mRNA_P-littoralis_Contig689.36.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig689.36.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 255 bits (652), Expect = 1.810e-82 Identity = 121/163 (74.23%), Postives = 140/163 (85.89%), Query Frame = 3
Query: 252 PYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGLEHSLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNM 740
PYNQARS+TGKEGYPT+AYQVTVDHTKR LAVTPGFTG+TNDK+IIR+D AVT+IR DPIY+E+ + +Y+ADG Q KGCYLLVDNGYHK +L+ P+KY I++ D FS RLES RKDVEC+FGIVKG FRI KL+IPYHK+EDIDNVFFTCCILHNM
Sbjct: 3 PYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWV---TLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNM 162
BLAST of mRNA_P-littoralis_Contig689.36.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 258 bits (660), Expect = 1.550e-80 Identity = 124/170 (72.94%), Postives = 143/170 (84.12%), Query Frame = 3
Query: 231 HPPRVGLPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGLEHSLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNM 740
H P PYNQARS+TGKEGYPT+AYQVTVDHTKR LAVTPGFTG+TNDK+IIR+D AVT+IR DPIY+E+ + +Y+ADG Q KGCYLLVDNGYHK +L+ P+KY I++ D FS RLES RKDVEC+FGIVKGRFRI KL+IPYHK+EDIDNVFFTCCILHNM
Sbjct: 237 HIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWV---TLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNM 403
BLAST of mRNA_P-littoralis_Contig689.36.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 252 bits (643), Expect = 6.830e-79 Identity = 121/163 (74.23%), Postives = 139/163 (85.28%), Query Frame = 3
Query: 252 PYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGLEHSLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNM 740
PYNQAR +TGKEG PT+A+QVTVDH+ R LAVT GFTGATNDKTIIR+DKAVTRIRTDP+YTE+ Y LY DG +EKGCYLLVDNGYHK +L+ P+K I++GD +FS RLES+RKDVECYFGI+KGRFRINKLAI +HK+E IDNVFFTCCILHNM
Sbjct: 169 PYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKW---RTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNM 328
BLAST of mRNA_P-littoralis_Contig689.36.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 252 bits (643), Expect = 8.060e-78 Identity = 121/163 (74.23%), Postives = 139/163 (85.28%), Query Frame = 3
Query: 252 PYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGLEHSLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNM 740
PYNQAR +TGKEG PT+A+QVTVDH+ R LAVT GFTGATNDKTIIR+DKAVTRIRTDP+YTE+ Y LY DG +EKGCYLLVDNGYHK +L+ P+K I++GD +FS RLES+RKDVECYFGI+KGRFRINKLAI +HK+E IDNVFFTCCILHNM
Sbjct: 260 PYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKW---RTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNM 419
BLAST of mRNA_P-littoralis_Contig689.36.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 229 bits (583), Expect = 7.700e-71 Identity = 110/167 (65.87%), Postives = 133/167 (79.64%), Query Frame = 3
Query: 240 RVGLPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGLEHSLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNM 740
R+G PYNQARS+TGK+ +PTIAYQVTVDH RA+AVT GFTG+TNDKTI+ +D AV +IRTD YTE+T++LY+ DG T KGCY L DNGYHK + L+ P+KY + + D +FS RLES RKDVEC+FGI+KGRFRI KLA+ Y +E IDNVFFTCCILHNM
Sbjct: 87 RLGCPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQI---LIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNM 250
BLAST of mRNA_P-littoralis_Contig689.36.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 220 bits (561), Expect = 5.280e-68 Identity = 105/163 (64.42%), Postives = 129/163 (79.14%), Query Frame = 3
Query: 252 PYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGLEHSLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNM 740
PYNQARS+TGKEG+PTI YQVTVDH RA+AVT GFTG+TNDKT + +D AV +IRTD YTE+T+++Y+ DG T KGCY+LVDNGYHK + L+ P+KY + + D +FS RLES RKDVEC+FGI+KGR RI LA+ + +E IDNVFFTCCILHNM
Sbjct: 46 PYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQI---LIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNM 205
BLAST of mRNA_P-littoralis_Contig689.36.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 217 bits (552), Expect = 4.240e-67 Identity = 105/163 (64.42%), Postives = 124/163 (76.07%), Query Frame = 3
Query: 252 PYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGLEHSLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNM 740
P+ RSFTGKEG+PTIAY+VTVDH RALAVT GFTGATNDKTIIR+D V IRT+ YTER Y L +G R +GC+L++DN YH+ +L+AP+KY DT FS LES RKDVEC+FGI+KGRFRI KL +PYHK+E IDN+FFTCCILHNM
Sbjct: 3 PFTLGRSFTGKEGFPTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWV---TLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNM 162
BLAST of mRNA_P-littoralis_Contig689.36.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 220 bits (560), Expect = 1.290e-66 Identity = 105/163 (64.42%), Postives = 128/163 (78.53%), Query Frame = 3
Query: 252 PYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGLEHSLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNM 740
PYN ARS+TGKEG PT+ YQVTV+H RA+AVT GFT +TNDKT + +D V +IRTD YTE+T+++Y+ DG T KGCYLLVDNGYHK + LM PTKY + + D +FS RLES RKDVEC+FGI+KG FRI K+A+ YH++E IDNVFFTCCILHNM
Sbjct: 186 PYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKI---LMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNM 345
BLAST of mRNA_P-littoralis_Contig689.36.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 211 bits (537), Expect = 1.860e-62 Identity = 103/163 (63.19%), Postives = 124/163 (76.07%), Query Frame = 3
Query: 252 PYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGLEHSLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNM 740
PYNQ RS+TGKEG PT+ YQVTV+H R LAVT GFTG+TNDKTII D+AV RIRTD Y E+ + ++ DG T KGCYL+VDNGYHK + L+ P+KY + + D +FS RLES RKDVEC+FGI+K RFRI KLA+ Y K+E +D VFFTCCILHNM
Sbjct: 215 PYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRM---LIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNM 374
BLAST of mRNA_P-littoralis_Contig689.36.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 209 bits (531), Expect = 9.650e-62 Identity = 109/191 (57.07%), Postives = 131/191 (68.59%), Query Frame = 3
Query: 252 PYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYT----------------------------ERTYNLYDADGATRQEKGCYLLVDNGYHKVGLEHSLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNM 740
PYNQARS+TGKEG+PTIAYQVTVDH RA+AVT GFTG+TNDKTI+ +D AV +I TD YT E+T+++Y+ DG T KGCYLLVDNGYHK + L+ P+KY + + D +FS RLES RKDVEC+FGI+KGRFRI KLA+ Y +E IDNVFFTC ILHNM
Sbjct: 173 PYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQI---LIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNM 360 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig689.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig689.36.1 >prot_P-littoralis_Contig689.36.1 ID=prot_P-littoralis_Contig689.36.1|Name=mRNA_P-littoralis_Contig689.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=104bp MACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPback to top mRNA from alignment at P-littoralis_Contig689:143460..144778+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig689.36.1 ID=mRNA_P-littoralis_Contig689.36.1|Name=mRNA_P-littoralis_Contig689.36.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1319bp|location=Sequence derived from alignment at P-littoralis_Contig689:143460..144778+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig689:143460..144778+ >mRNA_P-littoralis_Contig689.36.1 ID=mRNA_P-littoralis_Contig689.36.1|Name=mRNA_P-littoralis_Contig689.36.1|organism=Pylaiella littoralis U1_48|type=CDS|length=312bp|location=Sequence derived from alignment at P-littoralis_Contig689:143460..144778+ (Pylaiella littoralis U1_48)back to top |