mRNA_P-littoralis_Contig688.3.8 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig688.3.8
Unique NamemRNA_P-littoralis_Contig688.3.8
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig688.3.8 vs. uniprot
Match: A0A6H5JKS8_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKS8_9PHAE)

HSP 1 Score: 566 bits (1458), Expect = 5.350e-194
Identity = 317/457 (69.37%), Postives = 339/457 (74.18%), Query Frame = 3
Query:  273 TKPPEGAKSPAGGVYGGTLTETATAAADVSVMRVNQLDAGVLDTELQGLLKTQLGRVCSRLPAGTLERFQPEVDALFNLLMFRFTIWVHRPTPGMHLQGLRYRNESGR-AMPPAGGRDGASXXXXXXXXXXXXXXXXXXXXXXXXXXXSGISALALGWEGGGAEAVGXXXXXXXXXXXXXXXXXXXXXXXXXXLGTSXXXXPSPSPLAVPLPFWGDAAPTRTQRLAHGLLSVGVQWGFARLRRHGLVHGWGGAEAGSARRVAWHVLGRLETMFRVVWMVNLLLFLKSGKYASPVDRLVQMRMVHDRADPGPRSINYQFLNRRLLWDHWAKMAYVVAPLINWGSVRRAVSGGAGRLRREARALGIFGGXXXXXXXXXSMLVGRGASARAGVEGTAAASAAVLTACAECGANPAKTPYLTECGHVFCYYCARVACTVDPRYACPRCGEYFATSRRWSQP 1640
            TK P G +SPAG VYG TL E A    ++SVMRVNQLDAGVLDTEL  LLKTQLGR CS LPAGTLERF+PEVDALFNLLMFRFT+WVHRPTPGMHLQGLRYR+E GR A PP+    G SXXXXXXXXX                    +S+LA GWEGG   A+G                            +S    P  +  A PLP+WGDAAPTR QRL HGLLSVGVQWGFARLRRHGL+HGWGG +AG ARRVAWHVLGRLET+FR+ WMVNLLLFLKSGKYA+PVDRLV+MRMVHDRADPGPR INYQFLNRRLLWDHWAKMAYVVAPLINWG VRRAVSGGAGRLRREARA GIFGG         +    RG  A       AA +  VLTACAECGANPAKTPY+T CGHVFCYYCARVACTVDPRYACPRCGEYFATSRRWSQP
Sbjct:    9 TKTP-GGRSPAG-VYG-TLGEPA----ELSVMRVNQLDAGVLDTELHSLLKTQLGRACSGLPAGTLERFKPEVDALFNLLMFRFTVWVHRPTPGMHLQGLRYRSEGGRTAGPPSATASGGSXXXXXXXXXAGD-----------------VSSLASGWEGGDGGALGHGGPSNTADGSSVGTRSPEREGG----ASSTSTFPGLASTA-PLPYWGDAAPTRAQRLVHGLLSVGVQWGFARLRRHGLIHGWGGEDAGRARRVAWHVLGRLETLFRLAWMVNLLLFLKSGKYATPVDRLVRMRMVHDRADPGPRPINYQFLNRRLLWDHWAKMAYVVAPLINWGFVRRAVSGGAGRLRREARAFGIFGGSSGGAGRVSA----RGLGADTAPAAEAAVAEVVLTACAECGANPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFATSRRWSQP 432          
BLAST of mRNA_P-littoralis_Contig688.3.8 vs. uniprot
Match: W7TYI4_9STRA (Peroxin-2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYI4_9STRA)

HSP 1 Score: 213 bits (541), Expect = 7.390e-58
Identity = 160/483 (33.13%), Postives = 219/483 (45.34%), Query Frame = 3
Query:  285 EGAKSPAGGVYGGTLTETATAAADVSVMRVNQLDAGVLDTELQGLLKTQLGRVCSRLPA-----GTLERFQPEVDALFNLLMFRFTIWVHRPTPGMHLQGLRYRNESGRAMPPAGGRDGASXXXXXXXXXXXXXXXXXXXXXXXXXXXSGISALALGWEGGGAEAVGXXXXXXXXXXXXXXXXXXXXXXXXXXLGTSXXXXPSPSPLAVPLPFWGDA-APTRTQRLAHGLLSVGVQWGFARLRRHGLVHGW---------------------------GGAEAGSARRVAWHVLGRLETMFRVVWMVNLLLFLKSGKYASPVDRLVQMRMVHDRADPGP-RSINYQFLNRRLLWDHWAKMAYVVAPLINWGSVRRAVSGGAGRLRREARALGIFGGXXXXXXXXXSMLVGRGASARAGVEGTAAASAAVLTACAECGANPAKTPYLTECGHVFCYYCARVACTVDPRYACPRCGEYFATSRRW 1631
            E A+   GG +G    +TA++     VM+VNQ+DA VLDTEL  LL+ QL   CS         G +++++PE+ AL + L+FRFTI+ + PTPGM +Q LR+ +  G A+                                                                                   GTS     S            DA AP  +QRL  G L +  QWGFARLRRH LV GW                           G    G  +R A+  L R E++FR+ W++N L+FL+ G Y S + RLV MR+V+  +  G  R+IN+QF+NR+LLW+H+ ++A  V PL++W  +RR VSG    L R+ RA G +                 GA    G E   A  A     C  CG   A+TPY+T+CGH++CYYC + AC  D  ++CPRCG +FATSRRW
Sbjct:   74 ESARGKPGGGWG---LDTASS----GVMKVNQVDARVLDTELLDLLQIQL---CSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVD--GHAI-----------------------------------------------------------------------------------GTSVSSAASSV----------DAHAPRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSG----LIRQRRA-GAWAA---------------GAGXXGGSEFRGAGGADGDMECVVCGEESAQTPYVTDCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRRW 431          
