGV T      +NN  GVG  +  +RRG  PG TR+PNP+TAY   +YP                         RQ   FGGV+GQLLNAA +LSP  K  SG                  + +   + +  A       +  G YAPS GG+GE+PGA  SRG       SD   DR   Q        R  +G     E   +Q+++++H   +P        +AP                                           S RPP+A    XXXXXXXXXXXXXXXXXXXXXX                                     A  S P  PL+W  IE AG+R+LG PAE+RR+    E +  SPF+GCPI DC M  SDGI +SWM RHLESHTKVAME+PQKELYIRSSVAE LHE+CLDSEVP +QRKFER++M+R   ALL+ P   IGHLAG+MET+ TGDN DP+VR    +   G C+G+TRE TIVRCDKC AWYHV+CGQMV GDGISS  AR+ET+CR CAR++IG P GKDPT +LQKQLS VREKR KM+EFLE DV+ G P  VF   L++ D + AG   G++ KDG A      G         + R  + RP CAAA C + SR DSKFCCDACGVLHAEA L+ A++H +E   G++RGRRLRETRELK+RK ++G+AMKKVEFPRVPGFKTERETA+  +V RRCRLWQRLIEIGAYWEKVSGSR  + A+ K AAQ S    XXXXXXXXXX                    D  G    V GSG                     +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ASN                     S+QA  +++          I+ GGG AA   TP+A             A D      T   TD + A+PE E+D GL+     +   G+AWTY +     V+WYCPPGG EADR + R QL  + R R+G+ R+PG FTF GKDAP  W+R    H  +                              +A P    GGV + TCVYCGE+ GPRV EHLE CYR   A RN RLKHA LRPLPD HFLQGGSR GAASVTEPV++P +A LDSPAAIGRQLLSR IAYA+FDSLPDP+RFQLH DLKGW+ SPSRLDFLYKELVRQRNAAIYELQALD+EEAELEV+LR DWM DDLRS+PR+RINY
Sbjct:   15 RGYSSYDGRYDINNNNGYQSTRYDTSSPRGVGGPHDRGVAT-----IINNNRGVGSSQHPSRRGGPPGATRYPNPSTAYDNFSYP----------------PSPRPXXXXRQPQGFGGVAGQLLNAAGQLSPSNKRASGGRAVFDDEVTIGPAAAGGEKSAARLKSTSAXXXXXXXSRFGLYAPSGGGSGEIPGAGSSRGDLGDGGGSDRFRDRGRSQIARAPTNPRYQDGTRKSFEERDEQVREQKHQQRAP---HQRKASAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRPPAAPADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPSRP--PLSWITIERAGKRRLGVPAEERRMMLGGENETVSPFRGCPIHDCPMGSSDGISVSWMARHLESHTKVAMEQPQKELYIRSSVAEILHEMCLDSEVPRAQRKFERRKMAR---ALLDTPRAGIGHLAGVMETMVTGDNKDPHVRHEPQE---GXCEGITREGTIVRCDKCMAWYHVSCGQMVRGDGISSEEAREETLCRACARITIGAPQGKDPTATLQKQLSLVREKRTKMLEFLERDVETGTPCGVFDLPLNIRDVNTAG---GVELKDGNAKGPAAGGNSNGGNGGVDMR--DNRPPCAAASCGRESRQDSKFCCDACGVLHAEAFLAKAIRHHVEESAGIDRGRRLRETRELKTRKQQVGLAMKKVEFPRVPGFKTERETALHGLVARRCRLWQRLIEIGAYWEKVSGSRVGVLAATKTAAQTSSRKAXXXXXXXXXXSGAFDPALSRSAPQRQTGVRDRGGSIASVSGSGGIQVELDVGGCSIAAAAKNDTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGASNICVGWEGGGAKKRAREGGDGPSQQAANSLKQTSNGEAASGIDVGGGSAAIPETPSAAAMGAHSKGKGKAALDPQAAESTTAATDVSSADPEAEIDKGLEGPDTTAEIAGKAWTYGSFDKERVLWYCPPGGREADRCTNREQLQAYLRERYGNGRVPGQFTFSGKDAPPHWERVDA-HCPDNGS-------------------LIAKHKDKAAVPPSPSGGVQNFTCVYCGEETGPRVSEHLERCYRKTTAMRNERLKHATLRPLPDNHFLQGGSRLGAASVTEPVSLPPSACLDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAIYELQALDREEAELEVHLRHDWMKDDLRSIPRMRINY 1268          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig693.45.7 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQA3_ECTSI2.040e-29948.