mRNA_P-littoralis_Contig690.7.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig690.7.2
Unique NamemRNA_P-littoralis_Contig690.7.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig690.7.2 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE)

HSP 1 Score: 523 bits (1347), Expect = 9.460e-167
Identity = 255/431 (59.16%), Postives = 311/431 (72.16%), Query Frame = 3
Query:  546 RNAAEARRASVVETVRRDPALMQQLREMLGTEELGAAAARVAAANAGIVRGAAAALEGMKRHSKTSIGRMVYNCALGTVVGEGEHTSDP-----------------AASLATRAEVLGVRPATYREANARMRKVDFSVPPQQALEEGHYLWAERKTRRDVRHPRVVDLAKRYWHCDDVSRASGDSGKKAMWRPSKKAGEEYHPRRQLMVHGDKVHRMFLEWPPYVALKAELMKEDATFKDPGRSTFLTTRCGCLVEPRVSQCACEIHTQQSLYLEALAMVMGSMHEDCDCTCSWCDGGEGCKKWTGMCRNLHNFSEELLCEKVDLLAEDTEGGFEHWGRKPECVAGECSDCGFGNPDGIPTDCAALAASAHRMMGWIRFEDQKMEDGKTHKKQQLPQVGPLGDL*EEFMAHSRKTYIGHHELAKWQRKAHN 1787
            + A +  R  V ++V  D  L ++LRE+L   ELG AAA  AA +A   R   A++E +K+HS ++IGR  YN  +    G  +HT DP                 A SL  RA+ LGVR AT+R A  RM + D ++PPQ+ALE+G YLWA RK R D    RV+ LA+R+WH DD+SRASGDSG KAMWRPSKKAGEEYHPRRQLMV GD+V   FL+WP Y+ LKAEL++ED +F DPGR+ FL+TRCGCLVEP+VSQCAC+IHTQQ LYL+A  M+M ++H +CDCTC WCDGG GC KW  MC++LH+FSE L CEKVD L ED  G FEHWGRKP CVA ECS+CGFGNP GIP +C AL + A R++GW+RF DQ MEDGK HKKQQLPQ G LGDL +EF+ HS+K Y+ HHELAKWQR+AHN
Sbjct:  137 QTAIDGHRDGVKQSVLEDDVLKEELRELLRVGELGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAG-AQHTCDPDDPXXXXXXXXXXXXHGAVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKK-YLHHHELAKWQRQAHN 565          
BLAST of mRNA_P-littoralis_Contig690.7.2 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 523 bits (1347), Expect = 1.810e-160
Identity = 255/431 (59.16%), Postives = 311/431 (72.16%), Query Frame = 3
Query:  546 RNAAEARRASVVETVRRDPALMQQLREMLGTEELGAAAARVAAANAGIVRGAAAALEGMKRHSKTSIGRMVYNCALGTVVGEGEHTSDP-----------------AASLATRAEVLGVRPATYREANARMRKVDFSVPPQQALEEGHYLWAERKTRRDVRHPRVVDLAKRYWHCDDVSRASGDSGKKAMWRPSKKAGEEYHPRRQLMVHGDKVHRMFLEWPPYVALKAELMKEDATFKDPGRSTFLTTRCGCLVEPRVSQCACEIHTQQSLYLEALAMVMGSMHEDCDCTCSWCDGGEGCKKWTGMCRNLHNFSEELLCEKVDLLAEDTEGGFEHWGRKPECVAGECSDCGFGNPDGIPTDCAALAASAHRMMGWIRFEDQKMEDGKTHKKQQLPQVGPLGDL*EEFMAHSRKTYIGHHELAKWQRKAHN 1787
            + A +  R  V ++V  D  L ++LRE+L   ELG AAA  AA +A   R   A++E +K+HS ++IGR  YN  +    G  +HT DP                 A SL  RA+ LGVR AT+R A  RM + D ++PPQ+ALE+G YLWA RK R D    RV+ LA+R+WH DD+SRASGDSG KAMWRPSKKAGEEYHPRRQLMV GD+V   FL+WP Y+ LKAEL++ED +F DPGR+ FL+TRCGCLVEP+VSQCAC+IHTQQ LYL+A  M+M ++H +CDCTC WCDGG GC KW  MC++LH+FSE L CEKVD L ED  G FEHWGRKP CVA ECS+CGFGNP GIP +C AL + A R++GW+RF DQ MEDGK HKKQQLPQ G LGDL +EF+ HS+K Y+ HHELAKWQR+AHN
Sbjct:  761 QTAIDGHRDGVKQSVLEDDVLKEELRELLRVGELGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAG-AQHTCDPDDPXXXXXXXXXXXXHGAVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKK-YLHHHELAKWQRQAHN 1189          
