|
|
Homology
BLAST of mRNA_P-littoralis_Contig693.2.1 vs. uniprot
Match: A0A6H5KS39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS39_9PHAE) HSP 1 Score: 841 bits (2172), Expect = 6.220e-279 Identity = 622/1068 (58.24%), Postives = 667/1068 (62.45%), Query Frame = 2
Query: 65 MPDMETPRISSGILEEQGSPKSV---------QPSKRPRDEGSPVRGKRSRGQNGSISHARDTSFAYVSPAAL--DSGADFEPTTPPPLCESPSKINQTPSSFAPFSGGAAAANLSCRLRHRCCSPAPGPAATTPACAALARRQGRVPPHVAPPSLGATDPIFHAALLRLLHGRNGEHCPEAVGWRWRGDTPARFDHWPCALHPVVMDLLACVSAGEEQVVKTGCDKKHTTXXXXXXXXXCCRGDDKLAPAPREAAWRAPRPRTPSAYRGAPATATEGTVAVATTPTAAPSS--SFALGQTPLSALRRPGSSCRLSSKNRVRFSTHDMSVVDTPDPQRGGSEEGMISALGGLESILSAAERVRELAAAAPRQHGGRQ-------------QYEGYFDRFSAAGGDPTDGGVGDGTATADEQAAVAEPTVRSKAPATVDRVSIRSAAXXXXXXXXXXXXXXXXIGEDEGSAKAAAVVATEKEEDVDDYLTREAKSVRDDSAAFVAVLEEIASSDSAPGEIALAGGWGPEHSNAAAFYAKELVLLCGTKTGDQADTVPPSAAVAGAG-VGSHLRVRYLDVLSCLVRYNLKLLLNVCQCE-PQEEQGDAAVDDESCDEQXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGVSDEGEKAASDPTANLPPSPAXXXXXXXXXLTVIVPGRAALLREQGLLDAAWGSSVTAQA---EGGVCGCVSVLDDKGTLEFNTEDVAALLTLALGRVHPFMPLAARITAAAEEAGWDGGAGEEEDGDDDTLDARVWAAVQQYTLECRAATDARTSSAAYATAAIAGTPPPAHLFSSPVSSEAMXXXXRVALSSRKAGRPAAVDDAASPGAGSSAEEGEER----EGGAEAEVAVPVAVPGNPTTTAGLLEGVPEGEGSTAASAVVAEVQLTVDEAADLLEFVAAARFIAQIFAEPVVAAGVSAGRWSCAMRLAEQVRKLAEEEQQAQQVAP----TAAPTSSLNNMLCLGALADVQGLGLVMAQQARYAPALEAVLKRELRQALRRGQGLKRRIRHRLQI-GAPDVFSFPMIMPACQLANH 3148
MPDM+TP+IS GI EE+ Q SKRPRDEGSPVRGKR RG NG IS + S S + L S P PPLCESPSKINQ PS FA +S GA A + +RR+GR+P H APPSLGATDPIFHAALLRLLH RNG+HC EAVGWRWRGDTPARFDHWPCALHP VMDLLACVSA EEQVV TGCDKKH C EAAWRAPRPRTP A+RG PA A G TTP AAPS A QTPLSALRR GSS RL SKNRVRFSTHDMSVVDTPDPQRGGS +GM+SALGGLESILSAAER+RELAA P GGR+ QYEGYFDRFSAA XXXXXXXXXXXXXXXX ED D L EAKSVR+DSAAFV VLEEIA+ D+APGE+ALAGGWGPEH NAAAFYA+EL LCGTKTG V G G VGSHLRVRYLDVLSCLVRYNLKLLLN C+CE P E+Q + + D XXXXXXXXXXXXXXX XXXXXXXXX S PTANLP P+ L+VIVPGRAALLR+QGLLDAAWGSSVTAQA E G+CGCVSVLDDKG LEFNTEDVAALLTLALGRVHPFMPLAARIT AA+EAGWDG D D+ LDARVWAAVQ+YTLE R A XXXX A D S G EGE + GA A VA +A P P G V E GS A ++LTVDE+ADLLEFVAAARFIAQ+ AEPVVAAGV+ GRWSCAMRL+EQVRKLAEE TA PTSSL+NMLCLGALADVQGLGL MAQQARYAPALEA LKRELRQALR GQGLKRRI+HRLQ+ GAPDVFSFPMI PACQL ++
