mRNA_P-littoralis_Contig688.13.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig688.13.1
Unique NamemRNA_P-littoralis_Contig688.13.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig688.13.1 vs. uniprot
Match: D8LL82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL82_ECTSI)

HSP 1 Score: 613 bits (1580), Expect = 4.160e-214
Identity = 355/476 (74.58%), Postives = 379/476 (79.62%), Query Frame = 1
Query:    1 MRRALQATRCCSLRPPQPXXXXXXQSRKQSFHVYTHGEGFLGALGHGDFSAREVATPVDALASRDLCSASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLVPLVVTAVNALASSREVLPSPVSVPLVAEPGEENSKSDTIAAAFRDNRPERTRKQHEQPLPPPPSSDHIRAKSVACSAALTVVLGEDGRVYCMGYNRWGQCGQGPENVFTVFKPLRVGCGNTSSSVGGRGALLEHEKITKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIGGEMTELPEQVDLPGNVVDLRSXXXXXXXXXXXXXXXXXXKMQGTAVKKEGRVPVYEDQLYPRKVDIVGGGRAVEAFCSSFNTLLRMEDGRILMSGLEADTRNTVHSPKEVDIPASDPGSFFSGFNDTIVRTRRTLRKETTT---VFPPDNGVDVPDFHRVSFTSTGASVSPFYLPGLT-GRRVDSVCVGWQHTVALVH 1416
            MRRALQATR  S  P +P      QSRK++ HVYTHGEGFLGALGHGDFSARE A PV ALASRDL   SAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRL P VVTA+NALASSREVLPSPVSVPL+AEP   ++ S T+ AA  D RP           PP PSS  +RAKSVACSAALTVVLGEDG+VYCMGYNRWGQCGQGP+NVFTVF+PLRVG           G  LE E + KLAVGFQQVLVLCESGRVFGWGKGLRGQLG+GGEM ELPE+V+LPG VVD   XXXXXXXXXXXXXXXXXX MQGT VK +GRVPVY DQLYPRKVD VGGGRAVEAFCSSFNTLLRMEDGR+LMSGLEADTR TV +P EVDIPAS+PGSFFSGFNDTIV+T  T    T T         G D+P FHRVSFTS GA V+PF LPG+  G RVDSV VGWQHTVALVH
Sbjct:    1 MRRALQATR--SSLPSRPRHHH--QSRKRALHVYTHGEGFLGALGHGDFSAREQALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVSVPLMAEPAAASTAS-TVTAALHDARP-------SLHFPPTPSS--LRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVG-----------GRALEREAVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMMELPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGRVPVYHDQLYPRKVD-VGGGRAVEAFCSSFNTLLRMEDGRVLMSGLEADTRRTVPTPVEVDIPASEPGSFFSGFNDTIVKTASTPVASTITDKSTAAGGTGADLPTFHRVSFTSAGARVTPFALPGVPEGTRVDSVSVGWQHTVALVH 450          
BLAST of mRNA_P-littoralis_Contig688.13.1 vs. uniprot
Match: A0A6H5JG88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG88_9PHAE)

HSP 1 Score: 593 bits (1528), Expect = 3.090e-206
Identity = 344/473 (72.73%), Postives = 369/473 (78.01%), Query Frame = 1
Query:    1 MRRALQATRCCSLRPPQPXXXXXXQSRKQSFHVYTHGEGFLGALGHGDFSAREVATPVDALASRDLCSASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLVPLVVTAVNALASSREVLPSPVSVPLVAEPGEENSKSDTIAAAFRDNRPERTRKQHEQPLPPPPSSDHIRAKSVACSAALTVVLGEDGRVYCMGYNRWGQCGQGPENVFTVFKPLRVGCGNTSSSVGGRGALLEHEKITKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIGGEMTELPEQVDLPGNVVDLRSXXXXXXXXXXXXXXXXXXKMQGTAVKKEGRVPVYEDQLYPRKVDIVGGGRAVEAFCSSFNTLLRMEDGRILMSGLEADTRNTVHSPKEVDIPASDPGSFFSGFNDTIVRTRRTLRKETTTVFPPDNGVDVPDFHRVSFTSTGASVSPFYLPGLT-GRRVDSVCVGWQHTVALVH 1416
            MRRALQATR  S  P +P      QSRK++ HVYTHGEGFLGALGHGDFSARE   PV ALASRDL  ASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRL P VVTA+NALASSREVLPSPV VPL+A+P   ++ S TI AAF D RP          LP P S   +RA SVACSAALTVVLGEDG+VYCMGYNRWGQCGQGPEN FTVF+PLRVG           G  LE E++ KLAVG QQVLVLCESGRVFGWGKGLRGQLG+G E  ELPE+V+LPG VVDLRS XXXXXXXXXXXXXXXXXKMQGT VK +GRVPVY DQL+PRKVD VGGGRAVEAFCSS NT+LRMEDGR+LM G EADTR TV +P EVDIPAS+PGSFF GFNDTIV+T                 VD+P FHRVSFTS GA V+PF LPGL  G RVDSV VGWQHTV LVH