BLAST of mRNA_P-littoralis_Contig690.7.2 vs. uniprot
Match: A0A6H5KI39_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI39_9PHAE)

HSP 1 Score: 439 bits (1128), Expect = 1.130e-142
Identity = 199/301 (66.11%), Postives = 241/301 (80.07%), Query Frame = 3
Query:  885 MRKVDFSVPPQQALEEGHYLWAERKTRRDVRHPRVVDLAKRYWHCDDVSRASGDSGKKAMWRPSKKAGEEYHPRRQLMVHGDKVHRMFLEWPPYVALKAELMKEDATFKDPGRSTFLTTRCGCLVEPRVSQCACEIHTQQSLYLEALAMVMGSMHEDCDCTCSWCDGGEGCKKWTGMCRNLHNFSEELLCEKVDLLAEDTEGGFEHWGRKPECVAGECSDCGFGNPDGIPTDCAALAASAHRMMGWIRFEDQKMEDGKTHKKQQLPQVGPLGDL*EEFMAHSRKTYIGHHELAKWQRKAHN 1787
            M K D ++PP+ ALE+G YLWA RK R D    RV+DLA+R+WH DD+SRASGDSG +A+WRPSKKAGEEYHPRRQLMV GD+V R FL+WP Y+ LKAEL++ED++F DPGR+ FL+TRCGCLVEP+VSQCAC+IHTQQ LY +A  M+M ++H +C+CTC+WCDG  GC KW  MC++LH+FSE L CEK   LAE   G FEHWGRKP CVA EC + GFGNP GIP +C AL + A R++GW+RFEDQ MEDGK HKKQQLPQ G LGDL +E + HS+K Y+ HHELAKWQR+AHN
Sbjct:    1 MHKTDHTIPPKDALEKGRYLWAPRKERTDKMDERVMDLARRFWHSDDISRASGDSGTEAVWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTMFLSTRCGCLVEPKVSQCACQIHTQQGLYHKAFEMLMPAIHANCECTCNWCDGS-GCGKWMAMCKDLHSFSEALACEKAGFLAEGRGGRFEHWGRKPACVAMECPEYGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQLPQAGKLGDLWDEVVEHSKK-YMHHHELAKWQRQAHN 299          
BLAST of mRNA_P-littoralis_Contig690.7.2 vs. uniprot
Match: A0A6H5K491_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K491_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 6.610e-142
Identity = 203/301 (67.44%), Postives = 243/301 (80.73%), Query Frame = 3
Query:  885 MRKVDFSVPPQQALEEGHYLWAERKTRRDVRHPRVVDLAKRYWHCDDVSRASGDSGKKAMWRPSKKAGEEYHPRRQLMVHGDKVHRMFLEWPPYVALKAELMKEDATFKDPGRSTFLTTRCGCLVEPRVSQCACEIHTQQSLYLEALAMVMGSMHEDCDCTCSWCDGGEGCKKWTGMCRNLHNFSEELLCEKVDLLAEDTEGGFEHWGRKPECVAGECSDCGFGNPDGIPTDCAALAASAHRMMGWIRFEDQKMEDGKTHKKQQLPQVGPLGDL*EEFMAHSRKTYIGHHELAKWQRKAHN 1787
            M + D ++PPQ+ALE+G YLWA RK R D    RV+ LA+R+WH DD+SRASGDSG KAMWRPSKKAGEEYHPRRQLMV GD+V   FL+WP Y+ LKAEL++ED++F DPGR+ FL+TRCGCLVEP++S CAC+IHTQQ LYL+ + M+M +MH +CDCTC  CDGG GC KW  MC++LH+FSE L CEKVD L ED  G FEHWGRKP CVA ECS+CGFGNP GIP +C AL + A R++GW+RFEDQ MEDGK HKKQQ+PQ G L DL +EF+ HS+K YI HHELAKWQR+AHN
Sbjct:    1 MHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKISPCACQIHTQQGLYLK-VEMLMPAMHSNCDCTCKRCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGKFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKK-YIHHHELAKWQRQAHN 299          
BLAST of mRNA_P-littoralis_Contig690.7.2 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE)

HSP 1 Score: 447 bits (1149), Expect = 4.200e-137
Identity = 227/426 (53.29%), Postives = 292/426 (68.54%), Query Frame = 3
