prot_P-littoralis_Contig69.124.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig69.124.1
Unique Nameprot_P-littoralis_Contig69.124.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length91
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig69.124.1 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 2.020e-30
Identity = 61/88 (69.32%), Postives = 72/88 (81.82%), Query Frame = 0 
Query:    2 RFAHIRAGMGCHKAPTASQAAQAGMHGDTCRLSHGERRRNSSRSGGQPFDIQQGATLRVALPVNAEERGEVVRAATWRNADHVFETRS 89
            RFAHIR GMG HKAPTA+QAA+   HGDTCR+SHG +RRN+SRS G  F++Q  A++RVALPVNA ER EVVRAATW   DHVFE+R+
Sbjct:  805 RFAHIRTGMGTHKAPTATQAARQAKHGDTCRVSHGLQRRNASRSTGS-FEVQSSASIRVALPVNASEREEVVRAATWDRDDHVFESRA 891
[Close]
BLAST of mRNA_P-littoralis_Contig69.124.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.350e-22
Identity = 51/88 (57.95%), Postives = 60/88 (68.18%), Query Frame = 0 
Query:    2 RFAHIRAGMGCHKAPTASQAAQAGMHGDTCRLSHGERRRNSSRSGGQPFDIQQGATLRVALPVNAEERGEVVRAATWRNADHVFETRS 89
            RFAHIR+G G HK PTA QA +A   GDT R+ HG RRRNSSRS G  F ++    +R A P NA ER +VVRA T  +A HVFE+RS
Sbjct:  581 RFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNSSRSAGMAFQLEDSQGVRAAFPANASERAQVVRAETRDDAHHVFESRS 668
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KFP1_9PHAE2.020e-3069.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Z3_9PHAE1.350e-2257.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig69contigP-littoralis_Contig69:517657..517929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig69.124.1mRNA_P-littoralis_Contig69.124.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig69 516920..517946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig69.124.1 ID=prot_P-littoralis_Contig69.124.1|Name=mRNA_P-littoralis_Contig69.124.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=91bp
MRFAHIRAGMGCHKAPTASQAAQAGMHGDTCRLSHGERRRNSSRSGGQPF
DIQQGATLRVALPVNAEERGEVVRAATWRNADHVFETRSV*
back to top