Sbjct:   17 MRRALQATR--SSLPSRPRHHH--QSRKRALHVYTHGEGFLGALGHGDFSAREETLPVAALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVPVPLIAKPSAASTAS-TITAAFHDARPS------SYSLPAPSS---LRANSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENEFTVFEPLRVG-----------GRALEREQVVKLAVGLQQVLVLCESGRVFGWGKGLRGQLGVGDETMELPEEVELPGKVVDLRSGXXXXXXXXXXXXXXXXXKMQGTEVKTDGRVPVYHDQLHPRKVD-VGGGRAVEAFCSSSNTMLRMEDGRVLMWGFEADTRRTVPTPVEVDIPASEPGSFFGGFNDTIVKTT--------------TAVDLPTFHRVSFTSAGARVTPFTLPGLAEGTRVDSVSVGWQHTVVLVH 449          
BLAST of mRNA_P-littoralis_Contig688.13.1 vs. uniprot
Match: A0A8K1FR76_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FR76_PYTOL)

HSP 1 Score: 129 bits (323), Expect = 2.150e-27
Identity = 104/352 (29.55%), Postives = 146/352 (41.48%), Query Frame = 1
Query:   97 VYTHGEGFLGALGHGDFSAREVATPVDALASRDLCSASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLVPLVVTAVNALASSREV---LPSPVSVPLVAEPGEENSKSDTIAAAFRDNRPERTRKQHEQPLPPPPSSDHIRAKSVACSAALTVVLGEDGRVYCMGYNRWGQCGQGPENVFTVFKPLRVGCGNTSSSVGGRGALLEHEKITKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIGGEMTELPEQVDL--PGNVVDLRSXXXXXXXXXXXXXXXXXXKMQGTAVKKEGRVPVYEDQLYPRKVDIVGGGRAVEAFCSSFNTLLRMEDGRILMSGLEADTR 1137
            +Y++GEGFLGALG G+++  E+ TP+       +   SAGW H+  V  D G+  V+GR    +  +R   + RL P ++  +NA     E+   LP+ V +P                                         +  + K + CS ALT  L E G+++ MG N +GQCG G E V +V  P  V  G             E E +  +A GFQ  LV+  SG VF WGKG RGQLG G    + P++V      NVV + +                  K+     K E       DQ+ PR +      R  E  CS F+T    ED R  + G     R
Sbjct:   29 IYSYGEGFLGALGTGNYANVELPTPLPTTTDLTIRELSAGWAHAGFVTED-GDAYVYGRTHSFRDVIRATNMNRLTPWLLRWINAFTMRTEIDTLLPAKVQLP-----------------------------------------EGEKVKKMVCSTALTFFLTESGKLFTMGANFYGQCGTGEEGV-SVLTPTHVRIG-------------EDEPVADIAAGFQHGLVVTTSGNVFSWGKGERGQLGFGTANVKTPQEVIALKNRNVVSVSAGFNHSSALTKDGELFLWGKLLNPKGKDESN----GDQVTPRLIKTRDAVRLQE--CSHFHTTFITEDHRAWVVGRTPSAR 318          
BLAST of mRNA_P-littoralis_Contig688.13.1 vs. uniprot
Match: A0A5D6XTS7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTS7_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.410e-24
Identity = 98/345 (28.41%), Postives = 145/345 (42.03%), Query Frame = 1
Query:   97 VYTHGEGFLGALGHGDFSAREVATPVDALASRDLCSASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLVPLVVTAVNALASSREV---LPSPVSVPLVAEPGEENSKSDTIAAAFRDNRPERTRKQHEQPLPPPPSSDHIRAKSVACSAALTVVLGEDGRVYCMGYNRWGQCGQGPENVFTVFKPLRVGCGNTSSSVGGRGALLEHEKITKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIGGEMTELPEQ-VDLPGNVVDLRSXXXXXXXXXXXXXXXXXXKMQGTAVKKEGRVPVYEDQLYPRKVDIVGGGRAVEAFCSSFNTLLRMEDGRILMSG 1119
            VY++GEG+LGALG G ++     T ++  A+      SAGW H   V    G+  V+GR    +  +R   IQR+ P ++   N     R V   LP+ V++P                                         +  RA+ + CSAALT+VL E GR++  G N +GQCG   E V +  +P+RV               L+ + +  +A G+Q  L +  SG VF WGKG RGQLG G    + P++ + L G  V   S                   + G  +  EG+     DQ+ PR V        ++  CS F+T     D +I + G