Sbjct: 1 MPDMDTPQIS-GIFEERAPXXXXXXXXVVGVQQASKRPRDEGSPVRGKRGRGANGDISLSLKISVPATSSSPLVPSSSLPASPLWVPPLCESPSKINQAPSPFASYSSGAXXXXXXXXXXXXXXXXXXXXXXXXXA-SVTSRRKGRMP-HAAPPSLGATDPIFHAALLRLLHRRNGDHCAEAVGWRWRGDTPARFDHWPCALHPSVMDLLACVSASEEQVVLTGCDKKHAES--------CNGXXXXXXXXXXEAAWRAPRPRTPWAHRGRPAAAAAGV----TTPIAAPSPLPPXASAQTPLSALRRSGSSRRLPSKNRVRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSAAERIRELAAGGPGNSGGRERGGLERRGGDDGRQYEGYFDRFSAA-----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFDAPLETEAKSVREDSAAFVTVLEEIANGDAAPGEVALAGGWGPEHRNAAAFYAEELAFLCGTKTGVSGREVGGRFVSGGGGAVGSHLRVRYLDVLSCLVRYNLKLLLNTCECETPDEQQQELDIMDXXXXXXXXXXXXXXXXXXXXXTHGXXXXXXXXXXXXXXXXXXXXXSVPTANLPSPPSPTAAA----LSVIVPGRAALLRQQGLLDAAWGSSVTAQAATAERGLCGCVSVLDDKGALEFNTEDVAALLTLALGRVHPFMPLAARITVAAKEAGWDGCG----DDGDEALDARVWAAVQEYTLEGRRAAXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXGGAADKLPSSGFAVKGGEGEAKADAGSDGARASVA-DLASPSVP----GSRGSVSEENGSAAG------LELTVDESADLLEFVAAARFIAQLLAEPVVAAGVAGGRWSCAMRLSEQVRKLAEEXXXXXXXXXXXXXTAPPTSSLSNMLCLGALADVQGLGLAMAQQARYAPALEAALKRELRQALRGGQGLKRRIKHRLQLPGAPDVFSFPMITPACQLIHY 1007
BLAST of mRNA_P-littoralis_Contig693.2.1 vs. uniprot
Match: D8LQ83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ83_ECTSI) HSP 1 Score: 644 bits (1662), Expect = 3.590e-207 Identity = 476/913 (52.14%), Postives = 505/913 (55.31%), Query Frame = 2
Query: 476 PHVAPPSLGATDPIFHAALLRLLHGRNGEHCPEAVGWRWRGDTPARFDHWPCALHPVVMDLLACVSAGEEQVVKTGCDKKHTTXXXXXXXXXCCRGDDKLAPAPR---EAAWRAPRPRTPSAYRGAPATATEGTVAVATTPTAAPSSSFALGQTPLSALRRPGSSCRLSSKNRVRFSTHDMSVVDTPDPQRGGSEEGMISALGGLESILSAAERVRELAAAAPRQHGGRQQYEGYFDRFSAAGGDPTDGGVGDGTATADEQAAVAEPTVRSKAPATVDRVSIRSAAXXXXXXXXXXXXXXXXIGEDEGSAKAAAVVATEKEEDVDDYLTREAKSVRDDSAAFVAVLEEIASSDSAPGEIALAGGWGPEHSNAAAFYAKELVLLCGTKTG-DQADTVPPSAAVAGAGVGSHLRVRYLDVLSCLVRYNLKLLLNVCQCEPQEEQGDAAVDDESCDEQXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGVSDEGEKAASDPTANLPPSPAXXXXXXXXXLTVIVPGRAALLREQGLLDAAWGSSVTAQA---EGGVCGCVSVLDDKGTLEFNTEDVAALLTLALGRVHPFMPLAARITAAAEEAGWDGGAGEEEDGDDDTLDARVWAAVQQYTLECRAATDARTSSAAYATAAIAGTPPPAHLFSSPVSSEAMXXXXRVALSSRKAGRPAAVDDAASPGAGSSAEEGEER----EGGAEAEVAVPVAVPGNPTTTAGLLEGVPEGEGSTAASAVVAEVQLTVDEAADLLEFVAAARFIAQIFAEPVVAAGVSAGRWSCAMRLAEQVRKLAEEEQQAQQVAPTAA----------PTSSLNNMLCLGALADVQGLGLVMAQQARYAPALEAVLKRELRQALRRGQGLKRRIRHRLQI-GAPDVFSFPMIMPACQLANH 3148