Query:  555 AEARRASVVETVRRDPALMQQLREMLGTEELGAAAARVAAANAGIVRGAAAALEGMKRHSKTSIGRMVYNCALGTVVGEGEHT----------------SDPAASLATRAEVLGVRPATYREANARMRKVDFSVPPQQALEEGHYLWAERKTRRDVRHPRVVDLAKRYWHCDDVSRASGDSGKKAMWRPSKKAGEEYHPRRQLMVHGDKVHRMFLEWPPYVALKAELMKEDATFKDPGRSTFLTTRCGCLVEPRVSQCACEIHTQQSLYLEALAMVMGSMHEDCDCTCSWCDGGEGCKKWTGMCRNLHNFSEELLCEKVDLLAEDTEGGFEHWGRKPECVAGECSDCGFGNPDGIPTDCAALAASAHRMMGWIRFEDQKMEDGKTHKKQQLPQVGPLGDL*EEFMAHSRKTYIGHHELAKWQRKAH 1784
            AE RR+S ++ ++ DP LM+++R ML       AAA+VAA +A   R   A+L+ +K+H  +SIG   Y  AL    G GEHT                     SLA RA  LG+R  T+ +A  RM   +  + P+ A  EG Y++ ERKTR DV +P V+ LA+ +WH DDVSRA+G+SGK  M++ SKK     HPRRQLM  GD V RMFLE   Y+ALK+ L+++D+ F DPGR+TFL+TRCGCLV+P  SQCAC+IHTQQ+LYLEAL+ +MGS+H+DCDC C+WCD   GCK+W+ MC++L  FS+ L CEKV+LL  D++GGFE WGRKP C A +CS+CGFG P GIPT+C A+A +  R++ WIRFEDQ M DGK HKKQQLPQ G L DL +EFMAHS   Y+ HH LAKWQR+AH
Sbjct:  129 AEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKD-MYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDD-LGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHS---YMEHHALAKWQRQAH 549          
BLAST of mRNA_P-littoralis_Contig690.7.2 vs. uniprot
Match: A0A6H5JF90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 2.540e-135
Identity = 218/414 (52.66%), Postives = 281/414 (67.87%), Query Frame = 3
Query:  555 AEARRASVVETVRRDPALMQQLREMLGTEELGAAAARVAAANAGIVRGAAAALEGMKRHSKTSIGRMVYNCALGTVVGEGEHT----------------SDPAASLATRAEVLGVRPATYREANARMRKVDFSVPPQQALEEGHYLWAERKTRRDVRHPRVVDLAKRYWHCDDVSRASGDSGKKAMWRPSKKAGEEYHPRRQLMVHGDKVHRMFLEWPPYVALKAELMKEDATFKDPGRSTFLTTRCGCLVEPRVSQCACEIHTQQSLYLEALAMVMGSMHEDCDCTCSWCDGGEGCKKWTGMCRNLHNFSEELLCEKVDLLAEDTEGGFEHWGRKPECVAGECSDCGFGNPDGIPTDCAALAASAHRMMGWIRFEDQKMEDGKTHKKQQLPQVGPLGDL*EEFMAHSRKTYIG 1748
            AE RR+S ++ ++ DP LM+++R ML       AAA+VAA +A   R   A+L+ +K+H  +SIG   Y  AL    G GEHT                     SLA RA  LG+R  T+ +A  RM   +  + P+ A  EG Y++ ERKTR DV +P V+ LA+ +WH DDVSRA+G+SGK  M++ SKK     HPRRQLM  GD V RMFLE   Y+ALK+ L+++D+ F DPGR+TFL+TRCGCLV+P  SQCAC+IHTQQ+LYLEAL+ +MGS+H+DCDC C+WCD   GCK+W+ MC++L  FS+ L CEKV+LL  D++GGFE WGRKP C A +CS+CGFG P GIPT+C A+A +  R++ WIRFEDQ M DGK HKKQQLPQ G L DL +EFMAHS K   G
Sbjct:  129 AEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKD-MYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDD-LGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHSVKAIHG 540          
BLAST of mRNA_P-littoralis_Contig690.7.2 vs. uniprot
Match: A0A6H5KXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK6_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 3.000e-122
Identity = 210/354 (59.32%), Postives = 242/354 (68.36%), Query Frame = 2
Query: 1904 MMVSLVHHTPVD-GKHTTDAWVFVSSDPNHDFDFHIYALDIILQHYMTGEGRAATAGTPVPTVHMFTDGCAKQYKGKRNFMAVAQSLRRLGVILLHNSAVTSHFKGAHDGIGGLLKTLMREAEKRNHRIHDTSAVHKFLSEYAKGKEGDVGGHFASWSPYKIAGLHIKQLSFKEIPRPDVELTVVSGSSKLYQFMRVAEEEQESRGVCVGVQTAASTAVVNGE-EVTVNN----------------------------------SVA--------VGEEKELVANPHNWVVGRIFAPRL-RVSRKYNLRLRQTSCYCSKCRVGAYEDCIPAKKYRAVVGMVKATSGKENPILAS 2830
