mRNA_P-littoralis_Contig69.32.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig69.32.3
Unique NamemRNA_P-littoralis_Contig69.32.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig69.32.3 vs. uniprot
Match: D8LTP5_ECTSI (Vanadium-dependent bromoperoxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP5_ECTSI)

HSP 1 Score: 1059 bits (2739), Expect = 0.000e+0
Identity = 525/655 (80.15%), Postives = 574/655 (87.63%), Query Frame = 3
Query:   99 MKVFVGMAALLVASPPCLGQETSTEHQPTHPLLSGSVCRVRDSLDFLSPTERAKVTLLKRVNAAKDEFHVGPTCHITNGDEESVPNFIGQFHKSLPHDEYGTVEPSAYQKLLDCAFSADINVCDQVPSGAASKGAKMINPLGGTAHQIDGADSDNVFITTPDGVLSEELAAQMAEVYWMALARDVPFSQFGQDNLIRAAAENLERLPAFKGLNIPKGEDGKIDPAQDLFRTDWPGVTAGPVVSQFLLSNFTIDNIVVQPRQVTLVEGVDYMTTVQDWLDVQAMYLNGASSVKTEFVDPEKPLFIRNGRDLAAIAFGDLLYTEAFRAALIMFNHTILSSAGGPYTDSERQVGFATFGEPHILTALAASSSSTRNAWYAKWQVHRVLRPEAYGGLVHNTMSHRLKTPLPNSLLQNTELLNRVRNHNIENNGRG-GGQREVTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLETLKVSNDEGTELIDYVPGAGDRCIDANGREVGGLTYEGELNKVASNVIIGRSHLGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARAKDSSSQSAYGNNPIPPASYEFRLYSGKVLKLYAGDLYKLDGKLCKGAYTGDDFCDEVQESTHDLNDLIREGGDFAFHSEL 2060
            MK FVG+AALL ASPPCLG  ++ EHQPTHPLLSGSVCRVRDSLDFLSPTERAKVTL KRV+ AK+EF VGPTCHITNGDE +VP+FIGQFHKSLPHD++GTV  ++YQKLLDC FSAD+NVCDQVPSGA+++GAKMINPLGGTAHQ+DGADSDNVFITTPDGVLSEELAAQMAEVYWMAL RD+PFS+F  ++L+RAAAENLERLPAFKGLNIPK   GKIDP QDLFRTDWPGVTAGPVVSQ LLS+F IDNIVV P+QVTLV+ +DYMTT QDWLDVQ    NGAS VKTEFVD +KPLFIRNGRDLAA+AF DLLYTEAFRAAL+MF   ILSSA GPY+ SERQVGFATFGEPHILT+LAASSSSTR+AWYAKWQVHRVLRPEAYGGLVHNT++ RL TPLP ++LQNTELLNRVR HN + NG G GG  + TYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYL  L VSNDEGT+ I+YVP  G+ CID NGREV GLTYEGELNKVASNVIIGRSH+GVHYRMDGVYGALMGETSAVRRLQQELPNLSEAR    S         IPPASY+FRLYSGKVL+L A D++KLDG+ CKG YTGDDFCDE Q+  H L  L+ +GGDFAFH EL
Sbjct:    1 MKAFVGIAALLAASPPCLGATSNEEHQPTHPLLSGSVCRVRDSLDFLSPTERAKVTLQKRVDTAKEEFQVGPTCHITNGDETNVPDFIGQFHKSLPHDKFGTVSKTSYQKLLDCVFSADVNVCDQVPSGASARGAKMINPLGGTAHQVDGADSDNVFITTPDGVLSEELAAQMAEVYWMALTRDIPFSEFATNSLVRAAAENLERLPAFKGLNIPKSAGGKIDPVQDLFRTDWPGVTAGPVVSQLLLSDFAIDNIVVPPKQVTLVKEMDYMTTFQDWLDVQ----NGASKVKTEFVDEDKPLFIRNGRDLAALAFTDLLYTEAFRAALVMFRQGILSSAEGPYSTSERQVGFATFGEPHILTSLAASSSSTRHAWYAKWQVHRVLRPEAYGGLVHNTLTGRLHTPLPKAILQNTELLNRVRTHNAKCNGDGKGGHGDGTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLGDLVVSNDEGTKRIEYVPRKGETCIDQNGREVQGLTYEGELNKVASNVIIGRSHIGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARDTKGS---------IPPASYKFRLYSGKVLELLAKDIFKLDGRTCKGLYTGDDFCDEHQDGGHYLEHLVNKGGDFAFHVEL 642          
BLAST of mRNA_P-littoralis_Contig69.32.3 vs. uniprot
Match: A0A3G3BM34_SACJA (Vanadium-dependent bromine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM34_SACJA)

HSP 1 Score: 868 bits (2242), Expect = 3.200e-304
Identity = 436/657 (66.36%), Postives = 514/657 (78.23%), Query Frame = 3
Query:  102 KVFVGMAALLVASPPCLGQETSTEHQPTHPLLSGSVCRVRDSLDFLSPTERAKVTLLKRVNAAKDEFHVGPTCHITNGDEESVPNFIGQFHKSLPHDEYGTVEPSAYQKLLDCAFSADINVCDQVPSGAASKGAKMINPLGGTAHQIDGADSDNVFITTPDGVLSEELAAQMAEVYWMALARDVPFSQFGQDNLIRAAAENLERLPAFKGLNIPKGEDGKIDPAQDLFRTDWPGVTAGPVVSQFLLSNFTIDNIVVQPRQVTLVEGVDYMTTVQDWLDVQAMYLNGASSVKTEFVDPEKPLFIRNGRDLAAIAFGDLLYTEAFRAALIMFNHTILSSAGGPYTDSERQVGFATFGEPHILTALAASSSSTRNAWYAKWQVHRVLRPEAYGGLVHNTMSHRLKTPLPNSLLQNTELLNRVRNHNIENNGRGGGQREVTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLETLKVSNDEGTELIDYVPGAGD---RCIDANGREVGGLTYEGELNKVASNVIIGRSHLGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARAKDSSSQSAYGNNPIPPASYEFRLYSGKVLKLYAGDLYKLDGKLCKGAYTGDDFCDEVQESTHD-LNDLIREGGDFAFHSEL 2060
            + FVG+ ALL A PPCLG +   E  PT PLLSGSVCRVRDSLDFL P  RAKVTLLKR+  AKDEF VGPTCHI NGDEE+VP F GQFHK+LPHD++G V+  AY+KL +C F++DINVCD VPSGA   GAK+ NPLGGTAHQ+ GADSDN+FI TPD +LSE LAAQ +EVYWMALARD+PF +F  ++LIR AAENL+ LPAFKGLNIP+ + GKIDP  DLFRT WPGVT GPVVSQF+LS+F ID+I V P+   L    DYMT+ Q WLDVQ    NGAS V T F D E P FIRNGRDLA I+F DLLYTEAFRAALI+F    L  + GPY ++ERQ GFATFG PHILTA+ ++SSSTR+AWY KWQVHR+LRPEAYGGLVHNT+   + TPLP+S+L+NTELLNRV  HN + NG G    E T+LLPMA A+GSP HPAYPSGHAIN+GAYIT+LKAFLGFE GQRC+ + + VSN+EGTE I YVP   +    CI+  G++V GLTYEGELNKV++NV+IGRSHLGVH+RMDGVYGAL+GE SAVRRLQQELP L+EAR  D   +       IPPA+Y FRLYSGK+L+LY  +LYKLDGKLC+GA+TGDDFCDEVQE  ++    ++ +   F+ H+EL
Sbjct:   39 QTFVGLTALLAAFPPCLGYDEPAE--PTQPLLSGSVCRVRDSLDFLDPVPRAKVTLLKRLAIAKDEFSVGPTCHINNGDEENVPLFAGQFHKTLPHDKFGQVDEDAYKKLQECIFTSDINVCDDVPSGAKKNGAKLTNPLGGTAHQVAGADSDNIFIPTPDSLLSERLAAQQSEVYWMALARDIPFGEFATNDLIRLAAENLQGLPAFKGLNIPRSKGGKIDPVTDLFRTTWPGVTTGPVVSQFMLSDFLIDSINVTPKADPLTPFTDYMTSFQPWLDVQ----NGASDVDTTF-DSENPRFIRNGRDLATISFRDLLYTEAFRAALILFTQGALGGSIGPYEEAERQQGFATFGAPHILTAMGSASSSTRHAWYQKWQVHRMLRPEAYGGLVHNTLMKNVITPLPDSILRNTELLNRVEVHNQKMNGDG----EKTFLLPMASAQGSPTHPAYPSGHAINVGAYITSLKAFLGFEAGQRCFPDPV-VSNNEGTERIPYVPSGREIVGECINDKGKKVDGLTYEGELNKVSANVLIGRSHLGVHWRMDGVYGALVGEVSAVRRLQQELPGLAEARPNDDLKR-----KEIPPATYNFRLYSGKMLELYGANLYKLDGKLCEGAFTGDDFCDEVQEDDYESFEHIVEDLAKFSLHTEL 678          
BLAST of mRNA_P-littoralis_Contig69.32.3 vs. uniprot
Match: Q7X9V0_9PHAE (Vanadium-dependent bromoperoxidase 2 n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7X9V0_9PHAE)

HSP 1 Score: 841 bits (2173), Expect = 1.010e-293
Identity = 421/652 (64.57%), Postives = 502/652 (76.99%), Query Frame = 3