PH APPSLGATDPIFHAALLRLLH RNG+HC EAVGWRWRGDTPARFDHWPCALHP VMDLLACVSA EEQVV TGCDKKH C G EAAWRAPRPRTP A+RG PA G A ALRR GSS RL SKNRVRFSTHDMSVVDTPDPQRGGS +GM+SALGGLESILSAAER+RELAA P G XXXXXXXXXXXXXXXX EDVD L EA+SVR+DSAAFV VLEEIA+ D+APGE+ LAGGWGPEH NAAAFYAKEL L GTKTG + P + G VGSHLRVRYLDVLSCLVRYNLK QGLLDAAWGSSVTAQA E G+CGCVSVLDDKG LEFNTEDVAALLTLALGRVHPFMPLAARIT AA+EAGWDG D D+ LDARVWAAVQ+YTLECR A XXXX S AVD+ S EGE + GA A VA +A P P G V E GS A ++LTVDE+ADLLEFVAAARFIAQ+ AEPVVAAGV+ GRWSCAMRL+EQVRKLAE PTSSL+NMLCLGALADVQGLGL MAQQARYAPALEAVLKRELRQALR GQGLKRRI+HRLQ GAPDVFSFPMI PACQL ++
Sbjct: 2 PHAAPPSLGATDPIFHAALLRLLHSRNGDHCAEAVGWRWRGDTPARFDHWPCALHPSVMDLLACVSASEEQVVLTGCDKKHADS---------CHGXXXXXXXXXXXXEAAWRAPRPRTPWAHRGGPAAVPAG--ATTXXXXXXXXXXXXXXXXXXXALRRSGSSRRLPSKNRVRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSAAERIRELAAGGPGNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVDAPLEAEARSVREDSAAFVTVLEEIANGDAAPGEVTLAGGWGPEHRNAAAFYAKELAFLSGTKTGVGGRELRGPFVSGGGGAVGSHLRVRYLDVLSCLVRYNLK-----------------------------------------------------------------------------------------------------QGLLDAAWGSSVTAQAATAERGLCGCVSVLDDKGALEFNTEDVAALLTLALGRVHPFMPLAARITLAAKEAGWDGCG----DDGDEALDARVWAAVQEYTLECRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSAGG----AVDELPSSDFAVKGGEGEAKADAGSDGARASVA-DLASPSVP----GSRGSVSEENGSAAG------LELTVDESADLLEFVAAARFIAQLLAEPVVAAGVAGGRWSCAMRLSEQVRKLAEXXXXXXXXXXXXXXXXXXXXXXPPTSSLSNMLCLGALADVQGLGLAMAQQARYAPALEAVLKRELRQALRGGQGLKRRIKHRLQPPGAPDVFSFPMITPACQLVHY 773
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 5448 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-26_005790.1 |
| Cds size | 3090 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791437.0285003-UTR-P-littoralis_Contig693:1959..2023 | 1680791437.0285003-UTR-P-littoralis_Contig693:1959..2023 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig693 1960..2023 + |
| 1680791437.060569-UTR-P-littoralis_Contig693:6038..7787 | 1680791437.060569-UTR-P-littoralis_Contig693:6038..7787 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig693 6039..7787 + |
| 1680791437.0746295-UTR-P-littoralis_Contig693:7814..8359 | 1680791437.0746295-UTR-P-littoralis_Contig693:7814..8359 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig693 7815..8359 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791437.038576-CDS-P-littoralis_Contig693:2023..3706 | 1680791437.038576-CDS-P-littoralis_Contig693:2023..3706 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig693 2024..3706 + |