BLAST of mRNA_P-littoralis_Contig688.3.8 vs. uniprot
Match: D8RZT6_SELML (Uncharacterized protein TED3-2 n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RZT6_SELML)

HSP 1 Score: 144 bits (363), Expect = 3.720e-34
Identity = 109/426 (25.59%), Postives = 177/426 (41.55%), Query Frame = 3
Query:  357 VSVMRVNQLDAGVLDTELQGLLKTQLGRVCSRLPAGTLERFQPEVDALFNLLMFRFTIWVHRPTPGMHLQGLRYRNESGRAMPPAGGRDGASXXXXXXXXXXXXXXXXXXXXXXXXXXXSGISALALGWEGGGAEAVGXXXXXXXXXXXXXXXXXXXXXXXXXXLGTSXXXXPSPSPLAVPLPFWGDAAPTRTQRLAHGLLSVGVQWGFARLRRHGLVHGWGGAEAGSARRVAWHVLGRLETMFRVVWMVNLLLFLKSGKYASPVDRLVQMRMVHDRADPGPRSINYQFLNRRLLWDHWAKMAYVVAPLINWGSVRRAVSGGAGRLRREARALGIFGGXXXXXXXXXSMLVGRGASARAGVEGTAAASAAVLTACAECGANPAKTPYLT-ECGHVFCYYCARVACTVDPRYACPRCGEYFATSRRW 1631
            V++ RVNQ DA  LD E+ G+L+ QL ++ S +  G L R++PE++A    L++RF+IWV RPTPG  L  LRYR+E      PA                                     S +  G EG G  A+                                                        Q++ + L  VG ++G+ARL+       WG  ++ S  R  W +L R E+ ++V +M+NL+ FL++G+Y + V+RL+Q R+V+ R +   R+++++++N +L+W  ++++  +V PL+N  S+++ +                            S L G+    R   E            C  C  +P   PY+   CGH  CYYC    C  +  Y C RC       +R+
Sbjct:   41 VAISRVNQFDAERLDFEMTGMLRGQLLKIFSFVQPGLLSRYEPELNAFLEFLIWRFSIWVDRPTPGNALMNLRYRDEREFLKLPA-------------------------------------SQVRTGLEGPGLTAL--------------------------------------------------------QKIFYCLALVGGRYGWARLQLVSAFQRWGDRDSRSWPRRVWVLLQRAESFYKVAYMINLIAFLRTGRYRNLVERLLQTRLVYLRPNMS-RAVSFEYMNHQLVWQEFSELLLLVLPLLNVFSLKKVLP---------------------------SSLTGKETVKRTDEE-----------TCPICEVSPINVPYMAVPCGHRHCYYCLSTRCIANSTYRCARCNSNVTAMQRY 334          
BLAST of mRNA_P-littoralis_Contig688.3.8 vs. uniprot
Match: L8HGF4_ACACA (Pex2 / Pex12 amino terminal regioncontaining protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGF4_ACACA)

HSP 1 Score: 143 bits (360), Expect = 6.300e-34
Identity = 107/413 (25.91%), Postives = 161/413 (38.98%), Query Frame = 3
Query:  363 VMRVNQLDAGVLDTELQGLLKTQLGRVCSRLPAGTLERFQPEVDALFNLLMFRFTIWVHRPTPGMHLQGLRYRNESGRAMPPAGGRDGASXXXXXXXXXXXXXXXXXXXXXXXXXXXSGISALALGWEGGGAEAVGXXXXXXXXXXXXXXXXXXXXXXXXXXLGTSXXXXPSPSPLAVPLPFWGDAAPTRTQRLAHGLLSVGVQWGFARLRRHGLVHGWGGAEAGSARRVAWHVLGRLETMFRVVWMVNLLLFLKSGKYASPVDRLVQMRMVHDRADPGPRSINYQFLNRRLLWDHWAKMAYVVAPLINWGSVRRAVSGGAGRLRREARALGIFGGXXXXXXXXXSMLVGRGASARAGVEGTAAASAAVLTACAECGANPAKTPYLTECGHVFCYYCARVACTVDPRYACPRC 1601
            V+RVNQLDA +LD EL  ++KT   ++ S      ++RF PE+DA    +M+R +++    T G  LQ L YR+E                                                                                       L  +    P                P+  Q++  G+L +G  W +ARL R      W   +     +  W VL  LE  ++ + ++N + FL +GKY SPVDRL+ MR+V+ R     R +N++F+NR+L+W  +++    + PLIN   ++R +     RL +    L                      S   G  G           C  C A+PA +PYL++CGH+FCYYC + A  VD  YACP C
Sbjct:   37 VLRVNQLDASLLDNELTSIIKTSFTKIFSLFRPSLIDRFTPELDAFLYFIMYRLSLYATGSTYGQRLQNLTYRDER-----------------------------------------------------------------------------------QDYLQATQRIIP----------------PSTLQKIMWGVLHIGGAWAWARLNRLASDRTWAERDEDDVYKTLWKVLNYLEVAWKALTLLNFVAFLYNGKYMSPVDRLLGMRLVYARPSVA-RFVNFEFMNRQLVWHGFSEFLMFLTPLINADRIKRTIY----RLFKFRNKL----------------------SPSLGNAG-----------CGVCQADPAHSPYLSDCGHLFCYYCIKTAMMVDRSYACPSC 312          
BLAST of mRNA_P-littoralis_Contig688.3.8 vs. uniprot