Query:  111 VGMAALLVASPPCLGQETSTEHQPTHPLLSGSVCRVRDSLDFLSPTERAKVTLLKRVNAAKDEFHVGPTCHITNGDEESVPNFIGQFHKSLPHDEYGTVEPSAYQKLLDCAFSADINVCDQVPSGAASKG-AKMINPLGGTAHQIDGADSDNVFITTPDGVLSEELAAQMAEVYWMALARDVPFSQFGQDNLIRAAAENLERLPAFKGLNIPKGEDGKIDPAQDLFRTDWPGVTAGPVVSQFLLSNFTIDNIVVQPRQVTLVEGVDYMTTVQDWLDVQAMYLNGASSVKTEFVDPEKPLFIRNGRDLAAIAFGDLLYTEAFRAALIMFNHTILSSAGGPYTDSERQVGFATFGEPHILTALAASSSSTRNAWYAKWQVHRVLRPEAYGGLVHNTMSHRLKTPLPNSLLQNTELLNRVRNHNIENNGRGGGQREVTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLETLKVSNDEGTELIDYVPGAGD---RCIDANGREVGGLTYEGELNKVASNVIIGRSHLGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARAKDSSSQSAYGNNPIPPASYEFRLYSGKVLKLYAGDLYKLDGKLCKGAYTGDDFCDEVQESTHD-LNDLIREGGDFAFH 2051
            +G+ ALL A  PCLG E   E  PT PLLSG+VCRVRDSLDFL P  RAKVTLLKR+  AKDE  VGPTCH+ NGDEE+VP F GQ+HK+LPHD++G V+  AY+KLL+C F++DIN C++VPSGA  +G AK+ NPLGGTAHQ+ GADSDNVFITTPD +LSE LAAQ AEVYWMAL RD+PF +F +++ +R AAENL+ LPAFKGLNIP+ E GKIDP  DLFRT WPGVT GPVVSQF+LS+F ID+I V P+   L  GVDYMT  Q WLDVQ    NGAS ++T F D E P FIRNGRDLA IA  D LYTEAFRAALI+F    L    GPY ++ERQ GFATFGEPHILTA+A++SSSTR+AWYAKWQVHR+LRPEAYG LVHNT+   + TPLP+S+L+NTELLNRV  HN   N  G    E T+LLPMA A+GSP HPAYPSGHAIN GAYIT LKAFLG+E GQ+C+   + VSNDEGT+ I Y P   +    C++  G+ V GLTYEGELNK+++NV++GRSH+GVH+RMDGVYGALMGETS VRRLQQELP L EAR  +   +       IPPA+Y+FRLYSGK+L+LY  +LYKLDGKLC+GA+TGDDFCD + E  +   +D++ E   F+ H
Sbjct:   42 LGLTALLAAFAPCLGYEEPPE--PTQPLLSGNVCRVRDSLDFLDPVPRAKVTLLKRLAIAKDEISVGPTCHVNNGDEENVPLFAGQYHKTLPHDKFGQVDEDAYKKLLECVFTSDINECEKVPSGAGRRGGAKLTNPLGGTAHQVTGADSDNVFITTPDSLLSERLAAQQAEVYWMALLRDIPFGEFAKNDYVRLAAENLQSLPAFKGLNIPRSEGGKIDPVTDLFRTTWPGVTTGPVVSQFMLSDFLIDSIKVTPKADPLTPGVDYMTAFQPWLDVQ----NGASKLETTF-DEENPRFIRNGRDLATIALRDQLYTEAFRAALILFTEGALGGEVGPYAEAERQQGFATFGEPHILTAMASASSSTRHAWYAKWQVHRMLRPEAYGALVHNTLMRDVITPLPDSILRNTELLNRVEVHNQRMNPDG----EKTFLLPMAAAQGSPTHPAYPSGHAINNGAYITALKAFLGYEAGQKCFPNPV-VSNDEGTKRIKYKPSGREIVGECVNEKGKLVEGLTYEGELNKISANVLLGRSHIGVHWRMDGVYGALMGETSCVRRLQQELPGLPEAREVEGKKR----RGDIPPATYKFRLYSGKILELYGRNLYKLDGKLCEGAFTGDDFCDPIDEDDYSSFDDIVEEHAQFSLH 677          
BLAST of mRNA_P-littoralis_Contig69.32.3 vs. uniprot
Match: B7ZGM1_9PHAE (Putative vanadium-dependent bromoperoxidase 3 n=4 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM1_9PHAE)

HSP 1 Score: 835 bits (2156), Expect = 9.780e-292
Identity = 422/659 (64.04%), Postives = 503/659 (76.33%), Query Frame = 3
Query:   99 MKVFVGMAALLVASPPCLGQETSTEHQPTHPLLSGSVCRVRDSLDFLSPTERAKVTLLKRVNAAKDEFHVGPTCHITNGDEESVPNFIGQFHKSLPHDEYGTVEPSAYQKLLDCAFSADINVCDQVPSGAASKG-AKMINPLGGTAHQIDGADSDNVFITTPDGVLSEELAAQMAEVYWMALARDVPFSQFGQDNLIRAAAENLERLPAFKGLNIPKGEDGKIDPAQDLFRTDWPGVTAGPVVSQFLLSNFTIDNIVVQPRQVTLVEGVDYMTTVQDWLDVQAMYLNGASSVKTEFVDPEKPLFIRNGRDLAAIAFGDLLYTEAFRAALIMFNHTILSSAGGPYTDSERQVGFATFGEPHILTALAASSSSTRNAWYAKWQVHRVLRPEAYGGLVHNTMSHRLKTPLPNSLLQNTELLNRVRNHNIENNGRGGGQREVTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLETLKVSNDEGTELIDYVPGAGD---RCIDANGREVGGLTYEGELNKVASNVIIGRSHLGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARAKDSSSQSAYGNNPIPPASYEFRLYSGKVLKLYAGDLYKLDGKLCKGAYTGDDFCDEVQESTHD-LNDLIREGGDFAFHSEL 2060
            MK FVG+ ALL A PPC       E + T PLLSGSVCRVRDSLDFL P +RA VTL KR+  AK+EF VGPTCHITNGDEE VP F GQ+HKSLPHD++G V+ + YQKLLDC F++DINVCD+VPSGAA  G AK++NP+GGTAHQ  GADSD+VFITTPD +LSE LAAQ  EVYWMAL RDVPF+QFG D L++ AAENL  LP FKGL+IP+  DG IDP   LFRT+WPGVTAGPVVSQ +L++F ID+I+V P  VTLV  +DYMT  Q WLDVQ    NG S V TEF+DP +PLFIRNGRDLA ++F D LYTEAFRAALI+F+ ++L  + GPY +S RQ GF TFGE HIL A+A+SSSSTR+AWY KWQVHRVLRP+AYGGL+HNT+   + TPLP S+L NT+LL+RV  +NI  N  G    E T+LLPMA A+GSP HPAYPSGHAINLG YITTLKAF+GFE GQ+C+   L  S+D G   + YVP   +    C+D +G +  GLT EGELNKVASNVIIGRSHLGVH+RMDGV GALMGETSAVRRLQQEL  L EAR  D +      ++ IPPA+Y+FRLYSGK+L+++   LY+LDG+LCKGAYTGDDFC+ V E   +   D+++     + H+EL
Sbjct:    1 MKSFVGLTALLAAFPPCFAAGDHDEVRATLPLLSGSVCRVRDSLDFLDPVQRATVTLEKRLAIAKNEFGVGPTCHITNGDEEDVPLFAGQYHKSLPHDKFGQVDAADYQKLLDCVFTSDINVCDKVPSGAAGGGGAKLVNPIGGTAHQTTGADSDSVFITTPDALLSERLAAQQTEVYWMALTRDVPFNQFGNDGLVQIAAENLAALPEFKGLSIPRNADGTIDPVTQLFRTEWPGVTAGPVVSQLMLADFVIDSIIVPPTAVTLVPRMDYMTAFQPWLDVQ----NGDSDVVTEFIDPAEPLFIRNGRDLANLSFNDQLYTEAFRAALILFSESVLGGSIGPYAESLRQQGFTTFGESHILAAMASSSSSTRHAWYTKWQVHRVLRPQAYGGLLHNTLMKDVITPLPQSILGNTDLLSRVAANNIRMNPDG----EKTFLLPMATAQGSPNHPAYPSGHAINLGGYITTLKAFVGFEAGQKCF-PNLVESDDGGLARVPYVPTGTEFLEDCVDKDGNKTTGLTIEGELNKVASNVIIGRSHLGVHWRMDGVSGALMGETSAVRRLQQELSGLPEARVVDGAR-----SDDIPPATYKFRLYSGKMLEIFGVTLYRLDGQLCKGAYTGDDFCNVVNEDKFETFEDIVKHSATVSVHTEL 645          
BLAST of mRNA_P-littoralis_Contig69.32.3 vs. uniprot
Match: A0A411NJW8_SACJA (Vanadium-dependent bromoperoxidase (Fragment) n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A411NJW8_SACJA)

HSP 1 Score: 828 bits (2138), Expect = 2.520e-288
Identity = 424/666 (63.66%), Postives = 505/666 (75.83%), Query Frame = 3
Query:   99 MKVFVGMAALLVASPPCLGQETSTEHQPTHPLLSGSVCRVRDSLDFLSPTERAKVTLLKRVNAAKDEFHVGPTCHITNGDEESVPNFI-GQFHKSLPHDEYGTVEPSAYQKLLDCAFSADINVCDQVPSGAASKGAKMINPLGGTAHQIDGADSDNVFITTPDGVLSEELAAQMAEVYWMALARDVPFSQFGQDNLIRAAAENLERLPAFKGLNIPK-----GEDG--KIDPAQDLFRTDWPGVTAGPVVSQFLLSNFTIDNIVVQPRQVTLVEGVDYMTTVQDWLDVQAMYLNGASSVKTEFVDPEKPLFIRNGRDLAAIAFGDLLYTEAFRAALIMFNHTILSSAGGPYTDSERQVGFATFGEPHILTALAASSSSTRNAWYAKWQVHRVLRPEAYGGLVHNTMSHRLKTPLPNSLLQNTELLNRVRNHNIENNGRGGGQREVTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLETLKVSNDEGTELIDYVPGAGD---RCIDANGREVGGLTYEGELNKVASNVIIGRSHLGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARAKDSSSQSAYGNNPIPPASYEFRLYSGKVLKLYAGDLYKLDGKLCKGAYTGDDFCDEVQESTHD-LNDLIREGGDFAFHSEL 2060