| 1680791437.048678-CDS-P-littoralis_Contig693:4631..6038 | 1680791437.048678-CDS-P-littoralis_Contig693:4631..6038 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig693 4632..6038 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig693.2.1 >prot_P-littoralis_Contig693.2.1 ID=prot_P-littoralis_Contig693.2.1|Name=mRNA_P-littoralis_Contig693.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1030bp
MPDMETPRISSGILEEQGSPKSVQPSKRPRDEGSPVRGKRSRGQNGSISH
ARDTSFAYVSPAALDSGADFEPTTPPPLCESPSKINQTPSSFAPFSGGAA
AANLSCRLRHRCCSPAPGPAATTPACAALARRQGRVPPHVAPPSLGATDP
IFHAALLRLLHGRNGEHCPEAVGWRWRGDTPARFDHWPCALHPVVMDLLA
CVSAGEEQVVKTGCDKKHTTGGSGGGGGDCCRGDDKLAPAPREAAWRAPR
PRTPSAYRGAPATATEGTVAVATTPTAAPSSSFALGQTPLSALRRPGSSC
RLSSKNRVRFSTHDMSVVDTPDPQRGGSEEGMISALGGLESILSAAERVR
ELAAAAPRQHGGRQQYEGYFDRFSAAGGDPTDGGVGDGTATADEQAAVAE
PTVRSKAPATVDRVSIRSAAAAAAVADDNDGSGSGEIGEDEGSAKAAAVV
ATEKEEDVDDYLTREAKSVRDDSAAFVAVLEEIASSDSAPGEIALAGGWG
PEHSNAAAFYAKELVLLCGTKTGDQADTVPPSAAVAGAGVGSHLRVRYLD
VLSCLVRYNLKLLLNVCQCEPQEEQGDAAVDDESCDEQQDEEPAAADANE
GEEDEDDDDDDDDDSDGGVSDEGEKAASDPTANLPPSPASTAGTAGTALT
VIVPGRAALLREQGLLDAAWGSSVTAQAEGGVCGCVSVLDDKGTLEFNTE
DVAALLTLALGRVHPFMPLAARITAAAEEAGWDGGAGEEEDGDDDTLDAR
VWAAVQQYTLECRAATDARTSSAAYATAAIAGTPPPAHLFSSPVSSEAMP
PPPRVALSSRKAGRPAAVDDAASPGAGSSAEEGEEREGGAEAEVAVPVAV
PGNPTTTAGLLEGVPEGEGSTAASAVVAEVQLTVDEAADLLEFVAAARFI
AQIFAEPVVAAGVSAGRWSCAMRLAEQVRKLAEEEQQAQQVAPTAAPTSS
LNNMLCLGALADVQGLGLVMAQQARYAPALEAVLKRELRQALRRGQGLKR
RIRHRLQIGAPDVFSFPMIMPACQLANHV* back to topmRNA from alignment at P-littoralis_Contig693:1960..8359+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig693.2.1 ID=mRNA_P-littoralis_Contig693.2.1|Name=mRNA_P-littoralis_Contig693.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6400bp|location=Sequence derived from alignment at P-littoralis_Contig693:1960..8359+ (Pylaiella littoralis U1_48)
GGTGCGACGACGTGCCGTAGACGGAGCAAGCCGATTGACAGAAACTGCCC
TGGTACGTACGACAATGCCGGACATGGAGACCCCCCGGATTTCTTCGGGC
ATCTTGGAAGAGCAGGGCTCTCCTAAAAGCGTCCAGCCGTCGAAGCGCCC
ACGCGACGAGGGTAGCCCCGTGCGTGGAAAGCGCAGCAGAGGGCAAAACG
GCAGCATCTCTCATGCCCGCGACACCTCCTTCGCTTACGTCTCTCCAGCC
GCACTGGACAGCGGCGCCGACTTCGAGCCTACGACACCACCTCCCCTGTG
CGAGTCGCCCTCAAAGATCAATCAGACTCCTAGCTCGTTCGCGCCGTTCT
CAGGAGGAGCAGCGGCGGCAAACCTGAGCTGTCGCCTCCGCCACCGATGC
TGTTCCCCGGCGCCCGGCCCCGCTGCTACCACCCCTGCTTGTGCTGCTCT
TGCGAGACGACAAGGTCGCGTGCCGCCGCACGTAGCCCCGCCTTCCCTTG
GCGCCACGGACCCCATCTTCCACGCTGCGCTGCTCCGGCTGCTGCACGGG
AGGAACGGCGAGCACTGCCCCGAGGCCGTCGGTTGGCGCTGGAGAGGCGA
CACGCCGGCACGCTTCGACCACTGGCCTTGCGCCTTACATCCGGTTGTAA
