prot_P-littoralis_Contig69.146.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig69.146.1 vs. uniprot
Match: A0A6H5J7Q1_9PHAE (S4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Q1_9PHAE) HSP 1 Score: 474 bits (1220), Expect = 6.810e-166 Identity = 273/342 (79.82%), Postives = 287/342 (83.92%), Query Frame = 0
Query: 1 MRLLAAVMVPCWLCKGFVPAGQRDAGGVLATSGARAAGGLRRRGGPAVVQTGRVPCNMLAGGRGGXXXXXXXXXXXXXXVLPREKLAKQAVFEGMEKVTAAKLLDGADAALKTWSTYRSGFLPPPDVNVMLKLLDPLLDVTVQAWGGHEQAERQRLFISRDGVLASELEEEVVALEIGGQFLFDMADHRDFLGAIVNLGITRDGIGDILVQGERGAQVLVDPVMAEFLCQSLLSVRSVTVKVRPIPLEELAVRAAKMKDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAATSGTTDVREGDVVTVRGKGRVEIEEIRVTKKGRYKINMCRTT 342
MRLL AVM P C+G VPA R GV+A A GLRRR G A T RVP + AGGR XXXXX VLPREKL KQAV+EGMEK+TAAKLLDGAD+ALKTWSTY +GFLPPPDVNVM KLLDPLLDV VQ+WGGHEQAER+RLF+SR+GV ASELE EVVALEIGGQFLFDMADHRDFLGAIVNLG+TRDGIGDILVQGERGA VLVDPVMAEFL SL SVRSV VKVRPIPLEELAVR AK KDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAA SGTTDV+EGDVVTVRGKGRVEI +I VTKKGRYKINM RTT
Sbjct: 1 MRLLTAVMFPWCFCRGLVPAASRR--GVVARG--MGAPGLRRRDGGAGAGT-RVPLTLRAGGR----------XXXXXGVLPREKLLKQAVYEGMEKLTAAKLLDGADSALKTWSTYTTGFLPPPDVNVMTKLLDPLLDVEVQSWGGHEQAERKRLFVSREGVSASELESEVVALEIGGQFLFDMADHRDFLGAIVNLGVTRDGIGDILVQGERGAHVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKTKDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAAGSGTTDVKEGDVVTVRGKGRVEIGDITVTKKGRYKINMRRTT 327
BLAST of mRNA_P-littoralis_Contig69.146.1 vs. uniprot
Match: A0A836CE46_9STRA (S4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE46_9STRA) HSP 1 Score: 289 bits (740), Expect = 7.350e-94 Identity = 152/262 (58.02%), Postives = 200/262 (76.34%), Query Frame = 0
Query: 80 VLPREKLAKQAVFEGMEKVTAAKLLDGADAALKTWSTYRSGFLPPPDVNVMLKLLDPLLDVTVQAWGGHEQAERQRLFISRDGV-LASELEEEVVALEIGGQFLFDMADHRDFLGAIVNLGITRDGIGDILVQGERGAQVLVDPVMAEFLCQSLLSVRSVTVKVRPIPLEELAVRAAKMKDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAATSGTTDVREGDVVTVRGKGRVEIEEIRVTKKGRYKINMCR 340
VLP++KL QA++ G++K A ++LD A +AL+ W + FL PP+ NVML +L+ L+D+ AWGGHE+AER+R+F + DGV +A+ + VVALE+GGQFLFDMADHRD+LG+I+ GI R +GDILVQGERGAQVL P +A++LC +L SVRSVTVKV +PL EL V K V++VEASLRLD++ASAGMGMSRSKM+ AIKSG+V VNW+ A +++V+ DV+TVRGKGR+EI EI TKK RY++ M R
