mRNA_P-littoralis_Contig69.41.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig69.41.1
Unique NamemRNA_P-littoralis_Contig69.41.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig69.41.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 2.050e-128
Identity = 207/407 (50.86%), Postives = 266/407 (65.36%), Query Frame = 1
Query:  262 C*LCWTSWNRWTS-----IRNRSTAAR*SGVKDEAGRLTASPSWRTGPSDRVSAWTTTTSWTWWICS---ALNWRETLTWGAFATVRSL*SVCVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNRRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDARYRIRAWTTNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1458
            C  CW  W  WT+     +R R  AA  S  +    R T+S   +T  S    AW+T TS    +     AL   + +  G            V  TLRWLAGG + +   GHVIA+STAY     VI A+NAC  L C+WPE + D    A  F  RS+  V+ KCVGA DGLFVR ++P++++  EPN +Y+GHKKGFGMNFQA+CDA+YRI AW  NCPGSQNDRTAF  SGF KLL  LP+G+++VGDAAY  S+ V+VP+PGT +S SQDA NYY+SQCR+AIEQT+GILVRRWGILW+P+E+R+     +V ++VRLHNFCRDRKV+VPT   G    P  + F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+  R
Sbjct:   10 CRACWMHWPFWTTSQRSMLRRRGAAAPWSRERGGLSRPTSSRCCKTTRSRCAFAWSTMTSGLVLVDHLRPALQKNQQM--GLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 413          
BLAST of mRNA_P-littoralis_Contig69.41.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 5.060e-104
Identity = 172/307 (56.03%), Postives = 210/307 (68.40%), Query Frame = 1
Query:  529 LRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNRRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDARYRIRAWTTNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 1449
            LR+LAGG + ++  G+VIA+STAY    RVI AIN    L+C WPE +   D     + RRSTNGVI  CVGAMDGLFVR  +P+ R    P SFYSGHKKGFGMNFQ +C+ARY I AWT NCPGS NDRTAFK S F  +L+ LP G YIVGDAAYP SD VLVPYPGT ++ SQDA N+Y SQ RI+IEQ FGI+V+ WGILW+PL++RL  V+ ++ S+VRLHNF R R+  +P +    V  P  + F   G     +F+T P+  GR  R   R SAPRE IR+ LEQ  +GRP  N+ RN
Sbjct:  112 LRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGM-YRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNFLRRRRARIPRSP-WRVTQPVEVRFRPDGSLEGTYFDTVPTR-GRQTRG-GRASAPREAIRQYLEQYSIGRPRWNLQRN 414          
BLAST of mRNA_P-littoralis_Contig69.41.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 6.270e-102
Identity = 147/245 (60.00%), Postives = 192/245 (78.37%), Query Frame = 1
Query:  724 VIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDARYRIRAWTTNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1458
            V+ KCVGAMDGLFVR ++P++++  EPN +Y+GHK GFGMNFQA+CDA+YRI AWT +CPGSQNDRTAF  + F KLL  LP+G+++VGDAAY  S+ V+VP+PGT +S SQDA NYY+SQCR+AIEQT+GILVRRWGILW+P+E+R+     +V ++VRLHNFCRDRKV+VPT   G    P  + F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+  R
Sbjct:   17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 261          
BLAST of mRNA_P-littoralis_Contig69.41.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 318 bits (816), Expect = 1.370e-98
Identity = 162/302 (53.64%), Postives = 202/302 (66.89%), Query Frame = 1
