mRNA_P-littoralis_Contig689.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig689.2.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE) HSP 1 Score: 248 bits (632), Expect = 2.260e-80 Identity = 133/172 (77.33%), Postives = 140/172 (81.40%), Query Frame = 1
Query: 1 PVAKVTAVHTGANAKRATADTAEGLERELYLAKGAKVMLTKNLYQQVGLVNGIRGEVVELVYADDAPPPKLPLYVVVKFVGYSGGGL-------------------------VRTQLPLRRYWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPIEF 441
PVA+V+AVHTGANA+RATADTAEGLER+LYLAKGAKVML+KNLYQQVGLVNGIRGEVVELV ADDAPPPKLPLYVVVKF GYSGG VRTQLPLR WAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDL+VEP+ F
Sbjct: 73 PVARVSAVHTGANARRATADTAEGLERDLYLAKGAKVMLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSF 244
BLAST of mRNA_P-littoralis_Contig689.2.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE) HSP 1 Score: 248 bits (632), Expect = 2.640e-73 Identity = 133/172 (77.33%), Postives = 140/172 (81.40%), Query Frame = 1
Query: 1 PVAKVTAVHTGANAKRATADTAEGLERELYLAKGAKVMLTKNLYQQVGLVNGIRGEVVELVYADDAPPPKLPLYVVVKFVGYSGGGL-------------------------VRTQLPLRRYWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPIEF 441
PVA+V+AVHTGANA+RATADTAEGLER+LYLAKGAKVML+KNLYQQVGLVNGIRGEVVELV ADDAPPPKLPLYVVVKF GYSGG VRTQLPLR WAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDL+VEP+ F
Sbjct: 1378 PVARVSAVHTGANARRATADTAEGLERDLYLAKGAKVMLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSF 1549
BLAST of mRNA_P-littoralis_Contig689.2.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE) HSP 1 Score: 218 bits (556), Expect = 8.850e-67 Identity = 117/153 (76.47%), Postives = 121/153 (79.08%), Query Frame = 1
Query: 58 DTAEGLERELYLAKGAKVMLTKNLYQQVGLVNGIRGEVVELVYADDAPPPKLPLYVVVKFVGYSGGGL-------------------------VRTQLPLRRYWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPIEF 441
DTAEGLER+LYLAKGAKVML+KNLYQQVGLVNGIRGEVVELV ADDAPPPKLPLYVVVKF GYSGG VRTQLPLR WAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDL+VEP+ F
Sbjct: 266 DTAEGLERDLYLAKGAKVMLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSF 418
BLAST of mRNA_P-littoralis_Contig689.2.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE) HSP 1 Score: 186 bits (472), Expect = 4.250e-54 Identity = 100/135 (74.07%), Postives = 103/135 (76.30%), Query Frame = 1
Query: 112 MLTKNLYQQVGLVNGIRGEVVELVYADDAPPPKLPLYVVVKFVGYSGGGL-------------------------VRTQLPLRRYWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPIEF 441
ML+KNLYQQVGLVNGIRGEVVELV ADDAPPPKLPLYVVVKF GYSGG VRTQLPLR WAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDL+VEP+ F
Sbjct: 1 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSF 135
BLAST of mRNA_P-littoralis_Contig689.2.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE) HSP 1 Score: 183 bits (464), Expect = 4.390e-52 Identity = 101/147 (68.71%), Postives = 108/147 (73.47%), Query Frame = 1
Query: 1 PVAKVTAVHTGANAKRATADTAEGLERELYLAKGAKVMLTKNLYQQVGLVNGIRGEVVELVYADDAPPPKLPLYVVVKFVGYSGGGLVRTQLPLRRYWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPIEF 441
PVA+V+AVHTGANA+RATADTAEGLER+LYLAKGAKVML+KNLYQQVGL GG VRTQLPLR WAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDL+VEP+ F
Sbjct: 301 PVARVSAVHTGANARRATADTAEGLERDLYLAKGAKVMLSKNLYQQVGL---------------------------------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSF 414
BLAST of mRNA_P-littoralis_Contig689.2.1 vs. uniprot
Match: A0A2Z6QFX4_9GLOM (ATP-dependent DNA helicase n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QFX4_9GLOM) HSP 1 Score: 141 bits (355), Expect = 5.060e-36 Identity = 78/176 (44.32%), Postives = 105/176 (59.66%), Query Frame = 1
Query: 1 PVAKVTAVHTGAN-AKRATADTAEGLERELYLAKGAKVMLTKNLYQQVGLVNGIRGEVVELVYADDAPPPKLPLYVVVKFVGYSGGGLV--------------------------RTQLPLRRYWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPIEFRQ 447
PVAK+ A+HTG N AK+A +DTA GLE + LA+GA+VMLT NL +GLVNG G V ++++ +D PP LP+ V++ F Y G + R Q+P+R WAIT+HKSQG TL KA+IDLG KE GL+FV +SR + L DL+ +P F +
Sbjct: 1346 PVAKIQAMHTGGNEAKKADSDTAHGLEAYILLARGARVMLTANLQTDIGLVNGSMGTVQDIIFNEDQGPPCLPIAVLISFDNYKGPTITSLKGERVVPIAPIQRTWTGKSGVSCSRLQIPIRLAWAITVHKSQGLTLQKAIIDLGEKEFTAGLSFVAVSRVRALEDLLFKPFNFER 1521
