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Homology
BLAST of mRNA_P-littoralis_Contig693.25.1 vs. uniprot
Match: D8LQA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA9_ECTSI) HSP 1 Score: 144 bits (364), Expect = 7.810e-38 Identity = 81/142 (57.04%), Postives = 100/142 (70.42%), Query Frame = 1
Query: 1 MLNPVLPDEIASKEIPTQSFAGVKELFAFRKFQGIVLVRRLHHFAQALNVIWAVLFLLASFRRGV-VQIIVSLITFPILLVFFACIIRALSEIAISVLLVPSLLVKSAGVSGRGAVNSR----DEDLAAYGVTTPGDAGTIV 411
MLNP+LPDE+A K++P Q F+GVKELF FR FQGIVL RRLH Q NV+W+ L L R G + IIV++I +PI + + AC +R +SE+A+SVLL+PSLL KS G GRGAV D DLAAYGV+ DAGTIV
Sbjct: 1 MLNPMLPDEVAVKQVPKQRFSGVKELFVFRHFQGIVLARRLHFVGQVWNVVWSTLVLFGILREGTALGIIVAIIVYPIFVFYMACFLRLMSELAVSVLLLPSLLAKSQGNGGRGAVAEPVGVGDADLAAYGVSGVDDAGTIV 142
BLAST of mRNA_P-littoralis_Contig693.25.1 vs. uniprot
Match: A0A6H5L548_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L548_9PHAE) HSP 1 Score: 144 bits (363), Expect = 1.090e-37 Identity = 82/142 (57.75%), Postives = 101/142 (71.13%), Query Frame = 1
Query: 1 MLNPVLPDEIASKEIPTQSFAGVKELFAFRKFQGIVLVRRLHHFAQALNVIWAVLFLLASFRRG-VVQIIVSLITFPILLVFFACIIRALSEIAISVLLVPSLLVKSAGVSGRGAVNSR----DEDLAAYGVTTPGDAGTIV 411
MLNP+LPDE+A K++P Q F GVKELFAFR FQGIVL RRLH+ AQ NV+W+ L L FR G + IIV++I +PI + + AC +R +SE+ +SVLL+PSLL KS G GRGAV D DLAAYGV+ AGTIV
Sbjct: 1 MLNPMLPDEVAVKQVPRQHFYGVKELFAFRHFQGIVLARRLHYVAQVWNVVWSTLVLSTVFREGNPLAIIVAIIIYPIFVFYMACFLRLMSELTVSVLLLPSLLAKSQGNGGRGAVAEPVGVGDADLAAYGVSGVDGAGTIV 142
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Model size | 1458 |
| Hectar predicted targeting category | signal anchor |
| Exons | 2 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-26_005480.1 |
| Cds size | 414 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791438.0725746-CDS-P-littoralis_Contig693:82143..82236 | 1680791438.0725746-CDS-P-littoralis_Contig693:82143..82236 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig693 82144..82236 + |