Sbjct:   29 VYSYGEGYLGALGTGAYAGVAQPTALEEPAALGATQLSAGWAHGGFVS-SAGDTFVFGRALSFRDVIRSTNIQRVAPWLLAWTNEFTRRRGVDTLLPARVALP-----------------------------------------EGERARKLVCSAALTLVLAESGRLFAFGANTFGQCGNDREGV-SEPEPVRVA--------------LDGDDVVDVAAGYQHALAVTRSGAVFAWGKGERGQLGFGSANVKAPQELIALKGKAVAAVSAGFNHSSALTRDGELF---VWGKLLNLEGKDENGGDQVVPRLVRTSDAVTLLQ--CSHFHTAFLTADDKIWVVG 311          
BLAST of mRNA_P-littoralis_Contig688.13.1 vs. uniprot
Match: A0A484E934_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E934_BRELC)

HSP 1 Score: 115 bits (289), Expect = 3.670e-24
Identity = 104/388 (26.80%), Postives = 164/388 (42.27%), Query Frame = 1
Query:   97 VYTHGEGFLGALGHGDFSAREVATPVDALASRDLCSASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLVPLVVTAVNALASSREVLPSPVSVPLVAEPGEENSKSDTIAAAFRDNRPERTRKQHEQPLPPPPSSDHIRAKSVACSAALTVVLGEDGRVYCMGYNRWGQCGQGPENVFTVFKPLRVGCGNTSSSVGGRGALLEHEKITKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIGGEMTELPEQ-VDLPGN-VVDLRSXXXXXXXXXXXXXXXXXXKMQGTAVKKEGRVPVYEDQLYPRKVDIVGGGRAVEAFCSSFNTLLRMEDGRILMSGLEADTR----NTVHSPKEVDIPASDPGSFFSGFNDTIVRTRRTLR 1242
            + ++G+GFLGALG G +      TP+    +  +   S GW H+  V  D G+  ++GR    +  +R   +QR++P +V  +N+   SR V                    DT+  A             E P       D  R K + CSAALT +L E G+++ +G N +GQCG G E V +V  P  V                + +K+  +A G+Q  L + E+G VF WGKG RGQLG G   T+ P++ + L G  +V + +                  K+    +  +G      DQ+ PR V      +  +  CS F+T     D +I + G     R    N +H   ++        S     N+ +VRT+  ++
Sbjct:   34 LLSYGDGFLGALGTGGYDDVVAPTPLATTTALSVKEISVGWAHAGFVT-DQGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWWMNSFTRSRGV--------------------DTLEPALL-----------EMP-------DRERVKKIVCSAALTFILTECGKLFTLGANGYGQCGIGEEGV-SVQLPTHV--------------RFDGDKVVDIASGYQHGLAVTENGTVFCWGKGERGQLGFGSGNTDAPQELIALKGKRIVKVDAGFNYSCAITEDGELYVWGKL----LNPKGMSEANGDQITPRLVQTSDAVKLSK--CSHFHTSFITADNKIWLLGRTPSGRRNENNFIHEAPQMYT------SPLQITNERVVRTKDIVK 355          
BLAST of mRNA_P-littoralis_Contig688.13.1 vs. uniprot
Match: A0A196SGG2_BLAHN (Ankyrin repeat-containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGG2_BLAHN)

HSP 1 Score: 109 bits (273), Expect = 4.870e-22
Identity = 115/455 (25.27%), Postives = 187/455 (41.10%), Query Frame = 1
Query:   85 QSFHVYTHGEGFLGALGHGDFSAREVATPVDALASRDLCSASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLVPLVVTAVNALASSREVLPSPVSVPLVAEPGEENSKSDTIAAAFRDNRPERTRKQHEQPLPPPPSSDHIRAKSVACSAALTVVLGEDGRVYCMGYNRWGQCGQGPENVFTVFKPLRVGCGNTSSSVGGRGALLEHEKI-TKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIGG-EMTELPEQVDLPGNVV--DLRSXXXXXXXXXXXXXXXXXXKMQGTAVKKEGRVPVYEDQLYPRKVDIVGGGRAVEAFCSS-FNTLLRMEDGRILMSGLE-ADTRNTVHSPKEVDI-------PASDPGSFFSGFNDTIVRTRRTLRKETTTVFPPDNGVDVPDFHRVSFTSTGASVSPFYLPGLTGRRVDSVCVGWQHTVAL 1410