Match: A0A4D9D9T6_9STRA (Pex2_Pex12 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9T6_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.850e-33
Identity = 122/395 (30.89%), Postives = 171/395 (43.29%), Query Frame = 3
Query:  285 EGAKSPAGGVYGGTLTETATAAADVSVMRVNQLDAGVLDTELQGLLKTQLGRVCSRLPA-----GTLERFQPEVDALFNLLMFRFTIWVHRPTPGMHLQGLRYRNESGRAMPPAGGRDGASXXXXXXXXXXXXXXXXXXXXXXXXXXXSGISALALGWEGGGAEAVGXXXXXXXXXXXXXXXXXXXXXXXXXXLGTSXXXXPSPSPLAVPLPFWGDA-APTRTQRLAHGLLSVGVQWGFARLRRHGLVHGW--------------------------------GGAEAGSARRVAWHVLGRLETMFRVVWMVNLLLFLKSGKYASPVDRLVQMRMVHDRADPGP-RSINYQFLNRRLLWDHWAKMAYVVAPLINWGSVRRAVSGGAGRLRREARA 1352
            E A+   GG +G    +TA++     VM+VNQ+DA VLDTEL  LL+ QL   CS         G +++++PE+ AL + L+FRFTI+ + PTPGM +Q LR+ +  G A+                                                                                   GTS     S            DA AP  +QRL  G L +  QW FARLRRH LV GW                                G    G  +R A+  L R E++FR+ W++N L+FL+ G Y S + RLV MR+V+  +  G  R+IN+QF+NR+LLW+H+ ++A  V PL++W  +RR VSG    L R+ RA
Sbjct:   74 ESARGKPGGGWG---LDTASS----GVMKVNQVDARVLDTELLDLLQIQL---CSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVD--GHAI-----------------------------------------------------------------------------------GTSVSSVASSV----------DAHAPRVSQRLLLGFLCIAGQWSFARLRRHALVAGWADEVQHPQSLIPHTSDAQASNGDDRGQGERSSGTQGGGQWKRRAYRALTRAESLFRLAWLLNFLVFLRVGSYPSLLQRLVGMRLVYGPSSGGAARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSG----LIRQRRA 359          
BLAST of mRNA_P-littoralis_Contig688.3.8 vs. uniprot
Match: A0A7S0SPP6_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SPP6_9CHLO)

HSP 1 Score: 137 bits (345), Expect = 1.490e-31
Identity = 123/427 (28.81%), Postives = 185/427 (43.33%), Query Frame = 3
Query:  348 AADVSVMRVNQLDAGVLDTELQGLLKTQLGRVCSRLPAGTLERFQPEVDALFNLLMFRFTIWVHRPTPGMHLQGLRYRNES-GRAMPPAGGRDGASXXXXXXXXXXXXXXXXXXXXXXXXXXXSGISALALGWEGGGAEAVGXXXXXXXXXXXXXXXXXXXXXXXXXXLGTSXXXXPSPSPLAVPLPFWGDAAPTRTQRLAHGLLSVGVQWGFARLRRHGLVHGWGGAEAGSARRVAWHVLGRLETMFRVVWMVNLLLFLKSGKYASPVDRLVQMRMVHDRADPGPRSINYQFLNRRLLWDHWAKMAYVVAPLINWGSVRRAVSGGAGRLRREARALGIFGGXXXXXXXXXSMLVGRGA--SARAGVEGTAAASAAVLTA---CAECGANPAKTPYLTE-CGHVFCYYCARVACTVDPRYACPRCGE 1607
            A DV +++V+Q+DAG LD EL  LL+ Q  RV SRL  G +   QPE+  + +LL+F FT+W  R TPGM L  LRYR+E   R++                                      G  AL  G EG                                              L+V            TQRL +G + VG ++ +++L R   +  W      S R  AW  +G +E  +    ++NL++FL+ G+Y S ++RL++ R+V+  A+   R I++++LNR+L+W   ++ A  + PL++   ++  VS     L    R       XXXXXXXXX       A  +   GV G  A+          C  C + P  TPY  + CGH +CY+C R  C +D +  C  C +
Sbjct:   35 APDVRILKVSQIDAGRLDGELTSLLREQFMRVFSRLHPGAVAHLQPELTFVLDLLVFYFTVWSCRSTPGMELMNLRYRDERRARSL--------------------------------------GRGALKTGMEG--------------------------------------------QNLSV------------TQRLLYGAIYVGGRFVWSKLTRRANISQWADENEQSLRYRAWRSIGVVENAYSAASLLNLMVFLRHGRYRSLLERLLRARLVYKEANMS-RVISFEYLNRQLVWQELSEFALFLLPLVSAPRIQALVSQMFSSLPSSTRGTSXXXXXXXXXXXXXXXXXXXDAREACTGGVSGXXASGDTAPRCDLPCVACQSLPPTTPYSAQPCGHTYCYFCIRARCKMDAQLKCLACNQ 366          
BLAST of mRNA_P-littoralis_Contig688.3.8 vs. uniprot
Match: A0A1Y1HJW7_KLENI (Peroxin-2 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HJW7_KLENI)

HSP 1 Score: 130 bits (327), Expect = 1.900e-29
Identity = 101/416 (24.28%), Postives = 168/416 (40.38%), Query Frame = 3