| 1680791438.0913649-CDS-P-littoralis_Contig693:88720..89041 | 1680791438.0913649-CDS-P-littoralis_Contig693:88720..89041 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig693 88721..89041 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791438.1045954-UTR-P-littoralis_Contig693:89041..90085 | 1680791438.1045954-UTR-P-littoralis_Contig693:89041..90085 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig693 89042..90085 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig693.25.1 >prot_P-littoralis_Contig693.25.1 ID=prot_P-littoralis_Contig693.25.1|Name=mRNA_P-littoralis_Contig693.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=138bp
MLNPVLPDEIASKEIPTQSFAGVKELFAFRKFQGIVLVRRLHHFAQALNV IWAVLFLLASFRRGVVQIIVSLITFPILLVFFACIIRALSEIAISVLLVP SLLVKSAGVSGRGAVNSRDEDLAAYGVTTPGDAGTIV* back to topmRNA from alignment at P-littoralis_Contig693:82144..90085+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig693.25.1 ID=mRNA_P-littoralis_Contig693.25.1|Name=mRNA_P-littoralis_Contig693.25.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7942bp|location=Sequence derived from alignment at P-littoralis_Contig693:82144..90085+ (Pylaiella littoralis U1_48) ATGCTCAATCCCGTGCTGCCAGATGAGATTGCCTCGAAGGAGATCCCGAC
ACAGAGCTTTGCAGGAGTGAAGGAGCTGTTTGCATTTAGAAAGGTGAGAG
TTGTAGCTCACAACACAAACAAGAACAGAGCGGGAGATGGATGCAGAGAT
CCAAAGAACACACGATGACTATGCGATGACATCGTTTATATCATGCTTTT
ACAGCAGCAGCGGCAGCAGCAGCAGGTGGAGCTCCTCTCCGCACTACCGC
CGTACTCCACGCACACGCGTTTTTCATGCTAGACATTTACTTGATCAAGC
ATGCCGTTTAGAACTTTCAACTTTCCGAAAACGTTGGTTTTGTGCTCCTA
CTCCTGAGTAGTATTATTCTCTCTTCATATACAGCAGTACTCTCTTAAGA
TCGCTGTGTTGTTTTTCCAGGGTAAGACCACTTATTATAGCTGCAAAAAC
CCTCCTTATTAGGCCCACTCTTATGGTAGAGCCGAAAACTGGAATCCAAG
GGTTTCACATGAGGAACTGGAATCCAAATTCCAGGCCTGGAAAATATTTC
TATCTTATGGGGGTTGTTTTCGGCCGAAACTGGAAAATATTTTCCAGTTC
TCCGGATTCCAGGCGACTCGCCTGGAATCTGCCCTCGGATTCCAGGCCAA
ATGACCTGGATTCCAGGCCTAGAATCCGTCGCGCGCGCGCCGCGCGCGCA
GCCACGAGGTTCCGCCGCAGTGGTTCACAGCACACAACAAGCACAAATAC
AAACAACCGAGCACCCAAACACACTGGCCAGGTGCAGGTACCAAAGCGAC
GTGCGATCCTGGCCGTGCTGGCGATAATAAGGCCCACTCTTATGGTAGAG
CCGAAAACTGGAATCCAAGGGTTTCACATGAGGAACTGGAATCCAAATTC