            +S  VYT+G+G +GALGH D++ RE    VD+L  R +   + GW H+  V  D GE++++GR  D++  +    +   +P V+ + N                          K+  I   F    P                 +  +   VA S AL+  L +   +Y  GYNR+GQCG   ++V  ++ P +V              +L+ ++I  KLA GFQ    LCESGRV+ WGK   GQLG G  +MT  P  +D   ++   D+ +                  K  G    ++    ++ D  YPR V +      ++ F S  F+       G++   GLE ++T  T+    + D        P     S   G     +R ++     T +    D+G    D ++ ++ S  A V       L   +V+ +  GW+H + L
Sbjct:   31 ESLSVYTYGKGAIGALGHNDYNDREYPCRVDSLEGRGIHKIACGWAHNCLVDGD-GEMVIFGRTQDVRNIIGAGNMISYLPKVIRSFNNFF-----------------------KNTVIETRFPSVLP----------------IEDGKCVDVAASMALSFCLTDTHHIYAYGYNRYGQCGVDMKDV-NLYAPKQV--------------MLDEDEIPVKLACGFQHACCLCESGRVYAWGKANHGQLGRGDVDMTFKPLLMDTDASIHYRDVYAGFSSSILISDDGKLYIAGKYWGDGQNRKN-AKMFGDSTYPRLVPL---DHQIDLFASGQFHMTYTDTKGQLYQLGLEDSETCRTIEEESKRDESKRMHREPVPVDMSSIQG-----IRFKKLRCSFTESYGITDDG----DVYKWNWLSPPAKVKI-----LDEIKVEDISFGWKHVLVL 412          
BLAST of mRNA_P-littoralis_Contig688.13.1 vs. uniprot
Match: A0A7S2XT67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XT67_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.990e-19
Identity = 89/274 (32.48%), Postives = 128/274 (46.72%), Query Frame = 1
Query:   79 RKQSFHVYTHGEGFLGALGHGDF--------------SAREVATPVDALASRDLCSASAGWTHSAAVCRDTG----EVLVWGRPFDLKQPLRINRIQRLV--PLVVTAVNALASSREVLPSPVSVPLVAEPGEENSKSDTIAAAFRDNRPERTRKQHEQPLPPPPSSDHIRAKSVACSAA--LTVVLGEDGRVYCMGYNRWGQCGQGPENVFTVFKPLRVGCGNTSSSVGGRGALLEHEKITKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIG 834
            +++   VY  G+G+ GALG  DF              S  EV    D      + +A+AGW HSA + +D      +++V GRP D +  LR+ RI   +  PL+  + +         P+     + A  G+   K  TI+    D    RT   H   +P P   + I + SV  SA+  LT V+G  G++Y MG N  GQCG    N   V+ P  V   +T+    GR  L +   I  +A+G Q  L + E G +F WGKG RGQLG+G
Sbjct:   50 QRRGMAVYVSGDGWTGALGSPDFVDFTRPAENSEEAFSLTEVKQYADQTPFSGVIAAAAGWGHSALIIQDPSTKEKKLMVCGRPQDFQNLLRLRRIPPFIRSPLMKRSFDQFYEPDRDQPTMFDQLIDAMIGD---KHPTIST---DRNLTRTVFPHFVTVPLPDDDEPIESSSVVLSASVGLTAVVGASGKLYTMGINSRGQCGVEFSN--NVWTPTPVVGLSTAFPSEGRPKLQQESNIVSVALGLQHGLAIDEQGSLFSWGKGHRGQLGLG 315          
BLAST of mRNA_P-littoralis_Contig688.13.1 vs. uniprot
Match: A0A7S1CCH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCH6_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.910e-19
Identity = 80/256 (31.25%), Postives = 112/256 (43.75%), Query Frame = 1
Query:   79 RKQSFHVYTHGEGFLGALGHGDFSAREVATPVDALAS--RDLCSASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLVPLVVTAVNALASSREVLPSPVSVPLVAEPGEENSKSDTIAAAFRDNRPERTRKQHEQPLPPPPSSDHIRAKSVACSA-ALTVVLGEDGRVYCMGYNRWGQCGQGPENVFTV-FKPLRVGCGNTSSSVGGRGALLEHEKITKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIG 834
            R+Q    ++ G+G+LGALGHG+       T +  LA    D+ S  AGW HSAA   D G  ++WGRP+D KQ LR + I    P +  A+  + S R VL S +   +                                       +D    + VAC A ALTV +   GRV+ +G N  GQCG G  +     + P+        +S+ G G       I     GF   L L   G+++ WG+G RGQLG+G
Sbjct:   43 RRQRVGAFSFGKGYLGALGHGNLGDAPDVTLIRELAEVGADVTSVGAGWGHSAATTSD-GAAVIWGRPYDFKQTLRTHHIHDFAPWLARALGRI-SGRVVLLSTLPTRI-------------------------------------DGADEEHFERVACGAGALTVGVTRSGRVFSVGVNFHGQCGTGATSACEFDWAPV--------ASLDGAG-------IVDARCGFAHTLALAADGQLYAWGRGHRGQLGLG 244          
