prot_P-littoralis_Contig69.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig69.18.1
Unique Nameprot_P-littoralis_Contig69.18.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length237
Homology
BLAST of mRNA_P-littoralis_Contig69.18.1 vs. uniprot
Match: D8LTP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP8_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 2.500e-63
Identity = 128/238 (53.78%), Postives = 154/238 (64.71%), Query Frame = 0
Query:    1 MCKSTHPQQSGEPGAAAAAAAGDTPRRPQPEQQSVDTADYTVKSFELKLDQQQEGQHEEILSSDESSGVVVFGCFAAGALVGIVICAPAFVVLLFGAGAAALTKSDSKAGKISRKVGKVSSDIILAGVRIAREFNLKHRLADKTKETAQRVASRVSTEVKKRGIVDDVKARTKSLWAHIQERTTPAGEAPSQAQAPPSAGLVNDGTQLPFGGTADAYETTPSSSEW--KSLPPKTFDA 236
            MCKS+ PQ S E    AA  A + P        S D A     S         E  H+E+++ DE+SG++VFG F AGALVG+VICAPAFVVLLFGAGAAALTKSDSK GK SRKVGKVSSDI+LA  R+ARE+N KH+L DK K  A+  A +V+ +++K GIVD+VKAR  SLW  + +RT PAG+A  QA        V DGTQ+PF G  DAY T  SSS    K   PK+FDA
Sbjct:    1 MCKSSQPQGSSE----AAPVAMEVPTN-----DSYDLAKPCAIS-------DNEQPHQEVIAHDEASGIIVFGSFIAGALVGVVICAPAFVVLLFGAGAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQVDKRTAPAGQASIQAAQGQDLSQVTDGTQIPFDGAVDAYVTDSSSSSSYSKGRKPKSFDA 222          
BLAST of mRNA_P-littoralis_Contig69.18.1 vs. uniprot
Match: D8LTQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ0_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.360e-41
Identity = 95/200 (47.50%), Postives = 127/200 (63.50%), Query Frame = 0
Query:   49 LDQQQEGQHEE-ILSSDESSGVVVFGCFAAGALVGIVIC------APAFVVLLFGAGAAALTKSDSKAGKISRKVGKVSSDIILAGVRIAREFNLKHRLADKTKETAQRVASRVSTEVKKRGIVDDVKARTKSLWAHIQERTTPAGEAPSQA-QAPPSAGLVNDGTQLPFGGTADAYET----TPSSSEWKSLPPKTFDA 236
            LD +QE  H+E  L+ DESS ++V G F AGALVG ++C      AP  VVLL GAGAA  TKSDSKAG+ISR+VGK + D+ LA  R+ REFN K++L  K + TAQ  A +V  EV++ GI D VK R +SLW  + +RT PAG+ P +A Q   +  L+ +  QL F   ADA E+    + SS + K++  + FDA
Sbjct:   25 LDTEQEHHHDESTLAHDESSAIIVLGSFVAGALVGAILCVRVFMFAPTVVVLLCGAGAAVFTKSDSKAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDKRTAPAGQPPIRAAQGQDTISLMMEEPQLGFDDAADALESKSCSSSSSEDEKTVRLRLFDA 224          
BLAST of mRNA_P-littoralis_Contig69.18.1 vs. uniprot
Match: D8LTP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP9_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.860e-26
Identity = 91/224 (40.62%), Postives = 114/224 (50.89%), Query Frame = 0
Query:   42 VKSFELKLDQQQEGQHEE---ILSSDESSGVVVFGCFAAGALVGIVIC------APAFVVLLFGA------------GAAALTKSDSKAGKISRKVGKVSSDIILAGVRIAREFNLKHRLADKTKETAQRVASRVSTEVKKRGIVDDVKARTKSLWAHIQERTTPAGEAPSQ----AQAPPSAGLVNDGTQLPFGGTADAYETTP----SSSEWKSLPPKTFDA 236
             KSFE+  D   E QH     IL  DESS + + G F AGA VG +IC      AP   +LL GA             AA +TKSDSKAG ISR+ G   SD++LA  R  REFN  ++L DK K T Q  A +V  E++K GI D V  R  SLW  + +RT PA + PS+    AQ   +  L  +  Q  F    DA ++ P    SS   K+ P K  DA
Sbjct:   27 AKSFEV--DNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDKRTAPAAQ-PSKFVHGAQGQDTISLFREEPQPGFDNAGDAPKSAPCSPSSSENEKTAPVKLSDA 247          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LTP8_ECTSI2.500e-6353.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LTQ0_ECTSI1.360e-4147.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LTP9_ECTSI1.860e-2640.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig69contigP-littoralis_Contig69:101361..104142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig69.18.1mRNA_P-littoralis_Contig69.18.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig69 100192..104275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig69.18.1 ID=prot_P-littoralis_Contig69.18.1|Name=mRNA_P-littoralis_Contig69.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=237bp
MCKSTHPQQSGEPGAAAAAAAGDTPRRPQPEQQSVDTADYTVKSFELKLD
QQQEGQHEEILSSDESSGVVVFGCFAAGALVGIVICAPAFVVLLFGAGAA
ALTKSDSKAGKISRKVGKVSSDIILAGVRIAREFNLKHRLADKTKETAQR
VASRVSTEVKKRGIVDDVKARTKSLWAHIQERTTPAGEAPSQAQAPPSAG
LVNDGTQLPFGGTADAYETTPSSSEWKSLPPKTFDA*
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