CAGGCCTGGAAAATATTTCTATCTTATGGGGGTTGTTTTCGGCCGAAACT
GGAAAATATCTTCCAGTTCTCCGGATTCCAGGCGACTCGCCTGGAGTCTG
CCCTCGGATTCCAGGCCAAATGACCTGGATTCCAGGCCTGGAATCCGTCG
CGCGCGCGCCGCGCGTGCACCGCGCGCGCAGCCACGAGGTTCCGCCGCAG
TGATTCACAGCACACAACAAGCACAAGTACAAACAACCGAGCACCCAAAC
ACACTGGCCAGGTGCAGGTACCAAAGCGACGTGCGATCCTGGCCGTGCTG
GCGATAACGCTCGCCGCTCTGCGCCGTCAGCGACAGTTTATCGAAAATAG
CCCAAACCGCCTGCCGTCCATCCGGCAACCCCATCTGATTTCCAATCGCT
GCCCAAATTTTCCAGTTCTCCCATAAAGTTGGCACCAGTCTGACTGTCCG
ACTTGGAATATCAGGCTTGGAAAACGCTTTTCCAAGTCGAGAAATTCCAG
CTGCCCATCTACCATAAGATTGGGCCTAACGCTCGCCGCTCTGCGCCGTC
AGCGACAGTTTATCGAAAATAGCCCAAACCGCCTGCCGTCCATCCGGCAA
CCCCATCTGATTTCCAATCGCTGCCCAAATTTTCCAGTTCTCCCATAAAG
TTGGCACCAGTCTGATTGTCCGACTTGGAATATCAGGCTTGGAAAACGCT
TTTCCAAGTCGAGAAATTCCAGCTGCCCATCTACCATAAGATTGGGCCTT
AGAAAAGGCCTTTTTTGATCTTGGGCGGTTTGACCACTTGTTATAGATGG
AAAAACCCCCTTTTTTGATCTCAACTTTTCTAATCACTTTTTCTAAGCGA
TTCGATCGACCAGAAAACGCTTATTGAAAAAGTTTGGGCCCTCCTCACAC
AGCCTCTCACGATGGGTCGGGTGACTTGAACAACATACAGCGGTATTATT
TTTGCAAGCCTATCGATACCTCGCGGCCCCAGATGACCTACAGAGGAGAG
GGACCAGACACACAGCTCAAGGGCGATTGCTTTGTTGTTGCCGTGGGTTC
AATCGTTCGAGAGCAATGAACGGAACTCAAAAGTAGTGTGGGGTGAGGGA
GGAGAGCGGGCAGGAGGAGGGAGCCGCAGCAAGCAGCAGCAGCAGCAGGT
ATTTTGTATTTTGGGCCGCTACATGAGTTTGGTTTTTCATCCATCACTCT
CGAACCAATTGAGCCACAGCAATGCCAAGGCCATCGCCCGTGAGCTATGC
CTCTGGTCCTTGTCCTCCGGTTGTTATCTAAGGCCGCAAGGTATCAACTG
GCTAGCAATAGAAGCGTTGCAGAACCGACGAGTTGTGAAAAAATTGAGAA
GAAAGGCCGTTGAGTCCAGCAAATACATACTGCTGTATATATACTCCTGT
ACAGCAGTACAGACAGACAGACGACGGAGATTTCTTCTCTCTTGTCACGA
GTGATCGGTTTCTGCAAGAGCTAGATTGCTAGCCTATTGATGCCTTGCGG
CCCAAGATTACCAACGGAGGAGAGGGACAAGACACACAGCTCACGGTCGA
TGGCTTCGGTATTGCTGTGGCTCAACTGGTTCGATAGTTATGGAAGAGAA
ACCAAACTGGTGTACCTGCGCAAAATACCTTGCTGCCCTGCTGCTGCTGC
GGACTTCCTTCTCTTTTCCTATTTTTTTTCACACGTCGTCGACGCCTGCA
CTCTTTTTTTGTGAGCCTGTTGATGCCTCGCGGCCTCAAAGGACAATCGG
AGATGCACGACCATACACACAGCTTACGGGGCATGGCTTTGATATTGCTG
TGGCTTCATTCATTCGAAAGTGATCAACAAATACGTTACATACAGCAGCA
GCAGCAGCAGCCTGTTGAAACGATGTCAACACCGTCTGTCTATAAAAAAA
AAATGAATCTCCCACGGAAAAAATAAAATCAATCGCGGTTATAAGAAGTT