BLAST of mRNA_P-littoralis_Contig688.13.1 vs. uniprot
Match: A0A418ALH5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ALH5_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 5.510e-19
Identity = 73/245 (29.80%), Postives = 107/245 (43.67%), Query Frame = 1
Query:   97 VYTHGEGFLGALGHGDFSAREVATPVDALASRDLCSASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLVPLVVTAVNALASSREVLP-SPVSVPLVAEPGEENSKSDTIAAAFRDNRPERTRKQHEQPLPPPPSSDHIRAKSVACSAALTVVLGEDGRVYCMGYNRWGQCGQGPENVFTVFKPLRVGCGNTSSSVGGRGALLEHEKITKLAVGFQQVLVLCESGRVFGWGKGLRGQLG 828
            +Y++GEG+LG LGHG++S+ E    +DA    DL  AS GW+H+  V    G+  V+GR    K  +R   + R  P  +   N +   R V   +PV V L                      PE                   +   VAC   L++   E G +Y  G N +GQCG G EN  +V++                  +++   + ++A G+Q VL L   G+V+ WGKG RGQLG
Sbjct:   16 LYSYGEGYLGTLGHGNYSSVEAPKALDAFDGLDLVQASTGWSHTGVVDAH-GKAYVFGRTHHFKNVIRAINMHRFAPWFLDFANKVGGHRSVEAFTPVEVTL----------------------PE-------------------KVVEVACGTTLSLFRTESGSLYANGGNYYGQCGVGHENA-SVWE----------------AEVVKLPPVQQVAAGYQHVLALTTEGQVYSWGKGERGQLG 201          
BLAST of mRNA_P-littoralis_Contig688.13.1 vs. uniprot
Match: B7G4H9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G4H9_PHATC)

HSP 1 Score: 94.7 bits (234), Expect = 7.800e-17
Identity = 107/396 (27.02%), Postives = 163/396 (41.16%), Query Frame = 1
Query:   82 KQSFHVYTHGEGFLGALGHGDFSAR--------EVATPVDALASRDLCSASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLVP--LVVTAVNALAS--SREVLPSPVSVPLVAEPGEENSKSDTIAAAFRDNR--PERTRKQHEQPLPPPPSSDHIRAKSVACSAALTVVLGEDGRVYCMGYNRWGQCGQG--PENVFTVFKPLRVGCGNTSSSVGG-RGALLEHEKITKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIGGEMTELPEQVDLPGNVVDLRSXXXXXXXXXXXXXXXXXXKMQGTAVKKEGRVPVYEDQLYP-------RKVD-----------IVGGGRAVEAFCSSFNTLLRMEDGRILMSGLEADTRNTVHSPKEV 1164
            +++F VY  G G+ GA G+G F           E  +P+  +    +   S GW H+A +  D   +L+ GRP D    LR+ R+   V    + +++N      SR V P  +   L+           T   A R +   PE      E  LP     D     SV+CSAALT ++ E G+VY  G N +GQCG G    +V+    PLR   G TS      RG + +   +  +A+G Q  + L E G VF WGKG RGQLG G   TE    + +      L                     +   A+ K+  V ++   + P       +KV            +  G R     C S +T + ++DG +  +G+   T+  +H   ++
Sbjct:   28 RRTFAVYAVGSGWTGAFGNGRFDQEISGHNDEEEAGSPLK-IYDGSVKDISLGWGHTAILTEDR-RLLLAGRPHDFSVLLRLRRLPLWVRNYAINSSINEFRGLDSRSVHPIALIGRLITWLAIRFKYPTTELEAARRHSIFPELA----EIALP-----DSEVPSSVSCSAALTAIVTESGKVYAFGLNGFGQCGIGMTSNHVWNPSSPLR---GLTSEFANQPRGEMEQSYPVVDVALGLQHGICLNEVGEVFCWGKGERGQLGQGLITTEAHTALPVK-RAFTLGEKMKPQYQTIGQVTQIDAGMIHCAALTKDNEVLIWGKHVLPLLPGDENKKVSSDARLPYILPGLPKGVRVERIACGSHHTAILLDDGSVYAAGIATHTKEPIHEAVQI 408          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig688.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL82_ECTSI4.160e-21474.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG88_9PHAE3.090e-20672.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1FR76_PYTOL2.150e-2729.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XTS7_9STRA1.410e-2428.41Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A484E934_BRELC3.670e-2426.80Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A196SGG2_BLAHN4.870e-2225.27Ankyrin repeat-containing protein n=1 Tax=Blastocy... [more]