            MMV+LVHH+P D G+H TDAWVFVSSDPNHDFDFHIYA+DIIL++Y+TG+GRAATAGTPVPTVH+FTDGCAKQYKGKRNF AVA+SL RLGV+L+HN AVTSHFKGAHDGIGGLLK L+REAEKR  RIH+T A   FL  YA+ KE D GGHF+SWSPY+I   HIK L  +EIPRP V+LT +SGSSKLYQFM    +E+ES GV V VQ     ++V GE EV VN                                   SV         VG EKE+VANP  W         L  V+++Y LR+RQ SCYCSKC VGAY+DC+ AKKY  +VGMVK  SGK     AS
Sbjct:    1 MMVALVHHSPDDDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHNTQAAADFLQVYAEAKE-DGGGHFSSWSPYRIKRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVGVEVQKEDGVSLVGGEKEVVVNPQRWQADESTVLTLPAVTKRYKLRVRQASCYCSKCSVGAYDDCVPLVGGEKEVVANPQRWQADESTVLTLPAVTKRYKLRVRQASCYCSKCSVGAYDDCVSAKKYAGMVGMVKTVSGKHKVTRAS 353          
BLAST of mRNA_P-littoralis_Contig690.7.2 vs. uniprot
Match: A0A6H5KXG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG9_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 1.600e-115
Identity = 211/424 (49.76%), Postives = 247/424 (58.25%), Query Frame = 2
Query: 1790 VFVGTFRQGELLIETDFIEKYRHEARSILTCATAPTTTMMVSLVHHTPVD-------------------------------------------------------------GKHTTDAWVFVSSDPNHDFDFHIYALDIILQHYMTGEGRAATAGTPVPTVHMFTDGCAKQYKGKRNFMAVAQSLRRLGVILLHNSAVTSHFKGAHDGIGGLLKTLMREAEK-----------------------------------RNHRIHDTSAVHKFLSEYAKGKEGDVGGHFASWSPYKIAGLHIKQLSFKEIPRPDVELTVVSGSSKLYQFMRVAEEEQESRGVCVGVQTAASTAVVNGEEVTVNNSVAVGEEKELVANPHNWVVGRIFAPRL-RVSRKYNLRLRQTSCYCSKCRVGAYEDCIPAKKY 2770
            + + TF +G LL+ETDFIEKY+HEA +ILTCATAP+TTMMV+LVHH+P D                                                             G+H TDAWVFVSSDPNHDFDFHIYA+DIILQ+Y+TG+GRAATAGTP PTVH+FTDGCAKQYKGKRNF AVA+SL RLG IL+HN AVTSHFKGAHDGIGGLLK L+REA                                     R  RIHDT A   F+  YA+ KE D GGHF++WSPY+I   HIK L  +EIPRP V+LT +SGSSKLYQFM    +E+ES GV V VQ                      +E  +VANP  W         L  V+++Y LR+RQ SCYCSKC VGAY+DC+PAKKY
Sbjct:  213 ICLATFSKGALLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSHFKGAHDGIGGLLKALLREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQRIHDTQAAADFVKAYAEAKE-DGGGHFSTWSPYRIRRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVSVEVQ----------------------KESGVVANPQRWQADESIVRTLPAVTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKY 613          
BLAST of mRNA_P-littoralis_Contig690.7.2 vs. uniprot
Match: A0A6H5J993_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J993_9PHAE)

HSP 1 Score: 366 bits (940), Expect = 7.400e-115
Identity = 188/300 (62.67%), Postives = 219/300 (73.00%), Query Frame = 2
Query: 1937 DGKHTTDAWVFVSSDPNHDFDFHIYALDIILQHYMTGEGRAATAGTPVPTVHMFTDGCAKQYKGKRNFMAVAQSLRRLGVILLHNSAVTSHFKGAHDGIGGLLKTLMREAEKRNHRIHDTSAVHKFLSEYAKGKEGDVGGHFASWSPYKIAGLHIKQLSFKEIPRPDVELTVVSGSSKLYQFMRVAEEEQESRGVCVGVQTAASTAVVNGEEVTVNNSVA-VGEEKELVANPHNWVVGR-IFAPRLRVSRKYNLRLRQTSCYCSKCRVGAYEDCIPAKKYRAVVGMVKATSGKENPILAS 2830