TGGACCTCCTTGCGTGCGTATCAGCCGGTGAGGAACAGGTCGTCAAGACC
GGTTGCGACAAGAAGCACACCACTGGCGGCAGCGGCGGCGGCGGCGGCGA
TTGCTGCAGGGGAGACGACAAGCTTGCGCCCGCGCCGAGAGAGGCCGCTT
GGCGGGCGCCTCGGCCGCGCACCCCCTCGGCGTACCGGGGAGCGCCGGCG
ACGGCAACGGAGGGAACGGTAGCGGTGGCCACAACGCCAACCGCCGCGCC
GTCGTCGTCTTTCGCGTTGGGTCAGACGCCACTGTCGGCCCTACGCAGGC
CCGGGAGCTCTTGTCGATTGTCCAGTAAAAACCGTGTGCGCTTCTCAACC
CACGACATGAGCGTTGTGGACACGCCGGACCCCCAGCGGGGGGGCTCTGA
AGAGGGGATGATCAGCGCGCTCGGCGGGCTCGAGTCCATTTTGTCTGCCG
CAGAGAGGGTCCGAGAGCTCGCGGCAGCCGCTCCCCGGCAGCACGGCGGT
CGCCAACAGTATGAGGGCTACTTCGATCGCTTCAGCGCCGCCGGTGGTGA
TCCGACTGACGGTGGTGTTGGCGACGGAACTGCGACAGCGGACGAACAGG
CCGCCGTGGCAGAACCCACGGTTAGAAGCAAGGCACCTGCCACTGTTGAT
AGAGTTAGTATTCGATCGGCGGCGGCGGCAGCGGCGGTGGCGGACGACAA
CGACGGTAGTGGTAGTGGTGAAATAGGTGAAGACGAGGGATCGGCGAAAG
CTGCAGCAGTGGTGGCAACGGAAAAAGAGGAAGATGTCGATGACTACCTC
ACGAGGGAGGCGAAAAGCGTTCGCGACGACTCGGCGGCCTTCGTGGCTGT
TCTGGAAGAAATAGCCTCCAGCGACTCTGCACCGGGAGAGATCGCGTTGG
CAGGGGGGTGGGGGCCTGAGCACAGCAACGCTGCCGCTTTCTACGCGAAA
GAGCTGGTGCTGCTCTGCGGGACCAAGACCGGGGATCAAGCAGATACGGT
GCCTCCGTCCGCCGCCGTGGCGGGTGCTGGCGTCGGGAGCCACCTTCGTG
TGCGCTATTTAGATGTCCTTAGCTGCCTCGTGCGTTACAACCTCAAGGTG
CGCCCTTTCTCATGCGATTTACGTCTGCGTCACTCTTGTGAACACATGAA
TCGCCGGTAGGTGAGCTTAATCATGGGGCGATGATGCCGGAATGCGCGTG
ATTGTTATTGTGGCTTTTGTGCAACAGCAGTGAGACTGTACAACGTTGCC
ACACAAGTTCACTAGCCGTGAGGAACTGAGTGGCATACCACGCGGGTAAG
AATCGCGTTGCGGTTTAAAAAACAACCGGGGTTGGGCTTGTGTTCAGAAA
AAGCAGGGCGCAGAAATATTCCGGATTGGGGGGTGTTTCGCGTTACATCA
ATAGGGCGGTGTTGTGCTTTCTCAACCGTTCGCAACAGAAGAGGGAGCCG
CTTGCTTTTCAAGGACGTGAGAAGGTGGGGTTCTCTTTTTTGTGTTCACA
CCAAGTCTCGCGTGTTTGGCAGGTTACTGATACCGCGTGCGTGCCCTCCT
CTTCACGTCATCAAGTCTGCCGTCTGAGACGAGCCTTACCGTTGGCACCA
CCGCTTCTTTGTGTGTGTCTTTCGCGCTTTTTTGGCCAGGTTGAACGTCG
TTTTCTGCGTGTTCTACTGCCGCGTTGTATCGTTGAAGCTTGCGCATTAT
TTGTTGTCCTAAATGCATCTCAGCAACATTGAGAAAGAGTCCACCGTATG
ACGCGAATGCAAAACATGTTTTTTTTCACAGTTTGTAAATTCACCCGATA
ACAGAAGTTAACCGAAGACCACCAAACCCTCCCCTTATTGGGCACAATGA
ACTGAATCGACGACGATATATCTACATTTAACCGGGGACCTTGTGCTGGT
ACGCAAACGTCCACGTCGACGCTCAGACTCTCACGTACTTCCCCGCCCTG
CCCGGCCTGCTCCCGTCTTCCCCCTCCCCGCCCTTCCCGCTGCTGGTGTC
GCGTCATGTCCTGGCAACACAGCTCCTCCTCAATGTCTGTCAGTGTGAGC
CACAGGAGGAGCAGGGAGACGCCGCTGTGGATGACGAAAGCTGTGACGAG
CAGCAGGACGAGGAGCCAGCGGCAGCCGACGCCAACGAGGGGGAGGAAGA
CGAAGACGACGACGACGACGATGACGATGACAGCGACGGGGGGGTCAGCG
ATGAAGGCGAAAAAGCCGCCTCAGACCCCACCGCAAACCTGCCGCCGTCG
CCTGCATCGACCGCCGGCACCGCCGGCACCGCCCTCACCGTCATCGTGCC