Query:  357 VSVMRVNQLDAGVLDTELQGLLKTQLGRVCSRLPAGTLERFQPEVDALFNLLMFRFTIWVHRPTPGMHLQGLRYRNESGRAMPPAGGRDGASXXXXXXXXXXXXXXXXXXXXXXXXXXXSGISALALGWEGGGAEAVGXXXXXXXXXXXXXXXXXXXXXXXXXXLGTSXXXXPSPSPLAVPLPFWGDAAPTRTQRLAHGLLSVGVQWGFARLRRHGLVHGWGGAEAGSARRVAWHVLGRLETMFRVVWMVNLLLFLKSGKYASPVDRLVQMRMVHDRADPGPRSINYQFLNRRLLWDHWAKMAYVVAPLINWGSVRRAVSGGAGRLRREARALGIFGGXXXXXXXXXSMLVGRGASARAGVEGTAAASAAVLTACAECGANPAKTPYLT-ECGHVFCYYCARVACTVDPRYACPRC 1601
            + V+RVNQ+DA  LD E+ G+L+ QL +V S L  G L R++PE++ +   L+FRF+IWV RPTPG  L  LRYRNE                                            +  +  G EG G                                                         TR+Q++ +    +G ++ + RL     +  WG  +  +     W +L  +E  +R++  +NLL FL++GKY +PV+ ++  R+V+DR     R ++++++NR+L+W  ++++  ++ PL++  S++                               S L+    S+     G  +A++    +CA C  +    PY    C H+FCYYC          Y CPRC
Sbjct:   39 LQVLRVNQVDAQRLDVEMTGMLREQLVKVFSFLRPGILSRYEPELNLVLEALVFRFSIWVDRPTPGNALMNLRYRNEHA-------------------------------------VRRGEVGPVRTGLEGPGL--------------------------------------------------------TRSQKVLYAAALIGGRYAWLRLNSTSALQRWGDRDRTTWANRGWRLLLWVEKSYRLLAFLNLLHFLRTGKYRNPVEAVLGTRLVYDRPTMS-RQVSFEYMNRQLVWHEFSELLLLLLPLLSLSSIK-------------------------------STLLAPFQSS-----GQNSATSLPQESCAICRTSTIAVPYTAVPCNHMFCYYCLSTHAAAQANYKCPRC 324          
BLAST of mRNA_P-littoralis_Contig688.3.8 vs. uniprot
Match: UPI00064503DB (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064503DB)

HSP 1 Score: 123 bits (309), Expect = 5.990e-27
Identity = 70/242 (28.93%), Postives = 123/242 (50.83%), Query Frame = 3
Query:  927 TRTQRLAHGLLSVGVQWGFARLRRHGLVHGWGGAEAGSARRVAWHVLGRLETMFRVVWMVNLLLFLKSGKYASPVDRLVQMRMVHDRADPG-PRSINYQFLNRRLLWDHWAKMAYVVAPLINWGSV-----RRAVSGGAGRLRREARALGIFGGXXXXXXXXXSMLVGRGASARAGVEGTAAASAAVLTACAECGANPAKTPYLTECGHVFCYYCARVACTVDPRYACPRCGEYFATSRRWS 1634
            T  Q+   GL+++G +W +AR+ R      WG     S ++  W +L  LET+++++ ++N L FL  GKY + V+R++ MR+V+  A P   R I+++++NR+L+W  + +    + PLIN   +     R  +   +   +++ R+                    +G  A    +  A     VL  C  C  +P   PY+T+CGH+FCYYC +  C +DP + CPRC    +  +R++
Sbjct:  119 TLQQKWLSGLVNIGGEWAWARINRKAANEAWGDLPDDSLKKRVWRILNHLETVYKLLSILNFLAFLFDGKYVTLVNRILCMRLVY--AQPSLSRRISFEYMNRQLVWHGFTEFFLFIMPLINIDRIKGFIYRTFIQKPSNMFQQQNRSQ-------------------QGEDAALAPQLLAPL---VLEKCPICFNDPISVPYITDCGHLFCYYCIKTNCMIDPTFTCPRCNSIVSNMKRFT 336          
BLAST of mRNA_P-littoralis_Contig688.3.8 vs. uniprot
Match: A0A1W0A7A5_9STRA (Peroxin-2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7A5_9STRA)

HSP 1 Score: 122 bits (306), Expect = 7.080e-27
Identity = 78/227 (34.36%), Postives = 113/227 (49.78%), Query Frame = 3
Query:  957 LSVGVQWGFARLRRHGLVHGWGGAEAGSARRVAWHVLG---RLETMFRVVWMVNLLLFLKSGKYASPVDRLVQMRMVHDRADPGPRSINYQFLNRRLLWDHWAKMAYVVAPLINWGSVRRAVSGGAGRLRREARALGIFGGXXXXXXXXXSMLVGRGASARAGVEGTAAASAAVLTACAECGANPAKTPYLTECGHVFCYYCARVACTVDPRYACPRCGEYFATSRR 1628
            LSVG+ + + R+ R  L + W    +  A     H L    R+ T+  +V +VN L F K G+Y S  +RLV M++   +    PR+I ++++NR+L+WD + +  Y V PLINW           GRL ++                    LV    +     EG    + + LTACA C   PAKTPY+T CGH +CY+C + A  +DP Y C  CGE F +S R
Sbjct:  118 LSVGIPYAWQRIHRALLSYRWREDRSTQAEAKYQHFLTMIHRVSTVAALVKLVNHLAFWKQGQYRSLPERLVGMKLTPLKHTVIPRTITFEYMNRQLVWDGFVEFCYFVLPLINWQRF--------GRLLKQTT----------------KQLVATDTN-----EGN---NDSQLTACALCSVTPAKTPYITSCGHQYCYFCLQTAVAMDPNYTCAMCGEVFESSER 312          
BLAST of mRNA_P-littoralis_Contig688.3.8 vs. uniprot
Match: A0A835K6R7_9ROSI (Peroxin-2 n=1 Tax=Salix dunnii TaxID=1413687 RepID=A0A835K6R7_9ROSI)

HSP 1 Score: 119 bits (299), Expect = 9.290e-26
Identity = 86/321 (26.79%), Postives = 148/321 (46.11%), Query Frame = 3