Query:  544 GGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNRRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDARYRIRAWTTNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 1449
            GG + ++  G V AKSTAY    RVI AIN     +C WPE     D     + +RSTN VI  CVGAMDGLFV    P+ R    P  FYSGHKKGFGMNFQA+C+ARY+I AWT NCPGS NDRTAFK SGF ++L+ LPKG YIVGD AYP SD VLVPYPGT ++ SQD+ N+Y SQ RI IEQ FG +V+ WGILW+PL+++LG V+ ++ ++VRLHNF R  + +VP +    V  P  + F   G     +++T P+  GRP   Q RVSAPRE IR+ L+Q  +GRP  N+ RN
Sbjct:   51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGV-YRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNFLRRWRAKVPQSP-WRVDQPQEVRFAPDGSLEGTYYDTVPTR-GRPTTGQ-RVSAPREAIRQYLKQYSIGRPRWNLQRN 348          
BLAST of mRNA_P-littoralis_Contig69.41.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 2.760e-97
Identity = 168/311 (54.02%), Postives = 210/311 (67.52%), Query Frame = 1
Query:  526 TLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNRRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDARYRIRAWTTNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1458
            TLR+LAGG + ++   +VIAKSTAY    RVI AIN    L C+WP    D ++ A  + RRSTNGVI +CVGAMDGLFVR + P  +    P SFYSGHKK FGMNFQ IC+A Y I  WT NCPGSQNDRTAFK SGF  LL  +P   +IVGDAAYP S+ VLVP PGT ++ SQDA N+Y SQ RI+IEQ FGILV+ W ILWKPL +RL  V  ++ ++VRLHNF R R+  V    A +V +P ++ F+  G     +++T P+  GRP++  A V  PRE IR  L+Q  MGRP  N++RN +R
Sbjct:  115 TLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGD-DAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNFLRRRRAPV-LQSAWNVPMPESVTFHPDGGIDGSYYDTVPTR-GRPSKA-AEVCMPREIIRDYLDQKSMGRPRFNLNRNVNR 421          
BLAST of mRNA_P-littoralis_Contig69.41.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 9.730e-90
Identity = 152/314 (48.41%), Postives = 200/314 (63.69%), Query Frame = 1
Query:  517 VGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNRRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDARYRIRAWTTNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1458
            V  TLRWLAGG + +   GHVIA+STAY     VI A+NAC  L C+WPE + D     +     +   V+ KCVGAMDGLFVR ++P++++  EPN +Y+GHKKGFGMNFQ +C               SQNDRTAF  SGF KLL  LP+G+++VG+AAY  S+ V+VP+PGT                    EQT+GILVRRWGILW+P+E+R+     +V ++VRLHNFC DRKV+VPT   G    P  + F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+  R
Sbjct:  112 VAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VC---------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPX----------------EQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCWDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 392          
BLAST of mRNA_P-littoralis_Contig69.41.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.650e-65
Identity = 115/213 (53.99%), Postives = 148/213 (69.48%), Query Frame = 1
Query:  820 GHKKGFGMNFQAICDARYRIRAWTTNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1458
            GH       + A+CDA+YRI AW  NCPGSQNDRTAF  SGF KLL  LP+G+++VGDAAY  S+ V+VP+PGT +S SQDA NYY+SQCR+AIEQT+GILV   G+    +E        +V ++VRLHNFCRDRKV+VPT   G    P  + F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+  R
