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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 519 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 273 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791426.8540885-CDS-P-littoralis_Contig689:8203..8281 | 1680791426.8540885-CDS-P-littoralis_Contig689:8203..8281 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig689 8204..8281 + |
| 1680791426.8641138-CDS-P-littoralis_Contig689:16688..16883 | 1680791426.8641138-CDS-P-littoralis_Contig689:16688..16883 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig689 16689..16883 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791426.8847928-UTR-P-littoralis_Contig689:16883..17129 | 1680791426.8847928-UTR-P-littoralis_Contig689:16883..17129 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig689 16884..17129 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig689.1.1 >prot_P-littoralis_Contig689.1.1 ID=prot_P-littoralis_Contig689.1.1|Name=mRNA_P-littoralis_Contig689.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=91bp
SIVIRVGVRLHCSSRFERLCTTPPFVSLSITFPTVAFPCTFAQVTQADLN
AYPRMLVVCGILFAAIPCVYRILSFLHSPISLNTHRAYVL* back to topmRNA from alignment at P-littoralis_Contig689:8204..17129+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig689.1.1 ID=mRNA_P-littoralis_Contig689.1.1|Name=mRNA_P-littoralis_Contig689.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8926bp|location=Sequence derived from alignment at P-littoralis_Contig689:8204..17129+ (Pylaiella littoralis U1_48)
AGTATAGTTATTCGTGTTGGGGTACGTTTGCACTGCTCCTCCCGTTTTGA
GCGCCTTTGTACCACCCCACCATTTGTTGTCTCTGTTTGGGGGTACCCGG
CACTAGATACTGATCTACGGGGACCCTCGGGTATGTGTGTCATGGGACAT
GATGTCTCACTCTCTGGGAGCTCTCTCCCTCCAATAATCAAGGTCTTAGG
GTCAACCTTCCCGGCGCTTCTGACTCGGAGCTGTCTTCCTTCAAACACGA
TCGATCGGGCCTGTGTGGAGGCAGTGTGGTATTAGCGTTCGGACTGTGCG
AGACGCGTGTCACTATATTTTGGAACGCGGGCTGCACACTTTTTCTTCAT
CTGTGATCGTTGGTACGGCACTGGGAGCTGGTACAACGAAGCTGGTACAG
CAGAGGGAGCTGGTACAGCGGTGGTAAAACGGAGTTGGTACAGCAGTGAA
GCTGGTACAACAGAAGCTGGTACAGCAAAGGAGCTGGTACAGCAGGGCGG
TTTATATATCTGTGCACAGCGGAACTGGTGGCAGTTGGGGTATACGTAAT
AATATGGCTAGCACGGAAGAGGAAGCTGCAGGCATGAAAGCGCAGCTAGA
GATTGCGCAGGAGAGGGTCGTCGCTCTTGAGGCAACAAATAAAAGATTGG
CGGAGCATGAGATGCTTCGGACGACAACGCCAGCGGATACATTCGTCGGC
