prot_P-littoralis_Contig690.33.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig690.33.2
Unique Nameprot_P-littoralis_Contig690.33.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length604
Homology
BLAST of mRNA_P-littoralis_Contig690.33.2 vs. uniprot
Match: A0A6H5KZ19_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ19_9PHAE)

HSP 1 Score: 729 bits (1882), Expect = 2.740e-258
Identity = 367/559 (65.65%), Postives = 436/559 (78.00%), Query Frame = 0
Query:   46 ANDEAWSCPICLMWFDMPVSPPCKHNFCSGCLKSVVKAAAQRQRRSDNTRASGPACPICRETFSPEAVTPDSRIFEEMLTATVSCPNGGECSAQFCPLRWKKHQEECPSATVQCTHHAVGCLWKGARREHPAHVECCAYEKIKGLVPRVSTALKQIHTQVHHLEARIMAQNAAVANTRAVLVHQRHREAVFPVVYALLWRPPDWRRYSCPSPGD-VLSNATLICVAPILFICLWGVGLFGGSSGLVVEDRAVCLVGLAILAFVMFLEYDNGSPWHEVRIPFPLQGGLAIGKSLLKNTARLVVYCAIRDLPPWKKVPAVVLLLAPLFYPPLVEAVHRFQVQVKNTQMQAQRAHAQPPLPPTEPLVPSAVKVHATVVHGVVRAVVMLGCGREAVIVGEVLAKLGVIYISAVLGPETVDALFERLWVVMSAGIAVDDINRLKTRHDTIFGEMKSPLPSMMGGRARGLIAASCTVIFAANMSYFRDNLRMIGYGRLLLSALDSAHFRLELHLGRLVMRSLRQTTTTQDPDPAGNRARDLLHSRLFLLWTVVGSMFFVLILSIS 603
            A+ +AWSCP+C MWFDMPV PPC+H FC+GCLKSVV+AAA RQRRS NT        +CRE F+PE V P +RIFEEML ATV+C NG +C+AQFCPLRWKKHQEECPSA VQC HH VGC+W+GARR+   HVE CAYEKIKGL+PRVS +LKQIHTQVH LEAR+MAQNAAVANTRA+L HQR   +VFP VYALLWRPP+WR Y  P PG  VLSN TLIC+APILF+ L G G+FGG  GLVVE+RAVCLVG+AIL FV  LE+DN SP+HE++ P  L+G LAIG+ LL+ TAR +VY A++ LP WK+ PA++ LLAPLFYP +V+AVHRF+VQVKN   QAQRA AQPPLPP EP+   AVK H TVV+GVVR   ML       +VGEVLAKLGV  +SA LGPE +DA  E +W+VMS+GIA+DD  RLK RHD+IF ++++PLP+M     R LIAA C  +FA  +++FRD L+M+GY RLLLS LDSAHFR ELH+GR+VM SL+QT T QDP+ A  RARDLL SRL LLW VVGS FF+L +  S
Sbjct:   24 AHGDAWSCPVCFMWFDMPVFPPCQHTFCAGCLKSVVRAAAHRQRRSGNTGPXXXXXXLCREPFTPEVVQPSARIFEEMLKATVTCRNG-DCAAQFCPLRWKKHQEECPSAVVQCMHHLVGCVWEGARRDLSLHVEGCAYEKIKGLIPRVSASLKQIHTQVHQLEARVMAQNAAVANTRALLAHQRQAGSVFPAVYALLWRPPNWRLYQSPRPGGGVLSNVTLICLAPILFLALCGAGVFGGGGGLVVEERAVCLVGVAILGFVALLEHDNESPYHELQTPSLLKG-LAIGEFLLEGTARSMVYFALKGLPDWKRTPALLFLLAPLFYPTVVQAVHRFEVQVKNAHNQAQRARAQPPLPPVEPV---AVKTHGTVVNGVVRGTTMLLMNPVPALVGEVLAKLGVFVVSAALGPEKLDAFLEHVWLVMSSGIALDDKARLKKRHDSIFRDLRTPLPNMTDRTTRRLIAAVCVCLFAIIVAFFRDILQMVGYSRLLLSVLDSAHFRWELHVGRVVMGSLQQTRTNQDPNFARTRARDLLRSRLLLLWVVVGSSFFLLFMLTS 577          
BLAST of mRNA_P-littoralis_Contig690.33.2 vs. uniprot
Match: H2SYS0_TAKRU (Uncharacterized protein n=3 Tax=Tetraodontidae TaxID=31031 RepID=H2SYS0_TAKRU)