A0A7S2XT67_9STRA1.990e-1932.48Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S1CCH6_9STRA4.910e-1931.25Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A418ALH5_9STRA5.510e-1929.80Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
B7G4H9_PHATC7.800e-1727.02Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig688contigP-littoralis_Contig688:27222..31314 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LL82
PFAMsRCC1,RCC1_2
Model size1875
Max annot lvl2759|Eukaryota
KEGG koko:K19607
Hectar predicted targeting categorymitochondrion
Exons3
Evalue8.69e-218
EggNOG OGsCOG5184@1|root,KOG1426@2759|Eukaryota
Ec32 ortholog descriptionRegulator of chromosome condensation, RCC1
Ec32 orthologEc-24_002600.1
Descriptionguanyl-nucleotide exchange factor activity
Cds size1419
COG categoryDZ
BRITEko00000,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791426.0231752-UTR-P-littoralis_Contig688:27221..276771680791426.0231752-UTR-P-littoralis_Contig688:27221..27677Pylaiella littoralis U1_48UTRP-littoralis_Contig688 27222..27677 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791426.0365086-CDS-P-littoralis_Contig688:27677..279351680791426.0365086-CDS-P-littoralis_Contig688:27677..27935Pylaiella littoralis U1_48CDSP-littoralis_Contig688 27678..27935 -
1680791426.047273-CDS-P-littoralis_Contig688:29549..298481680791426.047273-CDS-P-littoralis_Contig688:29549..29848Pylaiella littoralis U1_48CDSP-littoralis_Contig688 29550..29848 -
1680791426.058451-CDS-P-littoralis_Contig688:30452..313141680791426.058451-CDS-P-littoralis_Contig688:30452..31314Pylaiella littoralis U1_48CDSP-littoralis_Contig688 30453..31314 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig688.13.1prot_P-littoralis_Contig688.13.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig688 27678..31314 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig688.13.1

>prot_P-littoralis_Contig688.13.1 ID=prot_P-littoralis_Contig688.13.1|Name=mRNA_P-littoralis_Contig688.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=473bp
MRRALQATRCCSLRPPQPQHHHHHQSRKQSFHVYTHGEGFLGALGHGDFS
AREVATPVDALASRDLCSASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLR
INRIQRLVPLVVTAVNALASSREVLPSPVSVPLVAEPGEENSKSDTIAAA
FRDNRPERTRKQHEQPLPPPPSSDHIRAKSVACSAALTVVLGEDGRVYCM
GYNRWGQCGQGPENVFTVFKPLRVGCGNTSSSVGGRGALLEHEKITKLAV
GFQQVLVLCESGRVFGWGKGLRGQLGIGGEMTELPEQVDLPGNVVDLRSG
FSHAVAILENGDVYTWGKMQGTAVKKEGRVPVYEDQLYPRKVDIVGGGRA
VEAFCSSFNTLLRMEDGRILMSGLEADTRNTVHSPKEVDIPASDPGSFFS
GFNDTIVRTRRTLRKETTTVFPPDNGVDVPDFHRVSFTSTGASVSPFYLP
GLTGRRVDSVCVGWQHTVALVH*
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mRNA from alignment at P-littoralis_Contig688:27222..31314-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig688.13.1 ID=mRNA_P-littoralis_Contig688.13.1|Name=mRNA_P-littoralis_Contig688.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4093bp|location=Sequence derived from alignment at P-littoralis_Contig688:27222..31314- (Pylaiella littoralis U1_48)