AGACAAGCTGGTGGAGGCTCAGTTGATCATGGGAGGAGACCTTCACCAAT
TCGGCCAATGTGGGCGAGTGGGGTGAGTCATGGTGTTGGCTTGGGACAAG
GATTTCCTCGGAGTGTGGTTCCAAAATTTCCCGCTGACTGCACCCCAGCC
GAGTACGTCGGTTGGCAGCGATGTTTTCGACTAGCCCTCACCAACCTTGG
CTTGGGCTACACCATCGCATCCAACGCACCTGAGATCCCAGTAATCAGTT
GTACCGATGATGCGTACCTCACTAGGCAGTATGAAGAGGAGATTATCGCT
GAACACCGACGGGCATGGGGAATATTGAGTGATGCGACATTTGGTGCTCC
CTTTGAGAACAACCTGTTTAAGTGTGACTCTGTCATGGGTGCGTGGAGGG
TCATCGAATCATGGGCGTTGCCCATGCAGCCCGCTGAGAAGCAACTACTC
ATCACTCAACTAGAGCAGGTTAAGTTTAAGGGGGACGAGGACCCCAAGCT
CTTCTTCGCACGGATCACAAACCTAGAGACGACCCTGCGTGCTGTTGGCG
TAATTAAAAAGGAGGAAGAAATCGTCCAAATCATCCTCCGTCAGCTTCCT
ACCCGATACGAGGTTGCCAAGCAAGTCGCTCTCACCATCAACAGCCTCAC
CCGTGCCCATCTGGAGGATAACATCCGTACCACGTACGCCACTCGTAAAG
CTCACGAAATTGCGAGACAAGGGTCGGCGGCCGCACCGCCAGTTGCTCAT
TCTAATCCACATGCTCTCGTCATTGGACGTGGTTACGGACAAGGGGGTAA
CGGTGGGTTACGGGGGAGCGGGGATCACCGGCGGGTTGGCGGCATGGCTG
GTGGAGGTCGTGGGTCACACTGGTCCGCCGGTGGAGGCGTTGCCCAGCAG
CAGTGGTCCCGTGGTGGCGGAGTACCACAGATGCAGCAGCAACAGCAACA
ACAGCAACAGATCCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGC
AGCAGCCGCAGCTGCAGCAATGGTCCAATGGAGGCGGTGGGCATCCGCAA
TTACCGCCCCAGCAACATCACGTGTCATTTCAGCAGCGTCAGCAGCAGGT
ACGGCCTCAGTTGCAGTCTGAGCGCCCAAAGTTGGGGGTTGGTGGGGTGT
ACGACTGCGGTAGCAACGCCATGTACTACCAGGCAGAATCGCCCCCCCCC
CGCCGGTGCCCGAATGGGCGTTGTCTTTCAATGCGGCAGGTGCGGTAGAC
TCGGACACAAACCTCTCTTCTGTAGTGCACCGCGTAGGTTTGAAGGTACT
TGCATCTGCTGCAATCAGTATGGGCATACTTTCCGCAACTGCGTCACCAA
TCGGGGTACAGGTGTACTGCCCCTGCACGCGAACGTCCTCACCACCGATG
GGGGAAACTACTTTGACGGAGATTGGCCGCAGCACGAGTCCCCACTCGTT
CACGCTCCACAACAGCAATCGTCGGACGGCATATCCTACGGCGATGGCAC
ACCGGACGGAGGCTGGAGCGGGGGATGTGCGGGCGTTACCAAAATGCAGC
CATCGGTCGAGGGGACGGACCAGCAGTCTTTCGTTGGCGTAGATCAAAGT
GGTGACGGCGAAAGTTGGAACGTTACTGCGTTGCAGCAGCAGCAGCAGCA
GCAGCAGATTGAAGACGAGCTGCAGCACGACGTCGTTGTGATGGAAGCTA
ACAGCACGGGGGGGGGCACTTCAGATGGCGATGGGGTGGTAATGAGTCGC
CCTCTTTCCAACACAATCGGCAACGATGGCGAACGTGCTTTCGGGGGATT
TTTTGCGCTGCAGCTTGCTTGTTCTGTATCTCAACTTCCCCCTTTTCTCG
CCGTAGCTGCCCTTTTCCCGGACCGGCGTCCAGGTTCCAAAGTCTTCCTG
GAAGACACCGGGGCTGTGCTCCACGCCGTGTCTTCAGACGAGCATGTGTT
CAACAGGCGGCAACCGCGTCCGGAAGAGCGGCAGGTCATGCTCGGTGACG
GCAAGTGTATACGCGTCGCATGTTTCGGGGACTTGGCTTTGGACTTGCAC
TGCGATGAGGACGTACGGGTGCTGCTTACGAACGTTGCTGTCGTGCCCGA
TCTGGCCTTTGAGATTCTGTCTTTCAATCGCATGCAGGAGGGGCACGAAA
TCGTTCTGAATCACGAgGGGGCTCACATGCTCGAGGGGCGGGTCCGGTTC
AAGAAATTTCAAGCCGGTAATTTCATTCAAGCGACCCGCATCCCGTACGA