HSP 1 Score: 68.6 bits (166), Expect = 1.920e-8
Identity = 54/184 (29.35%), Postives = 80/184 (43.48%), Query Frame = 0
Query:   39 PPLAGKQANDEAWS--------CPICLMWFDMPVSPPCKHNFCSGCLKSVVKAAAQRQRRSDNTRASGPACPICRETFSPEAVTPDSRIFEEMLTATVSCPNGGECSAQFCPLRWKKHQEECPSATVQCTHHA------------VGCLWKGARREHPAHVECCAYE---KIKGLVPRVSTALK 199
            PP+ GK AN  A +        C ICL  F  PVS PC H FC GC++           R  +  + G +CP CR+ +S ++  P+ RI   ++ +   C   GE S   CPL   +  E+ P+   +C+ H             + CL  G  ++H  H   C  E   K +G +     +LK
Sbjct:   52 PPVPGKVANSSAHAHRISRDLTCSICLDLFKQPVSLPCDHTFCKGCIEGYWTGP-----RGPSQGSMG-SCPQCRKVYSGQSYRPN-RIVANIVESY--CKGLGESSPAACPLE-AEVAEKVPAQVPRCSRHTEELKLYCEEDQELVCLVCGLSQDHRNHTMMCVQEAEKKYRGSLNSTMDSLK 225          
BLAST of mRNA_P-littoralis_Contig690.33.2 vs. uniprot
Match: UPI001BF49188 (tripartite motif-containing protein 16-like n=4 Tax=Alosa TaxID=34772 RepID=UPI001BF49188)

HSP 1 Score: 64.3 bits (155), Expect = 4.090e-7
Identity = 39/129 (30.23%), Postives = 55/129 (42.64%), Query Frame = 0
Query:   47 NDEAWSCPICLMWFDMPVSPPCKHNFCSGCLKSVVKAAAQRQRRSDNTRASGPACPICRETFSPEAVTPDSRIFEEMLT------------ATVSCPNGGECSAQFCPLRWKKHQEECPSATVQ-CTHH 162
            N E ++CPICL     PV+ PC HN+C GC+K       Q+   S         CP CR+TF+P  V   + +F E++             A V C   G+     C  R  K  + C    +  C +H
Sbjct:    8 NQELFTCPICLDLLKDPVTIPCGHNYCMGCIKGCWDQEDQKGVYS---------CPQCRQTFNPRPVLNKNNVFAELVEQIRKTRVQSLAPAPVECYTAGDVDCDVCTGRKLKAVKSCLECLLSYCENH 127          
BLAST of mRNA_P-littoralis_Contig690.33.2 vs. uniprot
Match: A0A6P8FJ79_CLUHA (tripartite motif-containing protein 16-like n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P8FJ79_CLUHA)