ATGCGGCGAGCCCTGCAAGCCACACGTTGCTGCTCACTCCGCCCCCCTCA ACCACAACACCACCACCACCACCAGTCACGGAAGCAATCGTTCCACGTCT ATACCCACGGTGAAGGCTTCCTGGGCGCGCTGGGCCATGGCGACTTCTCC GCGCGAGAAGTGGCAACGCCCGTGGATGCCCTCGCCTCCAGAGACTTGTG TTCCGCCAGCGCCGGTTGGACTCACTCTGCCGCGGTGTGCCGAGACACGG GAGAGGTGCTTGTCTGGGGCCGACCCTTCGACCTGAAGCAACCCTTGCGA ATAAACCGTATCCAGCGCCTGGTTCCCCTCGTCGTTACCGCGGTCAACGC TCTCGCGAGCTCGAGAGAGGTCCTGCCGAGCCCGGTGTCCGTGCCCCTGG TAGCGGAGCCGGGCGAGGAGAATTCGAAGTCCGACACCATCGCGGCGGCC TTCCGCGACAACCGGCCTGAAAGAACACGAAAGCAGCACGAACAACCGCT GCCACCACCACCATCTTCCGATCACATCAGGGCCAAGAGCGTCGCCTGCT CGGCTGCTCTGACCGTGGTTCTAGGGGAGGATGGCAGGGTCTACTGCATG GGCTACAATCGTTGGGGGCAGTGTGGCCAGGGACCCGAGAACGTCTTCAC CGTGTTCAAGCCTCTTCGCGTGGGCTGCGGCAACACCAGCAGCAGCGTTG GCGGCAGAGGCGCCCTCCTGGAGCACGAGAAGATCACCAAGCTCGCCGTC GGGTTCCAGCAGGTGCTCGTCCTCTGCGAGAGCGGTAGAGTATTCGGCTG GGGCAAGGGGTTGCGGGGACAGCTGGGCATCGGCGGAGAAATGACCGAGC TTCCCGAGCAAGGTAAGCCTCGCGCCTTCAAGTGTGCAGTAGACGAATCA AAAGCCGCACACGCATGCAGAGCATGATTTCGCATGGTCTTCTTTTTTGT GTCCTTGCTTTTGCACGCGCCCTTGTGCTTGTCGGCTGCGCGTGACTCCC ATATTTTGTGCTGTCAACTGTCCGTGTACGCTGCTGTTCGGGTGTACGCC ACCTATTTCTGTATGCGTCGGTTGTTTGAAGAATTACGTTCAGCAGCTGG ACACGGCTCTGCTCTAGATTTTTTTACTTTTTTTACTCGTTTTCCCTGGA CTTCAGCGCACAACCGGTACCACATCTCTGTGACGAAGTTGGCGCTCGTG AGACTCAACACGAGCACGTGCATCTTGCCGATCTTCTGGCCCTATTGTTG TTTCCTGCTGTTGCTTCTACACCGCTCTACGTGTGGCCTCCCATTCCCCC TCCAAGTCACCCCACGCGAATTCGTCTTTCAATCCACCACTTCAGAGTAC AAGGGAGACGCGGGCTGCGCTTGATTCATGGTCGGTGGACATGCGCTAAA AACGTTCCCTCCCTCCGCTCGCACCTGTTTCATGTGTTTTTTTTCTTTTT ATCAACTTCAAATCAGTCGATCTGCCTGGCAATGTGGTCGACCTCCGGAG CGGTTTCAGTCACGCCGTCGCCATCCTCGAGAATGGTGACGTGTACACTT GGGGCAAGATGCAGGGCACGGCAGTCAAGAAAGAAGGCAGAGTTCCCGTG TACGAGGACCAGCTGTATCCCCGAAAGGTTGACATCGTCGGCGGAGGTCG AGCCGTGGAAGCGTTCTGCTCCTCGTTCAACACGCTGCTGAGGATGGAAG ACGGGAGGATCCTCATGTCCGGTCTTGAAGCAGACACTCGAAATACGGTG CACAGCCCGAAAGAGGTAAGGGAAAACTGGCGCGCGCGGTGACAGGACGA CGTCAATTCGGTAGCCGCCGTCTAAAATAAACGCGTTTCCAAGTCCAAAG TTTTTGACTTAACCGCCATCCCATTTGTTGTCTGTGCGTTGGAGTGCGCC TTTTATAAGTCATCAGTTTGGCAAACCTGGCCGAGTTCACACTGGAGGAA GGATGGTGAAAAAAAATCTCGCCTCCCCTTGGGGTGCTTGGCCTAAATTA ACTAGAACTCTTTCCCCGAGAAGGACTCGATTGTCGCCTTTCTTTTGTCA TTTTTTTCTCCAAACGGGTCTTTCTTTGTACCTCCTAAAAGTTGAAAAAA AAATTGGTGCCGAAGTTCGAACTCAAGGCCCGTCCCATAGTAAGTTGAGG TTGCGAGGGTACCCTGACCCACTCCGGCGACCTACCTCAAAAGCAGGACA GGGAAAGAATCGGCGTGCGTTTTAGTTGTTCACGATGTTTTGCGTTCTCG TGTACTACGAAGAACAGACGACCTGGAAAAGGTAGTGTCCCGTTGCATTT CGTTTGTGTCTTGGTACCTTTCAATTTTAACACTTGACATTTTAAGGATT CGATTGTGATGAATTAAGTGTGGTACACACGTGTACACTGCTGGGAAGAC ACACCTTTTCCCGCGAGAAGCATGCAGGCGAACAAAGGTGTGCACAGCTA ACAAAGAGCTGGGATGCGAACGCGTGGTTTACACAGGCCGCGGCATCGCT CCCTCGCCTTCAAGCGCGCTCAGAGGGTCTTTTCATTTTCTTAATGACAC GCATCTTTGATTCTCCAACCCGCCCGTCATTCTTATGACGGGTCGAGAGG TGTATTGAACTACGCGGGCCGATTTTGATTTGAAGTGTTCAATCACACCC CTCGTTCCATGAGGCACAAGCGCGGCGAAAGGCTCGAGATAAAACCACAG ATTTGCGCGCGTCGAGATCGCTGTCGGGTACGTCCTGACGCTTCTCCGCA TTGCACTGGCTCTATATTCCCATCCTTGGGCGATGCTGTCTTTTCCCTAA ACGTTTCCTTTCTCTCTTTTTGCCGCCTTCGGGAGGATTTGATTGGGAGG ATGCGGGCGGGGGGGGGCAGTGATTACGTGTCGGGGAATAACCATAGAGC