prot_P-littoralis_Contig69.86.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig69.86.1
Unique Nameprot_P-littoralis_Contig69.86.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length110
Homology
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BLAST of mRNA_P-littoralis_Contig69.86.1 vs. uniprot
Match: A0A6H5JTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTD4_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 1.130e-42
Identity = 78/109 (71.56%), Postives = 92/109 (84.40%), Query Frame = 0 
Query:    1 MARQLSQQLDSQRETLERRAKTAERLRESSRKKWSDCLSNKEKRNQTSEMHVRLAGLVGGSLSAWLICVALGLAWAPRASLALGLPCTLVMAALCSTRLPRPTVRLRTD 109
            MARQLSQQLDSQRETLE RA TAE LR+ SR+K S+CL +  +R+Q +E+  RLAGLVGGSLSAWL CVALGL WAPR +LALG+PCTLVMAALCS R+P P+V+ R+D
Sbjct:   33 MARQLSQQLDSQRETLEGRATTAEALRDFSRQKCSECLESHTRRDQAAEVPARLAGLVGGSLSAWLFCVALGLTWAPRVALALGIPCTLVMAALCSKRMPWPSVKRRSD 141
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.86.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JTD4_9PHAE1.130e-4271.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig69contigP-littoralis_Contig69:391420..393696 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig69.86.1mRNA_P-littoralis_Contig69.86.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig69 391399..393696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig69.86.1 ID=prot_P-littoralis_Contig69.86.1|Name=mRNA_P-littoralis_Contig69.86.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=110bp
MARQLSQQLDSQRETLERRAKTAERLRESSRKKWSDCLSNKEKRNQTSEM
HVRLAGLVGGSLSAWLICVALGLAWAPRASLALGLPCTLVMAALCSTRLP
RPTVRLRTD*
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