prot_P-littoralis_Contig693.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig693.18.1
Unique Nameprot_P-littoralis_Contig693.18.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length455
Homology
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BLAST of mRNA_P-littoralis_Contig693.18.1 vs. uniprot
Match: D8LQ87_ECTSI (Contains similarity to extensin (AtExt1) from Arabidopsis thaliana n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ87_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 1.100e-50
Identity = 101/140 (72.14%), Postives = 122/140 (87.14%), Query Frame = 0 
Query:  304 LAGKKRERGLTVEGASKRAREMQLRDFMVAVGEYGSTVPGEATRYHLQKGGMVASNSQIVTLMSLAADHLVANIVHESSLYRHLRLQRPGEQAREDAELGGEDGQMLTDEDLSMSLVKRGILIADSGVLTRRAGPAAVAA 443
            LAGK R RG     A+KRA+EMQLRDFM+AV EYGSTVPGEATR+HLQ+GG+  SNSQIVTLMSLAADHLVA+IVHESS++R++RLQ+  EQ RE AEL GE+GQMLT+EDLS+SL+ RGI+++DSG+L + AGPAAVAA
Sbjct:  300 LAGK-RPRGSMAASANKRAKEMQLRDFMLAVDEYGSTVPGEATRFHLQRGGLTTSNSQIVTLMSLAADHLVASIVHESSIFRNVRLQQAREQGREAAELLGEEGQMLTNEDLSLSLLSRGIVVSDSGLLVKAAGPAAVAA 438
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BLAST of mRNA_P-littoralis_Contig693.18.1 vs. uniprot
Match: A0A6H5L6F2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F2_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 9.080e-50
Identity = 100/140 (71.43%), Postives = 122/140 (87.14%), Query Frame = 0 
Query:  304 LAGKKRERGLTVEGASKRAREMQLRDFMVAVGEYGSTVPGEATRYHLQKGGMVASNSQIVTLMSLAADHLVANIVHESSLYRHLRLQRPGEQAREDAELGGEDGQMLTDEDLSMSLVKRGILIADSGVLTRRAGPAAVAA 443
            LAGK R RG     A+KRA+EMQLRDF++AV EYGSTVPGEATR+HLQ+GG+  SNSQIVTLMSLAADHLVA+IVHESS++R++RLQ+  EQ RE AEL GE+GQMLT+EDLS+SL+ RGI+++DSG+L + AGPAAVAA
Sbjct:  337 LAGK-RPRGSMAASANKRAKEMQLRDFILAVDEYGSTVPGEATRFHLQRGGLTTSNSQIVTLMSLAADHLVASIVHESSIFRNVRLQQAREQGREAAELLGEEGQMLTNEDLSLSLLSRGIVVSDSGLLVKAAGPAAVAA 475
[Close]
BLAST of mRNA_P-littoralis_Contig693.18.1 vs. uniprot
Match: A0A4D9D766_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D766_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 7.230e-7
Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 0 
Query:  326 QLRDFMVAVGEYGSTVPGEATRYHLQKGGMVASNSQIVTLMSLAADHLVANIVHESSLYRHLRLQRPGEQAREDAELGGEDGQMLTDEDLSMSLVKRGI 424
            +L  F+ A+ +Y  T+P E T Y LQ+GG+  ++S+I  L+SLAA+ LV+ IVH+++ Y  ++ Q               DG +L  EDL  SL K G+
Sbjct:   87 ELAPFLNALDQYHPTIPEEVTAYFLQQGGVTVTDSKIKKLVSLAAEKLVSEIVHDTTTYSRMKDQ---------------DGDILKMEDLRESLGKYGV 170
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig693.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQ87_ECTSI1.100e-5072.14Contains similarity to extensin (AtExt1) from Arab... [more]
A0A6H5L6F2_9PHAE9.080e-5071.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9D766_9STRA7.230e-737.37Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig693contigP-littoralis_Contig693:36812..40594 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig693.18.1mRNA_P-littoralis_Contig693.18.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig693 36553..41245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig693.18.1 ID=prot_P-littoralis_Contig693.18.1|Name=mRNA_P-littoralis_Contig693.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=455bp
MEQPGRLPSAGQQQQAQQQAQQQQQQQQQSMLQEGQQQSSMEGAPPGLGN
TGTVVHQAAVAAAVAAAAATGQQPQQGLESIAEGEAPPRNITSPIPPPIP
KGATPPGPSGMLSPPLPVTATTPGVVPQTAGMLRGSLQSYNGGVAGYGLG
VGGSSAATAAAATGQPPSSSVAAAALPGLPGLVPSPASAVGGAAAASQTA
AMNQVQGAAAGAAAAGAAAVGATTATPAGAKPAAPAPTPAPAPAPAPAPT
PAVPAPAATPAPAPTPEPAPTPATVAPAPDVPGPAAAAAAAGQEPAVTKS
EKGLAGKKRERGLTVEGASKRAREMQLRDFMVAVGEYGSTVPGEATRYHL
QKGGMVASNSQIVTLMSLAADHLVANIVHESSLYRHLRLQRPGEQAREDA
ELGGEDGQMLTDEDLSMSLVKRGILIADSGVLTRRAGPAAVAAEAAAAAE
AEEG*
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