mRNA_P-littoralis_Contig692.8.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig692.8.2 vs. uniprot
Match: A0A6H5KLB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLB5_9PHAE) HSP 1 Score: 365 bits (936), Expect = 1.800e-103 Identity = 233/401 (58.10%), Postives = 252/401 (62.84%), Query Frame = 1
Query: 1579 SEPSEGPPRLLSESEESDGGGGEQ---------DGRGRGHHQAAAGRSWSTGFLRGAIDSVDE----EEFKEXXXXXXXXXXXXXXXXXXXXXXXXXXFFVGQWLDVKDTVNNWLEATVMDMTSCGSSLRIHYNGWPPRWDEWLNWDSPRIAPFRTRTQHLPQAQHVSPAPVSAVRNAPRTGPLVDDVRVLMPEVQRVLQEIGPMVDELSTCYAQHLERDPSTSPTDGRAVSHTLPWTRQRVQSHQQ---QATERQEHTTGVGGXXSSSCAKAADLAGDVAPLFDRLGRMLTDVAPHLARLSA-RGDERPPAAGAS----AAAQGEDASEPGELPMWGSVDLAAMGGVQ------QRSSRGSGAGGGGXXXXXXXXXXXXVASPEGTTSAFRQLVSTSSPA 2700
SE SEGPPRL S+SE+ G G H A + R W+ GFLRG+ ++ EE KE F+VGQWLDVKDTVNNWLEATVMDMTS GS L+IHYNGWPPRWDEWL+WDSPRIAPFRTRTQHLPQAQHVSPAPVSAVRNAPRTGPLVDDVRV+MPEV RVLQEI PMVDELS CYAQ LE DPSTSPT GRAVSHTLPW RQRVQ QQ A GG KAADLA D+APLFDRLGRMLTDVAPHLARLSA D PA+ A A+GED +EPGEL W ++ L A GG Q +RSSR S +A P SAFRQLVSTSSPA
Sbjct: 309 SEVSEGPPRLQSDSEDXXXXXXXXXXXXXXXXXQGGNWGDHGAISRRGWTRGFLRGSRRGMEGGGGGEECKEDGSSASDRRWQLRRR-----------FYVGQWLDVKDTVNNWLEATVMDMTSSGSRLQIHYNGWPPRWDEWLSWDSPRIAPFRTRTQHLPQAQHVSPAPVSAVRNAPRTGPLVDDVRVVMPEVSRVLQEIVPMVDELSACYAQQLELDPSTSPTGGRAVSHTLPWARQRVQLRQQGRAAAPAXXXXXXXAGGVCRG--VKAADLAADIAPLFDRLGRMLTDVAPHLARLSAMEEDTTVPASXXXXXXXAGAEGEDVAEPGEL-SWEALGLRADGGQQGGGSGARRSSRDS----------PPRGRREALAYPA-NASAFRQLVSTSSPA 684
BLAST of mRNA_P-littoralis_Contig692.8.2 vs. uniprot
Match: A0A7S2W609_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W609_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.710e-40 Identity = 99/221 (44.80%), Postives = 128/221 (57.92%), Query Frame = 1
Query: 1834 FFVGQWLDVKDTVNNWLEATVMDMTSCGSSLRIHYNGWPPRWDEWLNWDSPRIAPFRTRTQHLPQAQHVSPAPVSAVRNAPRTGPLVDDVRVLMPEVQRVLQEIGPMVDELSTCYAQHLERDPSTSPTDGRAVSHT----LPWTRQRVQSHQQ-----QATERQEHTTGVGGXXSSSCAKAADLAGDVAPLFDRLGRMLTDVAPHLARLSARGDERPPAAG 2469
FF+GQWLD KDTVN WLEATVMD+ + + IHYNGWP RWDEW+ S RIAPFRTRT H A VSP+PVS V +APRTG +D+R+++PEV +L + P+VD+L LE + + +T LPW R V S Q A E + +S + A L G +APL DR+GR++ D+APHL LS+ G P + G
Sbjct: 244 FFIGQWLDAKDTVNQWLEATVMDINLERTQVLIHYNGWPTRWDEWIECSSQRIAPFRTRTLHPSHAPFVSPSPVSFVPDAPRTGD--EDIRIILPEVTSMLTRLRPLVDQLQALSDAQLELESHDLGSQPSRQHNTRPDLLPWQRNGVCSGGQLQSSGDAAEDSGRMRALRASETSRKEEIAHLGGRLAPLMDRMGRLIADLAPHLQDLSSSGGNLPSSEG 462
BLAST of mRNA_P-littoralis_Contig692.8.2 vs. uniprot
Match: A0A662Y4R8_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4R8_9STRA) HSP 1 Score: 147 bits (370), Expect = 8.260e-32 Identity = 87/200 (43.50%), Postives = 116/200 (58.00%), Query Frame = 1