            DG+H TDAWVFVSSDPNHDFDFHIYA+DIIL++Y+TG+GRAATAGTPVPTVH+FTDGCAKQYKGKRNF AVA+SL RLG +L+HN AVTSHFKGAHDGIGGLLK L+RE EKR  RIH+T A   FL  Y + KE D GGHF+SWSPY+    HIK L ++EI RP V+LT +SGSSK +QFM    +E+ES GV              G EV + N V  VG EKE+VANP  W          L V+++Y LR+RQ SC+ SKC VGAY DC+PAKKY  +VGMVKA SGK     AS
Sbjct:   24 DGQHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGNVLIHNFAVTSHFKGAHDGIGGLLKALLREVEKRGQRIHNTQAAADFLQVYPEAKE-DGGGHFSSWSPYRTKRFHIKLLGYREITRPFVDLTGISGSSKQHQFMGAEVQEEESSGV--------------GVEVQLENDVPLVGGEKEVVANPQRWQADESTVLTLLAVTKRYKLRVRQASCHRSKCSVGAYNDCVPAKKYAGMVGMVKAVSGKHKVTRAS 308          
BLAST of mRNA_P-littoralis_Contig690.7.2 vs. uniprot
Match: A0A6H5KY26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY26_9PHAE)

HSP 1 Score: 374 bits (959), Expect = 1.990e-114
Identity = 184/260 (70.77%), Postives = 214/260 (82.31%), Query Frame = 2
Query: 1796 VGTFRQGELLIETDFIEKYRHEARSILTCATAPTTTMMVSLVHHTPVD-GKHTTDAWVFVSSDPNHDFDFHIYALDIILQHYMTGEGRAATAGTPVPTVHMFTDGCAKQYKGKRNFMAVAQSLRRLGVILLHNSAVTSHFKGAHDGIGGLLKTLMREAEKRNHRIHDTSAVHKFLSEYAKGKEGDVGGHFASWSPYKIAGLHIKQLSFKEIPRPDVELTVVSGSSKLYQFMRVAEEEQESRGVCVGVQTAASTAVVNGEE 2572
            + TF +GELL+ETDFIEKY+HEA +ILTCATAP+TTMMV+LVHH+P D G+H TD WV VSSDPNHDFDFHIYA+DIIL++Y+TG+GRAATAGTPVPTVH+FTDGCAKQYKGKRNF AVA+SL RLGV+L+HN AVTSHFKGAHDGIGGLLK L+REAEKR  RIHDT A   FL  YA+ KE D GGHF++WSPY+I   HIK L  +EIPRP V+L  +SGSSKLYQFM    +E+ES GV V VQ      +V GE+
Sbjct:  280 LATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDDGRHETDTWVVVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTEAAADFLKAYAEAKE-DGGGHFSTWSPYRIRRFHIKLLGHREIPRPFVDLMGISGSSKLYQFMAAEVQEEESSGVGVEVQKENGVPLVGGEK 538          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig690.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT99_9PHAE9.460e-16759.16Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWW3_9PHAE1.810e-16059.16MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5KI39_9PHAE1.130e-14266.11Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K491_9PHAE6.610e-14267.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7E6_9PHAE4.200e-13753.29Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF90_9PHAE2.540e-13552.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXK6_9PHAE3.000e-12259.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXG9_9PHAE1.600e-11549.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J993_9PHAE7.400e-11562.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY26_9PHAE1.990e-11470.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig690contigP-littoralis_Contig690:14441..18553 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size3179
Hectar predicted targeting categoryother localisation
Exons6
Cds size1101