Sbjct: 8 VLPKDKLLSQAMYGGVDKQVATRVLDAAASALRNWELMATDFLTPPEYNVMLNVLEGLVDLQAIAWGGHEEAERRRMFFAHDGVDMATSVAVGVVALEVGGQFLFDMADHRDYLGSILGTGIERQKVGDILVQGERGAQVLCHPDIADYLCTNLSSVRSVTVKVDQVPLTELKVSPPIKKHVTSVEASLRLDAIASAGMGMSRSKMADAIKSGMVFVNWREAKGPSSEVKASDVITVRGKGRLEILEIHETKKERYRVVMNR 269
BLAST of mRNA_P-littoralis_Contig69.146.1 vs. uniprot
Match: D7FH66_ECTSI (RNA-binding S4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH66_ECTSI) HSP 1 Score: 269 bits (687), Expect = 1.700e-87 Identity = 145/158 (91.77%), Postives = 150/158 (94.94%), Query Frame = 0
Query: 185 MADHRDFLGAIVNLGITRDGIGDILVQGERGAQVLVDPVMAEFLCQSLLSVRSVTVKVRPIPLEELAVRAAKMKDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAATSGTTDVREGDVVTVRGKGRVEIEEIRVTKKGRYKINMCRTT 342
MADHRDFLGAIVNLG+TRDGIGDILVQGERGAQVLVDPVMAEFL SL SVRSV VKVRPIPLEELAVR AK KDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAA+SGTT+VREGD+VTVRGKGRVEI +I VTKKGRYKINMCRTT
Sbjct: 1 MADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKTKDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAASSGTTNVREGDIVTVRGKGRVEIGDITVTKKGRYKINMCRTT 158
BLAST of mRNA_P-littoralis_Contig69.146.1 vs. uniprot
Match: A0A251WKT0_9CYAN (Photosystem II S4 domain protein n=2 Tax=unclassified Alkalinema TaxID=2635015 RepID=A0A251WKT0_9CYAN) HSP 1 Score: 252 bits (643), Expect = 2.350e-79 Identity = 136/263 (51.71%), Postives = 185/263 (70.34%), Query Frame = 0
Query: 80 VLPREKLAKQAVFEGME-KVTAAKLLDGADAALKTWSTYRSGFLPPPDVNVMLKLLDPLLDVTVQAWGGHEQAERQRLFISRDGV-LASELEEEVVALEIGGQFLFDMADHRDFLGAIVNLGITRDGIGDILVQGERGAQVLVDPVMAEFLCQSLLSVRSVTVKVRPIPLEELAVRAAKMKDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAATSGTTDVREGDVVTVRGKGRVEIEEIRVTKKGRYKINMCR 340
+LPRE L K G+E + T A+++D A+ A+KTW ++ FL PP++ + ++ L D+ + WGG+ QAERQR+ I+R + L E + E+ ALEI G FLFD A HRDFLGA++ GI RD +GDI+V GERGAQ +V P +AEFL L VRSV VK RPIPL EL +R K K+++TVEAS+RLD++ASAG GMSRSKM+ I SG V VNWK +S + V+ GD++ VRGKGRVE+ ++ +TKK RY++N+ R
Sbjct: 1 MLPREDLLK-----GVENRETVAQVIDRAEQAIKTWEVVQTDFLAPPELAEVQQIFSRLTDIHLLTWGGYPQAERQRVAIARSEIPLDQETQVELTALEIAGNFLFDTATHRDFLGAMLGTGIVRDKVGDIIVLGERGAQAIVVPELAEFLAMQLTQVRSVPVKTRPIPLTELKIREPKKKELTTVEASMRLDAIASAGFGMSRSKMADLITSGDVRVNWKEISSTSHPVKSGDLIAVRGKGRVEVGDVAITKKDRYRVNLTR 258
BLAST of mRNA_P-littoralis_Contig69.146.1 vs. uniprot