HSP 1 Score: 63.2 bits (152), Expect = 9.420e-7
Identity = 51/174 (29.31%), Postives = 74/174 (42.53%), Query Frame = 0
Query:   46 ANDE-AWSCPICLMWFDMPVSPPCKHNFCSGCLKSVVKAAAQRQRRSDNTRASGPACPICRETFSPEAVTPDSRIFEEML--------TATVSCPN------------GGE----------CSAQFCPLRWKKHQEECPSATVQCTHHAVGCLWKGARREHPA-HVECCAYEKI 187
            +ND+ ++SCPICL  F +PV+ PC H++C GC+K       QR+ + D  +     CP CR+TF+   V   + +  EM+        TAT S  N            GG+          C A +C      H E  P    +  +       K  RR H    V CC  ++I
Sbjct:    3 SNDQDSFSCPICLDLFQVPVTIPCGHSYCIGCIKGYFD---QREDQGDTAQ-----CPQCRKTFTTRPVLCKNTLIAEMVGKLREAQQTATSSSQNDAGTLEVECDVCGGKTSKAVKSCLVCLASYCETHLNLHNELNPGGKHRVVNVTGRMQDKICRRHHKLLEVFCCTDQQI 168          
BLAST of mRNA_P-littoralis_Contig690.33.2 vs. uniprot
Match: A0A3Q4M506_NEOBR (Nuclear factor 7, brain-like n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=A0A3Q4M506_NEOBR)

HSP 1 Score: 62.0 bits (149), Expect = 2.140e-6
Identity = 54/184 (29.35%), Postives = 79/184 (42.93%), Query Frame = 0
Query:   19 GNIQETKEPSERTATLGTMKPPLAGKQANDEAW------SCPICLMWFDMPVSPPCKHNFCSGCLKSVVKAAAQRQRRSDNTRASGPACPICRETFSPEAVTPD---SRIFEEML-----TATVSC-PNGGECSAQFCPL-RWKKHQEECPSATVQCTH-HAVGCLWKGARREHPAHVECCAYE 185
            G IQ++   + +TA     +PP+AGK A   A       +C ICL  F  PVS PC H FC GC++           R      +G +CP CR+ +   +  P+   + I E        + T  C P+ G       P+ R  +H+EE     + C     + CL  G  +EH +H   C  E
Sbjct:   22 GRIQKSSNFAVQTAMEKPRQPPIAGKVAKSSAHRISRDLTCSICLDLFKQPVSLPCDHTFCQGCIEGYWAGP-----RGTGQGGAG-SCPQCRKVYPGPSYRPNRIVANIVESYCQGLEESGTGPCLPDAGVPERAPAPVARCSRHREE---LKLYCEEDQELVCLVCGISQEHRSHTMVCVQE 196          
BLAST of mRNA_P-littoralis_Contig690.33.2 vs. uniprot
Match: UPI000A1C58C9 (E3 ubiquitin-protein ligase TRIM39-like n=2 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C58C9)

HSP 1 Score: 62.0 bits (149), Expect = 2.260e-6
Identity = 46/185 (24.86%), Postives = 70/185 (37.84%), Query Frame = 0
Query:   34 LGTMKPPLAGKQANDEAWSCPICLMWFDMPVSPPCKHNFCSGCLKSVVKAAAQRQRRSDNTRASGPACPICRETFSPEAVTPDSRIFEEMLTATVSCPNGGECSAQFCPLRWKKHQEECPSATVQCTHHAVGCLWKGARREHPAHVECCAYEKIKGLVPRVSTALKQIHTQVHHLEARIMAQNAA 218
            +G+    ++    N     CPICL  F  PVS PC HNFC GCL +    +   +            CP+C++ FS       + +  ++L     CP                     P   VQC   AVG     A R      E    E ++G        + ++   VH L+AR+  Q+++
Sbjct:    1 MGSNSSTVSSSPLNSSPLKCPICLDTFTQPVSTPCGHNFCKGCLDTYWSGSTVVK------------CPLCQQVFSSRPQLSTNVLLRDLLPPQ-DCPQASPTQPS-------------PPPDVQCGPCAVGGRSVRAVRSCLHCEESYCSEHLRGHQREPQLMVHELLKPVHRLQARVCKQHSS 159          
BLAST of mRNA_P-littoralis_Contig690.33.2 vs. uniprot
Match: UPI001560DC18 (E3 ubiquitin-protein ligase TRIM47-like n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI001560DC18)