Query:  357 VSVMRVNQLDAGVLDTELQGLLKTQLGRVCSRLPAGTLERFQPEVDALFNLLMFRFTIWVHRPTPGMHLQGLRYRNESGRAMPPAG-GRDGASXXXXXXXXXXXXXXXXXXXXXXXXXXXSGISALALGWEGGGAEAVGXXXXXXXXXXXXXXXXXXXXXXXXXXLGTSXXXXPSPSPLAVPLPFWGDAAPTRTQRLAHGLLSVGVQWGFARLRRHGLVHGWGGAEAGSARRVAWHVLGRLETMFRVVWMVNLLLFLKSGKYASPVDRLVQMRMVHDRADPGPRSINYQFLNRRLLWDHWAKMAYVVAPLINWGSVRRAVS 1316
            +S+ RVNQ DA  LD E+  +LK QL +V S +  G L +++PE+DA    L++RF+IWV +PTPG  L  LRYR+E  RAM   G GR                                       G EG G                                                         T  Q++ + + +VG Q+ +ARL+       WG +E     R AW ++ R+E +++V    NLL+FL +G++ + ++R+++ R+V+   +   R+++++++NR+L+W+ +++M  ++ PL+N  SV++ +S
Sbjct:    4 ISISRVNQFDAARLDIEMSAMLKEQLVKVFSLVKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMDLRYRDE--RAMESRGKGRQSVWEFRRDGLEGMRLRKGRGIQVNYPSFVWILKWEFRTGLEGPGL--------------------------------------------------------TIAQKIWYCIATVGGQYTWARLQSFSAFRRWGDSEQRPLARRAWILIQRVEGLYKVASFGNLLVFLYTGRFRNLIERVLKARLVYGSPNMN-RAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKKILS 265          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig688.3.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKS8_9PHAE5.350e-19469.37RING-type domain-containing protein n=2 Tax=Ectoca... [more]
W7TYI4_9STRA7.390e-5833.13Peroxin-2 n=1 Tax=Nannochloropsis gaditana TaxID=7... [more]
D8RZT6_SELML3.720e-3425.59Uncharacterized protein TED3-2 n=4 Tax=Selaginella... [more]
L8HGF4_ACACA6.300e-3425.91Pex2 / Pex12 amino terminal regioncontaining prote... [more]
A0A4D9D9T6_9STRA1.850e-3330.89Pex2_Pex12 domain-containing protein n=1 Tax=Nanno... [more]
A0A7S0SPP6_9CHLO1.490e-3128.81Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A1Y1HJW7_KLENI1.900e-2924.28Peroxin-2 n=1 Tax=Klebsormidium nitens TaxID=10523... [more]
UPI00064503DB5.990e-2728.93hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A1W0A7A5_9STRA7.080e-2734.36Peroxin-2 n=1 Tax=Thraustotheca clavata TaxID=7455... [more]
A0A835K6R7_9ROSI9.290e-2626.79Peroxin-2 n=1 Tax=Salix dunnii TaxID=1413687 RepID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig688contigP-littoralis_Contig688:4038..12325 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LL84
Preferred namePEX2
PFAMsPex2_Pex12,zf-C3HC4
Model size2260
Max annot lvl2759|Eukaryota
KEGG koko:K06664
KEGG TC3.A.20.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000038,GO:0000122,GO:0000151,GO:0000152,GO:0000209,GO:0000280,GO:0000428,GO:0000910,GO:0001764,GO:0003006,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0005829,GO:0005911,GO:0006082,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006694,GO:0006699,GO:0006807,GO:0006810,GO:0006886,GO:0006928,GO:0006996,GO:0007031,GO:0007049,GO:0007112,GO:0007140,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007285,GO:0007286,GO:0007399,GO:0008023,GO:0008104,GO:0008150,GO:0008152,GO:0008202,GO:0008206,GO:0008270,GO:0008285,GO:0008610,GO:0009056,GO:0009057,GO:0009058,GO:0009062,GO:0009314,GO:0009416,GO:0009506,GO:0009628,GO:0009639,GO:0009640,GO:0009791,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016049,GO:0016053,GO:0016054,GO:0016477,GO:0016558,GO:0016567,GO:0016591,GO:0016593,GO:0016740,GO:0017038,GO:0019216,GO:0019218,GO:0019219,GO:0019222,GO:0019395,GO:0019538,GO:0019752,GO:0019787,GO:0019941,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0030054,GO:0030154,GO:0030163,GO:0030258,GO:0030880,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031400,