Sbjct:  130 GHVIARSTAYHAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 335          
BLAST of mRNA_P-littoralis_Contig69.41.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.470e-60
Identity = 123/314 (39.17%), Postives = 166/314 (52.87%), Query Frame = 1
Query:  517 VGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNRRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDARYRIRAWTTNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1458
            +  TLRWLAGG + +   GHVIA+STAY     VI A+NAC  L C+WPE + D               V+ KCVGAMDGLFVR ++P++++  EPN +Y+GH+KG                                                 +VGDAAY  S+ V+VP+PGT +S SQDA N Y+SQ R+AIEQT+GILVRRWGILW+P+E+R+     +V                                F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+ +R
Sbjct:  112 IAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMD---------------VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVV-------------------------------AFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLIRPEHNIARSHNR 331          
BLAST of mRNA_P-littoralis_Contig69.41.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 7.420e-55
Identity = 104/236 (44.07%), Postives = 146/236 (61.86%), Query Frame = 1
Query:  529 LRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINAC-EALECRWPEKQTDYDSIAAGFNRRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDARYRIRAWTTNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKV 1233
            LR LAG   LD+     +   T Y T   VI AIN+  E     +P+ + D    AA F R+STNG+ + CV  +DGLFV+TL P+ +DT    ++YSG K  +G+N QA+C A YR  + +   PG+ ND  A+  S   + +  LPKG+Y++GDAAYP S+ +L PYPG  +   +D+ N++LSQ R+ IEQ+FGILV  WGILW+PL++       L+ +L RLHNF RD +V
Sbjct:  131 LRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKVDFAGRTDLITALFRLHNFLRDEQV 366          
BLAST of mRNA_P-littoralis_Contig69.41.1 vs. uniprot
Match: A0A6H5JD50_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD50_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 1.090e-51
Identity = 125/346 (36.13%), Postives = 177/346 (51.16%), Query Frame = 1
Query:  445 SALNWRETL---------TWGAFATVRSL*SVCVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALEC-RWPEKQTDYDSIAAGFNRRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDARYRIRAWTTNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNI-GFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 1449
            SAL W+ TL         T GA A       V V   LR LAGG   D+     ++++  +    +VI AIN   A+    +P  +      A  F  +ST+G+ +  V A+DGLF++   P ++DT    ++YSG K  +G+N QA+C A YR  A +   PGS ND  A+  S   K +  LP G++I+GDAAYP  + +L PYPG  +   +D+ N++LSQ R+ IEQ+FGILV  WGILW+PL ++    A L+ +L  LHNF +D KV        D R   N      +     D ++TE  +  R     AR +     IR  LE     RP +N  RN