CGGTCGCGCCGCCCTGCTCCGGGAACAGGGTCTTCTCGACGCTGCCTGGG
GTTCGTCCGTGACCGCGCAGGCCGAGGGGGGCGTGTGCGGCTGCGTCTCG
GTGCTTGACGACAAAGGAACGCTGGAGTTCAACACCGAAGACGTGGCGGC
GCTGCTCACCCTTGCTCTCGGCCGCGTTCACCCGTTTATGCCGCTCGCAG
CGCGGATCACGGCCGCGGCGGAGGAGGCCGGCTGGGACGGCGGCGCCGGC
GAGGAAGAGGACGGAGACGATGATACCCTTGACGCGAGGGTGTGGGCTGC
TGTTCAGCAGTACACGCTAGAGTGCCGCGCTGCTACCGACGCTCGTACCT
CTTCGGCCGCCTATGCTACCGCTGCTATTGCTGGCACGCCACCTCCGGCC
CACCTGTTCTCCTCGCCTGTTTCTTCTGAGGCCATGCCGCCACCGCCTCG
TGTTGCTTTATCGTCAAGGAAAGCGGGCAGACCGGCGGCGGTTGACGATG
CCGCTTCTCCTGGCGCCGGTTCCTCCGCGGAAGAGGGAGAGGAGAGAGAG
GGTGGAGCCGAAGCGGAGGTGGCCGTCCCCGTCGCTGTACCCGGCAATCC
AACCACCACCGCCGGGCTCCTGGAGGGAGTTCCGGAGGGAGAGGGTTCTA
CAGCGGCATCGGCGGTGGTGGCAGAGGTACAGCTCACGGTGGACGAGGCC
GCAGACCTGCTAGAGTTTGTGGCCGCTGCGCGGTTCATCGCCCAGATTTT
CGCGGAACCGGTGGTCGCAGCGGGCGTTTCGGCGGGGCGTTGGTCGTGCG
CGATGCGCCTCGCCGAGCAAGTGCGTAAGCTTGCCGAGGAAGAGCAGCAG
GCCCAGCAGGTCGCCCCGACAGCGGCGCCAACGTCGTCTCTTAACAACAT
GCTTTGCCTGGGGGCGCTGGCGGACGTACAAGGGCTGGGATTGGTCATGG
CGCAACAGGCCAGGTACGCCCCCGCCCTGGAGGCGGTGCTGAAGAGGGAG
CTCCGGCAGGCGCTGAGGCGCGGACAGGGCCTGAAGAGGCGGATCAGACA
CCGCCTGCAGATAGGCGCTCCTGACGTTTTTTCTTTCCCAATGATCATGC
CTGCGTGCCAGCTAGCCAACCACGTGTGAACGAGTACCGCCGCCGCTGCT
GCCGCTGCCGCGGGTATCAAAACATGGACACCTCCGAACGTGGAATAGCT
TCGCGCGGTGTGAAATGTACGACTGTGTTGTTGGGGGCTTGAGCATGGGG
GAGGGGGTCCGTCTTGTCGGTAGGGTTGGTCTTTCGCTGCCGTTGTTTTG
TCCCGCGCAAGGGCTCGGGTCGGGATGAACGCGGCACCAGATTCGCTGTG
GATATGATACGTCGAACGCCAGGCTCCACTTGCCTGAATTCCGGCACCTG
CCTCATCGGTGCAGCAGCGGGCGCAGAAGTCTGCACTTTTGATCTCTTGG
ACCAATTCCGAGGGGCAGCATGAATGACCGGGGGAGGAGTGCACTGTGAT
GGGTGTGGCCGCCGCTTACAGCGGGAGGACTGCTGCTAGCGCTAGCCGGA
GGGAGGTGGATAGATGGTTAGTGACATGAAGTGAAGTGAATCGATGTCTG
TGTTTGATGGAAGTCAAAAGGAAGCTATGTTGCTTTTTGTCGTCCACGGC
TCCATCCATGACTTGCTATCGTTGAAACGTTTATGCATGGTGTTGATCGG
ATGATCGGATGACCTCGTGGGGTATCCTTTGCGAGAGCTCAAGAGACACC
AAATTATTTTATTTTTCTGTTCCACATTTCAGTTGTTGCGTTTGGAATCT
GCTGGGGCTTTTTGTATGTTTCGTTTGTGTCTCGTTGTGCCCCTGCGTGG
GTTCTGCCCGAAGATCAACACAGCCGGGCTGTCATACGCCATGGTAGCGA
AGTAACTTTCTCGCGTCGGTGCCGCTCACATGGCAGCGGTGTGCAGTAAT
TTATTATCGCGTATTGTCTCCCTTTGCAACGCCGAAGAAAATTGCGCGTA
AGATGTGTGTGTGTGTGTGTTTTTTTTTCGGGTTGGGACTCTTTGTTGTG
TATAGTAGTACAGGACAAGACAGGACAGGACACAATTCAGTTGATAGAAT
GAGAAGGATTGGGTGTGCCCCACCCTAATTTCCCTCCACGCATCCCCCGG
AATTCAATTCCCGTCGCCGACCCTTTCATCCAGTTTTACGGAAGTGGAGG
AAACGCCCCGATTGGAATTTGAAAAGCGGGTAGAACAAGAGCAAAATGTG
TCGTTTCGCACCCTTTTCACCACGCGTGTTTATTTCGTTACAAGCTCGTT
AGTGAGCGAGGGGTCTTGTTTGACGGTATGAAACACGAACATACACGTCC