TGACACATTTCCTGAACCCCCCCAACCCCCCGCGATGGTCGCGGCGTTGA
TGCGGCCGGGCCCGCTACCCAGCATGGACATCAACGATTTCCACCACTCT
CTCGGCCATGCCAACATCAAAGCTTTGTCCGAGACTGCCAAACAAATGGG
CATCAAGCTCACCGGTATCCAGGGGTACTGCGACGGGTGTGCGGCGGCGA
AGGCAATTAAACGTACCGTTCCGAAGATCGTCAACTCCTCCCGCAAGTCC
TCGCGGCCGTTCCAGCGGGTCTTCATAGATCTGGCCGGTGGGTACCCGAA
ATCCACCGGCAATGCTAAATTCCTCATGCAAATCTTGGATGACAACACCA
ACTTCGGGTGGGCCGTGTTCTTAGAGGACAAGAGCGGCCCGAACGTCGCT
CGCGCGTTCAAGCTGTGGCACACCTCCATCCAGCGGCTCAGGAACGTTCA
CGGAGAGGTGGAATGTGTTCTGACGGACAATGGTACTGAGTGGGTCAACG
AGGGCTTTCGGCGCATGCTGGAGGATTTGAACATCGCGCGGGAACTCACG
GCGGTAGATGGGCCCAAGAGCAACGGTCGTGTGGAACGCAGGATTGCGCT
GGTTGCAGAAGGGGCCAAAGCTGCGTACCTGGAGTTCCCAACATTGTTTC
CCGACATCGTTTTCCCCACACGCGCGTATAACTTTTCTGCTATCTGGCCG
GAGGCTTTCTCGTGGATGAACGACTGCCTGAATATCACGGCGGAATCGAG
CAAGGAGGACAAGCGGTGCCCCGAAGAGAAGCTGTACGGGAAGAGGAGGA
TGCAACTGGCGCTACCGTTCATGATGCCTGGCTACCGTCACCGCAATCGT
CCAACGAAAATGCACAACAAAGGGGAGCGATGCTTCTACCTCAACTCAGG
CAACGATCACTCCTCTTCAACTCAAAAAGTCATCACTCCAGCGGGAATTG
CGACGTACTCGGCACACTGCACGTTCGGCTACCGCCGCCAGCCTTTCCAA
GGTGAGGTGCCGACTTGGGGGGCGGGCGCCGTAATCTCGTCGAGGCCGTG
GCCCTCTGAGGCGACGGCGGCGGCAGCATCTGCACGGGGTGGAGGTCATT
CTCCCGCGGCCCCGGTGCCGGTCATGGCGCCGGGGGGAGCAGCATCGGCG
GCAGCGGCGGCATCATCTGCCCGCGGTGGAGGTCTTTCTCCTGCGGCCCC
GGTGCCGGTCATAGCGCCGGGGAGCAGCATCGGCGGCAGCGGCGGCATCA
TCTGCCCGCGGTGGAGGTCATTCTCCCGCGGCCCCGGTGCCGGTCATGGC
GCCGGGGGAGCAGCATCGGCGGCAGCGGCGGCATCATCTGCCCGCGGTGG
AGGTCATTCTCCCGCGGCCCCGGTGCCGGTCATGGCGCCGGGGGAGCAGC
ATCGGCGGCAGCGGCGGCATCATCTGCCCGCGGTGGAGGTCATTCTCCCG
CGGCCCCGGTGCCGGTCATGGCGCCGGGGGGAGCAGCATCGGCGGCAGCG
GCGGCATCATCTGCCCGCGGTGGAGGTCATTCTCCCGCGGCCCCGGTGCC
GGTCATGGCGCCGGGGAGCAGCATCGGCGGCAGCGGCGGCATCATCTGCC
CGCGGCGGAGGTCTTTCTCCCGCGGCCCCGGTGCCGGTCATGGCGCCGGG
GGGAGCAGCATCGGCGGCAGCGGCGGCATCATCTGCCCGCGGTGGAGGTC
ATTCTCCTGCGGCCCCGGTGCCGGTCATGGCGCCGGGGGAGCAGCATCGG
CGGCAGCGGCGGCATCATCTGCCCGCGGTGGAGGTCATTCTCCCGCGGCC
CCGGTGCCGGTCATGGCGCCGGGGGAGCAGCATCGGCGGCAGCGGCGGCA
TCATCTGCCCGCGGTGGAGGTCATTCTCCCGCGGCCCCGGTGCCGGTCAT
GACGCCGGGGGGAGCAGCATCGGAGGCAGCGGCGGCATCATCTGCCCGCG
GTGGAGGTCTTTCTCCCGCGGCCCCGGTGCCGGTCATGGCGCCGGGGGAA
GCAGCATCGGCGGCAGCGGCGGCATCATCTGCCCGCGGTGGAGGTCATTC
TCCCGCGGCCCCGGTGCCGGTCATGGCGCCGAGGGGAGCAGCATCGGCGG
CAGCGGCGGCATCATCTGCCCGCGGTGGAGGTCTTTCTCCCGCGGCCCCG
GTGCCGGTCATGGCAGCGGGGGGAGCAGCATCAGCGGCGGCGGCGAAGGC