ACACATTTCATAATTTCCTTCATCTTGCCTCATTTTGGTGGTTTCAAAGT CGGATGCAGGGTATTTCTTTCAGCGGATTGTTTCTCGGACGTGCTCTCTC CACGTCGTTGCCATATACCAGGTATTTTGTCTCTTCAGCATGCCTGACTG TTGGCGGCGATTTGTTCTTGCTGTGCTGGAAAAGAAAACATGGAAAAGCA TTAACAAGCACTTTAACGGCGTTCTTTGACTTGGACCTTTTCGCGCCATC AAAGTGACATTTATATGGGGTGTGGATCACGTCTTTTGTGTGTAATTTTC TCCAAGCACGCCGTCATTTTTCTCTCCCGCTTCCAAAACTGACTATATGT TTCTTTACTTGAGTCGACACATCGGCCAAATATCGGCATATCGGCTGCGC CGACTTGTCATCATGTAGTTTTCCTACGAGACCACTTTCCTCCACGCTGC CGCTCTCAAATTGAATCGATGCGGAACAGGTCGACATCCCAGCGTCGGAT CCCGGATCGTTTTTCAGCGGTTTCAACGACACGATCGTCAGGACCAGAAG GACCCTTCGGAAGGAAACCACCACGGTTTTCCCCCCGGATAACGGCGTCG ACGTCCCGGACTTTCATCGAGTTTCGTTCACAAGCACTGGTGCTAGCGTT TCCCCTTTTTATTTACCGGGCTTGACCGGCAGACGCGTGGATTCTGTTTG TGTGGGATGGCAGCACACCGTTGCCTTGGTGCATTAAAATGTCTCGGAAG ATATGTAGATAAAACAGCTTGCGTGGCTCGCACGTTTCTTTTAAGCCGTT GTGATTAGCTATCTGCGAAGATTGCGCTACAAGGAAAACAGGGCATGAAT GTCTCCGCGACGTAACGTTAGTCGAGATTATTTAAGGTAGTTTTGAGTAA ATGTTTCGTGTTCGCTGTACGCGATAACGATGTCTGTTGCGAGAATCGCG CGAACATCAAGCGAGAGAACGAAAACATATGGGGGCAAGCGTTGATAACT TTAAAGCACAATTCACCCAAAATAAGTCTCCCCGTGTCTTCAAGAGGGAA AAGATTTCGAATCTCCGACGAAAGTCATTAGAGCAAGGAATACCCCCTGA CTTTTCATGGGCGCTCCCGGTAACGACCTTTGTCGTGACAATTTACCGTG GTAGTGACGTTTAATCCACATTTTTTTCTTGGGCAAGTTCTAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig688:27222..31314-

>mRNA_P-littoralis_Contig688.13.1 ID=mRNA_P-littoralis_Contig688.13.1|Name=mRNA_P-littoralis_Contig688.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1419bp|location=Sequence derived from alignment at P-littoralis_Contig688:27222..31314- (Pylaiella littoralis U1_48)
ATGCGGCGAGCCCTGCAAGCCACACGTTGCTGCTCACTCCGCCCCCCTCA
ACCACAACACCACCACCACCACCAGTCACGGAAGCAATCGTTCCACGTCT
ATACCCACGGTGAAGGCTTCCTGGGCGCGCTGGGCCATGGCGACTTCTCC
GCGCGAGAAGTGGCAACGCCCGTGGATGCCCTCGCCTCCAGAGACTTGTG
TTCCGCCAGCGCCGGTTGGACTCACTCTGCCGCGGTGTGCCGAGACACGG
GAGAGGTGCTTGTCTGGGGCCGACCCTTCGACCTGAAGCAACCCTTGCGA
ATAAACCGTATCCAGCGCCTGGTTCCCCTCGTCGTTACCGCGGTCAACGC
TCTCGCGAGCTCGAGAGAGGTCCTGCCGAGCCCGGTGTCCGTGCCCCTGG
TAGCGGAGCCGGGCGAGGAGAATTCGAAGTCCGACACCATCGCGGCGGCC
TTCCGCGACAACCGGCCTGAAAGAACACGAAAGCAGCACGAACAACCGCT
GCCACCACCACCATCTTCCGATCACATCAGGGCCAAGAGCGTCGCCTGCT
CGGCTGCTCTGACCGTGGTTCTAGGGGAGGATGGCAGGGTCTACTGCATG
GGCTACAATCGTTGGGGGCAGTGTGGCCAGGGACCCGAGAACGTCTTCAC
CGTGTTCAAGCCTCTTCGCGTGGGCTGCGGCAACACCAGCAGCAGCGTTG
GCGGCAGAGGCGCCCTCCTGGAGCACGAGAAGATCACCAAGCTCGCCGTC
GGGTTCCAGCAGGTGCTCGTCCTCTGCGAGAGCGGTAGAGTATTCGGCTG
GGGCAAGGGGTTGCGGGGACAGCTGGGCATCGGCGGAGAAATGACCGAGC
TTCCCGAGCAAGTCGATCTGCCTGGCAATGTGGTCGACCTCCGGAGCGGT
TTCAGTCACGCCGTCGCCATCCTCGAGAATGGTGACGTGTACACTTGGGG
CAAGATGCAGGGCACGGCAGTCAAGAAAGAAGGCAGAGTTCCCGTGTACG
AGGACCAGCTGTATCCCCGAAAGGTTGACATCGTCGGCGGAGGTCGAGCC
GTGGAAGCGTTCTGCTCCTCGTTCAACACGCTGCTGAGGATGGAAGACGG
GAGGATCCTCATGTCCGGTCTTGAAGCAGACACTCGAAATACGGTGCACA
GCCCGAAAGAGGTCGACATCCCAGCGTCGGATCCCGGATCGTTTTTCAGC
GGTTTCAACGACACGATCGTCAGGACCAGAAGGACCCTTCGGAAGGAAAC
CACCACGGTTTTCCCCCCGGATAACGGCGTCGACGTCCCGGACTTTCATC
GAGTTTCGTTCACAAGCACTGGTGCTAGCGTTTCCCCTTTTTATTTACCG
GGCTTGACCGGCAGACGCGTGGATTCTGTTTGTGTGGGATGGCAGCACAC
CGTTGCCTTGGTGCATTAA
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