HSP 1 Score: 59.3 bits (142), Expect = 2.990e-6
Identity = 42/146 (28.77%), Postives = 60/146 (41.10%), Query Frame = 0
Query:   41 LAGKQANDEAWSCPICLMWFDMPVSPPCKHNFCSGCLKSVVKAAAQRQRRSDNTRASGPACPICRETFSPEAVTPDSRIFEEMLT----------ATVSCPNGGECSAQFCPLRWKKHQEECPSATVQ-CTHHAVGCLWKGARREH 175
            +A    +++ +SCP+CL     PVS PC H++C GC+K+    A Q    S         CP CRETF+P  V   + +  E++              S    G+    FC  R  K    C +  V  C  H    L   A + H
Sbjct:    1 MASNVWSEDKFSCPVCLDLLKNPVSIPCGHSYCMGCIKNYWDQADQTGVYS---------CPQCRETFTPRPVLRRNTMLAELVEHFKMTRLNPPPAQSYAGPGDVPCDFCTGRKFKAVNSCLTCLVSYCETHVKPHLEVAALKRH 137          
BLAST of mRNA_P-littoralis_Contig690.33.2 vs. uniprot
Match: A0A4W4DSP7_ELEEL (E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4DSP7_ELEEL)

HSP 1 Score: 60.8 bits (146), Expect = 4.270e-6
Identity = 41/129 (31.78%), Postives = 64/129 (49.61%), Query Frame = 0
Query:   52 SCPICLMWFDMPVSPPCKHNFCSGCLKSVVKAAAQRQRRSDNTRASGPACPICRETF-SPEAVTPDSRIFEEMLTATVSCPNGGECSAQFCPLRWKKHQEECPSATVQCTHHAV----GCLWKGARREH 175
            SC ICL  +  PVS PC H++C GC+ SV ++ A           S P CP CR+ F SPE +  + ++   ++    +  +GG  +A+   +      ++C  +T  CTH  V     CL +G  +EH
Sbjct:   16 SCAICLQLYQDPVSLPCGHSYCLGCMHSVQRSCAP---------GSPPCCPECRQPFESPEGLPRNFKL-SGIVDGFRAAVSGGGLAAKEETVPC----QQCLESTYVCTHDHVLLCMECLLEGMHQEH 130          
BLAST of mRNA_P-littoralis_Contig690.33.2 vs. uniprot
Match: A0A8J7T9E3_ATRSP (TRI25 ligase (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7T9E3_ATRSP)

HSP 1 Score: 58.2 bits (139), Expect = 7.540e-6
Identity = 40/116 (34.48%), Postives = 52/116 (44.83%), Query Frame = 0
Query:   49 EAWSCPICLMWFDMPVSPPCKHNFCSGCLKSVVKAAAQRQRRSDNTRASGPACPICRETFSPEAV----TPDSRIFEEMLTATVS--------CPNGGECSAQFCPLRWKKHQEEC 152
            E  SCPICL     PV+ PC H++C GC+KS          + D T     +CP CRETFSP  V    T  + + EEM    +S        C   G+    FC  R  +  + C
Sbjct:   15 EQLSCPICLDILKNPVTIPCGHSYCMGCIKSCWD-------QDDQTGVY--SCPQCRETFSPRPVLHRNTVMNVVVEEMKKTGLSPPHLQPRPCSGPGDVPCDFCTGRQVRAVKSC 121          
BLAST of mRNA_P-littoralis_Contig690.33.2 vs. uniprot
Match: UPI001B7E5DAD (E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7E5DAD)