BLAST of mRNA_P-littoralis_Contig689.2.1 vs. uniprot
Match: A0A6S7LS63_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7LS63_PARCT) HSP 1 Score: 132 bits (332), Expect = 1.570e-35 Identity = 71/173 (41.04%), Postives = 101/173 (58.38%), Query Frame = 1
Query: 1 PVAKVTAVHTGANAKRATADTAEGLERELYLAKGAKVMLTKNLYQQVGLVNGIRGEVVELVYADDAPPPKLPLYVVVKFVGYSG------------------------GGLVRTQLPLRRYWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPIEFRQ 447
P+A + A H+ A AK+ ++D GLE ++LAKGA+VMLT NL+ VGL NG G VV+++Y ++ PP LP+ V+V+F Y G G R QLPLR WA+T+HKSQG TL KA ID+G E G+++V +SR K L ++EP+ + +
Sbjct: 43 PIAHINARHSSALAKKISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPIAVIVEFENYRGPVFNESRPLCIPIYPITVTSQTEIGFHERQQLPLRLAWALTIHKSQGLTLPKAWIDIGKSERTAGVSYVAISRVKSLASCVIEPMTYER 215
BLAST of mRNA_P-littoralis_Contig689.2.1 vs. uniprot
Match: A0A7D9HJE5_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HJE5_PARCT) HSP 1 Score: 132 bits (332), Expect = 2.970e-35 Identity = 71/173 (41.04%), Postives = 101/173 (58.38%), Query Frame = 1
Query: 1 PVAKVTAVHTGANAKRATADTAEGLERELYLAKGAKVMLTKNLYQQVGLVNGIRGEVVELVYADDAPPPKLPLYVVVKFVGYSG------------------------GGLVRTQLPLRRYWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPIEFRQ 447
P+A + A H+ A AK+ ++D GLE ++LAKGA+VMLT NL+ VGL NG G VV+++Y ++ PP LP+ V+V+F Y G G R QLPLR WA+T+HKSQG TL KA ID+G E G+++V +SR K L ++EP+ + +
Sbjct: 69 PIAHINARHSSALAKKISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPIAVIVEFENYRGPVFNENQPLCIPIIPITVASQTEIGFHERQQLPLRLAWALTIHKSQGLTLPKAWIDIGKSERTAGVSYVAISRVKSLASCVIEPMTYER 241
BLAST of mRNA_P-littoralis_Contig689.2.1 vs. uniprot
Match: A0A6S7JIW3_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JIW3_PARCT) HSP 1 Score: 139 bits (349), Expect = 3.170e-35 Identity = 74/170 (43.53%), Postives = 101/170 (59.41%), Query Frame = 1
Query: 1 PVAKVTAVHTGANAKRATADTAEGLERELYLAKGAKVMLTKNLYQQVGLVNGIRGEVVELVYADDAPPPKLPLYVVVKFVGYSGGG-----------------------LVRTQLPLRRYWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPIEF 441
P+A++ A H+G+NAK +A GL+ + + KGAKVMLT NL+ VGL NG G +V+++YA D PP LP+ V+VKF Y G L R QLPL WA+T+HKSQG TL KA +D+G KE G+T+V LSRA+ L L++EP+ +
Sbjct: 917 PIAEICARHSGSNAKSVSAQEMFGLQPTILICKGAKVMLTMNLWASVGLCNGASGTIVDIIYAKDHHPPDLPIAVLVKFDEYRGPNFCSIPFCVPIPPVTASVNIDNKTLERQQLPLTLAWALTIHKSQGMTLEKAWVDIGKKECTLGITYVALSRARNLTSLVIEPMTY 1086
BLAST of mRNA_P-littoralis_Contig689.2.1 vs. uniprot
Match: A0A1X7VQQ4_AMPQE (ATP-dependent DNA helicase n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VQQ4_AMPQE) HSP 1 Score: 130 bits (326), Expect = 5.300e-35 Identity = 76/166 (45.78%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 1 PVAKVTAVHTGANAKRATADTAEGLERELYLAKGAKVMLTKNLYQQVGLVNGIRGEVVELVYADDAPPPKLPLYVVVKFVGY---------------------SGGGLVRTQLPLRRYWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPI 435
P+A + AVHTGANA + D A GLE + LA+ A+VMLT NL+ +VGLVNG G V + Y + PP LP+ V+V+F Y SGG R QLPL+ WA+T+HKSQG TL K VID+G KE GLTFV SR ++L D++ P+
Sbjct: 8 PIATIKAVHTGANAAKTPPDDAGGLEPVVMLARTARVMLTSNLWVEVGLVNGAMGTVEAICYKETMPP-HLPVAVMVRFDHYTGPTVHDGTVPITPIRHNWSSSGGQCSRLQLPLKLAWAVTIHKSQGLTLDKVVIDVGKKEFSCGLTFVACSRVRKLKDILFMPL 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig689.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig689.2.1 >prot_P-littoralis_Contig689.2.1 ID=prot_P-littoralis_Contig689.2.1|Name=mRNA_P-littoralis_Contig689.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=149bp PVAKVTAVHTGANAKRATADTAEGLERELYLAKGAKVMLTKNLYQQVGLVback to top mRNA from alignment at P-littoralis_Contig689:18811..19333+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig689.2.1 ID=mRNA_P-littoralis_Contig689.2.1|Name=mRNA_P-littoralis_Contig689.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=523bp|location=Sequence derived from alignment at P-littoralis_Contig689:18811..19333+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig689:18811..19333+ >mRNA_P-littoralis_Contig689.2.1 ID=mRNA_P-littoralis_Contig689.2.1|Name=mRNA_P-littoralis_Contig689.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=447bp|location=Sequence derived from alignment at P-littoralis_Contig689:18811..19333+ (Pylaiella littoralis U1_48)back to top |