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig690.7.2prot_P-littoralis_Contig690.7.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig690 16061..17540 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791434.0124478-UTR-P-littoralis_Contig690:14440..158831680791434.0124478-UTR-P-littoralis_Contig690:14440..15883Pylaiella littoralis U1_48UTRP-littoralis_Contig690 14441..15883 -
1680791434.0276804-UTR-P-littoralis_Contig690:16033..160601680791434.0276804-UTR-P-littoralis_Contig690:16033..16060Pylaiella littoralis U1_48UTRP-littoralis_Contig690 16034..16060 -
1680791434.079119-UTR-P-littoralis_Contig690:17540..175961680791434.079119-UTR-P-littoralis_Contig690:17540..17596Pylaiella littoralis U1_48UTRP-littoralis_Contig690 17541..17596 -
1680791434.0898592-UTR-P-littoralis_Contig690:17977..183741680791434.0898592-UTR-P-littoralis_Contig690:17977..18374Pylaiella littoralis U1_48UTRP-littoralis_Contig690 17978..18374 -
1680791434.0996783-UTR-P-littoralis_Contig690:18398..185531680791434.0996783-UTR-P-littoralis_Contig690:18398..18553Pylaiella littoralis U1_48UTRP-littoralis_Contig690 18399..18553 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791434.0376372-CDS-P-littoralis_Contig690:16060..165121680791434.0376372-CDS-P-littoralis_Contig690:16060..16512Pylaiella littoralis U1_48CDSP-littoralis_Contig690 16061..16512 -
1680791434.0517373-CDS-P-littoralis_Contig690:16669..168761680791434.0517373-CDS-P-littoralis_Contig690:16669..16876Pylaiella littoralis U1_48CDSP-littoralis_Contig690 16670..16876 -
1680791434.0661705-CDS-P-littoralis_Contig690:17098..175401680791434.0661705-CDS-P-littoralis_Contig690:17098..17540Pylaiella littoralis U1_48CDSP-littoralis_Contig690 17099..17540 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig690.7.2

>prot_P-littoralis_Contig690.7.2 ID=prot_P-littoralis_Contig690.7.2|Name=mRNA_P-littoralis_Contig690.7.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=367bp
MQQLREMLGTEELGAAAARVAAANAGIVRGAAAALEGMKRHSKTSIGRMV
YNCALGTVVGEGEHTSDPAASLATRAEVLGVRPATYREANARMRKVDFSV
PPQQALEEGHYLWAERKTRRDVRHPRVVDLAKRYWHCDDVSRASGDSGKK
AMWRPSKKAGEEYHPRRQLMVHGDKVHRMFLEWPPYVALKAELMKEDATF
KDPGRSTFLTTRCGCLVEPRVSQCACEIHTQQSLYLEALAMVMGSMHEDC
DCTCSWCDGGEGCKKWTGMCRNLHNFSEELLCEKVDLLAEDTEGGFEHWG
RKPECVAGECSDCGFGNPDGIPTDCAALAASAHRMMGWIRFEDQKMEDGK
THKKQQLPQVGPLGDL*
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mRNA from alignment at P-littoralis_Contig690:14441..18553-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig690.7.2 ID=mRNA_P-littoralis_Contig690.7.2|Name=mRNA_P-littoralis_Contig690.7.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4113bp|location=Sequence derived from alignment at P-littoralis_Contig690:14441..18553- (Pylaiella littoralis U1_48)