Query: 1834 FFVGQWLDVKDTVNNWLEATVMDMTSCGSSLRIHYNGWPPRWDEWLNWDSPRIAPFRTRTQHLPQAQHVSPAPVSAVRNAPRTGPLVDDVRVLMPEVQRVLQEIGPMVDELSTC--------YAQHLERDPSTSPTDGRAVSHTLPWTRQRVQSHQQQATERQEHTTGVGGXXSSSCAKAADLAGDVAPLFDRLGRMLTD 2409
FFVGQWLDVKDTVN WLE+TVMD+ + +HY+GWP RWDEW+ +DS RIA FRTRT H Q +SPAP + V +APR G +DVR ++ +V+ ++ E+ P +D L+ AQH E+ +PTD + ++S Q +A E E T G ++ A L VAPLFDR GR+L D
Sbjct: 383 FFVGQWLDVKDTVNQWLESTVMDIAD--GKVLVHYHGWPTRWDEWIEFDSDRIAAFRTRTLHTQDTQRMSPAPTTRVPSAPRVGD--NDVRQMVIDVRNLMHEMMPHIDRLADLCEESQARTQAQHEEQQGEATPTD------------RPLESAQPEAEEA-ETTASTGQTPDDEVSEMAHL---VAPLFDRFGRLLMD 562
BLAST of mRNA_P-littoralis_Contig692.8.2 vs. uniprot
Match: A0A7S1UE69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE69_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.560e-31 Identity = 92/263 (34.98%), Postives = 127/263 (48.29%), Query Frame = 1
Query: 1834 FFVGQWLDVKDTVNNWLEATVMDMTSCGSSLRIHYNGWPPRWDEWLNWDSPRIAPFRTRTQHLPQAQHVSPAPVSAVRNAPRTGPLVDDVRVLMPEVQRVLQEIGPMVDELSTCYAQHLERDP--------------STSPTDGRA------VSHTLPWTRQRVQSHQQQATERQEHTT-----------------GVGGXXSSSCAKAAD----------------------------LAGDVAPLFDRLGRMLTDVAPHLA 2427
FFVGQWLDVKDTVN WLEAT+MD+ + +++ +HYNGWP RWDEW++ DSPR+APFRTRT H A HVSP+P + V NAP TG +D+R ++PE+ VL P++ LS LE + + P RA ++ +PW Q+ + + R+ H G G + K+ D +A + PL DRLGR + D+APH+A
Sbjct: 183 FFVGQWLDVKDTVNQWLEATIMDVRA--NAVYVHYNGWPTRWDEWIDADSPRLAPFRTRTLHSTTAPHVSPSPNNRVSNAPVTGG--EDLRAVIPELYNVLMRCAPVLGALSELCEADLEDEALNGAVASARGSDAQGSDPAGRRALLSRQRIAPGMPWEAQQARETRVANRRRKRHKPSQPRGSRSAWSADDDDLGFGSANEEAKEKSFDANSPGAAEEAQSEQRLSGVRRRRQHVNNIARQLGPLLDRLGRAMADLAPHVA 441
BLAST of mRNA_P-littoralis_Contig692.8.2 vs. uniprot
Match: A0A0P1B6K0_PLAHL (Ubiquitin-like protein, regulator of apoptosis n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B6K0_PLAHL) HSP 1 Score: 144 bits (364), Expect = 2.620e-31 Identity = 86/197 (43.65%), Postives = 110/197 (55.84%), Query Frame = 1
Query: 1834 FFVGQWLDVKDTVNNWLEATVMDMTSCGSSLRIHYNGWPPRWDEWLNWDSPRIAPFRTRTQHLPQAQHVSPAPVSAVRNAPRTGPLVDDVRVLMPEVQRVLQEIGPMVDELSTCYAQHLERDPSTSPTDGRAVSHTLPWTRQRVQSHQQQATERQEHTTGVGGXXSSSCAKAADLAGDVAPLFDRLGRMLTDVAPHL 2424
FFVGQWLDVKDTVN WLE+TVMD+ + IHY+GWP RWDEW++ DS RIA FRTRT H AQ +SP P + V +APR G +DVR L+ V+ ++ E+ P ++ L+ + L+RD S + S TL G S ++ A L VAPLFDR GR+L D A HL
Sbjct: 271 FFVGQWLDVKDTVNQWLESTVMDIAD--GKILIHYHGWPTRWDEWIDVDSDRIAAFRTRTLHTHNAQRMSPVPTTRVPSAPRVGD--NDVRQLVINVRNLMGEMMPHINRLAVLCEEDLQRDQIPSVDSVPSASTTL-------------------------GARESEVSEVAHL---VAPLFDRFGRLLIDSANHL 435