GTTGTTGTTGTTGTTGATTCTCACATTAGCTCACTACCGCCGCAGTCTAG
CCCGTGGTCACAAACCAGGCACATATCGTGCTAGGAGGAAAAAATAAAAA
AATAAAAAATATGGACTATGATCACCCACAGTCAGATCAGACGTGGTACC
GTTGGGGTACCATCTGTGGTGGCCAGGATACCAAACAAATACAGAAAAAA
TAATAACAGGCTCGAAAGAAAAACAAAAATTGGAAACAGTCCGACGAACA
AAAAAAAAAAAAATAACCAAGACAAACCTCAACCATAACCATATACTTCG
AAGTACTTCGTGCATCGAACCAGGGCCCAGGGCCATGACAGACCAAAGCA
GACGCAAACCAGGGCGATGGCCCAGTAACTATATGATCAACAGACGAAAG
ACAAAAATAAAATAAAAAAGAAGAAGATACAGGGAGGGCACAAAGACTGT
GAGGGAGTGCATTCGAACACAAACATAACAAACAGGCCGCTGCCAAACAA
AGAAAGCAGGGGAACGAAAAGGGAAAAGAAGATCGGAAGTACCGGAAGTC
GGGGGGGGGGAGGGGAAGGTGATAAAAATAAAATAAAAGGCATGCAATCA
ATCGCAAACGTGTCTTGCCACGAGGTCTGCCTGTTCACGCTTGCTCTCCT
CAGTCGCACTCATGCCTCCTGCTACTGGCACCACCGTACCCAGTTGTTTC
TGCCCCACATCTTTGGCAGCAGCTACACCACCACTCCGCCCTACAGGTTT
TCCACTCCGGCCACCCCGTAGCTTGGCATTGGACTGCTTCTTCTTGTGCT
GTGCAACTCCAACCCCACTACCCCGCTGCCCTTGTGCCCCCCCGTACTCC
TTCTCTCGTTTACCCCCGCCATCCGTTCTCCCTCTTTTAGTCAAGGCCTG
CCCCTCAGCCGCGTCCCTCTCCCTTTTCCGTCGACGTGTCTCTGATAGGT
CTTCCTCTTTCTTAAACCACTCGTCCGTGAACCGCCGCGCACCCTCGTCG
ATCCTGTCGTACCACTCGCCAGCTCTCTTGGCACTTGCCTCTAGCACCGC
CGTGTACCGCAGTCGCAGTCTGTGTGAAGGAGTTCGCTGCCTGGGAGGCT
CATGGGCAAGCCTCCCAGGTTACCAAACTCCATGCATTTTGTTTTCGTTT
TCGCGAAAAAAAGGTCCGAAACAATTTATTTTTGCGAAATCGAAAACGAA
GGAACGCCTCCCCGGAAGACGTTGAAACGAAAACACGCCTCTTTCGTTTT
TTTTTCCCGACTAATCAGAGCCCAATTTCGTTTTTGTTTTCGCTATTTCG
TTTTTTTTGGCCTTCCGTTAATACGGGCTCTAATGGAACAATCTACCGTC
CGTTATCCACTGTCAACCTCTGATCAACTGCTGCAGTACTGATGTACACG
ACATTCACGCGTACGTAGTTTACAGCTGCTGAGTACTACCTCGAAGTACT
TCGTGGTATAAACATAGGCAGAACTCGTGTCATACGTAATTGTACAGCAG
AAACCTGTTGTATTGTACAGCGGAAACCTGTTGTGCAGCAGGAACGCTGC
CGTAGCTTTGGGGCGTTGCAGCAGCGATTTCATACAGCAGGTGGGGCGTG
GTTTGTGGAGCGCACTCTTTCGTGCGCGGTCGAATTGGCGCGGTCGACTT
GTCGCGGTCGACCCTTGTTTGTTTATACGGAAGGCCTTTGTCTTTGGACG
CTGCAGCAGGATGGGCGTCGCTTGCTGCAGCTTCGGGTCACGACTCAACA
CAGCTGGTCGTTGTCTAGCACCGCTGGTCGTTGTTTGAGAGTCATGGGGC
AACGGCCAAATGAGGGTACAGCAGTATTTGCAATTTGCACCATCATTTTA
CTGTACTTTTTGGCCTTAAACAGGGTACCGGGTCCAACGGGCACCTCCAG
GTAAAGTCGCGACCCTCCCCCGGCACAGAGTGTTCCTAAATCCTATGCAA
CAACACGGTGGCTCATTGTCTCTATACACTGCTGTGGTCAGGGGTCGACA