TCGTCGATTCAAGCCTCGTTTCCGACGGCAATCGACTCCGCTGGGTCGAT TTACATACAGACGACATCGCCTCCGCGGGTGTCAGACACGTTCTCCGTCT GAAACCGGCTGCTGCTTCTGGCCCCCTCAGACGGGCCCCGTGGCTCAAAA ATGATGTCGGCGACCTCCTCAAAAAATAGAGCTGAGCGTTCTATCACAAT TTTGCGCGAAGACCGAATCGTGCTGCACCGATGGAAGAAGCACACCCGGG GCTTCGTTGTGACCTCCGTGCTTCTGGCTAAGAGCACCAAGAGGCCCCTT GCTGGTGAAATGAAGACGGTGGTGGCCGACTGGGCTGGAGTTGTGACGTG TGGGAAGGCGCACGCGGAAGCGATCCGGGAACGGGCTGAAAAAATCCAGA GCAGCCGGAGTACAGCAGCAGCAACGACCGCACCGACTCGGAGAAAGCGC GCCAACGCTGATGCAGAAGTCGCTGGAACCGACCCTCTGGAGACCAAGAC GTACAGCGGGAGGAGGGGTTCTCGACAGCAGCCGATGAGTAGTTCTCTAC AGCAGCCAAAGCCACGGCGAGAAACGGTGAGTTCATTACAGCAGTTGTGA TGGTTGAGCGACATGTGGATGCATTTTGCCAGCAGAACAAGAAATTAACT CTACAGCAGTGTAAAAACTGGTATCATATTATCCCCACCTTTTTCAGCAC TCGATTTTTGGTATAGTTTTCCCCCCGCCAGCATGTGCCTGATGTATTTA TGTGTACTCTCTGTCATATACCAGAGGTACAGCAGCAGCACACAGCAGCA GCAGCACAGCAGCAGTACAGCAGGTAGGTCATATCTATGATATCTTCGAG TATTATTTGGCACTGCTCTTGTATCCTAAATTGGAGTACAACTCCCCCCC CCCGCTCTCTCCCCTTCGGTGGAAACTGTTGCTGTACTGCTGCTGTGCCA TATCAAGCGGCAGAAGCACGTCGTGCTTCTGTAGTGGAGACGGTGAGGAG AGACCCCGCGTTGATGCAGCAGCTGAGGGAAATGCTGGGGACCGAAGAGC TTGGAGCGGCAGCCGCAAGAGTAGCCGCGGCTAACGCCGGGATCGTCCGC GGAGCAGCCGCTGCGTTGGAGGGCATGAAGCGGCACAGCAAAACCAGCAT CGGCCGCATGGTGTACAACTGCGCGCTGGGGACAGTCGTTGGGGAGGGGG AGCACACGAGTGACCCTGCGGCCAGCCTCGCCACGCGAGCAGAGGTTCTT GGTGTGAGACCCGCTACGTACAGAGAAGCCAACGCTCGGATGCGCAAGGT CGACTTTTCCGTACCACCGCAGCAGGCTTTGGAGGAGGGGCACTACCTTT GGGCTGAACGCAAGACCAGGAGAGACGTGAGACACCCGCGTGTGGTGGAC CTGGCGAAGCGGTACTGGCACTGCGATGATGTCTCCCGTGCGTCGGGAGA TTCGGGTAAGTTTTGCTTTTTCATTATCGCTGTTGCTGCGCATACTGCAC GTTTACTGCCGTCGCTGCTGTACCCTGCTGCTACCGTCGCTGCTGGTTTG ATTTTTGTTGATATTGCTGCTGCTGTACTCTGCTGCCGCCATCGCTGTTG TTTCAATTGCGCCGTACTGCTGTGTGTGGCCTCGAGTTATTTACCGCGCA CTTCTGTTTCGCCCCTCGCTCATGCAGGGAAGAAGGCCATGTGGAGACCG TCGAAGAAGGCAGGCGAGGAGTACCACCCACGCAGGCAGCTCATGGTCCA CGGGGACAAGGTGCATCGCATGTTTCTGGAGTGGCCGCCGTACGTGGCGC TCAAGGCAGAGCTGATGAAGGAGGATGCCACCTTCAAAGATCCAGGCCGG TCGACCTTCCTGACTACGCGGTGTGGCTGTTTAGGTGTGTGGTCACGAAA ACGCAGCGCGTTATGCGGCGTAGGAAGAATGATTTTTTCTCTGCAACACC GGCACCTGTATGACAGCGCAAGAGTGCTGACAGATGCCTTGTTTCTTTTT CCCTGCTGTACCATCGATCTTCTGTGTCTTGTGCCTTTCAGTTGAGCCAA GGGTATCGCAATGTGCTTGCGAGATCCACACGCAGCAGTCGCTCTACCTC GAAGCTCTCGCGATGGTGATGGGGTCAATGCACGAAGACTGTGACTGCAC GTGCAGTTGGTGCGACGGCGGGGAAGGTTGTAAGAAGTGGACGGGGATGT GTAGAAATCTGCATAATTTTTCGGAGGAATTATTGTGCGAGAAGGTGGAC CTTTTGGCGGAAGACACGGAGGGTGGGTTTGAGCACTGGGGGAGGAAACC GGAGTGTGTCGCCGGCGAGTGCTCAGATTGCGGGTTTGGGAACCCGGACG GTATTCCTACCGATTGTGCGGCTCTCGCTGCCTCGGCACACAGGATGATG GGGTGGATTCGTTTCGAGGACCAAAAGATGGAAGACGGCAAGACCCACAA GAAGCAGCAGTTACCGCAGGTCGGACCGTTGGGTGACCTGTAGGAAGAAT TCATGGCGCACTCCAGGAAGGTGAACCTATTAGTAACTGTTGTGTCACTC GGTCGCAGTGTAATGTTCGTTGGATTTATCAGTCAACAATTCATCTTCGC AACAAGCAGCTGAAACTGCCGTCTCCATCCCCGCCCCCCTCCTTCCTGCC CCCCCCCCCCCCCCGCCCAGACGTACATCGGGCACCATGAGCTGGCCAAG TGGCAACGCAAGGCCCACAATGTGTGTTCGTGGGGACGTTCCGCCAGGGC GAGTTGCTCATCGAAACCGACTTCATCGAGAAGTACCGGCACGAAGCCCG CTCCATCTTGACCTGCGCTACCGCGCCCACAACGACCATGATGGTGTCCC