GO:0031647,GO:0031648,GO:0031903,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033036,GO:0033206,GO:0033233,GO:0033234,GO:0033365,GO:0033768,GO:0034440,GO:0034613,GO:0036211,GO:0040007,GO:0040011,GO:0042127,GO:0042579,GO:0042592,GO:0042632,GO:0042886,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043574,GO:0043632,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0044743,GO:0045184,GO:0045540,GO:0045892,GO:0045934,GO:0046394,GO:0046395,GO:0046872,GO:0046890,GO:0046907,GO:0046914,GO:0048137,GO:0048145,GO:0048147,GO:0048232,GO:0048285,GO:0048468,GO:0048515,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050678,GO:0050680,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051301,GO:0051321,GO:0051603,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0055029,GO:0055044,GO:0055085,GO:0055088,GO:0055092,GO:0055114,GO:0060255,GO:0061630,GO:0061640,GO:0061659,GO:0061695,GO:0062012,GO:0065002,GO:0065007,GO:0065008,GO:0070013,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072330,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0090181,GO:0098588,GO:0098805,GO:0106118,GO:0140013,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1902679,GO:1902930,GO:1903046,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1990234,GO:1990351,GO:1990415,GO:1990429,GO:2000112,GO:2000113,GO:2001141
Exons8
Evalue1.93e-194
EggNOG OGsKOG2879@1|root,KOG2879@2759|Eukaryota
Descriptionprotein import into peroxisome matrix
Cds size1392
COG categoryS
BRITEko00000,ko00001,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig688.3.8prot_P-littoralis_Contig688.3.8Pylaiella littoralis U1_48polypeptideP-littoralis_Contig688 4292..11352 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791425.7627878-UTR-P-littoralis_Contig688:4037..42911680791425.7627878-UTR-P-littoralis_Contig688:4037..4291Pylaiella littoralis U1_48UTRP-littoralis_Contig688 4038..4291 +
1680791425.860575-UTR-P-littoralis_Contig688:11352..114031680791425.860575-UTR-P-littoralis_Contig688:11352..11403Pylaiella littoralis U1_48UTRP-littoralis_Contig688 11353..11403 +
1680791425.8707016-UTR-P-littoralis_Contig688:11762..123251680791425.8707016-UTR-P-littoralis_Contig688:11762..12325Pylaiella littoralis U1_48UTRP-littoralis_Contig688 11763..12325 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791425.7754288-CDS-P-littoralis_Contig688:4291..45251680791425.7754288-CDS-P-littoralis_Contig688:4291..4525Pylaiella littoralis U1_48CDSP-littoralis_Contig688 4292..4525 +
1680791425.7896736-CDS-P-littoralis_Contig688:6935..70131680791425.7896736-CDS-P-littoralis_Contig688:6935..7013Pylaiella littoralis U1_48CDSP-littoralis_Contig688 6936..7013 +
1680791425.8027544-CDS-P-littoralis_Contig688:8189..84331680791425.8027544-CDS-P-littoralis_Contig688:8189..8433Pylaiella littoralis U1_48CDSP-littoralis_Contig688 8190..8433 +
1680791425.8142188-CDS-P-littoralis_Contig688:9181..94051680791425.8142188-CDS-P-littoralis_Contig688:9181..9405Pylaiella littoralis U1_48CDSP-littoralis_Contig688 9182..9405 +
1680791425.8270738-CDS-P-littoralis_Contig688:9813..99541680791425.8270738-CDS-P-littoralis_Contig688:9813..9954Pylaiella littoralis U1_48CDSP-littoralis_Contig688 9814..9954 +
1680791425.8410192-CDS-P-littoralis_Contig688:10329..106621680791425.8410192-CDS-P-littoralis_Contig688:10329..10662Pylaiella littoralis U1_48CDSP-littoralis_Contig688 10330..10662 +