GCTTTTTTTTGGGGACGGTGTTTCGTTGTGTGTTTTTGATTTTTCGCGGT
TCCGTTCTGACGATATACGATATGCCACACCAAATATATGTCTGTGGGCG
TGCGTGCGCCTTTGTGTGTGTGTTGACGTGTGTGTTGTTGCGTTGGATGT
GTCCGTTGGTTTCCGTTCGTGTGTGACCATGTATGGGTGTGCATGTATGT
GTGACGACTGCTGTGTGCGTGTTTGTGACTTGTGCGATAAGGCTAGGCGG
GCAACTACCGTTCGGGGAGGTGGAGCAGGGATTGATTCCGCTGCTACTGC
TACTGCTGCTTTGTTTTGTGCTTGTTTTTTTTAGATGCGCCCGCTCCCGC
TTCCGCTCCGACTCGGCCGCGTTGAAAAAAACAACAGGTGCAAGTGTCAA
CTGCTATTTGCTTTTTTGTCGAATTGGATAAAGGAGGGAGTAAACGAAAA
ACAAATGCGTTGCGCCCACAGCAGTGCTGCTGTTGGGCGCGCCTAGAGAC
TACAGTATTAGGACGGGCGAGTTTAAATGTGCTTTAAAATGACTGGGGTT
GGGAGGACGAGGGATGATAATGTGGAGGGTATCATATGAGCGAACTTGGG
CCAACGACACGTGGACCAGTGAGCGCCACCCCCCCCCCTCGGTATAGACG
CACAGAGGTAAATAGAGAAGCACACTGGACCAGCAGCTTTTGAACAGTGA
TGTTTGATTGACAGAGGGAAACTACATTTAGACGGGTCTAGATCGATTTC
ACACCCTGGCTGGGAAAAACTGCAGGCAAAACTGCGGGCAGGTACAGGTA
ATCCCTACCTGTTGTGTCCCTGAATGCCTGCCACCGACTGTACGAGGTAT
ACACGACGCGTCTCCCGGCTGAAGTTCAGCCGGCTTGAGCCACTTGTTTA
TTGATGCCGAGTGTTTTCGAGCGCTAATTCCCGGTTCAAAAAGGAGGTGG
CGCGCTGATTCACCGTAGTGAGCAAATTACATCCAGGTGCTTGTCGCGGA
CGAAGATGGGTAGCGGCGAAGTGGTTACGAAGGACCGGCTCGGAAGAGCA
CGTTTTAGTGCTCTGGAGTTGAATTAGGTATTTTTCATCACTGAAAATTA
back to topCoding sequence (CDS) from alignment at P-littoralis_Contig693:1960..8359+ >mRNA_P-littoralis_Contig693.2.1 ID=mRNA_P-littoralis_Contig693.2.1|Name=mRNA_P-littoralis_Contig693.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3090bp|location=Sequence derived from alignment at P-littoralis_Contig693:1960..8359+ (Pylaiella littoralis U1_48)
ATGCCGGACATGGAGACCCCCCGGATTTCTTCGGGCATCTTGGAAGAGCA
GGGCTCTCCTAAAAGCGTCCAGCCGTCGAAGCGCCCACGCGACGAGGGTA
GCCCCGTGCGTGGAAAGCGCAGCAGAGGGCAAAACGGCAGCATCTCTCAT
GCCCGCGACACCTCCTTCGCTTACGTCTCTCCAGCCGCACTGGACAGCGG
CGCCGACTTCGAGCCTACGACACCACCTCCCCTGTGCGAGTCGCCCTCAA
AGATCAATCAGACTCCTAGCTCGTTCGCGCCGTTCTCAGGAGGAGCAGCG
GCGGCAAACCTGAGCTGTCGCCTCCGCCACCGATGCTGTTCCCCGGCGCC
CGGCCCCGCTGCTACCACCCCTGCTTGTGCTGCTCTTGCGAGACGACAAG
GTCGCGTGCCGCCGCACGTAGCCCCGCCTTCCCTTGGCGCCACGGACCCC
ATCTTCCACGCTGCGCTGCTCCGGCTGCTGCACGGGAGGAACGGCGAGCA
CTGCCCCGAGGCCGTCGGTTGGCGCTGGAGAGGCGACACGCCGGCACGCT
TCGACCACTGGCCTTGCGCCTTACATCCGGTTGTAATGGACCTCCTTGCG
TGCGTATCAGCCGGTGAGGAACAGGTCGTCAAGACCGGTTGCGACAAGAA
GCACACCACTGGCGGCAGCGGCGGCGGCGGCGGCGATTGCTGCAGGGGAG
ACGACAAGCTTGCGCCCGCGCCGAGAGAGGCCGCTTGGCGGGCGCCTCGG
CCGCGCACCCCCTCGGCGTACCGGGGAGCGCCGGCGACGGCAACGGAGGG
AACGGTAGCGGTGGCCACAACGCCAACCGCCGCGCCGTCGTCGTCTTTCG
