mRNA_P-littoralis_Contig690.41.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig690.41.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 247 bits (631), Expect = 1.300e-77 Identity = 130/240 (54.17%), Postives = 158/240 (65.83%), Query Frame = 1
Query: 7 SAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGAGAAGREGIPVDLKVRLKMTLRTKHNILENNIDGMCTSTKYSSFPLLYVTQLLSTHRHVRGAYLPSNRNVPRRSDGLLPQTGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKV*KDREYKLRKADGTEFTRKGCYLIVDNGY 726
SAWW +LQ+ +LA T+ AAKVFRERFRVP+ FF LV+LSR K+WFS G AA REGIP++LKV K L + + + + F ++ H YLP+ + G+ Q G TGA GSTDVTH+G MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT GF G TNDKT +RYD+ V IR +REYKLRK +GTE TR+GC+LIVDNGY
Sbjct: 74 SAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVLGKGNCFDDVEQLSKMSESIAQAL-FHKFCRHSAAEMFDEH-----IYLPTGTYLDEVM-GIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGY 306
BLAST of mRNA_P-littoralis_Contig690.41.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 220 bits (561), Expect = 3.880e-66 Identity = 137/350 (39.14%), Postives = 169/350 (48.29%), Query Frame = 1
Query: 7 SAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGAGAAGREGIPVDLKVRL----------------------------------------------------------------------KMTLRTKHNIL---------ENNIDGMCTSTKYSSFPLLYVTQLLST----------------------HRHVRG---------AYLPSNRNVPRRSDGLLPQTGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKV*KDREYKLRKADGTEFTRKGCYLIVDNGY 726
SAWW QLQ +L T++AAKVFR RFRVPHAFFL LV+++R KKWFS A GR GIP++LK+ + T R K L ++ G T+ +S +L Q+L H+ + YLP+ + + + G TGAIGSTDVTH+GWGMCPFTLGRS+TGKEGFPT+A++VTVDHAGRAI +T GFTGATNDKTI+RYDA V TI+ + R YKLR+ADGT RKGCY IVDNGY
Sbjct: 76 SAWWLQLQNADLLDHTTEAAKVFRTRFRVPHAFFLELVKMARGKKWFSVREKDAVGRRGIPIELKLSSYRSGLLLLVVNCSDVPSIEPMRWIVVHNFTRWYRRVHSSTAVVAEHGSMGNVPCTVTRTSHRWHRKYCCRRPTAREKRRTLWFRLHTFQTRGHLRGHATTFDAASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTG-SYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGY 424
BLAST of mRNA_P-littoralis_Contig690.41.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 216 bits (549), Expect = 2.640e-64 Identity = 117/245 (47.76%), Postives = 153/245 (62.45%), Query Frame = 1
Query: 10 AWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGAGAAGREGIPVDLKVRLKMTLRTKHNILEN--NIDGMCTSTKYSSFPLL---YVTQLLSTHRHVRGAYLPSNRNVPR-RSDGLLPQTGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKV*KDREYKLRKADGTEFTRKGCYLIVDNGY 726
AW L++E+L PTS AAK FRE FRVP+ FFLRLVEL ++K WF+ A GR PV+ KV +T+ + N+ + N+ M T T F + T++ H +LPS N R G + GF GA+GSTDVTH+GW CP+ GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TNDKTI+ D AV IR +K ++ + + K DGT T KGCYLIVDNGY
Sbjct: 64 AWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEH-----IFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY 303
BLAST of mRNA_P-littoralis_Contig690.41.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 213 bits (541), Expect = 1.090e-62 Identity = 108/248 (43.55%), Postives = 151/248 (60.89%), Query Frame = 1
Query: 7 SAWWTQLQEEELAVPTSDA---AKVFRERFRVPHAFFLRLVELSREKKWFSDGGAGAAGREGIPVDLKVRLKMTLRTKHNILENN-----IDGMCTSTKYSSFPLLYVTQLLSTHRHVRGAYLPSNRNVPRRSDGLLPQTGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKV*KDREYKLRKADGTEFTRKGCYLIVDNGY 726