            MK FVG+ ALL A PPCLG   S E Q      SG VC VRDSLDFL P +RA+VT   R+  A+DEF VGPTCH+TNGDE++    + GQ+HK+LPH++YG V    YQKLLDC  ++DINVCD VP+G +   AK+ NPLGGTAHQ+DGADSDNVFI TPD +LSE LAAQ  EVYWMALARD+PFSQF  D+L R AAENL    AF GLNIP+     G+D   K+DPA +LFRTDWPGVT GP+VSQFLLS+F  D+I V+P+   L  GVDYMT+ Q WLDVQ    NGAS V T  +D E P FIRNGRDLA+IAF DLLYTEAFRAALI+F    L  + GPY ++ERQ GFATFG PHILTA+ ++SSSTR+AWY KWQVHR+LRPEAYGGLVHNT+   + TPLP+S+L+NTELLNRV  HN + NG G    E T+LLPMA A+GSP HPAYPSGHAIN+GAYIT+LKAFLGFE GQRC+ + + VSN+EGTE I YVP   +    CI+  G++V GLTYEGELNKV++NV+IGRSHLGVH+RMDGVYGAL+GE SAVRRLQQELP L+EAR  D   +       IPPA+Y FRLYSGK+L+LY  +LYKLDGKLC+GA+TGDDFCDEVQE  ++    ++ +   F+ H+EL
Sbjct:   42 MKTFVGLTALLAAFPPCLGAGDSNETQANKSPASGDVCNVRDSLDFLDPVQRAEVTRANRLAIAEDEFKVGPTCHLTNGDEDNETLLLAGQYHKTLPHNKYGQVNKDDYQKLLDCVRTSDINVCDNVPAGGS---AKLTNPLGGTAHQVDGADSDNVFIATPDSLLSERLAAQQTEVYWMALARDIPFSQFATDDLTRLAAENLGNNEAFNGLNIPRTKVGNGDDNETKVDPATNLFRTDWPGVTTGPMVSQFLLSDFEYDSIDVEPKAAPLAPGVDYMTSFQPWLDVQ----NGASDVDT-IIDKENPRFIRNGRDLASIAFRDLLYTEAFRAALILFTQGALGGSIGPYEEAERQQGFATFGAPHILTAMGSASSSTRHAWYQKWQVHRMLRPEAYGGLVHNTLMKNVITPLPDSILRNTELLNRVEVHNQKMNGDG----EKTFLLPMASAQGSPTHPAYPSGHAINVGAYITSLKAFLGFEAGQRCFPDPV-VSNNEGTERIPYVPSGREIVGECINDKGKKVDGLTYEGELNKVSANVLIGRSHLGVHWRMDGVYGALVGEVSAVRRLQQELPGLAEARPNDDLKR-----KEIPPATYNFRLYSGKMLELYGANLYKLDGKLCEGAFTGDDFCDEVQEDDYESFEHIVEDLAKFSLHTEL 689          
BLAST of mRNA_P-littoralis_Contig69.32.3 vs. uniprot
Match: K7ZUA3_ASCNO (Vanadium-dependent bromoperoxidase 2 n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=K7ZUA3_ASCNO)

HSP 1 Score: 768 bits (1982), Expect = 1.630e-265
Identity = 398/650 (61.23%), Postives = 477/650 (73.38%), Query Frame = 3
Query:   96 IMKVFVGM-AALLVASPPCLGQETST-EHQPTHPLLSGSVCRVRDSLDFLSPTERAKVTLLKRVNAAKDEFHVGPTCHITNGDEESVPNFIGQFHKSLPHDEYGTVEPSAYQKLLDCAFSADINVCDQVPSGAASKGAKMINPLGGTAHQIDGADSDNVFITTPDGVLSEELAAQMAEVYWMALARDVPFSQFGQDNLIRAAAENLERLPAFKGLNIPKGEDGKIDPAQDLFRTDWPGVTAGPVVSQFLLSNFTIDNIVVQPRQVTLVEGVDYMTTVQDWLDVQAMYLNGASSVKTEFVDPEKPLFIRNGRDLAAIAFGDLLYTEAFRAALIMFNHTILSSAGGPYTDSERQVGFATFGEPHILTALAASSSSTRNAWYAKWQVHRVLRPEAYGGLVHNTMSHRLK-TPLPNSLLQNTELLNRVRNHNIENNGRGGGQREVTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLETLKVSNDEGTELIDYVPGAGDR---CIDANGREVGGLTYEGELNKVASNVIIGRSHLGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARAKDSSSQSAYGNNPIPPASYEFRLYSGKVLKLYAGDLYKLDGKLCKGAYTGDDFCDEV-QESTHDLNDLI 2024
            +MK   G+  ALL A PPCL Q  +      T PLLSGSVCRVRD++DFLSPT+RAK+T  +R+  A  E  VGPTCH+ NGDE +VP F GQFHKSLPHD+ G V P AYQ LLDC  S DINVCDQVPSG  S G K++NPLGG  HQ+DGADSDN+FI  PD +LSE LAAQ AEVYWMAL RD+PFSQFG +N ++ AA NL+   AF GL+I +  DG IDP QDLFRTDWPGV++GP+VSQF+L+NF ID IVV+P+  TLV  ++YMT V  WL++Q    NG     T FVD  +PLFIRNGRDLAA++F D+LYTEAFR  LI+FN +IL+ AG PY  S RQ GF T G  H + A+AA SSSTR+AWYAKWQVHRVLRPEAYGGL+H  +++ +   PLP S++ NTELLN V + N   NG   G  +V +LLPMAV EGSPVHPAYPSGHAINLGAY+T LKAFLGFELGQRC+   + +SND GT+ I +VP  GDR   CI+ +G E  GLTYEGELNKV SNV IGRSHLGVH+RMDGV+GA MGE  A+RRLQQEL  L EAR  +          PIPPASY+FRLYSG +++L+  + Y L  ++CKG +TGDDFC    +E T +L DL+
Sbjct:    1 MMKASGGIITALLAAFPPCLSQTVNELADMQTRPLLSGSVCRVRDTVDFLSPTKRAKITFKRRIGIAAGELAVGPTCHLNNGDEANVPLFDGQFHKSLPHDDVGRVNPEAYQLLLDCIESNDINVCDQVPSGVESDGRKLVNPLGGGGHQVDGADSDNIFIKQPDNLLSERLAAQQAEVYWMALLRDIPFSQFGTNNTVQMAAANLQGFDAFNGLSISRDADGNIDPMQDLFRTDWPGVSSGPMVSQFMLANFDIDGIVVEPKAKTLVPEMEYMTGVDTWLNIQ----NGGPPEDTLFVD--EPLFIRNGRDLAALSFNDVLYTEAFRTILILFNESILAEAG-PYGSSTRQEGFTTLGTSHYIHAMAAGSSSTRHAWYAKWQVHRVLRPEAYGGLLHFVINNLIDDVPLPASIVSNTELLNAVESLNQAQNG---GTNQV-FLLPMAVGEGSPVHPAYPSGHAINLGAYLTVLKAFLGFELGQRCFPSPM-ISNDAGTDRIPFVPSDGDRVGTCINEDGEEEVGLTYEGELNKVTSNVAIGRSHLGVHWRMDGVFGAEMGEAGAIRRLQQELGGLPEARDTE---------GPIPPASYKFRLYSGTMIELFPDNRYMLGDQMCKGFFTGDDFCVPADEEETAELEDLV 629          
BLAST of mRNA_P-littoralis_Contig69.32.3 vs. uniprot
Match: B7ZGM5_9PHAE (Putative vanadium-dependent bromoperoxidase 7 (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM5_9PHAE)

HSP 1 Score: 532 bits (1371), Expect = 5.750e-177
Identity = 272/440 (61.82%), Postives = 333/440 (75.68%), Query Frame = 3
Query:  753 DGKIDPAQDLFRTDWPGVTAGPVVSQFLLSNFTIDNIVVQPRQVTLVEGVDYMTTVQDWLDVQAMYLNGASSVKTEFVDPEKPLFIRNGRDLAAIAFGDLLYTEAFRAALIMFNHTILSSAGGPYTDSERQVGFATFGEPHILTALAASSSSTRNAWYAKWQVHRVLRPEAYGGLVHNTMSHRLKTPLPNSLLQNTELLNRVRNHNIENNGRGGGQREVTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLETLKVSNDEGTELIDYVPGAGD---RCIDANGREVGGLTYEGELNKVASNVIIGRSHLGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARAKDSSSQSAYGNNPIPPASYEFRLYSGKVLKLYAGDLYKLDGKLCKGAYTGDDFCDEVQESTHD-LNDLIREGGDFAFHSEL 2060
            DG IDP   LFRT+WPGVTAGPVVSQ +L++F ID+I+V P  VTLV  +DYMT  Q WLDVQ    NG S V TEF+DP +PLFIRNGRDLA ++F D LYTEAFRAALI+F+ ++L  + GPY +S RQ GF TFGE HIL A+A+SSSSTR+AWY KWQVHRVLRPEAYGGL+HNT+   + TPLP S+L NT+LL+RV  +N+  N  G    E T+LLPMA A+GSP HPAYPSGHAINLG YITTLKAF+GFE GQ+C+   ++ S+D G   + YVP   +    C+D +G +  GLT EGELNKVASNVIIGRSHLGVH+RMDGVYGALMGETSAVRRLQQEL  L EAR  D +      ++ IPPA+Y+FRLYSGK+L++++  L++LDG+LCKGAYTGDDFCD V E   +   D+++    F+  +EL
Sbjct:    3 DGTIDPVTQLFRTEWPGVTAGPVVSQLMLADFVIDSIIVPPTAVTLVPRMDYMTAFQPWLDVQ----NGDSDVVTEFIDPAEPLFIRNGRDLANLSFNDQLYTEAFRAALILFSESVLGGSIGPYAESLRQQGFTTFGESHILAAMASSSSSTRHAWYTKWQVHRVLRPEAYGGLLHNTLMKDVITPLPQSILGNTDLLSRVEANNMRMNPDG----EKTFLLPMATAQGSPNHPAYPSGHAINLGGYITTLKAFVGFEAGQKCFPNPVE-SDDGGLARVPYVPTGTEFLEDCVDKDGNKTTGLTIEGELNKVASNVIIGRSHLGVHWRMDGVYGALMGETSAVRRLQQELSGLPEARVVDGAR-----SDDIPPATYKFRLYSGKMLEIFSVTLFRLDGQLCKGAYTGDDFCDVVNEDNFETFEDIVKHSATFSVRTEL 428          
BLAST of mRNA_P-littoralis_Contig69.32.3 vs. uniprot
Match: PRXV_ASCNO (Vanadium-dependent bromoperoxidase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=PRXV_ASCNO)

