mRNA_P-littoralis_Contig690.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig690.5.1 vs. uniprot
Match: A0A6H5KJN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN9_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 4.750e-13 Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 3
Query: 3 EGWEGKAWAFIQKLRVILREHAQEAVILERAAQAAKVGGTVEIEMDVKATAEKLLAVQAKIFALLYNMDQTPIQAEMPSDTTLEKTGAKSACITTGAW--HPARGYV 317
+G+EG AWA + KLR L + A E I R A ++ E T+E+L +V+A++F L NMDQTP+Q EMP +TTLEKTGAK A I+TG + H +G+
Sbjct: 181 KGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQLASVKAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGFAAHHLQGHA 282
BLAST of mRNA_P-littoralis_Contig690.5.1 vs. uniprot
Match: A0A6H5KRF0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF0_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 9.380e-13 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 3
Query: 3 EGWEGKAWAFIQKLRVILREHAQEAVILERAAQAAKVGGTVEIEMDVKATAEKLLAVQAKIFALLYNMDQTPIQAEMPSDTTLEKTGAKSACITTG 290
+G+EG AWA + KLR L + A E I R A ++ E T+E+L +V+A++F L NMDQTP+Q EMP +TTLEKTGAK A I+TG
Sbjct: 269 KGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPEESPIKGE---DLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTG 359
BLAST of mRNA_P-littoralis_Contig690.5.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 1.270e-12 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 3
Query: 3 EGWEGKAWAFIQKLRVILREHAQEAVILERAAQAAKVGGTVEIEMDVKATAEKLLAVQAKIFALLYNMDQTPIQAEMPSDTTLEKTGAKSACITTG 290
+G+EG AWA + KLR L + A E I R A ++ E T+E+L +V+A++F L NMDQTP+Q EMP +TTLEKTGAK A I+TG
Sbjct: 240 KGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTG 330
BLAST of mRNA_P-littoralis_Contig690.5.1 vs. uniprot
Match: A0A6H5KKC9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC9_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.670e-12 Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 3
Query: 3 EGWEGKAWAFIQKLRVILREHAQEAVILERAAQAAKVGGTVEIEMDVKA---TAEKLLAVQAKIFALLYNMDQTPIQAEMPSDTTLEKTGAKSACITTG 290
+G+EG AWA + KLR L + A E A+ V + +K T+E+L +V+A++F L NMDQTP+Q EMP +TTLEKTGAK A I+TG
Sbjct: 121 QGYEGMAWATVMKLREALVKRAGEIY--------ARRHPPVPDKSPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTG 211
BLAST of mRNA_P-littoralis_Contig690.5.1 vs. uniprot
Match: A0A6H5JCV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV1_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 2.290e-12 Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 3
Query: 3 EGWEGKAWAFIQKLRVILREHAQEAVILERAAQAAKVGGTVEIEMDVKATAEKLLAVQAKIFALLYNMDQTPIQAEMPSDTTLEKTGAKSACITTG 290
+G+EG AWA + KLR L + A E + R A T ++ T+E+L +V+A++F L NMDQTP+Q EMP +TTL+KTGAK A I+TG
Sbjct: 280 KGYEGMAWATVMKLREALVKRAGE-IYARRHPPAPDESPTKGEDL----TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLDKTGAKDARISTG 370
BLAST of mRNA_P-littoralis_Contig690.5.1 vs. uniprot
Match: A0A6H5KFQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ9_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 3.060e-12 Identity = 44/99 (44.44%), Postives = 59/99 (59.60%), Query Frame = 3
Query: 3 EGWEGKAWAFIQKLRVILREHAQEAVILERAAQAAKVGGTVEIEMDVKA---TAEKLLAVQAKIFALLYNMDQTPIQAEMPSDTTLEKTGAKSACITTG 290
+G+EG AWA + LR EA++ A A+ E +K T E+L +V+A++F L NMDQTP+Q EMP +TTLEKTGAK A I+TG