S WW +L E T A+ FR FRVP+ FF+ LVEL R++ WF G + GR+ +PV+LKV + + ++ N+ + I ++ + F + +L + YLP+ ++ R+ + GF GA+GSTDVTH+ WGMCP+ R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV IR + V +++YKL DG +F KGCYL+VDNGY
Sbjct: 107 SGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEY-----VYLPTGEDL-RKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGY 348
BLAST of mRNA_P-littoralis_Contig690.41.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 209 bits (531), Expect = 2.370e-61 Identity = 109/249 (43.78%), Postives = 154/249 (61.85%), Query Frame = 1
Query: 7 SAWWTQLQE-EELAV-----PTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGAGAAGREGIPVDLKVRLKMTLRTKHNILENNIDGMCTSTKYSSFPLLYVTQLLSTHRHVRGAYLPSN---RNVPRRSDGLLPQTGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKV*KDREYKLRKADGTEFTRKGCYLIVDNGY 726
S W QLQE ++L V PTS A+ FRE FR+P+ FF+ LV L +++ WF G A+GR GIPV LKV + + + N + S + ++ T+ + + +LP+ + V + D L GF+GA GSTDVTH+ WGMCP+ RS+TGKEG+PT+A++VTVDH R + VT GFTG+TNDK+I+RYD AV IR + + ++E+ + +ADGT + KGCYL+VDNGY
Sbjct: 88 SGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRL----GFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGY 332
BLAST of mRNA_P-littoralis_Contig690.41.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 203 bits (516), Expect = 6.530e-60 Identity = 111/249 (44.58%), Postives = 153/249 (61.45%), Query Frame = 1
Query: 10 AWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGAGAAGREGIPVDLKVRLKMTLRTKHNILEN--NIDGMCTSTKYSSFPLL---YVTQLLSTHRHVRGAYLPSNRN-----VPRRSDGLLPQTGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKV*KDREYKLRKADGTEFTRKGCYLIVDNGY 726
AW L++++L S +K FR FRVP AFFLRLV L + K WF+ G AAGR+ PV+ KV +T+ + N + + M +T + F + + ++ H YLPS +N V ++ D L GF+GA+GS DVTH+ W CP+ L RS+TGKEG PT+ ++VTV+HAGRA VT+GFTG+TNDKTIV +DAAV+ IR +K ++ + + DGT T KGCYL+VDNGY
Sbjct: 62 AWARMLEDKDLEESNSRTSKQFRLDFRVPCAFFLRLVALVKSKNWFATAGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEH-----IYLPSEQNGELDHVMKQYDRL----GFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGY 301
BLAST of mRNA_P-littoralis_Contig690.41.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 196 bits (499), Expect = 1.500e-57 Identity = 106/249 (42.57%), Postives = 148/249 (59.44%), Query Frame = 1
Query: 10 AWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGAGAAGREGIPVDLKVRLKMTLRTKHNILENN-----IDGMCTSTKYSSFPLLYVTQLLSTHRHVRGAYLPSNRN-----VPRRSDGLLPQTGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKV*KDREYKLRKADGTEFTRKGCYLIVDNGY 726
AW L++++L S ++K FR FRVP +FFLRLV L + K WF+ G AA R+ PV+ KV +T+ + N + + T + F + ++ H YLPS +N V ++ D L GF+GA+GS DVTH+GW CP+ L RS+TGKEG PT+ ++VTV+HAGRAI VT+GFT +TNDKT V +DA V+ IR + ++ + + DGT T KGCYL+VDNGY
Sbjct: 35 AWAQMLEDKDLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEH-----IYLPSEQNGELDHVMKQYDRL----GFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGY 274
BLAST of mRNA_P-littoralis_Contig690.41.1 vs. uniprot
Match: A0A6H5KEF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF0_9PHAE) HSP 1 Score: 188 bits (477), Expect = 7.710e-56 Identity = 100/197 (50.76%), Postives = 121/197 (61.42%), Query Frame = 1