HSP 1 Score: 57.4 bits (137), Expect = 9.290e-6
Identity = 37/116 (31.90%), Postives = 55/116 (47.41%), Query Frame = 0
Query:   48 DEAWSCPICLMWFDMPVSPPCKHNFCSGCLKSVVKAAAQRQRRSDNTRASGP-ACPICRETFSPEAV----TPDSRIFEEML------TATVSCPNGGECSAQFCPLRWKKHQEEC 152
            ++ +SC +CL     PV+ PC H++C GC+K+            D+T  +G  +CP CRETF+P  V    T  + + EE+       T   SC   G+    FC  R  K  + C
Sbjct:   10 EDQFSCSVCLAILKHPVTIPCGHSYCMGCIKNYW----------DHTDHTGVYSCPQCRETFTPRPVLCRNTMLAEVVEELKKTGLNNTLAQSCAGPGDVPCDFCTGRRFKAVKSC 115          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig690.33.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ19_9PHAE2.740e-25865.65RING-type domain-containing protein n=2 Tax=Ectoca... [more]
H2SYS0_TAKRU1.920e-829.35Uncharacterized protein n=3 Tax=Tetraodontidae Tax... [more]
UPI001BF491884.090e-730.23tripartite motif-containing protein 16-like n=4 Ta... [more]
A0A6P8FJ79_CLUHA9.420e-729.31tripartite motif-containing protein 16-like n=1 Ta... [more]
A0A3Q4M506_NEOBR2.140e-629.35Nuclear factor 7, brain-like n=1 Tax=Neolamprologu... [more]
UPI000A1C58C92.260e-624.86E3 ubiquitin-protein ligase TRIM39-like n=2 Tax=Bo... [more]
UPI001560DC182.990e-628.77E3 ubiquitin-protein ligase TRIM47-like n=1 Tax=Ac... [more]
A0A4W4DSP7_ELEEL4.270e-631.78E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Elec... [more]
A0A8J7T9E3_ATRSP7.540e-634.48TRI25 ligase (Fragment) n=1 Tax=Atractosteus spatu... [more]
UPI001B7E5DAD9.290e-631.90E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Poly... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 53..104
e-value: 6.0E-9
score: 45.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 53..105
score: 11.397556
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 53..88
e-value: 4.4E-9
score: 36.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 41..163
e-value: 1.6E-19
score: 71.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 127..253
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 49..111
IPR043211TNF receptor-associated factor TRAFPANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 46..187
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 68..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig690contigP-littoralis_Contig690:108974..129404 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig690.33.2mRNA_P-littoralis_Contig690.33.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig690 108424..129499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig690.33.2 ID=prot_P-littoralis_Contig690.33.2|Name=mRNA_P-littoralis_Contig690.33.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=604bp
MESKEAGEESLRGQDTDAGNIQETKEPSERTATLGTMKPPLAGKQANDEA
WSCPICLMWFDMPVSPPCKHNFCSGCLKSVVKAAAQRQRRSDNTRASGPA
CPICRETFSPEAVTPDSRIFEEMLTATVSCPNGGECSAQFCPLRWKKHQE
ECPSATVQCTHHAVGCLWKGARREHPAHVECCAYEKIKGLVPRVSTALKQ
IHTQVHHLEARIMAQNAAVANTRAVLVHQRHREAVFPVVYALLWRPPDWR
RYSCPSPGDVLSNATLICVAPILFICLWGVGLFGGSSGLVVEDRAVCLVG
LAILAFVMFLEYDNGSPWHEVRIPFPLQGGLAIGKSLLKNTARLVVYCAI
RDLPPWKKVPAVVLLLAPLFYPPLVEAVHRFQVQVKNTQMQAQRAHAQPP
LPPTEPLVPSAVKVHATVVHGVVRAVVMLGCGREAVIVGEVLAKLGVIYI
SAVLGPETVDALFERLWVVMSAGIAVDDINRLKTRHDTIFGEMKSPLPSM
MGGRARGLIAASCTVIFAANMSYFRDNLRMIGYGRLLLSALDSAHFRLEL
HLGRLVMRSLRQTTTTQDPDPAGNRARDLLHSRLFLLWTVVGSMFFVLIL
SIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR027370Znf-RING_LisH
IPR013083Znf_RING/FYVE/PHD
IPR043211TNF_rcpt-assoc_TRAF
IPR017907Znf_RING_CS