1680791425.85092-CDS-P-littoralis_Contig688:11214..113521680791425.85092-CDS-P-littoralis_Contig688:11214..11352Pylaiella littoralis U1_48CDSP-littoralis_Contig688 11215..11352 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig688.3.8

>prot_P-littoralis_Contig688.3.8 ID=prot_P-littoralis_Contig688.3.8|Name=mRNA_P-littoralis_Contig688.3.8|organism=Pylaiella littoralis U1_48|type=polypeptide|length=464bp
MKPVTTTKPPEGAKSPAGGVYGGTLTETATAAADVSVMRVNQLDAGVLDT
ELQGLLKTQLGRVCSRLPAGTLERFQPEVDALFNLLMFRFTIWVHRPTPG
MHLQGLRYRNESGRAMPPAGGRDGASDGGGGGIDDVVAGGAPAAAAAAAA
AAASGISALALGWEGGGAEAVGGALGEGGGASNGSGVVPTSASTPTSSLG
TSTGMGPSPSPLAVPLPFWGDAAPTRTQRLAHGLLSVGVQWGFARLRRHG
LVHGWGGAEAGSARRVAWHVLGRLETMFRVVWMVNLLLFLKSGKYASPVD
RLVQMRMVHDRADPGPRSINYQFLNRRLLWDHWAKMAYVVAPLINWGSVR
RAVSGGAGRLRREARALGIFGGGGGNGNGRGSMLVGRGASARAGVEGTAA
ASAAVLTACAECGANPAKTPYLTECGHVFCYYCARVACTVDPRYACPRCG
EYFATSRRWSQPG*
back to top

mRNA from alignment at P-littoralis_Contig688:4038..12325+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig688.3.8 ID=mRNA_P-littoralis_Contig688.3.8|Name=mRNA_P-littoralis_Contig688.3.8|organism=Pylaiella littoralis U1_48|type=mRNA|length=8288bp|location=Sequence derived from alignment at P-littoralis_Contig688:4038..12325+ (Pylaiella littoralis U1_48)
GCGACGGAGCGACGGACGGCCGCAGCAGTCGGGCCCAAACCAAGCAAACA TCATCAACGGCCGCACCTGTGATACTTCCGTTGATCGCTTCGGTGGCTCG CCACGAAGGCTTCCACTTTGCACACAGTGTGTTTATCTCTACATACTTGA CATCAGTCTGCATGTGTTTGAGGGGGGCTTTTTACCGCACTGGCTCTCTG TGGTCAGAGCAGGGTTTGAGATCAGGTACGACTCGCCTAGCCGCCTTGGC GTAAATGAAGCCCGTTACCACCACCAAGCCTCCCGAGGGAGCAAAGTCAC CGGCCGGAGGAGTCTACGGTGGTACCTTAACAGAAACAGCAACAGCAGCA GCAGATGTTTCGGTCATGCGCGTGAACCAGCTGGACGCCGGGGTGCTAGA CACGGAGCTACAAGGCCTCCTGAAGACGCAGCTGGGTCGCGTTTGCTCAA GGCTTCCTGCCGGAACGCTGGAGCGCTTCCAGCCAGAGGTGTTTGTGTCA CGAAACACAGCAGCAGTACTCGTAGTGACAGGAGTGTATGCCACATTCGT GCCAAAAACGTTTCATACACAACGTCGGCAGCCGTGTCTTTCTATGTACG TGCTACTGCTTTGGCCTTCAATACTCTGTGTGCCCCTCTACTGCCGCTGT ATATACCGTTTTTCCCGTCCGGGACAGATATAATACAAGTACCGGTATCA CACGCGCTTTGGGCCGATTTCCAAAACTCGGTTCCTGCCGTACTCCACCC CTCAGAGGTATCTTCTTATTTTGTAGACAAGGGTTGGCTTCCCGTGCTAC ATGTGCGCAATCAGCACACACACACACACACACACACACACACACACACA CACACACACACACACACACACACACACACACACACACACACACACACACA CATACACACACAGTCCATATATTTTATTTATTTTGTTTTTTTCCTCCTAG CACGATATGTGCCTGGTTTGTGACCACGGGCTAGACTGCGGCGGTAGTGA GCTAATGTGAGAATCAACAACAACAACAACAACACACACACACACACACA TACGCACACACATTTTTTTTTTTTTTTCTCCTAGCACGATATGTGCCTGG TTTGTGACCACGGGCTAGACTGCGGCGGTAGTGAGCTAATGTGAGAATCA ACAACAACAACAGCACACACATACACACACACACACACACGCACGCACCT CTTTGGGCAGATTGTTAGGGCTTGACAACTCTACAACGAAGACACAGAAG CTGTCGTATGATGTCACGAACGCATGTATCATAATACAAGTAGAGCAGAC TACCGGTACGTGTCTCACGCCTTTGGGTTCGACTTTCATAAATACATCAA ACCTTGGTTGCAGGTTATTGTTGAACTGCTGCTGTGTACTGCCTGTAATC CGCGACGATCAAGGAGGGGGTGTACGAGTAGTATGATGTATTTTTTTTAT GGAAACAAAAAATCTCGACGAGATCCTGTCCAAATGTCGGTGTCTTTTTC AGTTCGGCAATATGATACAACAAGCAGCAGTACTGCTGTCGGTCTTCTTG CTGCGGAGATATCGAGAGTGTGGCAAAAATCAACCCGTGGGTGTGTGCTG CTTTACTATCTACGAACGAATTGTTTCATCATATGTCAAGTAGGTTGGAT CGTATGGCGTTCCAGGGGGTGCCGCGGTATTATTTTCGATCTACCCATTT ACCCACCGGGTATCGCGCAATATAACACGGCACTCCTCTGGACCCATTTT CAATTAAAGGTCGACTATTCCACAGCGAACAGAATGCCAACACACCGCCG TCGAATGGTGTTTGTCGACCTATTTTTCGGCAGTCTCGCGCTCGACGAGA CGAGATGAGATGAGATGAGATGAGATGAGATGAGATGAAATGAGACAGTT CCACGAGTACGACACCGAACGATCACCCTTATCGGGACTTGCCGATACTC TCTTCTGTTGTGATCTCGTCCCAGGGACAGCAGTTGAACCATGGCCACTG GAGAACGCCGAGATGCCCCATTTCGGCAGCCGTGTAGCACGTCATCTCGT CCCAGGGATAGCCATTCGAGTGCGCCCACTCTAGAACGTCGAGATGACTC CCTTCCAGTACAATGATATCATAGGAGCTTTACCATCAGTCCAGGGGGTG CTGGTATTTTGTACTGAGTTCGTGGGGGGGCACTTTACCGTTAGTAATCG TATAACATGCCCCCGAGACCTCCCGTGGACCGATTTTTATTTTTCAACAT