GCCCTCTCACCAAGGTCACAGCAGTAGCCTATCATACTTCGGAGGATATC
ATGACTCTAAATCTATATCACTTTTAGGTTATGTGTGGCTCCAAACGCGC
TGTACAACAGTTTTAGATTGGTGTTGGGGTTTCAGGTTTACTGTCAGCAA
ACCTGAAACCCAGTGAGGTACGACGTATCATGCCCGGGGGCGTCTGCTCA
GCGGGCTCCGAAGCTACCGTAGGATATAAATGCGAGGATGTAACCGGTGA
CACGCAGTACCTTTTGTTGGCCAAGAACGTGCGGGTGTTCATACCGTCTG
ATGATATGTTTCATACGAGTATTGCTGCATCCTCTCTTTGCCGTTGCCCG
ATACATTCACACGCATTTTTTTTTCACACGGGAGGGCGCGAGAAACAAGA
CGATAATAGAGGTGGAGGTGCGCATTGAGAGCAGTCTACAGGTCCACCCC
AGATTATGGTACCAAATGCTGGCCTGCATTATCAGCCGCAACAAGGATTG
CGTGTTGAACTGCTGGTGTTTTTCTTTTTTGGTATCAACAGAACCACTGC
TCTTTCCGAACTTGGATTGATGACCATGCCTTCGAAATGATTCAAAGACT
CGCAGCTTGACTGCGTAGGGTTTGCACTCTATCTACTCTGGACGCCAGTC
TACTGCTGTACACCATTCGGTATAGCTAAGGGTGCACCAGCCGGGATCAC
ATATAAAGGTCGCGCCGGAATTATTTTCGCATGTTCGGGTGTGCCCCCAG
CTTTTCCCCGAGGCCACGACATTCTTGACGTTGCAACCGCATTTTCCTCA
TGTTGTAGAAGCGTACCGCACGGCGGTGCAACAGTGGTCATTTCATGGTG
TATGCATGTGTCGTGTGCAGAACTACCGTACGTGGCTCCGATGATTCCCC
TGCACCTATGGCTCCCAAAAATAGAGGCAACTGCTGTGCTTGACGACAGC
GGTGGTGGGATTGGGTTATGCTGTAGGTGCTTTCATGAGACTGAACTGAA
ACGTTCGGTGTGCCGACAGCTTGGCGTACACGGTATATACCCATGTGCGA
TTACGGTAGGCAGGCGCGACCTCAATAGACGACATTTTTGAACGCAGAGC
GGAGGACGAGAAAAACTAAAATTCACAAAGAATTACAATGCGGCATTCAC
GCAAGGAGAGCACACGTATTCAAATGGCTTCCTTTGATAAGAATACGACC
TGTACGCCATCTCAACTCCGATGCGTGGCCATCTTCAAAGACCGTCAGGA
AATCGCCCCCTTCCCCCAAATAAGGGGTGGGTAGCGGCGAGTGGCCACAC
CGGAAGGCAATCACTTCGAAGCCATCACCTCTACGCAAGACATGCTATAC
GCGCAACGTCTCGGCGTCCTCCTTGCAGGCGATTCTTGTGATGGATGCAG
CAACCTCGCCCTTGACCTGACGACTCGCCGAAAGAAACGAACGCCTCAAA
AGTCTTCGGGCTCTACGGTAAAATTATAAAATCTATTCTAATAAGGTGAA
ACACGTTTTCACACTGTCGGAGACCAAACTTGTCTTCACACTGTCGCAGA
CTATCCGTTGGACGTGTGTGCGCGCAGCCCTGGCCTTGTACGCCCGGTTG
TATGGACCTGTTTTGAAGAATAATGAAAGACACACGCAGGAGAAAATCGA
GACTACTGCTGAGAGTACCCTCTTCTTCCACCCGAATTCCCTCCGCGCGC
GCACGCTACTTTCTCCTCGCATCGCAGTTCCAGGGCATTGTCTTGGTGCG
CAGGTTACACCATTTCGCCCAGGCCTTGAACGTAATTTGGGCGGTGCTCT
TCCTGTTGGCATCTTTCCGGCGAGGAGTGGTTCAGATTATCGTTTCCCTC
ATCACCTTCCCCATCCTCTTAGTCTTCTTTGCCTGCATCATCCGGGCACT
GAGTGAGATAGCCATCTCCGTGCTGCTCGTGCCGAGTCTCCTCGTCAAAT