HSP 1 Score: 429 bits (1104), Expect = 2.000e-135
Identity = 245/594 (41.25%), Postives = 328/594 (55.22%), Query Frame = 3
Query:  222 DSLDFLSPTERAKVTLLKRVNAAKDEFH-VGPTCHITNGDEESVPNFIGQFHKSLPHDEYGTVEPSAYQKLLDCAFSADINVCDQVPSGAASKG--AKMINPLGGTAHQIDGADSDNVFITTPDGVLSEELAAQMAEVYWMALARDVPFSQFGQDNLIRAAAENLERLPAFKGLN-IPKGEDGKIDPAQDLFRTDWPGVTAGPVVSQFLLSNFTIDNIVVQPRQVTLVEGVDYMTTVQDWLDVQAMYLNGASSVKTEFVDPEKPLFIRNGRDLAAIAFGDLLYTEAFRAALIMFNHTILSSAG--GPYTDSERQVGFATFGEPHILTALAASSSSTRNAWYAKWQVHRVLRPEAYGGLVHNTMSHRLKTPLPNSLLQNTELLNRVRNHNIENNGRGGGQREVTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLETLKVSNDEGTELIDYVPGAGDRCIDANGREVGGLTYEGELNKVASNVIIGRSHLGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARAKDSSSQSAYGNNPIPPASYEFRLYSGKVLKLYAGDLYKLDGKLCKG-AYTGDDFC 1982
            D+ D   P ER       RV AAK E    G  C I NG+ +       +FHKSLPHD+ G V+  A+  L DC  + D+++C+ VP G +      +++NP    A  I G       I     + S ELAAQ+AEVYWMALARDVPF Q+G D++   AA NL  +  F  L+ +  G DG +DP   LFR  + GV  GP +SQ L+++FTID+I V+P+Q T    V+YM    +WL++Q    NG      E +D E   F+RN RDLA + F D + TEA+R ALI+      + AG  GP+ D +RQ GF  FG  H    + A+  + R++WY KWQVHR  RPEA GG +H T+   L      SLL+N ELL RV   N   N       EVTYLLP A+ EGSP HP+YPSGHA   GA+ T LKA +G + G  CY + +   +D+G +LID+                  LT+EGE+NK+A NV  GR  LG+HYR DG+ G L+GET  VR L QEL   +E                   +++EFRL++G+V+KL+    + +DG  C G  YTG + C
Sbjct:    8 DADDPTPPNERDDEAFASRVAAAKRELEGTGTVCQINNGETD----LAAKFHKSLPHDDLGQVDADAFAALEDCILNGDLSICEDVPVGNSEGDPVGRLVNPTAAFAIDISGPAFSATTIPPVPTLPSPELAAQLAEVYWMALARDVPFMQYGTDDITVTAAANLAGMEGFPNLDAVSIGSDGTVDPLSQLFRATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPDVNYMVDFDEWLNIQ----NGGPPAGPELLDDELR-FVRNARDLARVTFTDNINTEAYRGALILLGLDAFNRAGVNGPFIDIDRQAGFVNFGISHYFRLIGAAELAQRSSWYQKWQVHRFARPEALGGTLHLTIKGELNADFDLSLLENAELLKRVAAINAAQNPNN----EVTYLLPQAIQEGSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPV-YPDDDGLKLIDFRGSC--------------LTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQELMTFAEE------------------STFEFRLFTGEVIKLFQDGTFTIDGFKCPGLVYTGVENC 555          
BLAST of mRNA_P-littoralis_Contig69.32.3 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE)

HSP 1 Score: 431 bits (1107), Expect = 5.800e-135
Identity = 262/644 (40.68%), Postives = 353/644 (54.81%), Query Frame = 3
Query:  111 VGMAALLVASPPCLGQETSTEHQPTHPLLSGSVCRVR-----DSLDFL-SPTERAKVTLLKRVNAAKDEFHVGP-TCHITNGDEESVPNFIGQFHKSLPHDEYGTVEPSAYQKLLDCAFSADINVCDQVPSGAASKGAKMINPLGGTAHQIDGADSDNVFITTPDGVLSEELAAQMAEVYWMALARDVPFSQFGQDNLIRAAAENLERLPAFK---GLNIPKGEDGKIDPAQDLFRTDWPGVTAGPVVSQFLLSNFTIDNIVVQPRQVTLVEGVDYMTTVQDWLDVQAMYLNGASSVKTEFVDPEKPLFIRNGRDLAAIAFGDLLYTEAFRAALIMFN-------HTILSSAG--GPYTDSERQVGFATFGEPHILTALAASSSSTRNAWYAKWQVHRVLRPEAYGGLVHNTMSHRLKTPLPNSLLQNTELLNRVRNHNIENNGRGGGQREVTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLETLKVSNDEGTELIDYVPGAGDRCIDANGREVGGLTYEGELNKVASNVIIGRSHLGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARAKDSSSQSAYGNNPIPPASYEFRLYSGKVLKLYAGDLYKLDGKLCKG-AYTGDDFC 1982
            +G +     S P L     T   P+   L GS+ R       D+LD   +P ERA   L +R+  A+ EF     T H+ NGD  S   F    HKSLPHD  G V    +  L++C    D + C+ VP+G      ++ NPLGG A ++ GA    + +     + SE+LAAQMAE YWMAL RDVPFSQ+G+D    AAA+NL  +P F    G+ +   E  + DP   LFR+   GV  GP +SQ L+ +FTID+I V P Q T   G DYMT   +WL +Q    NG S      +D E   +IRN RDL+ +   D + TEA+RAALI+ +          +S+ G  GPY DS RQ GF  +G  H++  +  +  + ++AWY KW VH  +RPEA+GG +HN +  +L   +  SLL+NT+LL+RV   N E NGR G   + TYLL  A+ EGSP HP+YP+GHA   GA+ T LKA +G E G  C+ + +   +DEG  L+ Y    G+ C          LT+EGE+NK+A NV +GR+ LGVH+R+D   G L+GET+AVR LQQE                AY  N    A YEFRL SGK ++L     + +D  LC G A+ G D C
Sbjct:   24 IGKSLRQEPSEPRLSGGVDTAASPSKDTLKGSLSRKLQVVNDDALDVSGTPAERAANALNQRIEFAETEFTASEGTLHLNNGDRSSAATF----HKSLPHDSLGQVNSEDFDLLMECIAQGDFDTCELVPAG---DDGRLSNPLGGIAVEMAGAAGPALTLPPASAINSEDLAAQMAEQYWMALTRDVPFSQYGEDEATVAAADNLATMPGFADIVGVAVDP-ETRRADPQSQLFRSSAFGVETGPFISQLLVKDFTIDSITVTPMQKTFAPGADYMTDYDEWLSIQ----NGGSPDSEADLDDEDR-YIRNSRDLSRLVATDTVNTEAYRAALILLDPDQGADGRAAISAPGLNGPYADSSRQAGFVNYGVSHLMRLVGTAELAQKSAWYQKWNVHMFVRPEAFGGSIHNVLLGKLDVEIAPSLLKNTDLLDRVAARNGEINGRPG-VLDRTYLLSQALPEGSPTHPSYPAGHATQNGAFATVLKALVGLERGSVCFNDPV-FPDDEGLTLLPYTGDDGNNC----------LTFEGEINKLAVNVALGRNMLGVHWRIDSELGLLLGETAAVRILQQEAV--------------AYPEN----AGYEFRLMSGKTIRLETDGTFFIDDTLCSGDAFMGADLC 624          
BLAST of mRNA_P-littoralis_Contig69.32.3 vs. uniprot
Match: O82433_FUCDI (Vanadium bromoperoxidase n=1 Tax=Fucus distichus TaxID=3012 RepID=O82433_FUCDI)

HSP 1 Score: 430 bits (1105), Expect = 5.420e-134
Identity = 258/639 (40.38%), Postives = 345/639 (53.99%), Query Frame = 3
Query:   93 IIMKVFVGMAALLVASPPCLGQETST-------EHQPTHPLLSGSVC-RVRDSLDFLSPTERAKVTLLKRVNAAKDEFH-VGPTCHITNGDEESVPNFIGQFHKSLPHDEYGTVEPSAYQKLLDCAFSADINVCDQVPSGAASKGAKMINPLGGTAHQIDGADSDNVFITTPDGVLSEELAAQMAEVYWMALARDVPFSQFGQDNLIRAAAENLERLPAFKGLN-IPKGEDGKIDPAQDLFRTDWPGVTAGPVVSQFLLSNFTIDNIVVQPRQVTLVEGVDYMTTVQDWLDVQAMYLNGASSVKTEFVDPEKPLFIRNGRDLAAIAFGDLLYTEAFRAALIMFNHTILSSAG--GPYTDSERQVGFATFGEPHILTALAASSSSTRNAWYAKWQVHRVLRPEAYGGLVHNTMSHRLKTPLPNSLLQNTELLNRVRNHNIENNGRGGGQREVTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLETLKVSNDEGTELIDYVPGAGDRCIDANGREVGGLTYEGELNKVASNVIIGRSHLGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARAKDSSSQSAYGNNPIPPASYEFRLYSGKVLKLYAGDLYKLDGKLCKG-AYTG 1970