Match: A0A1Z4JNZ0_LEPBY (RNA-binding protein S4 n=1 Tax=Leptolyngbya boryana NIES-2135 TaxID=1973484 RepID=A0A1Z4JNZ0_LEPBY) HSP 1 Score: 249 bits (636), Expect = 2.590e-78 Identity = 135/262 (51.53%), Postives = 181/262 (69.08%), Query Frame = 0
Query: 80 VLPREKLAKQAVFEGMEKVTA-AKLLDGADAALKTWSTYRSGFLPPPDVNVMLKLLDPLLDVTVQAWGGHEQAERQRLFISRDGVLASELEEEVVALEIGGQFLFDMADHRDFLGAIVNLGITRDGIGDILVQGERGAQVLVDPVMAEFLCQSLLSVRSVTVKVRPIPLEELAVRAAKMKDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAATSGTTDVREGDVVTVRGKGRVEIEEIRVTKKGRYKINMCR 340
+LPRE L K G+E A A+++D A+ A+KTW S FL PP++ + + L +V + AWGG+ QAERQRL I+R + + E+VAL+I G FLFD A HRDFLGAI+ GI RD +GDI+V GERGAQ +V P + EFL +L VRSV VK +PIP EEL +R K K+++TVEAS+RLD++ASAG GMSRSKM+ I +G V VNWK TS + V+ GD++ +RGKGRVE+ ++ VTKK RY++ + R
Sbjct: 1 MLPREDLLK-----GVENREAIARVIDQAEQAIKTWEVVTSDFLSPPELAEIQRSFSRLTEVQLLAWGGYPQAERQRLAIARSEIPLDPSQVELVALDIAGNFLFDPATHRDFLGAILGTGIVRDKVGDIIVLGERGAQAIVTPELGEFLQTALTQVRSVPVKTQPIPFEELKIREPKKKEITTVEASMRLDAIASAGFGMSRSKMADLITAGDVRVNWKEITSSSYSVKAGDLIAIRGKGRVEVGDVMVTKKDRYRVQLTR 257
BLAST of mRNA_P-littoralis_Contig69.146.1 vs. uniprot
Match: A0A0P4UVE6_9CYAN (S4 domain-containing protein n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A0P4UVE6_9CYAN) HSP 1 Score: 248 bits (633), Expect = 7.340e-78 Identity = 134/262 (51.15%), Postives = 180/262 (68.70%), Query Frame = 0
Query: 80 VLPREKLAKQAVFEGME-KVTAAKLLDGADAALKTWSTYRSGFLPPPDVNVMLKLLDPLLDVTVQAWGGHEQAERQRLFISRDGVLASELEEEVVALEIGGQFLFDMADHRDFLGAIVNLGITRDGIGDILVQGERGAQVLVDPVMAEFLCQSLLSVRSVTVKVRPIPLEELAVRAAKMKDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAATSGTTDVREGDVVTVRGKGRVEIEEIRVTKKGRYKINMCR 340
+LPRE L K G+E + T A+++D A+ A+KTW S FL PP++ + L +V + AWGG+ QAERQRL I+R + + E+ AL+I G FLFD A HRDFLGAI+ GI R+ +GDI+V GERGAQ +V P + +FL SL VRSV VKV PIP EEL +R K K+++TVEAS+RLD++ASAG GMSRSKM+ I +G V VNWK +S + V+ GD++ +RGKGRVE+ E+ VTKK RY++ + R
Sbjct: 1 MLPREDLLK-----GVENRDTIARVIDQAEKAIKTWEVVTSDFLSPPELAEAERSFSRLTEVQLIAWGGYSQAERQRLAIARSEIPLDAAQVELTALDIAGNFLFDSATHRDFLGAILGTGIVREKVGDIIVLGERGAQAIVIPELVDFLQTSLKQVRSVPVKVEPIPFEELKIREPKKKEITTVEASMRLDAIASAGFGMSRSKMAEMISAGDVRVNWKETSSASYSVKSGDLIAIRGKGRVEVGEVMVTKKDRYRVQLTR 257
BLAST of mRNA_P-littoralis_Contig69.146.1 vs. uniprot