Query: 136 KKWFSDGGAGAAGREGIPVDLKVRLKMTLRTKHNILENNIDGMCTSTKYSSFPLLYVTQLLSTHRHVRGAYLPSNRNVPRRSDGLLPQTGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKV*KDREYKLRKADGTEFTRKGCYLIVDNGY 726
+KW G A REG P++LKV K L M +T + F + +++ G+ Q G+TGA GSTDVTH+ W MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT GFTGATNDKTI+RYD+ V IR +REYKLRKA+GTE TR+GC+LIVDNGY
Sbjct: 67 QKWI--GVPLPANREGTPLELKVLGKGNCFDDVEQLSKMSKSMAQAT-FHKFCRHFAAEIM----------------------GIFHQLGYTGACGSTDVTHIDWNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGY 238
BLAST of mRNA_P-littoralis_Contig690.41.1 vs. uniprot
Match: A0A6H5JG32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG32_9PHAE) HSP 1 Score: 180 bits (457), Expect = 1.750e-54 Identity = 82/113 (72.57%), Postives = 94/113 (83.19%), Query Frame = 1
Query: 388 LLPQTGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKV*KDREYKLRKADGTEFTRKGCYLIVDNGY 726
+ + G TGAIGSTDVTH+GWGMCPFTLGRS+TGKEGFPT+A++VTVDHAGRAI +T GFTGATNDKTI+RYDA V I+ + R YKLR+ADGT RKGCYLIVDNGY
Sbjct: 3 MYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHVIKADFQYTKRTYKLRRADGTFRERKGCYLIVDNGY 115
BLAST of mRNA_P-littoralis_Contig690.41.1 vs. uniprot
Match: A0A6H5KFR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR8_9PHAE) HSP 1 Score: 184 bits (467), Expect = 4.050e-52 Identity = 100/239 (41.84%), Postives = 136/239 (56.90%), Query Frame = 1
Query: 10 AWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGAGAAGREGIPVDLKVRLKMTLRTKHNILENNIDGMCTSTKYSSFPLLYVTQLLSTHRHVRGAYLPSNRNVPRRSDGLLPQTGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKV*KDREYKLRKADGTEFTRKGCYLIVDNGY 726
AW L++++L S +K FR FRVP++FFLRL L + K WF+ G AAGR+ PV+ KV +T+ + N + S K + HV Y + GF+G++GS DVTH+GW CP+ L RS+TGKEG P + ++V V HAGRAI VT+GFT +TNDKTIV +DAAV+ IR +K ++ + + DGT T KGCYL+VDNGY
Sbjct: 98 AWAQMLEDKDLDDSNSITSKQFRLDFRVPYSFFLRLGALVKSKDWFTTSGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTND-----------ELDHVMEQY---------------DRLGFSGSMGSMDVTHIGWSKCPYNLARSYTGKEGVPAIGYQVMVSHAGRAIAVTEGFTCSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGY 310 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig690.41.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig690.41.1 >prot_P-littoralis_Contig690.41.1 ID=prot_P-littoralis_Contig690.41.1|Name=mRNA_P-littoralis_Contig690.41.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=143bp MTLRTKHNILENNIDGMCTSTKYSSFPLLYVTQLLSTHRHVRGAYLPSNRback to top mRNA from alignment at P-littoralis_Contig690:152963..154148+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig690.41.1 ID=mRNA_P-littoralis_Contig690.41.1|Name=mRNA_P-littoralis_Contig690.41.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1186bp|location=Sequence derived from alignment at P-littoralis_Contig690:152963..154148+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig690:152963..154148+ >mRNA_P-littoralis_Contig690.41.1 ID=mRNA_P-littoralis_Contig690.41.1|Name=mRNA_P-littoralis_Contig690.41.1|organism=Pylaiella littoralis U1_48|type=CDS|length=429bp|location=Sequence derived from alignment at P-littoralis_Contig690:152963..154148+ (Pylaiella littoralis U1_48)back to top |