CGGCGGGAGTCTCGGGGAGGGGGGCCGTCAACAGCAGGGACGAAGATCTG
GCCGCATACGGCGTGACCACTCCCGGCGATGCTGGAACGATCGTTTGACG
ACAACGGCCTGGCTCAAACCAGTGCGTTTGGATGGAAATGTAGAAAAACA
GTAGCTTCGGTGAAGGATAGGAACCTCGTTCTGGGTCGGACTGGAACAAT
CTGGGGGTCGTTGCTACACTCTGCTGCTGCTGTTGTCTTGCGTTGCTGTG
CGCATCCGTACCTTACTACTGTAGTGTCTCGGAGCCCGTTGGTTGTGGAG
GAATTTCGTTTCTTTCAAGATGAATTTGGAATTGAACTCCAAGGCCAAGG
CCACACGGTGATGGTATACATATAAGGCAAAGCCATTTTTGATTTTGAGA
ATAAAAGCGACTCAAATAGCGGCATCTACTCCAACAGGAGTATTAAAACG
TGCGGTAGCGGTGCTACATAAGGCTATCGCAGTGCAGCAGTAGCGGCGCA
ACGCGACGCGTTCCTCTCTTGCTTGTGTTGCCTCGGAATGGCACTTGTAT
ATTATCGGTCAGGCTGACCACACTACCGCAAACTTTGTCTCACGTATCGA
AGTTTTCTAAGAGGCCGCGATGTATTTTGGCTAGGTTCCCTGTATTTCTC
TCGTCCTTGGACTGTCAATTCATCTTGTGGCCGCAAATAGCTTGCACCGG
TGTACCTGTAAGAGAAAAGTGTGGCGGTGAAGTCGTGGTGTTCATGCGAT
CTCATCCATGCTGGGTGTTCGGGTCCCGGCCGATTGTTTTTTAGTGTGTG
TGCGGCTTTCTTTAGAGATTTTGGCGATTTGCCTTGGATTTGAGTTTTTT
TGCTGCTACAGCTGTGAACGATTTGGCGCAACGACAACCCTGTCTTGATG
CTTAATTCAAGAATGCTCTTCCAATGCATCAAATGCACCCCTCATGTGTG
ACGAAACTGGTCGTCGTTCAATCTGGCCCGTACTTCGTACAGGGTTTGAT
TTGAAAATGGCAGTAATTCTTCCTTCGAAGTACCGTTTTTTATTTATTTA
TTGCGGCGACCTTGCTTCATCTCCAATCAACCTTGGTCTTTGTCTTGTCG
AAAATCGCAATAAAATCAACAGTTCAATTCTTTATGACACTC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig693:82144..90085+ >mRNA_P-littoralis_Contig693.25.1 ID=mRNA_P-littoralis_Contig693.25.1|Name=mRNA_P-littoralis_Contig693.25.1|organism=Pylaiella littoralis U1_48|type=CDS|length=414bp|location=Sequence derived from alignment at P-littoralis_Contig693:82144..90085+ (Pylaiella littoralis U1_48) ATGCTCAATCCCGTGCTGCCAGATGAGATTGCCTCGAAGGAGATCCCGAC ACAGAGCTTTGCAGGAGTGAAGGAGCTGTTTGCATTTAGAAAGTTCCAGG GCATTGTCTTGGTGCGCAGGTTACACCATTTCGCCCAGGCCTTGAACGTA ATTTGGGCGGTGCTCTTCCTGTTGGCATCTTTCCGGCGAGGAGTGGTTCA GATTATCGTTTCCCTCATCACCTTCCCCATCCTCTTAGTCTTCTTTGCCT GCATCATCCGGGCACTGAGTGAGATAGCCATCTCCGTGCTGCTCGTGCCG AGTCTCCTCGTCAAATCGGCGGGAGTCTCGGGGAGGGGGGCCGTCAACAG CAGGGACGAAGATCTGGCCGCATACGGCGTGACCACTCCCGGCGATGCTG GAACGATCGTTTGA back to top
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