CACATCTGCCCACGATCGCGGTCTTTTCCCCACGGCCCCGGTGCCGGTCA
TGGCGCAGGGGGCAGCAGCGGCGGCGGCGGACACGGACGCGGGTGAGTTT
GGGGCACGGGGAGCGCGTGCTGAGGTGTTGGCGGAAGTTTCACGGCTGGC
TGAAGACGCTTATCAGGCTGGTCGCGGTGTATTGCATGCCGCTCCGCCTG
CCTCCGCCCATTCTGTGCCGACGCCACCGATATCAGAGGAGGAGATGTGG
GCAGAGATCGTGCACGACGGCGCTGCTGTCGTTCGTCATCGGGGGCAGCC
GGAGTTGGTGGCGACGCCTGCCCGGACGAGGGGGCGGGCCAAGGCGGAGC
GAGAGGGTCTACAGCCGGGTGCTTTTGCTCTCATGGCCATGCAAGATGAC
ATCGTGCGGTCTGTCCACACTGAGCCGTTGCCGGACTCGCTGCCACCGGA
GCTACCTGCGGGACCCGCTTGCGATTTGGAGACGCCGGAGACCTATGCGC
AGGCACACGCCGGGCCACACAGCTGGATTTGGCAAGAGGCACAGGACAAG
GAGCTCGGTGGACTTATCGCGTCGGAGACTTTTTTGGCGATGGCGGGGGT
GTAGCAACGAGGTGCCAACGTCATATCAGCCAAGTGGGTGTACACGTGGA
AAGTAGACGAGTTCGGACATGTTGTGCGTGCTAAGGCTCGGTTGGTCGCA
CGCGGATTTGCACAACGAGAAGGTATCGATTTTTTTGAAACTTTTTCGCC
CTGCCCCTCTGTCACAAGTATTCGTTTGTTGGCTGCCATCGCGTGTGAAC
TTGGTTGGGACTTATGTCATTTTGATGCCGAGCAGGCGTTTGTTCAATCG
AAGTTGGATGAGGTTGTGTTCGTTCGTCTTCCCCCTGGTTGCGGTGTGCT
CTCTGGCAAAATCGTGAGATTGCGAAAGAGCCTTTATGGCTTGCGTCAGG
CGTCACGGACATGGCACCATCATTTGATGCGTGGTATGAAGAGTCTGGGT
TTCGAGTCCTGTGCTGCCGATGCGTGCGTGATGCGCCTGATTGAGCACGG
TAAGGTTGCTATGGTTGTTGTCGTCCACGTCGATGACGTATTTTCTATCG
GACGTAAGAACCGGTGTGACCAGTTTGGTGCTGACCTCCACCGCTATGTG
CCCATCTCCAACCTTGGCGAACTTCGCTGGTACGCTGGTTGTCGGTTCTC
TCGTGACTCTGTGATGGGTACTGTTACGATTTCCCAGCAAGCTGTAGCGG
AGAAGATGGTTGCCAAGTTTGGTGTGACGGAGAATAAGGAGACACTCATG
GTTGTCGGCTTGAAGCTTGAGCAATTTGACGAAGACGAACCCGATGTCGA
CGAGCCCTTTCGGTCGCTGGTAGGACATTTGATGTGGCTGGCGAACCAGA
CTCGCCCCGATATTCTCAATGCGGTGCGGTCCGTAGCGAGATATTCGCAC
TCGCCGAAACAAATGCACTGGCACGCGGCGCTGCATGTTTTGATGTACAT
TCGGTTCACGAGTGATTTCGGCATCACCTTCCAACGAGGTACGGTCGGGG
GAGACTGCATGCAACTTTTTGTCGACTCGGATTTTGCCAGCAAAGCCGCC
GGCCGCCGGTCTGTGTCTGGTGCGGTCATGATGTTTGCCGGTGCGTGTGT
GATGTACTTGTGTCGAACGCAAAAGAGTGTTGCTCTGTCTTCAACCGAGG
CGGAGTACGTGGCCCTGGCGGACGGACTGAAGGAGGCTATTTTTTTGCGG
TATCTCTGGAGTTTTATCTTTCCGGACAGGGATGTGGGTTGCACCTTGGT
CCATGAGGATAACGTCGGAGCCATTCACCTGACAAGTAACCCGGCTACCA
CGCCGAACTCCAAGCACATTGACATCCGCCACCATTTCATTCGTGAGCGT
GTTGCCAGGGGAGAATTTAAGGTGCTTCACGTACgGGTCCGACCTTCAGC
GCGCCGGTTTTCTCACCAAACCCCTGCCCAAGGAGGCTTTCTGCGCCCAC
CGTGATTACGTTATGAACATTCGTTGATTTTTTTTTTTCTTTTCCGGTGT
TTGCTTTTGTTTCTGCTGGACTGCTATTGTTGTTGTTTTTATAACGGACA
AGGGGCGCTTTCATTTATTTTTTATTTTTTATTTTTTTCGCACTTGCAGT
GTTGGTTTATGGTTTGTTTTCCGGTTTTCAAGGTGGTTTAAGTGTCGAAC