Match: K9S3C7_9CYAN (Photosystem II S4 domain protein n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9S3C7_9CYAN) HSP 1 Score: 244 bits (622), Expect = 3.350e-76 Identity = 133/261 (50.96%), Postives = 176/261 (67.43%), Query Frame = 0
Query: 80 VLPREKLAKQAVFEGMEKVTAAKLLDGADAALKTWSTYRSGFLPPPDVNVMLKLLDPLLDVTVQAWGGHEQAERQRLFISRDGVLASELEEEVVALEIGGQFLFDMADHRDFLGAIVNLGITRDGIGDILVQGERGAQVLVDPVMAEFLCQSLLSVRSVTVKVRPIPLEELAVRAAKMKDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAATSGTTDVREGDVVTVRGKGRVEIEEIRVTKKGRYKINMCR 340
+LPR++L ++A + AA+L+D A+ A+KTW + FL PP++ ++ L +V + WGG+ QAERQRL I+R + + EV LEI G FLFD A HRDFLGA++ GI RD +GDI+V G+RGAQ LV P M +FL SL VRSV VK +PI L EL VR K K+++TVEAS+RLD++ASAG GMSRSKM+ I G V VNW+ T + V+ GD+V VRGKGR+EI E+ VTKK RY+I + R
Sbjct: 1 MLPRDELLQKA----QNREAAAQLIDAAERAIKTWEVVLTDFLSPPEMADAQQMFGRLTEVQLMGWGGYPQAERQRLAIARPEIPLEASQVEVAVLEIAGNFLFDPATHRDFLGAVLGTGIVRDKVGDIVVLGDRGAQALVVPEMVDFLAMSLTQVRSVPVKTQPIDLAELKVREPKKKEMTTVEASMRLDAIASAGFGMSRSKMADLITGGDVRVNWRDVTQASYQVKAGDLVAVRGKGRLEIGEVAVTKKDRYRIQLTR 257
BLAST of mRNA_P-littoralis_Contig69.146.1 vs. uniprot
Match: A0A7C3PHM9_9CYAN (Photosystem II S4 domain protein n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PHM9_9CYAN) HSP 1 Score: 242 bits (618), Expect = 1.340e-75 Identity = 134/261 (51.34%), Postives = 174/261 (66.67%), Query Frame = 0
Query: 80 VLPREKLAKQAVFEGMEKVTAAKLLDGADAALKTWSTYRSGFLPPPDVNVMLKLLDPLLDVTVQAWGGHEQAERQRLFISRDGVLASELEEEVVALEIGGQFLFDMADHRDFLGAIVNLGITRDGIGDILVQGERGAQVLVDPVMAEFLCQSLLSVRSVTVKVRPIPLEELAVRAAKMKDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAATSGTTDVREGDVVTVRGKGRVEIEEIRVTKKGRYKINMCR 340
+LPRE L K E E + A+++D A+ A+KTW S FL PP++ L L D+ AWGG+ QAERQRL I+R + + + A+EI G FLFD A HRDFLGA++ GI R+ +GDI+V GERGAQ +V P + EFL SL VRSV VK R IP EEL +R K K+++TVEAS+RLD++ASAG GMSRSKM+ I G V VNWK TS + V+ GD++ +RGKGRVE+ EI VTKK RY++ + R
Sbjct: 1 MLPREDLLKGV--ENRELI--ARVIDQAEHAIKTWEVVISDFLSPPEMMEAQASLQRLTDIHCMAWGGYAQAERQRLAIARPEIPLDNTQVALAAIEIAGNFLFDPATHRDFLGAVLGTGIVREKVGDIIVLGERGAQAIVVPELVEFLSMSLTQVRSVPVKTRLIPFEELRIREPKKKEMTTVEASVRLDAIASAGFGMSRSKMADMISGGDVRVNWKDVTSASHQVKTGDLIAIRGKGRVEVGEIAVTKKDRYRVQLTR 257
BLAST of mRNA_P-littoralis_Contig69.146.1 vs. uniprot