BLAST of mRNA_P-littoralis_Contig692.8.2 vs. uniprot
Match: G5ABL1_PHYSP (Ubiquitin-like domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5ABL1_PHYSP) HSP 1 Score: 144 bits (363), Expect = 4.320e-31 Identity = 89/201 (44.28%), Postives = 118/201 (58.71%), Query Frame = 1
Query: 1834 FFVGQWLDVKDTVNNWLEATVMDMTSCGSSLRIHYNGWPPRWDEWLNWDSPRIAPFRTRTQHLPQAQHVSPAPVSAVRNAPRTGPLVDDVRVLMPEVQRVLQEIGPMVDELSTCYAQHLERD-----PSTSPTDGRAVSHTLPWTRQRVQSHQQQATER--QEHTTGVGGXXSSSCAKAADLAGDVAPLFDRLGRMLTDVA 2415
FFVGQWLDVKDTVN WLE+TVMD+ + IHY+GWP RWDEW+++DS RIA FRTRT H Q +SP P + V +APR G +DVR ++ +V+ +++E+ P +D L+ L R+ P +P D AVS QATE T+ GG S + +++A VAPLFDR GR+L D A
Sbjct: 308 FFVGQWLDVKDTVNQWLESTVMDIAD--GKVLIHYHGWPARWDEWIDFDSDRIAAFRTRTLHTQNMQRMSPVPTTRVPSAPRVGD--NDVRRMVVDVRNLMREMMPHIDRLTELCEDDLRREREQNQPPLNPVDD-AVSGA-------------QATETGLPTETSQAGGESRES--EVSEVAHLVAPLFDRFGRLLMDSA 488
BLAST of mRNA_P-littoralis_Contig692.8.2 vs. uniprot
Match: A0A7S2GR18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GR18_9STRA) HSP 1 Score: 140 bits (354), Expect = 4.730e-31 Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 1
Query: 1834 FFVGQWLDVKDTVNNWLEATVMDMTSCGSSLRIHYNGWPPRWDEWLNWDSPRIAPFRTRTQHLPQAQHVSPAPVSAVRNAPRTGPLVDDVRVLMPEVQRVLQEIGPMVDELSTCYAQHLERD 2199
FF GQWLD KDTVN WLEATVMD+ + + + IHYNGWP RWDEW+ + S RIAPFR+RT H + VSP+PVS V NAP TG +DVR+++PEV R++ + P++ +L + LE D
Sbjct: 300 FFTGQWLDAKDTVNQWLEATVMDVNAERAEILIHYNGWPTRWDEWMPFKSGRIAPFRSRTVHSVHSPFVSPSPVSVVANAPSTGD--EDVRIVLPEVNRMMLRVTPIMQQLQWLCDEQLELD 419
BLAST of mRNA_P-littoralis_Contig692.8.2 vs. uniprot
Match: UPI001ED09905 (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=UPI001ED09905) HSP 1 Score: 140 bits (352), Expect = 5.210e-31 Identity = 80/198 (40.40%), Postives = 113/198 (57.07%), Query Frame = 1
Query: 1834 FFVGQWLDVKDTVNNWLEATVMDMTSCGSSLRIHYNGWPPRWDEWLNWDSPRIAPFRTRTQHLPQAQHVSPAPVSAVRNAPRTGPLVDDVRVLMPEVQRVLQEIGPMVDELSTCYAQHLERDPSTSPTDGR-AVSHTLPWTRQRVQSHQQQATERQEHTTGVGGXXSSSCAKAADLAGDVAPLFDRLGRMLTDVAPHL 2424
FFVGQWLDVKDTVN WLE+TVMD+ G + +HY+GWP RWDEW+++DS RIA FRTRT H Q +SP P + V +AP+ G +DVR ++ +V+ +++E+ P +D L+ L R+ T+ AVS V +Q + + +++A VAPLFDR GR+L D +L
Sbjct: 273 FFVGQWLDVKDTVNQWLESTVMDIA--GGKVLVHYHGWPTRWDEWIDFDSDRIATFRTRTLHTQSTQRMSPVPTTRVPSAPQVGD--NDVRRMVVDVRNLMREMMPHIDRLADLCEDDLRREQMTNQAQSNEAVS---------VGESSEQTINFDAPNQSTPVVPETRDNEVSEMAHLVAPLFDRFGRLLMDSVRYL 457
BLAST of mRNA_P-littoralis_Contig692.8.2 vs. uniprot
Match: A0A3F2RMJ4_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RMJ4_9STRA) HSP 1 Score: 140 bits (352), Expect = 8.160e-31 Identity = 80/198 (40.40%), Postives = 113/198 (57.07%), Query Frame = 1