TGACGGATTTATTTGGCGTGCCGGCTTGGCCGGATCGTTGACGTTCAGAG
TACGTGCTGATTGTACTGCAGTCGACAATCATGGGGGGAGGATTGTGTTC
CATGATCCTCGTCGCAGTATCAGCAGACTTTTTCACGATTTGCATTTTTT
GTAATTTGATTCAGGTCAGAGGTGTTCCCGGAGAAATCGAACGGGGATTC
TGTGTCGTAGCACATTTATTCTGGTTTTATCTTGCAGTTTCCCTCTCAAG
GCggGGGGGGGAACTTGTTAACAGGTGGCACGGGAAAGTTAATACTTTGT
ATGATCGAGAAACATTTCTATTACTGTTTGCGTTTTTCCTGCGGATAGTT
CAGAGAAACCTCGTGTTTTCTGGTTTCAACTTGCAGTGCCGCGAAATATG
GTGCGAGGCTGCTAACAGACACGAAAGTTTGATGATGCATTTTAATTTGT
TTCCATGTCCGGAAGGAATGTTACAGCAGGGGGGCTGTTGGATATTGGTT
CTCATGTGATGTGTAGAAGCTGCAGTAGTACTAAAGATGAAGGTTTTCCG
TGACGTTTCCGAACACGTTGGGATTACACCTCGTGTGTTTACTATTTTGC
TTTTCTTTGATGGAATGTTGATTTTTGTATGGATGTTTTCTAAGGATAAT
TCAGATATTCCGACGGCTTGAGAATTTGTTTTTGATGATTGGCGTCGTTA
AATTCTCAAGGAGGGTTATTCGTTTATTGACAGACCTTTCAAGTTCATAC
GGGGGGAATCAGAACTTGATATCATGAGATTCGGAAAATCTCGTAGAACA
GAGTTTTATTGGGAGATCGACAGATTTCGTAGAACAACGTTTTATTGGGA
GATTTGATTGAATTGGTAGTATGATGGATGATTTTTGGTTTTGAATTTGG
AATTATTGCCGTTTTACCTGGTGATACGTAGAGCATTCCCTAGATCGTAT
CGAGTACCGAGTAGGGGGGCTGTTTGGGGGTATCCGGCACTAGATACTGA
TCTACGGGGACCCTCGGGTATGTGTGTCATGGGATATGATGTCTCACTCT
CGGGGAGCTCTCTCCCTCCAATAATCAAGGTCTTAGGGTCAACCTTTCCG
GCGCTTCTGACTCGGAGCTGTCTTCCTTCAAACAGTCTCTATCCATTACG
TTTCCTACAGTCGCTTTTCCATGCACTTTTGCGCAAGTTACGCAAGCAGA
TTTGAACGCATACCCGCGTATGTTAGTGGTGTGTGGCATCCTTTTCGCTG
CGATCCCGTGCGTTTATCGCATCTTGTCCTTTCTACATTCCCCTATTAGC
CTTAACACCCACCGGGCTTACGTCTTGTAGCTCGGCAATTTTATGCGGCA
CTTTCGCCTTATTATTAGTGGTGTGGGGGATGGTTTGGATTACTTTCGTG
TAGAACCCTTAAGGGGTAGTTTTGCGTAGAACCCTAACCTTTTTTGTAAC
GGATTGAATAACCAAATCTTCGATCCATTTGGGATACTATTTTGGATTTA
TTTGTATAGGGTCTGCAAATGTTGAGTATTCTGGGTGGGCTAGTGTTACG
GAGCATACCTCTTATCTTCCGTATGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig689:8204..17129+ >mRNA_P-littoralis_Contig689.1.1 ID=mRNA_P-littoralis_Contig689.1.1|Name=mRNA_P-littoralis_Contig689.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=273bp|location=Sequence derived from alignment at P-littoralis_Contig689:8204..17129+ (Pylaiella littoralis U1_48)
AGTATAGTTATTCGTGTTGGGGTACGTTTGCACTGCTCCTCCCGTTTTGA
GCGCCTTTGTACCACCCCACCATTTGTTTCTCTATCCATTACGTTTCCTA
CAGTCGCTTTTCCATGCACTTTTGCGCAAGTTACGCAAGCAGATTTGAAC
GCATACCCGCGTATGTTAGTGGTGTGTGGCATCCTTTTCGCTGCGATCCC
GTGCGTTTATCGCATCTTGTCCTTTCTACATTCCCCTATTAGCCTTAACA
CCCACCGGGCTTACGTCTTGTAG back to top
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