            I+ +V +  A  +V + PCL  +  T       EH+ T        C    D+LD  +P  R  V    R +AA+ E    G  C ITNG+ +        FHKSLPHDE G V    +  L DC  + D ++C+ VP+G  +   +++NP    A  I G       I     + S ELAAQ+AE+YWMALARDVPF Q+G D +   AA NL  +  F  L+ +  G DG +DP   LFR  + GV  GP VSQ L+++FTID I V+P+Q T    ++YM    +WL++Q    NG      E +D E+  FIRN RDLA ++F D + TEA+R +LI+      S  G  GP+ DS+RQ GF  FG  H    + A+  + R + Y KWQVHR  RPEA GG +HNT++  L      SLL+N ELL RV     E N       EVTYLLP A+  GSP HP+YPSGHA   GA+ T LKA +G + G  C+   +  S D+G ELI++              E   LTYEGE+NK+A NV  GR  LG+HYR DG+ G L+GET  VR L QEL   +E                   A++EFRL++G+V+KL+    + +DG +C G  YTG
Sbjct:   80 IMARVRIATALAVVLAAPCLAFDEVTASGVFPEEHKHTGEGRHLQTCTNSDDALDPTAPNRRDNVAFASRRDAARRERDGTGTVCQITNGETDLAT----MFHKSLPHDELGQVTADDFAILEDCILNGDFSICEDVPAGDPA--GRLVNPTAAFAIDISGPAFSATTIPPVPTLSSPELAAQLAELYWMALARDVPFMQYGTDEITTTAAANLAGMGGFPNLDAVSIGSDGTVDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQ----NGGPPAGPEELD-EELRFIRNARDLARVSFVDNINTEAYRGSLILLELGAFSRPGINGPFIDSDRQAGFVNFGTSHYFRLIGAAELAQRASCYQKWQVHRFARPEALGGTLHNTIAGDLDADFDISLLENDELLKRV----AEINAAQNPNNEVTYLLPQAIQVGSPTHPSYPSGHATQNGAFATVLKALIGLDRGGECFPNPVFPS-DDGLELINF--------------EGACLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQELMTFAEE------------------ATFEFRLFTGEVIKLFQDGTFSIDGDMCSGLVYTG 670          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.32.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTP5_ECTSI0.000e+080.15Vanadium-dependent bromoperoxidase n=2 Tax=Ectocar... [more]
A0A3G3BM34_SACJA3.200e-30466.36Vanadium-dependent bromine peroxidase n=1 Tax=Sacc... [more]
Q7X9V0_9PHAE1.010e-29364.57Vanadium-dependent bromoperoxidase 2 n=2 Tax=Lamin... [more]
B7ZGM1_9PHAE9.780e-29264.04Putative vanadium-dependent bromoperoxidase 3 n=4 ... [more]
A0A411NJW8_SACJA2.520e-28863.66Vanadium-dependent bromoperoxidase (Fragment) n=3 ... [more]
K7ZUA3_ASCNO1.630e-26561.23Vanadium-dependent bromoperoxidase 2 n=1 Tax=Ascop... [more]
B7ZGM5_9PHAE5.750e-17761.82Putative vanadium-dependent bromoperoxidase 7 (Fra... [more]
PRXV_ASCNO2.000e-13541.25Vanadium-dependent bromoperoxidase n=1 Tax=Ascophy... [more]
Q4LDE6_9PHAE5.800e-13540.68Vanadium-dependent iodoperoxidase 1 n=1 Tax=Lamina... [more]
O82433_FUCDI5.420e-13440.38Vanadium bromoperoxidase n=1 Tax=Fucus distichus T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig69contigP-littoralis_Contig69:131700..143568 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTP5
Model size3182
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons14
Evalue0.0
EggNOG OGs2EKT6@1|root,2SQKZ@2759|Eukaryota
Ec32 ortholog descriptionvanadium-dependent bromoperoxidase
Ec32 orthologEc-28_003320.1
Cds size1965
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig69.32.3prot_P-littoralis_Contig69.32.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig69 132819..143470 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791430.1903963-UTR-P-littoralis_Contig69:131699..1328181680791430.1903963-UTR-P-littoralis_Contig69:131699..132818Pylaiella littoralis U1_48UTRP-littoralis_Contig69 131700..132818 -
1680791430.3851278-UTR-P-littoralis_Contig69:143470..1435681680791430.3851278-UTR-P-littoralis_Contig69:143470..143568Pylaiella littoralis U1_48UTRP-littoralis_Contig69 143471..143568 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791430.2061222-CDS-P-littoralis_Contig69:132818..1328961680791430.2061222-CDS-P-littoralis_Contig69:132818..132896Pylaiella littoralis U1_48CDSP-littoralis_Contig69 132819..132896 -
1680791430.2194474-CDS-P-littoralis_Contig69:133503..1336981680791430.2194474-CDS-P-littoralis_Contig69:133503..133698Pylaiella littoralis U1_48CDSP-littoralis_Contig69 133504..133698 -
1680791430.232137-CDS-P-littoralis_Contig69:134049..1341601680791430.232137-CDS-P-littoralis_Contig69:134049..134160Pylaiella littoralis U1_48CDSP-littoralis_Contig69 134050..134160 -
1680791430.2432911-CDS-P-littoralis_Contig69:134941..1351091680791430.2432911-CDS-P-littoralis_Contig69:134941..135109Pylaiella littoralis U1_48CDSP-littoralis_Contig69 134942..135109 -
1680791430.2602785-CDS-P-littoralis_Contig69:135602..1357731680791430.2602785-CDS-P-littoralis_Contig69:135602..135773Pylaiella littoralis U1_48CDSP-littoralis_Contig69 135603..135773 -
1680791430.2722332-CDS-P-littoralis_Contig69:136310..1364181680791430.2722332-CDS-P-littoralis_Contig69:136310..136418Pylaiella littoralis U1_48CDSP-littoralis_Contig69 136311..136418 -
1680791430.2847848-CDS-P-littoralis_Contig69:136886..1371651680791430.2847848-CDS-P-littoralis_Contig69:136886..137165Pylaiella littoralis U1_48CDSP-littoralis_Contig69 136887..137165 -
1680791430.2975106-CDS-P-littoralis_Contig69:137663..1378031680791430.2975106-CDS-P-littoralis_Contig69:137663..137803Pylaiella littoralis U1_48CDSP-littoralis_Contig69 137664..137803 -
1680791430.3077397-CDS-P-littoralis_Contig69:138737..1388511680791430.3077397-CDS-P-littoralis_Contig69:138737..138851Pylaiella littoralis U1_48CDSP-littoralis_Contig69 138738..138851 -
1680791430.31974-CDS-P-littoralis_Contig69:139434..1395281680791430.31974-CDS-P-littoralis_Contig69:139434..139528Pylaiella littoralis U1_48CDSP-littoralis_Contig69 139435..139528 -
1680791430.333194-CDS-P-littoralis_Contig69:140525..1405741680791430.333194-CDS-P-littoralis_Contig69:140525..140574Pylaiella littoralis U1_48CDSP-littoralis_Contig69 140526..140574 -
1680791430.345559-CDS-P-littoralis_Contig69:141348..1416621680791430.345559-CDS-P-littoralis_Contig69:141348..141662Pylaiella littoralis U1_48CDSP-littoralis_Contig69 141349..141662 -
1680791430.3604484-CDS-P-littoralis_Contig69:142540..1426781680791430.3604484-CDS-P-littoralis_Contig69:142540..142678Pylaiella littoralis U1_48CDSP-littoralis_Contig69 142541..142678 -
1680791430.3739889-CDS-P-littoralis_Contig69:143464..1434701680791430.3739889-CDS-P-littoralis_Contig69:143464..143470Pylaiella littoralis U1_48CDSP-littoralis_Contig69 143465..143470 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig69.32.3

>prot_P-littoralis_Contig69.32.3 ID=prot_P-littoralis_Contig69.32.3|Name=mRNA_P-littoralis_Contig69.32.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=655bp
MKVFVGMAALLVASPPCLGQETSTEHQPTHPLLSGSVCRVRDSLDFLSPT
ERAKVTLLKRVNAAKDEFHVGPTCHITNGDEESVPNFIGQFHKSLPHDEY
GTVEPSAYQKLLDCAFSADINVCDQVPSGAASKGAKMINPLGGTAHQIDG
ADSDNVFITTPDGVLSEELAAQMAEVYWMALARDVPFSQFGQDNLIRAAA
ENLERLPAFKGLNIPKGEDGKIDPAQDLFRTDWPGVTAGPVVSQFLLSNF
TIDNIVVQPRQVTLVEGVDYMTTVQDWLDVQAMYLNGASSVKTEFVDPEK
PLFIRNGRDLAAIAFGDLLYTEAFRAALIMFNHTILSSAGGPYTDSERQV
GFATFGEPHILTALAASSSSTRNAWYAKWQVHRVLRPEAYGGLVHNTMSH
RLKTPLPNSLLQNTELLNRVRNHNIENNGRGGGQREVTYLLPMAVAEGSP
VHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLETLKVSNDEGTELIDY
VPGAGDRCIDANGREVGGLTYEGELNKVASNVIIGRSHLGVHYRMDGVYG
ALMGETSAVRRLQQELPNLSEARAKDSSSQSAYGNNPIPPASYEFRLYSG
KVLKLYAGDLYKLDGKLCKGAYTGDDFCDEVQESTHDLNDLIREGGDFAF
HSEL*
back to top

mRNA from alignment at P-littoralis_Contig69:131700..143568-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig69.32.3 ID=mRNA_P-littoralis_Contig69.32.3|Name=mRNA_P-littoralis_Contig69.32.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=11869bp|location=Sequence derived from alignment at P-littoralis_Contig69:131700..143568- (Pylaiella littoralis U1_48)
TTTCAAAAACACCACCTACCACCTGTCTCTCCCTCTGCCGCGGCTGCACA CGAGATAAAGGCAACAAAGGCAACAACACTTCTACTTGCTACATCATTAT GAAGGTTTGTGTGTGTGTGTCTCTCTCTCTTTGCATCACGTAGTGATGCG CTTGTATATATGATGCGATATCACAGCATCGAGTGTCGGCGTTTCAGGCG TGGCTGAGTTCAACCCTTATCACCGCATCGAGTGTCGGCGTTTGAGGCGT GGCTGACTTCAACCGCAAGAAGACCAGTACTACATGACTCCGCACGCAAT AAATACTGTACCTGAAAGACGGCCTCCCAATGTGCGCCCACCGTCGTTTC TCTCCGGTATATGGCCGTCCACATAATATGGCGAGCGTTTTTTTTTCATC GTTTCCAGCGCTGCGAATAATGGGCGCGCTTTTCAATATATATATGTAAA CCGCCGAGCGTCATTTTCTGCCTGTCTGCACCAATAAAAATGCACGACGA AACTCACGGGCTGGTTTTCTGTCGATCGTCAAACTAACTAAGCCGAGAAA ACAAAAAAACAACTCAATAAAAAGCAATAAACACGGGAAACTTGCAGATC GCTTTGTAGCAAGAAGTGTTGATCATTGCCTGCCATAGTGGGCACTGCGT GCGTGCAGTCAACACAATTAATCATTTCGACACTGCGCCGTCATTCTACA GCAAGCAGTGCATATCAACGTGAATCGGATAATATTTGATATTATTAGTT GCGGCGAGCTTTAGATAAAAAAAAGTTGAACAGAATAATTCCTCCCCCCC CCCGTCTCTTGGTACACGCTTAGTATATTGATAGTCACCTCGATGCTGTG CGATACATTTCCTCCTCCTCCGCCGTCTCAAAACAAACAGGTTTTCGTCG GAATGGCCGCTCTGCTGGTGGCCTCACCCCCATGCCTGGGCCAAGAGACG TCCACGGAGCACCAGCCGACTCACCCCCTCCTGAGCGGAAGCGTGTGCAG GGTTAGGGACTCTCTTGACTTTCTGAGCGTGAGTTCCGTATTTTCGTTAA TTTGTATTTTCAAGTACAGATATAGTAGACAGTCAAGTCAGTAGGATCAG AGGGAGGGGTGGTCTCAGACGTTTTTCATCTTCTTCGTACATCGCGCTCC CATATTATTCGCGCTGTCTGTCATGATGTGTCATGCTGTACATGAACTCA TGGAAGCACCAGGTCTACATCCATATCATTACTACGTTGTTAACATCTTG ACTCACATTTAATCTACGGGTTGTAACCGCCGCTGTCTGTAGTGTACAGA GCACGCGCCAGCTTTCACCCCCCTCATGGTATCGTTTTCCACGTAAAGAG GTGTAGTGCTCCCTCGGGTAATTGGTTAGCCTTTTTCCCGATGGCTGAGC AATGTGTGTAATCCTTCACGTCTGGCGTCGACTAGGTCAAAAGTTGTGGG TTCGAATCCAACGTGCCCATGTCTTTTTCAAAAAGCCTGTGCGCGAGAAG TAACACTCATTGAGAGCCCCGGCTCTGTCACAAACAATCCTAGGTGGGGA AAGCATCAGGTCTCTCCAGGGATGGAAGTCGGTCCTGATCACTTCCCATC CATGTGTCAGTGCCGGAGAGTGTAAAGAGGTGTGGTCCTCACTCGGGTAA ATGGTTAACCTTTTACCCGATGGCTGAGCAGTCTACTCCTTCACATATAC ATGTTGTCAATATATTAATATTTTTTGGAAAAAAATGACATGTTTCTAGT GTAAGAATCTCAACAATAGTTTCAAATCAATTTGAATGTTTGTGTGTCTT CGAGCGCTCCGTGAAACCACCCCGGACACAACCCGCGTCTCACGCCGCGC CACACAAAAATGCTGTTTTTGCTTTATTTGTTTTTGTTTTCGTTGTTCAT GTCCAGCCCACCGAACGCGCCAAGGTCACCCTCCTGAAGCGCGTAAACGC CGCCAAGGACGAGTTCCACGTCGGCCCCACCTGCCACATCACTAACGGCG ATGAGGAAAGCGTGCCCAACTTCATCGGACAGTTCCACAAGTCGCTCCCC CACGACGAGTACGGTACCGTGGAGCCGTCGGCCTACCAGAAGCTTCTCGA CTGCGCGTTCTCGGCGGACATCAACGTGTGCGACCAGGTGCCATCCGGTG CCGCCTCCAAGGGGGCCAAGATGATCAACCCCCTAGGGGGCACGGCGCAC CAGATCGACGGCGCTGACAGGTAGTTGAGAGTGTGTATGTGTGTGTGTGA GTGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAAAGAGAGAGA GAGTCGTTGACGATGATTGGTGTGTTCCTTGCTGCAGGGGCACCTCCTGC ACTCAATCATTCAAACGCATGTATATTATGTGGAATTGGTTTGATACAAC TACGAAGTCGTCGCCTTTTTTTCCTGGATTCATCGAAGATTAAGATTCAG CATGCTGCTTGGTTATATGATGGTACTATCGAATATACGAGAGGTATTGT AGCAGTACAATCAATAGCATAGCGGCGGTTGGTCGGGTTTGTTAAAAACT GTTGACAGCAGCACACACCCTTTTCCTGGAATATCCCCCCCCCCCCCCTT GTCGGGCCGGGCTTTCATTGCCTAAACTGCAGAACACAGCCTTCTTGTCG TCCTCTCCCCAAGAAATCTCCCGAGAGAGAGTCGACCGCCACTGTTGCAT TCATTCAGTTCAGAAATGCACAACAGCTCACAGCATCTCATTTTTCATTG CAAGACGGTATTTTTTCATTTTCTTGGTCTCTCTCTCCACGTGGAATATT CCTCTCATCATATCACCGTCTTTCCGTCACCAACCCCCCGGCCTCCCTTA ATACTCGTGCATGTTCTGGAACCTCCAACACTGCTTGCGCCTGCTGCACG ACTGGCTCTGAACGACGACGACGACTTGATTGATGATTTTTGACTTTGGT TGTGATTGATTATTGATCATCTGGCTGGCGATTGGCATTTTCAGCGACAA CGTGTTCATCACCACGCCTGACGGCGTCCTGTCCGAAGAATTGGTGAGTG ATTTTATCAGGTTCATTTTCGTGCGAATGGTTTGCAACACGTCGATTGAA GACTGGTCGGGAAATTGTGACACAATATTTTGTTTAGATGCTTTCTGGGG CGCACGTGCGTGCCGCATCATAATAATACCAAAATATCATCGACGGAGCT TGTGGGGCTATGCCACGGGTACTTTCACCGCCACCGTTATAATTTCCGAA TATCTTTTCTTTGTTTTAAGGGAAAAGTTCGGTTCACGGGAGCGAATGAA CGTTTCAAAATAGGTCCATGAAAGAGCAAGCTGGGCTAGCAGCCTATCCT TACGAGCTGTGAACGAGGTCATTTTCGTCGAAATTATGGGGACACGTTCG CGCGGTAGCTTATTGTTCTTTGAAAGGCGCCCTTAGATGTATCATATTAC ACTTTGGAAGCACCCCCGCGTGTGTACTAGAAGACAGCCGTTGTGCATCC ATAACCGACCACACAGTCGGGCCGCCACCGGGTAGAATCGTGTCTCGTCC TGAAAGACAGCTGATAATCCATTCGAAGGTGAAACCTCTCCCATACCGTG