TCGTGCACCACACTCCCGTCGACGGCAAGCACACGACGGACGCATGGGTG TTCGTGTCGAGCGACCCGAACCACGACTTCGACTTTCACATCTACGCCCT GGACATCATCCTCCAGCACTACATGACGGGTGAGGGGCGTGCCGCTACTG CTGGAACACCGGTCCCGACAGTACACATGTTCACCGATGGCTGCGCCAAG CAGTACAAGGGCAAGCGCAACTTCATGGCTGTGGCGCAGAGCTTGCGCAG GCTTGGCGTCATCCTGCTGCACAACTCTGCGGTCACTTCACACTTCAAGG GCGCCCACGATGGCATCGGAGGTTTGCTCAAGACCCTCATGAGGGAAGCG GAGAAGAGAAACCACCGCATCCACGATACAAGCGCCGTGCACAAGTTTCT TTCGGAGTATGCCAAGGGGAAAGAAGGGGACGTGGGAGGGCACTTTGCAT CCTGGTCTCCGTACAAGATCGCGGGCCTCCACATCAAGCAGCTTAGTTTT AAAGAGATCCCTCGCCCGGATGTAGAGTTGACTGTCGTATCTGGCAGTTC CAAGTTGTACCAGTTCATGCGGGTAGCGGAGGAAGAGCAGGAGAGTCGAG GTGTTTGCGTCGGCGTACAGACAGCAGCCAGCACAGCCGTAGTAAACGGC GAGGAGGTGACAGTAAACAACAGTGTTGCCGTTGGCGAGGAGAAGGAACT AGTGGCTAACCCCCACAACTGGGTAGTTGGAAGGATTTTCGCTCCGCGTC TCAGAGTCTCGAGGAAGTACAACCTTCGTCTTCGCCAGACATCGTGTTAC TGTTCGAAATGCAGGGTAGGGGCATACGAGGACTGCATCCCAGCCAAAAA GTATCGGGCGGTGGTAGGCATGGTGAAGGCCACATCAGGGAAAGAGAATC CGATCCTAGCATCACGTTCAGAAGACGACCCTTTCGTGCCACCAGTTCCT CTTCTTCAGTTGTAATATACTCCGTATGTATGATGATTTAAACGTACTTT ACTTCAGTATTTTTGCAGCTTTTCAGTACATTTTGTGTTGAGCTGTCGTT TTATGAATGATATTGTTGTTGCTGTTGTGGTGGTATGATGTCTTGCTGTT TTTCCGCTCTGGTGTTCTTGGTGCTACCGGTGTTTCGTTTTCGAATACTG AGCTAAAAAAACATGGAAAATGGAAAATAAACATGAGGTTTGCAAGCTGG ATATGCACCATCTGGCTCCTGTTGTATTGATCATCTGTTATTTGAACACG GTTGGTTGCGGGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig690:14441..18553-

>mRNA_P-littoralis_Contig690.7.2 ID=mRNA_P-littoralis_Contig690.7.2|Name=mRNA_P-littoralis_Contig690.7.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1101bp|location=Sequence derived from alignment at P-littoralis_Contig690:14441..18553- (Pylaiella littoralis U1_48)
ATGCAGCAGCTGAGGGAAATGCTGGGGACCGAAGAGCTTGGAGCGGCAGC
CGCAAGAGTAGCCGCGGCTAACGCCGGGATCGTCCGCGGAGCAGCCGCTG
CGTTGGAGGGCATGAAGCGGCACAGCAAAACCAGCATCGGCCGCATGGTG
TACAACTGCGCGCTGGGGACAGTCGTTGGGGAGGGGGAGCACACGAGTGA
CCCTGCGGCCAGCCTCGCCACGCGAGCAGAGGTTCTTGGTGTGAGACCCG
CTACGTACAGAGAAGCCAACGCTCGGATGCGCAAGGTCGACTTTTCCGTA
CCACCGCAGCAGGCTTTGGAGGAGGGGCACTACCTTTGGGCTGAACGCAA
GACCAGGAGAGACGTGAGACACCCGCGTGTGGTGGACCTGGCGAAGCGGT
ACTGGCACTGCGATGATGTCTCCCGTGCGTCGGGAGATTCGGGGAAGAAG
GCCATGTGGAGACCGTCGAAGAAGGCAGGCGAGGAGTACCACCCACGCAG
GCAGCTCATGGTCCACGGGGACAAGGTGCATCGCATGTTTCTGGAGTGGC
CGCCGTACGTGGCGCTCAAGGCAGAGCTGATGAAGGAGGATGCCACCTTC
AAAGATCCAGGCCGGTCGACCTTCCTGACTACGCGGTGTGGCTGTTTAGT
TGAGCCAAGGGTATCGCAATGTGCTTGCGAGATCCACACGCAGCAGTCGC
TCTACCTCGAAGCTCTCGCGATGGTGATGGGGTCAATGCACGAAGACTGT
GACTGCACGTGCAGTTGGTGCGACGGCGGGGAAGGTTGTAAGAAGTGGAC
GGGGATGTGTAGAAATCTGCATAATTTTTCGGAGGAATTATTGTGCGAGA
AGGTGGACCTTTTGGCGGAAGACACGGAGGGTGGGTTTGAGCACTGGGGG
AGGAAACCGGAGTGTGTCGCCGGCGAGTGCTCAGATTGCGGGTTTGGGAA
CCCGGACGGTATTCCTACCGATTGTGCGGCTCTCGCTGCCTCGGCACACA
GGATGATGGGGTGGATTCGTTTCGAGGACCAAAAGATGGAAGACGGCAAG
ACCCACAAGAAGCAGCAGTTACCGCAGGTCGGACCGTTGGGTGACCTGTA
G
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