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L313_9PHAE4.000e-28948.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1137..1157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 593..629
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 805..875
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 819..838
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..363
NoneNo IPR availableCDDcd15517PHD_TCF19_likecoord: 486..534
e-value: 2.60822E-6
score: 43.6911
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 476..539
e-value: 8.8E-6
score: 27.0
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 486..535

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig693contigP-littoralis_Contig693:125569..133942 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig693.45.7mRNA_P-littoralis_Contig693.45.7Pylaiella littoralis U1_48mRNAP-littoralis_Contig693 124861..134323 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig693.45.7 ID=prot_P-littoralis_Contig693.45.7|Name=mRNA_P-littoralis_Contig693.45.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1185bp
MDGRGYNNVYSYARGHRYQNIQYDGNIYGHPQYGNGATPGIGSSQNRGVF
TPPMAASVNNGAGVGIPKFLTRRGAAPGTRFPNPATAYGIHAYPLPAAPA
PGPAPPPPPPPPPSSAGDSRQDPKFGGVSGQLLNAAERLSPPVKTLSGKS
TRGTVSNVQAFAHHGSYAPSAGGAGEVPGAIPSRGSGYGLRRSDNEDDRR
HEQWRGDNGVESELERGSQQLQQKQHPPPSPSPPLPSPRAAPVRANGSRA
SSSGSLASGRPPSASGSSGGGRNRSSSSSSSGGGVRGRSSSPRAVRNSPP
MNQEPPPAGQGTTAAQLRTASIPASPATGSTPAIPLAWPIIEAAGERQLG
GPAEDRRLKPEQEMQNKSPFQGCPIPDCIMARSDGIGISWMTRHLESHTK
VAMEKPQKELYIRSSVAEALHEICLDSEVPPSQRKFERKRMSRQDVALLN
KPPVAIGHLAGIMETVATGDNPDPNVRRCALDLAIGGCDGVTREDTIVRC
DKCRAWYHVTCGQMVLGDGISSAGARDETICRTCARLSIGLPAGKDPTVS
LQKQLSSVREKRKKMMEFLEADVKGGAPEAVFGFKLSVEDEDEAGVAPGL
DKKDGTADAQGESGGGSGSGGGRNQRREEGRPGCAAARCQKPSRTDSKFC
CDACGVLHAEAMLSDALKHTLEAKIGLERGRRLRETRELKSRKNEIGIAM
KKVEFPRVPGFKTERETAVQAMVVRRCRLWQRLIEIGAYWEKVSGSRSLA
ASAKGAAQNSRRQAAVAAAAAAAAAAGNATPDGNGVVGSGSTAAASGASA
ASAGGGGSAAPPQTAVTGAGGTAEASGSPASNSRQATVAMEIEGGGGVAA
PQATPAALEREGGGGTAADLASDRLTPVETDKTGAEPEVEVDVGLDDAGL
LSTAVGEAWTYAAVGNMNVVWYCPPGGGEADRLSTRAQLLEFWRRRHGHA
RIPGCFTFRGKDAPAQWKRTHVTHLSEEARPTKKTKADGAAAAAAAVAAA
AAAAAADSATPRIGGVHDLTCVYCGEQAGPRVDEHLELCYRMVIAKRNHR
LKHAKLRPLPDQHFLQGGSRSGAASVTEPVAVPATAALDSPAAIGRQLLS
RHIAYADFDSLPDPTRFQLHQDLKGWKSSPSRLDFLYKELVRQRNAAIYE
LQALDKEEAELEVNLRRDWMDDDLRSVPRVRINY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD