prot_P-littoralis_Contig69.18.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig69.18.3
Unique Name	prot_P-littoralis_Contig69.18.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	141

Homology

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BLAST of mRNA_P-littoralis_Contig69.18.3 vs. uniprot
Match: D8LTP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP8_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 9.380e-40
Identity = 81/142 (57.04%), Postives = 100/142 (70.42%), Query Frame = 0

Query:    1 AGAAALTKSDSKAGKFSRKVGKLSSDVILAGVRIAREFNQKHRLVDKTKETAQRVASRVSTEVKKRGIVDDVKARTKSLWAHIQERTTPAGEAPSQAQAPPSAGLVTNGTQLPFGGTADAYGTTPSSSEW--KSLPPKTFDA 140
            AGAAALTKSDSK GKFSRKVGK+SSD++LA  R+ARE+N KH+L DK K  A+  A +V+ +++K GIVD+VKAR  SLW  + +RT PAG+A  QA        VT+GTQ+PF G  DAY T  SSS    K   PK+FDA
Sbjct:   81 AGAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQVDKRTAPAGQASIQAAQGQDLSQVTDGTQIPFDGAVDAYVTDSSSSSSYSKGRKPKSFDA 222

[Close]

BLAST of mRNA_P-littoralis_Contig69.18.3 vs. uniprot
Match: D8LTP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP9_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.430e-17
Identity = 62/146 (42.47%), Postives = 78/146 (53.42%), Query Frame = 0

Query:    3 AAALTKSDSKAGKFSRKVGKLSSDVILAGVRIAREFNQKHRLVDKTKETAQRVASRVSTEVKKRGIVDDVKARTKSLWAHIQERTTPAGEAPSQ----AQAPPSAGLVTNGTQLPFGGTADAYGTTP----SSSEWKSLPPKTFDA 140
            AA +TKSDSKAG  SR+ G   SDV+LA  R  REFN+ ++L DK K T Q  A +V  E++K GI D V  R  SLW  + +RT PA + PS+    AQ   +  L     Q  F    DA  + P    SS   K+ P K  DA
Sbjct:  103 AAVVTKSDSKAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDKRTAPAAQ-PSKFVHGAQGQDTISLFREEPQPGFDNAGDAPKSAPCSPSSSENEKTAPVKLSDA 247

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig69.18.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig69.18.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LTP8_ECTSI	9.380e-40	57.04	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LTP9_ECTSI	1.430e-17	42.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..140

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig69	contig	P-littoralis_Contig69:92584..94919 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig69.18.3	mRNA_P-littoralis_Contig69.18.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig69 91589..94919 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig69.18.3 ID=prot_P-littoralis_Contig69.18.3|Name=mRNA_P-littoralis_Contig69.18.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=141bp
AGAAALTKSDSKAGKFSRKVGKLSSDVILAGVRIAREFNQKHRLVDKTKE
TAQRVASRVSTEVKKRGIVDDVKARTKSLWAHIQERTTPAGEAPSQAQAP
PSAGLVTNGTQLPFGGTADAYGTTPSSSEWKSLPPKTFDA*