Sbjct:  109 SALRWKSTLSSAQALRSPTNGAIAV-----EVRVAAALRILAGGSYWDVALMFGLSRAVTFDILWQVIDAINETPAIGAFDFPLTEEGCMRNANRFKEKSTDGIFSWVVAAVDGLFIKAKAPYAKDTANVLAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRLLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRVQFAGRADLITALFHLHNFLQDEKVSPIQVAEEDSRSGRNRPALCATQRTLPDGWQTEQPAPSRSGETPARAA-----IRTALELKKQWRPDYNRRRN 444          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.41.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6B6_9PHAE2.050e-12850.86DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5K3F2_9PHAE5.060e-10456.03DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KNF2_9PHAE6.270e-10260.00DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KCG0_9PHAE1.370e-9853.64DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6M2_9PHAE2.760e-9754.02DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JJA1_9PHAE9.730e-9048.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K540_9PHAE1.650e-6553.99DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JVS8_9PHAE1.470e-6039.17DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L386_9PHAE7.420e-5544.07DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JD50_9PHAE1.090e-5136.13DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig69contigP-littoralis_Contig69:162818..166648 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4792.ETI53028
PFAMsDDE_Tnp_4
Model size2355
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.32e-40
EggNOG OGsKOG4585@1|root,KOG4585@2759|Eukaryota,3QI3U@4776|Peronosporales
Descriptionnuclease activity
Cds size915
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig69.41.1prot_P-littoralis_Contig69.41.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig69 163706..165773 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791430.424029-UTR-P-littoralis_Contig69:162817..1637051680791430.424029-UTR-P-littoralis_Contig69:162817..163705Pylaiella littoralis U1_48UTRP-littoralis_Contig69 162818..163705 -
1680791430.4773953-UTR-P-littoralis_Contig69:165773..1658091680791430.4773953-UTR-P-littoralis_Contig69:165773..165809Pylaiella littoralis U1_48UTRP-littoralis_Contig69 165774..165809 -
1680791430.488627-UTR-P-littoralis_Contig69:166132..1666481680791430.488627-UTR-P-littoralis_Contig69:166132..166648Pylaiella littoralis U1_48UTRP-littoralis_Contig69 166133..166648 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791430.440927-CDS-P-littoralis_Contig69:163705..1640501680791430.440927-CDS-P-littoralis_Contig69:163705..164050Pylaiella littoralis U1_48CDSP-littoralis_Contig69 163706..164050 -
1680791430.452197-CDS-P-littoralis_Contig69:164295..1645651680791430.452197-CDS-P-littoralis_Contig69:164295..164565Pylaiella littoralis U1_48CDSP-littoralis_Contig69 164296..164565 -
1680791430.4621325-CDS-P-littoralis_Contig69:165473..1657731680791430.4621325-CDS-P-littoralis_Contig69:165473..165773Pylaiella littoralis U1_48CDSP-littoralis_Contig69 165474..165773 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig69.41.1

>prot_P-littoralis_Contig69.41.1 ID=prot_P-littoralis_Contig69.41.1|Name=mRNA_P-littoralis_Contig69.41.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=305bp
MLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGF
NRRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQ
AICDARYRIRAWTTNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAY
PGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKP
LELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGE
FSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNK
DRKR*
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mRNA from alignment at P-littoralis_Contig69:162818..166648-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig69.41.1 ID=mRNA_P-littoralis_Contig69.41.1|Name=mRNA_P-littoralis_Contig69.41.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3831bp|location=Sequence derived from alignment at P-littoralis_Contig69:162818..166648- (Pylaiella littoralis U1_48)
TTAACGCGTTTCTGCTGCGAGGAGCTGGAGCAGCGGAATAGAGGATATAA CGCCAAAAATGATGTAAACCCAGAGCGCGCGGGGCCCAATTTCAAAAAAC GCGGTGGAATGCAGCTCGCGGTACGTACAGCGCACGCCACGACCAGCTCT CGGCAACAACACGGCCATCCTGCTCGACCATGGGGCCTCCTCCTAGCTCA AGAACCAAGCGCCTTCGCCGTTTGGCGAAGTTGACGGCAATGTTAACGCA GCTGCTGGATCTGCTGACTTTGTTGGACAAGCTGGAATCGTTGGACAAGC ATCAGAAACCGAAGCACCGCAGCACGCTGATCCGGCGTCAAAGACGAAGC TGGGCGGCTTACAGCAAGCCCCTCCTGGCGGACGGGACCTTCAGATCGAG TTTCCGCATGGACCACGACGACTTCATGGACCTGGTGGATATGCTCCGCC CTGAACTGGAGAGAAACCCTCACATGGGGAGCCTTCGCAACGGTGCGGTC CCTGTAGAGTGTGTGTGTGTTGTCATCCCATATTCTCTGGCACACTAGTC TGCACCCTGCGGTTCAAACTACAGGCTAGGCCCATCGACGGGGTCACACA GGAGGAAGGTCAACACAGGAGGAGTTACCCCCACCTTCCTTCTGCGGTAC ATGCGTGAGATTTTTTCTCGCGAGCAGGGATCCGCGGTCCCTACCTTCGT CGGCGAAGCCGAATCTGCTTTTACTAACAGCATAGCCGCTTTCAAAGTAG CAAAGGAACACATTCACCGGGAATCGAACCCCCGTTCCTCTGCATCTAGT GGTTAACGAGGGGACCACTGGTCCACCGGGGCGTACCAGGTCGGGAATAC TCTGCGGTGGTTGGCTGGTGGTCAAATGCTCGACATCAAGCAAGGCCATG TGATCGCGAAGAGCACGGCGTACCAGACGGCCGTCCGTGTCATCAAGGCG ATCAATGCCTGTGAGGCGCTGGAATGCCGATGGCCCGAGAAACAGACGGA TTACGACAGCATCGCGGCCGGGTTCAACCGCCGCAGCACGAACGGTGTGA TCGCCAAGTGCGTGGGAGCCATGGACGGGCTTTTCGTCCGCACCCTGAGG CCGAACTCCCGGGACACACATGAGCCCAACTCCTTCTACAGTGGCCACAA GAAGGGTTTCGGGATGAACTTCCAGGCAAGAACAATGATTAAGCGCCTAC TTGGTTGGGGGTGCTGCTATTTTTTTTTTGATACGGGATGAAACATTGGG AATCATGTGCCCCGAACGCCGCTGCGGCAGCAGCAGATTTTGCCGGTGCT GTTTGCTGTAATTGTTGTAGATTATCACATTAGCTCACTACCGCCGCAGT CTCGCCCGTGGTCACAAACCAGTCACATATCGTGCTAGGAGAAATAAAAA CCAAATAAATGGACCGTGATCACCCACAGTCAAATCAGAGAGGGTACCGT TGGGGTACCATCTGTGGTGGCCAAAGTATCAAACAAAATACAGAAAAAAA TAGGTTCGACAGAAAAAAACAAAAAAGGACCAACAAAAAATTGTAAACAG TACGACGAAAAACAAAACAAAAACAAAAACAAGACAAACCTCAACCATAA CCAAAAACTTCGAAGTACTTCGTACATCGAACCAGGGCCCAGGGCCATGA CAGACCAAGGCAAAGGCTGTAATACCATGAGGGGGTGCAGATCTCGGGAA TGTTGCGGAGGTATCACATGTTTCGGACATAATAATTTAACACAACGTGA CTCCCGTGATATATGCTGCGTAATTTTCAAGCAGCGTTGTCGACGTAGGT CACATACCACGTTGTCCCACGTCAGCGACGAAGTTCATCGTCACAGCGCG TGACATGTGCTGCGGCCGAAATAAATTTTGTTGGCGGTGAATGCACAGGG TTGAAGTTGTCCGTAGTACAGCAGCGGTACGGAGCCTTTTCTGAATCTTT GTCGGCGTCGTGCACAGGAAAGTATATTTTCGTACGACGTTCGTACAATG CAGTGGAGGCGCTTGCTACTGTTGTGCGTTCCCTCGCATCTGACACCATC TACGCACAAACTCGATGTTGCTCTGTTGAACAGGCTATCTGCGACGCGCG ATACAGGATTAGGGCATGGACTACGAACTGCCCGGGAAGCCAAAACGACC GCACGGCCTTTAAGGTTTCCGGCTTCCCCAAGCTCCTCGAAGCTTTGCCG AAAGGTTACTACATCGTGGGGGACGCGGCGTACCCGGGTTCGGACGTCGT