Query: 1834 FFVGQWLDVKDTVNNWLEATVMDMTSCGSSLRIHYNGWPPRWDEWLNWDSPRIAPFRTRTQHLPQAQHVSPAPVSAVRNAPRTGPLVDDVRVLMPEVQRVLQEIGPMVDELSTCYAQHLERDPSTSPTDGR-AVSHTLPWTRQRVQSHQQQATERQEHTTGVGGXXSSSCAKAADLAGDVAPLFDRLGRMLTDVAPHL 2424
FFVGQWLDVKDTVN WLE+TVMD+ G + +HY+GWP RWDEW+++DS RIA FRTRT H Q +SP P + V +AP+ G +DVR ++ +V+ +++E+ P +D L+ L R+ T+ AVS V +Q + + +++A VAPLFDR GR+L D +L
Sbjct: 225 FFVGQWLDVKDTVNQWLESTVMDIA--GGKVLVHYHGWPTRWDEWIDFDSDRIATFRTRTLHTQSTQRMSPVPTTRVPSAPQVGD--NDVRRMVVDVRNLMREMMPHIDRLADLCEDDLRREQMTNQAQSNEAVS---------VGESSEQTINFDAPNQSTPVVPETRDNEVSEMAHLVAPLFDRFGRLLMDSVRYL 409
BLAST of mRNA_P-littoralis_Contig692.8.2 vs. uniprot
Match: A0A225WVE6_9STRA (Ubiquitin family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVE6_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.740e-30 Identity = 79/194 (40.72%), Postives = 110/194 (56.70%), Query Frame = 1
Query: 1834 FFVGQWLDVKDTVNNWLEATVMDMTSCGSSLRIHYNGWPPRWDEWLNWDSPRIAPFRTRTQHLPQAQHVSPAPVSAVRNAPRTGPLVDDVRVLMPEVQRVLQEIGPMVDELSTCYAQHLERDPSTSPTDGRAVSHTLPWTRQRVQSHQQQATERQEHTTGVGGXXSSSCAKAADLAGDVAPLFDRLGRMLTDVA 2415
FF+GQWLDVKDTVN WLE+TVMD+ + IHY+GWP RWDEW++++S RIA FRTRT H Q +SP P + V +APR G +DVR ++ +V+ +++E+ P +D L+ + L RD T + + + P T G S ++ + L VAPLFDR GR+L D A
Sbjct: 180 FFIGQWLDVKDTVNQWLESTVMDIAD--GKVLIHYHGWPARWDEWIDFESDRIAAFRTRTLHTQNVQRLSPTPTTRVPSAPRVGD--NDVRRMVVDVRNLMREMMPHIDRLADLCEEDLTRDQDHERTSVESEAESEPRT--------------------AGESRESQVSEVSHL---VAPLFDRFGRLLVDSA 346 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig692.8.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig692.8.2 >prot_P-littoralis_Contig692.8.2 ID=prot_P-littoralis_Contig692.8.2|Name=mRNA_P-littoralis_Contig692.8.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1142bp MAEDTGRSTPRAGSLPPPPPPAAAAATPPAMDGPSADAAAAAAGSTEDTAback to top mRNA from alignment at P-littoralis_Contig692:56578..66592- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig692.8.2 ID=mRNA_P-littoralis_Contig692.8.2|Name=mRNA_P-littoralis_Contig692.8.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10015bp|location=Sequence derived from alignment at P-littoralis_Contig692:56578..66592- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig692:56578..66592- >mRNA_P-littoralis_Contig692.8.2 ID=mRNA_P-littoralis_Contig692.8.2|Name=mRNA_P-littoralis_Contig692.8.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3426bp|location=Sequence derived from alignment at P-littoralis_Contig692:56578..66592- (Pylaiella littoralis U1_48)back to top |