CGCAAGCTATTTTTTCTTACCGAGAGAGGAGGCTAAACAAGAATGAGAGG AAGACATTTAAGTGCCCGCAGTTTTCCTGTTGGTCAACATGGGCGCTCCT GAAATCAAATTGGACTCTACCCCCCCATATCGATGAGTGACGACAGCCAC GGTCGAGACCACGTGGCTTTTTCATCCTTAAGAAGGATCGGGCTCGCTCT CTGTCTGATGCTTCGAGACGGAAGACCCACACGCCGAGCATTATTTCCAT CATTATGGTGTGAATGTGCAGACATCTCTCTGCCGTTTTGAAGCGGAAAA AACGTTCTTATGTCTTATTTTCTTAGTACGAAGAATATGACATGAACAAA CCAGATTGATTGACTATCGTCTGCGGGTGAAAGAAATGCGCAACGCACAC GTAACATTTCACCCCGACGATCTCTTTGTCGAGTGAGCAGGCCGCTCAAA TGGCCGAGGTTTACTGGATGGCCCTTGCCCGAGACGTCCCGTTCAGCCAG TTCGGCCAGGACAACCTTATCCGTGCGGCCGCAGGTGAAGCAGCAGCCGT ACCGGGGGTGTTATGCTCGATGCTTTACAAGTCGTGCCCGCGGCATTGTG TGTGTACCGGTTCATCCTCTCCTCCCTCTTGCGCCGTATGAGGACGGGGG GCGGGTGGAAGTTTGGGACGTATCTTCATCCACCCGGAATTGATTCCCCC GCGATTTACGACGGTACACATGTATTATACTATTCCCATATGATTGACTC ACACACGTCGTTTTGACAGCATAATGCTCCTACTGCTTTCACCACGCGTG CGTGTCTGTCGCGCATCCTGTGACGGCAGTCATTTGTTGTGCCCTCGCTA TTCGTTATTTGAGTTTGATGAGTAGAACAACGTCCCCTTCTGCAACATCA CACGTGTAACGAGCCAAGCTAGATTTTAACAGCATTATCATGAGTCTTAC CCTCATCCTTACCCATAAGCAACACATGATCCTCAGCAAACTTGCCCCGT CTATCCGGTAACCCCCCTCCTTCAAGTTCAATGCAACACACGCTAACCAC CTGATCTACCCGTCCACTCTGGATCGGTGTTCCCCTCCCTTTCCCCCCCA CCCCCAAACGCCTACAGAGAACCTGGAGAGACTACCGGCGTTCAAGGGCC TCAACATCCCCAAGGGCGAAGATGGAAAGATCGACCCGGCGCAGGATCTC TTCCGAACGGACTGGCCTGGCGTAACCGCTGGTAAGCATTTGCTATTGCT CGGGGTTGTACTCGCCACCATATGTTCCAATAACATACAACAAGTATAAA TTGTCTGCGTTATATTCTGCATTTAGTGAAATTTTGCTGTCCGCGGCGAT GATGTTCAGAATTTACGGTTGCTCACACAAACTGCTGTTGGTTAGTGTTT ACTGTTTTCCTCTTCGACACAAAGTCTGCAAACGAAAGCATGCAGACAAC GACCCGGCCAATGGTAGCTTGCGGACGTCATACAGGGAGAGGCGGCACCG ATTTACCAGGAAAGAGACTGAACGGACGTTCACACATACGGATGTTATAA TCTATCTATATGCTGCTCGAGCTGAAACGGCATTTCGTATATCACATCTC ATGAAGCGTGACGACAAAGAAGTTTAAACAACCCCGTTCGACGTGGTCAT TATTTCTTCTCCCTTCAAAATCATACACAACGATTATTTGTTTTGTCGAC TTGAATAAACTGACCCTCTTGTGCAGCATGTTCGTCAGATGGACATATTC ACCGGTCCACTTAGTCAGCGGCTGACACTGACTGAGTGGATCGGAGAATA TGCCCATCTGACGAACAAAAGATACGCCGGGTGTTCAATCATCGCTCGCC ACGTGCATTGCTCCTTTTTCTGTTGGCCATGTCAGTAGCGTTTGGCGACG AGGGAGGGGGGCCACCCCCCCCCCCCGGAGCATATCTATTGTTCGTTACA TGGACATATCCACCGGTCCACTCAGTCAGCGTGAGTGGACCGGTGGATAT GTCCATCTGACGAACACAATCGCGACAGGTATTACCTCACCGTGGTTAGC CCCTTGTATAGATGGGTTGTGTGACGGGCCAAAACAAGTATCAACAAATC AACAGAAAATTAACCCCGTTTCAATGCACTGAAAAACTGCCACATTGTCG GCAAAACTGTTGCAGGTCCTGTGGTTTCGCAGTTCCTCCTGTCGAACTTT ACTATCGACAACATCGTCGTGCAGCCCAGGCAAGTTACACTGGTGGAGGG GGTTGACTACATGACAACTGTCCAAGACTGGCTCGACGTTCAGGCAATGT ACCTTGTTGTGGCTGTTGTGGCTGTTGTTGTGGCTGTTGTTGTTGCTGTT GTCGTGATCAATCCGTCAAACGTCGTGCCGTCATTTTTGCCCACGTTTTT TCCAAGCAAATCCGACTATCACGTCAATCAATCAACCGACCTGACGGAGC CGGCAAAGTTTTCTTCAGACAAATGAAACAAATAAAACTCGAGCAACAAA AGTTTGGCTTTCCTGCAGCCCAGGGCGATTTCTTGCATGTTTATTTACCT TTTGGGGTCTTCTTTTTCTTTGGCAAATGCCCCTGCCCCCTGTCCTCTAG CTCTAGGTGTACCTCCTACTTGATAATATCATCACACCTTCTAGTGTTTA GTTGCACAACGAGAGGCGCTTTGCCTTGCCACTTGGGTAATAATTTTCGA GCTCGTGCTCCCTGCGTCCGTCCAACCAAGCCGCGCCCCTTTGCCCCCCT GGCACAAACATAAATACGCGCCTTCGATTTCGTCTCCCCGTCTGAGCTCG CAGAACGGTGCCTCCAGCGTCAAAACCGAGTTCGTCGATCCCGAAAAGCC GCTCTTCATCCGGAACGGTCGGGACCTGGCGGCGATCGCTTTCGGGGATC TACTCTACACCGAGGCGTTTCGCGCCGCGCTCATCATGTTCAACCACACC ATCCTCTCGAGCGCCGGGGGGCCGTACACTGACTCCGAGCGGCAAGTCGG GTTTGCGACCTTCGGCGAGCCACACATCCTCACGGCCCTCGCGGCGTCTA GCTCTTCCACTCGGAACGCGTGGTACGCCAAGGTGAGGAATGATACATGA AATAAATGAAACGTGAAAGTACGCTTTGCTTTGTCAAGCAGAGATTGATA TACGATTTGATAGAGAGAGATAAATAGGAGGTACGTTGATAGATGTGCGT ATGCCTTGGTATTATCGGAGAGATACAGAGGAAGCGAAAGAGAGCGATAT AAGTCAGGTGTATTCCAGCAGGGAGAGGTTAAGCGTATACTCCAGGAAAA AGACAGCGGGTTTAAGCGAGACGGGGCGGAAAATGTCGAAGATACAGTAC AGTTAATGAAAAGGTGGATATATGGAGAAGGATAAATAACTGCAACGTAT ACCGAGATAGAACAGAGTCTGCGTCGTGTTCCGTTGAGCATTCTTATCAT GGTCGATCGACCCCCCCCCCCCTGCTCGCGTGCCTTGACTCTTGTAACCC CTCCACACATACCCTCCCCCATCGTTCCGCGAACACAAAAACAATCACAG TGGCAAGTGCACCGCGTGCTGAGGCCCGAGGCATACGGTGGCCTGGTGCA CAACACTATGTCCCATCGCCTGAAGACGCCTCTCCCGAACTCGCTCCTCC AGAACACGGTGAGAGTGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT CTTTGTTGTTGTTTTTGGAGAAGAGCAAAAACACCTTTCTCGAAGTTAAA CTAAGTCGTTTCACCGCAGCCCGGGGCCCCCTGATTGATTTTCTAGCGTT CATCGCTGATTTCGAAACCGACCTACAAAAGGCACTTCATCCTGGAGTAC GGCGTCTGCCGCTGGCCACAATGATCCCTCATGTTTTGATGTGCTGTAGC CCTCGGCAGCATACAAGTACACGTTGTCAAGATTTTATTGTCATCATGGC ACATCGTTTCTCGAGGCGAACAGCCGTGAAAAGTCTGGGGCAAATATATC ATTATTGTTAGTTTCCGGGGGGGGGGGGGGGCAAGTAGAGGACTGTTTTC GTTGTGTTCGTCGTCGTTGTTTTATGCTAGATTTTGTTCACGAAAAAATA CAAAAAACACGGCCCTTCACTTTCGAATTGAAAAGTTCTTCTGACGGCCA ACCTTAACCTTCGAATGAATAAATAATGCCGCCCGGCCTTCCCAGGAGCT CCTGAACCGAGTGAGGAATCACAACATTGAGAACAACGGAAGGGGGGGGG GGCAGCGCGAGGTCACATACCTTTTGCCCATGGCAGTCGCCGAGGGTTCT CCCGTGCACCCGGCCTACCCCAGTGGGCACGCCATCAACCTCGGCGCCTA CATCACCACGCTTAAGGTAAATACGGGAGGAGCTCGATGAACGGACGGCA CTCGAAGCAATTTGTGCAGCAATATCACAAAAGTTGTGTTAATTCGTTCG AATAACGATGGAATGATAACCCATTACCGCTTTTTCATTATCGTTTTGTG TGTAGATATGCGAGGTACATAACCACGGTCGAGGTGCGGGGGGGCCGACG ACAGATAACAACATTGTCGAACGATCTCGTGTAACAAAACTCACTCCTCC TTGTGCAGTAATAATACACATTTTGTTTTATTTTTTGGGCGTACAACACC ATAGCACGTACGTAGATGACGATACGAAGTGAGGGAGGAAGAGGGTGTGT GTACGCGTCAGTAGTCCCTTTCGAGCACGACGAAGGGAAGCATACTCTGT GGCAGCCAAAACGTACTCTCAAAATGACCTCCACATGTGTCCATGCGTGC GTGTTAAGACATGTTATCGCCCCCCCTCCCTATCGCCACTTTTCCAACGA AACGAACAGGCGTTCCTAGGATTCGAGCTCGGCCAGAGGTGCTACCTCGA GACCTTGAAGGTGTCCAACGACGAAGGCACCGAGCTAATCGACTACGTGC CGGGTGCAGGAGACAGGTGCATCGACGCGAATGGCAGGGAGGTCGGGGGC CTCACCTACGAGGGCGAGCTCAACAAGGTATGGTATGGCGACCATGTTTA TTTCGGGGGCCAGTCGATCAATCAGCCCGAGCTCGGTCAGCAGTGCTGTG TATCGGTGCAGCTCAGAGGAGACGTATCCGACAAGAAAAGCGGAGCTCTG AAAGAAACATTTCGATTTCACGCGGCTGTATCGTACAGCAGTGGTGAATG AGAATATAACGGTTTTTTGAGATCCTTTTGTTTTATGCACATGCATCAGG GGACACAAACTCGGCATCGGCCAGAAACAAGGCAAAACAAATACTGTACG