Sbjct: 244 KGYEGTAWATVMNLR--------EALVQRAGAIHARRNPPAPDESPIKGEDLTCEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTG 334
BLAST of mRNA_P-littoralis_Contig690.5.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 3.940e-12 Identity = 46/96 (47.92%), Postives = 59/96 (61.46%), Query Frame = 3
Query: 3 EGWEGKAWAFIQKLRVILREHAQEAVILERAAQAAKVGGTVEIEMDVKATAEKLLAVQAKIFALLYNMDQTPIQAEMPSDTTLEKTGAKSACITTG 290
+G+EG AWA + KLR L A E I R A ++ E T E+L +V+A++F L NMDQTP+Q EMP +TTLEKTGAK A I+TG
Sbjct: 58 KGYEGMAWATVMKLREALVRRAGE--IYARRHPPAPDESPIKGE---DLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTG 148
BLAST of mRNA_P-littoralis_Contig690.5.1 vs. uniprot
Match: A0A6H5JAU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU0_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 4.230e-12 Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = 3
Query: 3 EGWEGKAWAFIQKLRVILREHAQEAVILERAAQAAKVGGTVEIEMDVKATAEKLLAVQAKIFALLYNMDQTPIQAEMPSDTTLEKTGAKSACITTGAWHPARGYVCSRISTKP 341
+G+EG AWA + KLR L + A E + R A T ++ T+E+L +V+A++F L NMDQTP+Q EMP +TTL+KTGAK I+TG +R+S+ P
Sbjct: 226 KGYEGMAWATVMKLREALVKRAGE-IYARRHPPAPDESPTKGEDL----TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLDKTGAKDTRISTGG---------TRVSSPP 324
BLAST of mRNA_P-littoralis_Contig690.5.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 8.040e-12 Identity = 52/121 (42.98%), Postives = 65/121 (53.72%), Query Frame = 3
Query: 3 EGWEGKAWAFIQKLRVILREHAQEAVILERAAQAAKVGGTVEIEMDVKATAEKLLAVQAKIFALLYNMDQTPIQAEMPSDTTLEKTGAKSACITTGAWHPARGYVCSRISTKP*PGRRGTC 365
+G EG AWA + KLR L E A E + +R A G I + ++ +L V ++F L NMDQTP+Q EMP +TTLEKTGAK A I TGA G C R KP P +C
Sbjct: 145 KGHEGMAWATLMKLRKALLERAGE-IYAQRYPPAP---GESPIRGE-DLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGA-----GVCCIRTILKPLPYPPTSC 255
BLAST of mRNA_P-littoralis_Contig690.5.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 2.680e-11 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 3
Query: 3 EGWEGKAWAFIQKLRVILREHAQEAVILERAAQAAKVGGTVEIEMDVKATAEKLLAVQAKIFALLYNMDQTPIQAEMPSDTTLEKTGAKSACITTG 290
+G EG AWA + KLR L + A E I R A ++ E T+E+L +V+A++F L NMDQTP+Q E+P +TTLEKTGAK A I+TG
Sbjct: 58 KGDEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTG 148 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig690.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig690.5.1 >prot_P-littoralis_Contig690.5.1 ID=prot_P-littoralis_Contig690.5.1|Name=mRNA_P-littoralis_Contig690.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=70bp MDVKATAEKLLAVQAKIFALLYNMDQTPIQAEMPSDTTLEKTGAKSACITback to top mRNA from alignment at P-littoralis_Contig690:10161..12250- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig690.5.1 ID=mRNA_P-littoralis_Contig690.5.1|Name=mRNA_P-littoralis_Contig690.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2090bp|location=Sequence derived from alignment at P-littoralis_Contig690:10161..12250- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig690:10161..12250- >mRNA_P-littoralis_Contig690.5.1 ID=mRNA_P-littoralis_Contig690.5.1|Name=mRNA_P-littoralis_Contig690.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=210bp|location=Sequence derived from alignment at P-littoralis_Contig690:10161..12250- (Pylaiella littoralis U1_48)back to top |