Match: A0A6P0XXH7_9CYAN (Photosystem II S4 domain protein n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0XXH7_9CYAN) HSP 1 Score: 242 bits (617), Expect = 1.900e-75 Identity = 131/261 (50.19%), Postives = 186/261 (71.26%), Query Frame = 0
Query: 80 VLPREKLAKQAVFEGMEKVTAAKLLDGADAALKTWSTYRSGFLPPPDVNVMLKLLDPLLDVTVQAWGGHEQAERQRLFISRDGVLASELEEEVVALEIGGQFLFDMADHRDFLGAIVNLGITRDGIGDILVQGERGAQVLVDPVMAEFLCQSLLSVRSVTVKVRPIPLEELAVRAAKMKDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAATSGTTDVREGDVVTVRGKGRVEIEEIRVTKKGRYKINMCR 340
+LPREK+ ++A E E++ A++LD A++A K W + FL PP + + + L ++ V AWGG+ QAERQR+ I+R+ + + + ++ L++ G FLFD A+HRDFLGAI+ G+ RD IGDI+V GERGAQV+V P + EFL SL VRSV VK R I EL VR K K+++TVEAS+RLD++ASAG+GMSRSKM+ AI SG V VNWKA T + +V+ GD+++VRGKGR+E+ E+ +TKK RY++++ R
Sbjct: 1 MLPREKILQKA--EHREEI--ARILDLAESAGKNWEVVLTDFLSPPVLAEVQDIFSHLTELKVVAWGGYPQAERQRVAIAREELPLEQTQIQLALLDLAGNFLFDPANHRDFLGAILGTGVVRDKIGDIVVLGERGAQVIVVPELVEFLETSLAQVRSVPVKTRQIEFSELKVRPPKKKEITTVEASMRLDAIASAGLGMSRSKMAEAINSGDVRVNWKAVTQASYNVQSGDLISVRGKGRLEVGEVAITKKQRYRVHLTR 257
BLAST of mRNA_P-littoralis_Contig69.146.1 vs. uniprot
Match: A0A0F6U623_MICAE (S4 domain-containing protein n=72 Tax=Microcystis TaxID=1125 RepID=A0A0F6U623_MICAE) HSP 1 Score: 241 bits (616), Expect = 2.690e-75 Identity = 131/261 (50.19%), Postives = 184/261 (70.50%), Query Frame = 0
Query: 80 VLPREKLAKQAVFEGMEKVTAAKLLDGADAALKTWSTYRSGFLPPPDVNVMLKLLDPLLDVTVQAWGGHEQAERQRLFISRDGVLASELEEEVVALEIGGQFLFDMADHRDFLGAIVNLGITRDGIGDILVQGERGAQVLVDPVMAEFLCQSLLSVRSVTVKVRPIPLEELAVRAAKMKDVSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAATSGTTDVREGDVVTVRGKGRVEIEEIRVTKKGRYKINMCR 340
+LPRE+L K E E + AK++D A+ A+KTW + FL P + + ++ L DV++Q WGG+ QAERQR+ I+R + +E AL+I G FLFD A+HRDFLGA++ GI R+ +GDI+V GERGAQ +V P +A+FLC +LL VRSV VK PIPL EL VR + K+++TVEASLRLD++ASAG G+SRSKM+ AI +G V VNWK + + +V+ GD+++ RGKGR+E+ E+ VTKK RY++++ R
Sbjct: 1 MLPREELLKGV--ENREDI--AKVIDKAEQAIKTWEVTVTDFLSPAVLAEVERVFQRLTDVSMQKWGGYPQAERQRIGIARVDLPLAEXXXXXXALDIAGNFLFDTANHRDFLGAMLGTGIVREKVGDIIVLGERGAQAIVVPELADFLCANLLQVRSVPVKTSPIPLTELKVRPPQKKEINTVEASLRLDAIASAGFGISRSKMAEAISAGDVRVNWKDISQSSYNVKTGDLISFRGKGRLEVGEVTVTKKERYRVHLTR 257 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig69.146.1 ID=prot_P-littoralis_Contig69.146.1|Name=mRNA_P-littoralis_Contig69.146.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=343bpback to top |