CGTTGGGTCAGACGCCACTGTCGGCCCTACGCAGGCCCGGGAGCTCTTGT
CGATTGTCCAGTAAAAACCGTGTGCGCTTCTCAACCCACGACATGAGCGT
TGTGGACACGCCGGACCCCCAGCGGGGGGGCTCTGAAGAGGGGATGATCA
GCGCGCTCGGCGGGCTCGAGTCCATTTTGTCTGCCGCAGAGAGGGTCCGA
GAGCTCGCGGCAGCCGCTCCCCGGCAGCACGGCGGTCGCCAACAGTATGA
GGGCTACTTCGATCGCTTCAGCGCCGCCGGTGGTGATCCGACTGACGGTG
GTGTTGGCGACGGAACTGCGACAGCGGACGAACAGGCCGCCGTGGCAGAA
CCCACGGTTAGAAGCAAGGCACCTGCCACTGTTGATAGAGTTAGTATTCG
ATCGGCGGCGGCGGCAGCGGCGGTGGCGGACGACAACGACGGTAGTGGTA
GTGGTGAAATAGGTGAAGACGAGGGATCGGCGAAAGCTGCAGCAGTGGTG
GCAACGGAAAAAGAGGAAGATGTCGATGACTACCTCACGAGGGAGGCGAA
AAGCGTTCGCGACGACTCGGCGGCCTTCGTGGCTGTTCTGGAAGAAATAG
CCTCCAGCGACTCTGCACCGGGAGAGATCGCGTTGGCAGGGGGGTGGGGG
CCTGAGCACAGCAACGCTGCCGCTTTCTACGCGAAAGAGCTGGTGCTGCT
CTGCGGGACCAAGACCGGGGATCAAGCAGATACGGTGCCTCCGTCCGCCG
CCGTGGCGGGTGCTGGCGTCGGGAGCCACCTTCGTGTGCGCTATTTAGAT
GTCCTTAGCTGCCTCGTGCGTTACAACCTCAAGCTCCTCCTCAATGTCTG
TCAGTGTGAGCCACAGGAGGAGCAGGGAGACGCCGCTGTGGATGACGAAA
GCTGTGACGAGCAGCAGGACGAGGAGCCAGCGGCAGCCGACGCCAACGAG
GGGGAGGAAGACGAAGACGACGACGACGACGATGACGATGACAGCGACGG
GGGGGTCAGCGATGAAGGCGAAAAAGCCGCCTCAGACCCCACCGCAAACC
TGCCGCCGTCGCCTGCATCGACCGCCGGCACCGCCGGCACCGCCCTCACC
GTCATCGTGCCCGGTCGCGCCGCCCTGCTCCGGGAACAGGGTCTTCTCGA
CGCTGCCTGGGGTTCGTCCGTGACCGCGCAGGCCGAGGGGGGCGTGTGCG
GCTGCGTCTCGGTGCTTGACGACAAAGGAACGCTGGAGTTCAACACCGAA
GACGTGGCGGCGCTGCTCACCCTTGCTCTCGGCCGCGTTCACCCGTTTAT
GCCGCTCGCAGCGCGGATCACGGCCGCGGCGGAGGAGGCCGGCTGGGACG
GCGGCGCCGGCGAGGAAGAGGACGGAGACGATGATACCCTTGACGCGAGG
GTGTGGGCTGCTGTTCAGCAGTACACGCTAGAGTGCCGCGCTGCTACCGA
CGCTCGTACCTCTTCGGCCGCCTATGCTACCGCTGCTATTGCTGGCACGC
CACCTCCGGCCCACCTGTTCTCCTCGCCTGTTTCTTCTGAGGCCATGCCG
CCACCGCCTCGTGTTGCTTTATCGTCAAGGAAAGCGGGCAGACCGGCGGC
GGTTGACGATGCCGCTTCTCCTGGCGCCGGTTCCTCCGCGGAAGAGGGAG
AGGAGAGAGAGGGTGGAGCCGAAGCGGAGGTGGCCGTCCCCGTCGCTGTA
CCCGGCAATCCAACCACCACCGCCGGGCTCCTGGAGGGAGTTCCGGAGGG
AGAGGGTTCTACAGCGGCATCGGCGGTGGTGGCAGAGGTACAGCTCACGG
TGGACGAGGCCGCAGACCTGCTAGAGTTTGTGGCCGCTGCGCGGTTCATC
GCCCAGATTTTCGCGGAACCGGTGGTCGCAGCGGGCGTTTCGGCGGGGCG
TTGGTCGTGCGCGATGCGCCTCGCCGAGCAAGTGCGTAAGCTTGCCGAGG
AAGAGCAGCAGGCCCAGCAGGTCGCCCCGACAGCGGCGCCAACGTCGTCT
CTTAACAACATGCTTTGCCTGGGGGCGCTGGCGGACGTACAAGGGCTGGG
ATTGGTCATGGCGCAACAGGCCAGGTACGCCCCCGCCCTGGAGGCGGTGC
TGAAGAGGGAGCTCCGGCAGGCGCTGAGGCGCGGACAGGGCCTGAAGAGG
CGGATCAGACACCGCCTGCAGATAGGCGCTCCTGACGTTTTTTCTTTCCC
AATGATCATGCCTGCGTGCCAGCTAGCCAACCACGTGTGA back to top
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