ATTTTTAATGAACCATTGTCTTCCACGTGTAGTAGAGTTTGCATTGATGC TGACACTTCACTTCACGTGGGGCAAGTTGGATAATACCGGAAGTTTCGAC ACCTGAGATGACCTTACCCCGTCGTGCTCAAAAACAAAATCATGTGATAA AACACGCCTTCTTCTTTTACCACTCTCCCTCTCCGATCAGGATTAATTCA TTCCTGTGTTGTGTTTCGTTCTTGAAATCGCCCTCCCCCCCCACCTCTTT TTCTTGTTTTTGTTCTACCCCGCCCCCCCCTCTCACTTGTTCTCATTGGC CAGGTGGGGTCCAACACGCGTCTGAATGTATCATATCATCATTATTATCT CAAAACTGTTCGTGCTTCCTTTCCCTTCCGTCTATCGATCGAGATCAAGG TGTGACGACACACATCTCTTTATTAACCTATTTCGTTCTCAAAATTGTGA TTCCCCCACCACCGATTTTGTGATATGTGTCATTCCTCTCCTTCTTGGAC GATCCCAGGTGGCATCCAACGTGATCATCGGAAGGTCGCACCTCGGCGTG CACTACCGGATGGACGGTGTCTACGGCGCGCTCATGGGAGAGACCAGCGC CGTCCGCCGCCTGCAGCAGGTAAACATTATGTAAAAATGACGCAAGCACG GCCAATCGAGCAGAATCACGATAGTGTCGTATGAGCGGGTTCTAGTTGGG TGGTATATATATGTTTTACTCTTTAAACCGACCATGTGATGTGATATGCG GCCACAACACGTACGTATCATGATCGTGCCCCCCCGCGCGCTGCTACAGA GTGTTGCAGCAACGAGAGCACGAAAACATGAATCATTCAGTGCTGCACGC AACAAGCAGAACTACTACATCATACGCACTCACTCACGCGATACCGTTCT CTATCCCCCCCCCCCCCCTCCGTTTACCGGCGACGCACACACCATGATGT ATGTATGTACTTTGTTCCAGGAGCTGCCCAACCTTTCTGAGGCCCGCGCC AAAGACAGCAGCAGCCAATCCGCGTACGGCAACAACCCCATCCCGCCGGC ATCGTACGAGTTCCGCCTGTACAGCGGAAAGGTCCTCAAGCTGTACGCGG GGGATCTGTACAAGCTCGACGGGAAGCTTTGCAAGGGGGCCTACACGGGG GACGACTTCTGTGATGTGAGTGCTAACACGCTTTCAAACTAATAGGAGTG TCTTGTCTTTCGACGATAGCCCCCCCCCCCCCCCCCCCCCCCGCGCGATT TCTTGAACGAAAATCGCTGGTTTTGAAACCAGCGCCGGTTTTTCACCTGG GCGTACATCCTGAAGTCTTGTGTCTTGAGATGGTGACTTCCGGTTATTGA TAGCCCTCGGCATACAAATATCAAATGAATGTGTCATATCCTACCACATA TACTTTGTTTTTTCATAGCCTCCTTCCTCGTCCCTCAAAAAGCCATGAGA CGTTCGTTAGAAAAACCGCCCGTCGGTTTGTGGGGGGAACTATGATTATT GTAGAAAGACTCTAGACGGGAGGGGATATACACGACTCTCGCACACCGTG CCGTCATCGTTTTTTTATAATAGCTATTTTCCGTTCTCTTGTGTGGTGGT ACTGGCGTTGTTGTGTCTAGAGGAAAGGTCCAAGCTCGGCGTATCGGGTC ATAATTTCGTCATCTCTTTTGTTTTTTTGCGGTAAAATATTCTTAAAAGG TTCCCACAACACCTCCTTCATATGCTTGTTTACAAACGAAATGTTAATGT TACACTGCGCGCTCACGATCAGGAGGTGCAGGAGAGCACACACGACCTGA ACGACCTGATTCGCGAGGGTGGCGATTTCGCTTTCCACTCTGAGCTTTAA GCCTTCACCCACCATCCAGCCTGTAAGAAGAATCCACACATACAGTGCTC TGATGATGCGCAAGCTATGATACAGCAGCAGCAGCAGCAGCAGCAGTGAC GACTTCAAGACGCCTGGCAAGGAATGCGGAGCCAACCGTGTGAGCCACGG TAGTCGCTCTCGTCGGATGGCGTGACGAACAAGTCGTGTGCCCACGTCAT CCATCCGCGGGAAATCGAACTGCGCATTAGAAGGTCCAGAAGGGTGCTAC TATAGTGGGTCGGAATACGCTGTTGTTCGGTGTAGGTGGTTATTGCTGCT GTTCCGTTTGGTTGATGCTGTGTTGAGTTGTTGGCTTGATATGTCTGTGA GTACTGAAAAACGTCATTGCTACTTGGTATCTGTAAGTAGTTGTGAGTTG TCTCTTCATAGAGTTGGGCCCAGACATTTCTCGCAGTTTTGTTTTCGGCG TGTCGTTTTTTTCTTGTTTGAATCGATCTACATTTTTATTTGGACGTTTG TTGGTCGACCGAATCCTCGGGCTGAATGATATCTGGTATGGTATATCACA TCGTACACTCACTGTGGACAATCGACTATGCGTACTGTGACAGGCTTGTC CGTTCACTCCGAGCTGGTAGGGGTGCGCCACGCACGATCCGACGTTCCGG CATCATACAATTACATGAACATATGTGTTGCATCTCAACCACGTTGGTTG TAGTAGTCATCCTCCTCGTCAATTTGTGGAGTGGAGTGGAGTGGAGTGGA GCGGAGTTCAAGTCGTAGGAAAAGTGAAGTAGGAATAGGGTGCGCGTGCT TCAGAGTGAATTCAGTAATGCCACGCAATGATTGTGTACGTCGCTTCGTG CCGTGCGTCTTCTACGCCCACTCTCGGAATGACCCCATGATGTTTCCCCG ATCGGTGGTGTGGAAAATAAAAGAGTTGTGGAAAATATAGGTAGCCGCTC GGCCGAGCTGGTTGCATGCAATCCAGGGACAAAAAAGTGCCCCCCCTTTT GTGGGATGGGTCACAGCAACACGCTCGAACTTGAGTGGGCGAGACAGAAG CTTGTAGGAGGACCTCTGTAATAAAGCCCGGTCCAAAGTTTTTTTCTCCT TTTTTTTTCCCGAAACCCC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig69:131700..143568-

>mRNA_P-littoralis_Contig69.32.3 ID=mRNA_P-littoralis_Contig69.32.3|Name=mRNA_P-littoralis_Contig69.32.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1965bp|location=Sequence derived from alignment at P-littoralis_Contig69:131700..143568- (Pylaiella littoralis U1_48)
ATGAAGGTTTTCGTCGGAATGGCCGCTCTGCTGGTGGCCTCACCCCCATG
CCTGGGCCAAGAGACGTCCACGGAGCACCAGCCGACTCACCCCCTCCTGA
GCGGAAGCGTGTGCAGGGTTAGGGACTCTCTTGACTTTCTGAGCCCCACC
GAACGCGCCAAGGTCACCCTCCTGAAGCGCGTAAACGCCGCCAAGGACGA
GTTCCACGTCGGCCCCACCTGCCACATCACTAACGGCGATGAGGAAAGCG
TGCCCAACTTCATCGGACAGTTCCACAAGTCGCTCCCCCACGACGAGTAC
GGTACCGTGGAGCCGTCGGCCTACCAGAAGCTTCTCGACTGCGCGTTCTC
GGCGGACATCAACGTGTGCGACCAGGTGCCATCCGGTGCCGCCTCCAAGG
GGGCCAAGATGATCAACCCCCTAGGGGGCACGGCGCACCAGATCGACGGC
GCTGACAGCGACAACGTGTTCATCACCACGCCTGACGGCGTCCTGTCCGA
AGAATTGGCCGCTCAAATGGCCGAGGTTTACTGGATGGCCCTTGCCCGAG
ACGTCCCGTTCAGCCAGTTCGGCCAGGACAACCTTATCCGTGCGGCCGCA
GAGAACCTGGAGAGACTACCGGCGTTCAAGGGCCTCAACATCCCCAAGGG
CGAAGATGGAAAGATCGACCCGGCGCAGGATCTCTTCCGAACGGACTGGC
CTGGCGTAACCGCTGGTCCTGTGGTTTCGCAGTTCCTCCTGTCGAACTTT
ACTATCGACAACATCGTCGTGCAGCCCAGGCAAGTTACACTGGTGGAGGG
GGTTGACTACATGACAACTGTCCAAGACTGGCTCGACGTTCAGGCAATGT
ACCTTAACGGTGCCTCCAGCGTCAAAACCGAGTTCGTCGATCCCGAAAAG
CCGCTCTTCATCCGGAACGGTCGGGACCTGGCGGCGATCGCTTTCGGGGA
TCTACTCTACACCGAGGCGTTTCGCGCCGCGCTCATCATGTTCAACCACA
CCATCCTCTCGAGCGCCGGGGGGCCGTACACTGACTCCGAGCGGCAAGTC
GGGTTTGCGACCTTCGGCGAGCCACACATCCTCACGGCCCTCGCGGCGTC
TAGCTCTTCCACTCGGAACGCGTGGTACGCCAAGTGGCAAGTGCACCGCG
TGCTGAGGCCCGAGGCATACGGTGGCCTGGTGCACAACACTATGTCCCAT
CGCCTGAAGACGCCTCTCCCGAACTCGCTCCTCCAGAACACGGAGCTCCT
GAACCGAGTGAGGAATCACAACATTGAGAACAACGGAAGGGGGGGGGGGC
AGCGCGAGGTCACATACCTTTTGCCCATGGCAGTCGCCGAGGGTTCTCCC
GTGCACCCGGCCTACCCCAGTGGGCACGCCATCAACCTCGGCGCCTACAT
CACCACGCTTAAGGCGTTCCTAGGATTCGAGCTCGGCCAGAGGTGCTACC
TCGAGACCTTGAAGGTGTCCAACGACGAAGGCACCGAGCTAATCGACTAC
GTGCCGGGTGCAGGAGACAGGTGCATCGACGCGAATGGCAGGGAGGTCGG
GGGCCTCACCTACGAGGGCGAGCTCAACAAGGTGGCATCCAACGTGATCA
TCGGAAGGTCGCACCTCGGCGTGCACTACCGGATGGACGGTGTCTACGGC
GCGCTCATGGGAGAGACCAGCGCCGTCCGCCGCCTGCAGCAGGAGCTGCC
CAACCTTTCTGAGGCCCGCGCCAAAGACAGCAGCAGCCAATCCGCGTACG
GCAACAACCCCATCCCGCCGGCATCGTACGAGTTCCGCCTGTACAGCGGA
AAGGTCCTCAAGCTGTACGCGGGGGATCTGTACAAGCTCGACGGGAAGCT
TTGCAAGGGGGCCTACACGGGGGACGACTTCTGTGATGAGGTGCAGGAGA
GCACACACGACCTGAACGACCTGATTCGCGAGGGTGGCGATTTCGCTTTC
CACTCTGAGCTTTAA
back to top