TCTCGTTCCGTACCCGGGAACGAAGGTGTCGGATAGCCAGGATGCGTTGA ACTACTACCTGTCTCAGTGCAGGATTGCCATCGAGCAGACGTTCGGGATC CTGGTGAGTATCAAGTGTCAACTTCTGTGTTCGCATAGAACGGGTGCTGT TGTTGTCGGATACTATTTTGTTCTCGTGCACGTAAAAATTAGGTTTTACG TGTGGGTCTGCACGGGGTGATTTCTTCGGAACAGTCTTGTTGCGTGAGTT TTGCTGAACCTTATAGATCACGAGCACACGAGCAGGTTTCTATATCATTC ATTCTTGACTGTCCACCTATTTTTGGCGTTTCTCTTGATGATATGTAGGT CAGGAGGTGGGGCATCCTCTGGAAGCCGTTGGAGCTCCGGCTGGGCAACG TTGCCCCGCTTGTCGAGAGTCTCGTTCGCCTGCACAACTTCTGCCGAGAC CGAAAGGTGGAGGTGCCAACGGCGGAGGCTGGAGACGTTCGTATCCCCAG CAACATCGGCTTCAACCAAAGCGGAGAGTTCAGCAACGACTTTTTCGAAA CCGAGCCCTCCTCGTCTGGTCGCCCGGCGAGAAACCAGGCTCGGGTGTCG GCTCCCCGGGAGGACATCCGCCGACAGCTCGAACAACTAGGCATGGGGCG GCCGGCGCACAACATTTCTAGGAACAAAGACCGCAAGCGGTGAATCGTTG AACTGATTGTGTCGAGGGCACGGTGTTCGTCGCAGTCTACGTTTGGGATG GGGGTATTGCTTATCTGTCCTCTCGGTTTGAGTGCAGGTCGCGGTAGGTA GGCGCGTGCGCTCGGCCTATGGGGTAATGCCCCAGATAACCTCTGCCACG TCGAGGAAAGGAAACTCACATGGGTGGACTTTCTTTGTCTCTTTGGTTTT GGAACGGGCTTTGTGTGTCTCAAGTTGCTTTGTCGTCCCCTTACGGCTTC CTCTTCAAATTTTTCTAATGCTCACACCTCTATATGTTGTGTGTGTTGGG ACAGTATTCATGTATTGTATATTGTCGCGGAGGTCTGCTGTGTTGATTGT GAGGAAGATCAATTACCTTGGATAGCCTTTGTGAAGTCTGTGTCGTCCTA ACTTTCACGCTTTCATTTTGTTTTATCTTAATATGCGAGTTTGTGGTATT AAGACCCGCTCATGCGTGGCGTGGCGGGATTCGGATGCGGAATGCACCAG TGGAGGTTGTTGATGGTGTCTGGGAAATTCCTTCCATGGTCCGCCCCCGA ATGGACTTGTTCTGCACGGCAGCATCAGCGTACGTATGTGTGTGGCATGT GTTTATCGGTCTTTGTTCGGTCTGGCGTATTTTTCTTGGGGTCTTGGAAT GGTTGTGACCGGGGGTTGTTTCCCCCTTTCCAAAAGTCCCGCATGGTTAT GTGATTATGCAGTGTTGAACGATTCTGGCCACCGAATGAGCAAGCTGAGC TAATGCTGCCCTTTGTGTCTTAATTTGTCATGTGCCCCCTCTCGTGGGCT CCTGCAACCTCGTTGTGGTCAAGAGAGGGGGGGCAGCTGCTGCTGGGACT GTTGACGCCCCTCGCACCGCTATCAGATACT
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Coding sequence (CDS) from alignment at P-littoralis_Contig69:162818..166648-

>mRNA_P-littoralis_Contig69.41.1 ID=mRNA_P-littoralis_Contig69.41.1|Name=mRNA_P-littoralis_Contig69.41.1|organism=Pylaiella littoralis U1_48|type=CDS|length=915bp|location=Sequence derived from alignment at P-littoralis_Contig69:162818..166648- (Pylaiella littoralis U1_48)
ATGCTCGACATCAAGCAAGGCCATGTGATCGCGAAGAGCACGGCGTACCA
GACGGCCGTCCGTGTCATCAAGGCGATCAATGCCTGTGAGGCGCTGGAAT
GCCGATGGCCCGAGAAACAGACGGATTACGACAGCATCGCGGCCGGGTTC
AACCGCCGCAGCACGAACGGTGTGATCGCCAAGTGCGTGGGAGCCATGGA
CGGGCTTTTCGTCCGCACCCTGAGGCCGAACTCCCGGGACACACATGAGC
CCAACTCCTTCTACAGTGGCCACAAGAAGGGTTTCGGGATGAACTTCCAG
GCTATCTGCGACGCGCGATACAGGATTAGGGCATGGACTACGAACTGCCC
GGGAAGCCAAAACGACCGCACGGCCTTTAAGGTTTCCGGCTTCCCCAAGC
TCCTCGAAGCTTTGCCGAAAGGTTACTACATCGTGGGGGACGCGGCGTAC
CCGGGTTCGGACGTCGTTCTCGTTCCGTACCCGGGAACGAAGGTGTCGGA
TAGCCAGGATGCGTTGAACTACTACCTGTCTCAGTGCAGGATTGCCATCG
AGCAGACGTTCGGGATCCTGGTCAGGAGGTGGGGCATCCTCTGGAAGCCG
TTGGAGCTCCGGCTGGGCAACGTTGCCCCGCTTGTCGAGAGTCTCGTTCG
CCTGCACAACTTCTGCCGAGACCGAAAGGTGGAGGTGCCAACGGCGGAGG
CTGGAGACGTTCGTATCCCCAGCAACATCGGCTTCAACCAAAGCGGAGAG
TTCAGCAACGACTTTTTCGAAACCGAGCCCTCCTCGTCTGGTCGCCCGGC
GAGAAACCAGGCTCGGGTGTCGGCTCCCCGGGAGGACATCCGCCGACAGC
TCGAACAACTAGGCATGGGGCGGCCGGCGCACAACATTTCTAGGAACAAA
GACCGCAAGCGGTGA
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