CTTTTTTGTTCACGACGAAGGGAATGCCAACATCAAACGAACGATGTCTA CGTTCTCGGGACTCTCGCGACAAGATGGTTCCATATTTTCGACGCCAATC AGTGAACCGTTTCGGCACCCGCCGAACCTCTTTTCCGCCGTGGAGTAATC AAGCATTGGAAATCAGTCCGGGGGGGGGGTGGTATATTATGCGACGTATG CTACACCGGTAGTAACACTATGCCCAACGCTCAAGGCGCCTACCGTCAAC TTCTTCAGCGCGGGGGTGAAAACTGTACGTGGTTGGGATAAATTTCAAGT TTCAAATTCAAAATTTGAAATTTAAACTGTCTAATTTCTTTCTGATTTCT ATTTTCTAATTTATTTTTTCTGATTTCTAATTTTAATTTTCCAAAGTCGC CTCCATTTGATCTTGTTGAGCCTACCTAATGCGGATCGTAAAGCGGTTAC GGGTAGTGCCCACCGGATAATCTTTGACCTCATGCAATACGCGACGGGTT TTTTGCACAGGTAACATAATATATCGGTAACTTAACTTTTTGGTCGCTGC CTACGTACAGCATGCCGTACACGCCGTTCATACGCACTCAATCCCCCCCC CCCCCTCCCTCCCTCCCTCCCTTCCCTCCTCCGTCCCGCGCAAAAAAGGT GGACGCTTTATTCAATCTTCTCATGTTCCGGTTCACGATCTGGGTCCACC GCCCAACTCCAGGGATGCATCTACAGGTTGGTGCGCTATGTCGGTGGTCG AGGCGTAGCATTCACGACGTCGATTAGTTCAATCGTAGCTACAAAGACAC ATTTGAGGGTTTCAGTTTGCATTTGCCTTCGTTTGGACGACGGTCTGACG TATATACATTGCGCACCAAGCAACGGGTAGGTAGCAGCGAGTACAGCAGT AAAAGTGAGATGCAACAGCCAGTACCAAGTACCGGCCAGTGCTTCAAATT TGTTCCGCATTTGGTGTGTGGTGCAGCTCCATCTCCCCTGATATCACACC GGCAATCTGCCGTTTCTTTCTCTTTTGCTTTGCCGTCATTTCATGCATCT ATCAATTCTGCATGATGCACCACACCATAAGGCTGGTCTGCTCTTGAAGT TGCTTCGTCTCCACATCAATCAGTCTGACCATCTGTGTATTATGTGCGAT ACACCGAACCATTGTCCGAGTCTATCTTCGATGATTCGTCTCTCTCGTTC AGCCAGTCTGACGATGCGCTCGTTCTGCGCGCACTCACTATTGTTTTTTA TAATTCGTTCATTTTTTATTTGACTTTCGACTGACAACAACGCGCTGAGA AAGCATGCGCACCGATACAGCAGTACTACAACAGCAGTATGATACGCTCA CCCAAAATACCCAGATCAATCCATAGAGTTGTTGTACATGCAGCAAAACG CCGGCAATCATTCAACACACACCAGCAGAACTCCAAGACCCAACACTACA CCAAGCATCCATTTTCCACCAGTGTTTTGTTGTTGATCTTGTCTCTTGTT GTCTCTCTCCCTTAGCCAGTCTGACAAACCAGGCGGTACTTCGTCAGGTG GGTTGTTGCCTCTCTCTCCCTGAACCCCCCCCCTCCGTTTTTTACAAATT TTATGAAGACCCCAAAAAGGCTGATACATTGATTTGGTTCGATTTGTCAC GAACACAACAAGGCAAGGAAGTACGTGCGTACGTGCAAACTACGTGTACG AAGCACGAAAAATAGCAGAGAGAAAATCCAGGGCAGCAGTGACCTGCTGC TGCCTGTCGTACGAACATTCCATGGAATATTCCATAATCCCATCATCATC GTACGTAAGATTAATATTCGTTCATATATTTGCATGAAACGTGCATTCTT TGCGATTCGTTCTTTGCAATAGAACGTCCACCCAATCGACCGGCTGCTGC AGGGTCTGAGGTACCGCAACGAGAGCGGTCGTGCCATGCCTCCTGCCGGG GGCAGGGACGGCGCTAGCGATGGCGGTGGCGGTGGTATTGATGATGTTGT CGCTGGTGGTGCTCCTGCTGCTGCCGCTGCTGCTGCTGCTGCTGCTGCCT CCGGCATTTCTGCCTTGGCGTTGGGATGGGAAGGTGGCGGCGCGGAAGCA GTTGGCGGGGCATTAGGTGAAGGAGGCGGGGCTTCAAACGGATCAGGTCT ACTGCTGTCTGTACCGACCGGTTTTTATTTTTGTTCTGCCTTTCTGCCGC AAAACTGCAGTAGCAGGTATGATACGATTGAAAGCAATTACTGATTTTAC CACTTTCCATTTTGCAGGCACAGCGCAGTTCAGGGCGAGCCATCGACCGA GCTCAGATCCGAGGCAGGTTAAGACCAGGGCCAAAACTTATCCGAAGTCA TCAATGCCGTTGTGCCCCCCCAGCTCAAACCTGAGCTTCGTCAATGAACG GACCACGCGAAATTCTACGACACCTTCGACTAGTTTTTGCCCCGAGCTTG ACCCCAACTGAGCCTTTGGAAGCCGAGCTTGGGTCTCTGGACCCTCTTGA ATACTCTCTCTCTGTTAAGTGTACGCGCAAAAACCCAATCCAAAACCTAT CCCACGCACCGACCCATCAACACGCCGATGCATCCACCCACCACCAACCG CCCGGTCGCCGCTTGCTGCACATTTTTTCACCGAACGGATCGGGTACTGC TGTACAATAAATTCAAAAAAAAAAACTTACGAAGTATTTCGATGTTTCGA AGCACGATTTTTCTTCTTCTTTTTCTTGTCTTGCCAAAAACTGCAGTAAA AATTGAAACTGAAAAACTGCAGTAAAAACTGAAACTGAAAACCTGGTTTT CATTTTACGTACACACATGTGCGTGTGTGTTGATGTGTGTGACGCCCAGC AAAAACCACGCAACCACTCGCTGCATATTTTTCATCAAACGAAGGCGTCG TACCGACATCGGCATCGACACCGACATCGTCACTGGGTACGAGCACGGGA ATGGGACCATCACCATCGCCGCTGGCGGTGCCCCTGCCCTTTTGGGGAGA CGCTGCTCCCACCCGGACGCAGCGCCTGGCGCATGGGCTGCTGAGCGTCG GCGTGCAGTGGGGCTTCGCCAGGCTGCGGAGGCACGGGCTTGTGCACGGG TGGGGCGGGGCGGAGGCGGTGAGTGAGTTGGGCAAGCAAACGAGCAAACA GCCCGAACAAACAAACTGCCAGGCACCCAATAGGACAAACAAACAAACAA ACAAACAAACAAGCAAACACACAAACGGGTTTAATAAAAATAAAACGAAA TGAACGAACAGAAAATGACCAAAAACAAGAGAGAGACATGGGGTTTGGAG GTACCTGATATGCACGAGTGCTGCTGCGACTGCCGTCTGGCTGGCTTGTG CATGTCTGCTTTGGAGCATAACGTCCCAAGTTCCTAAAGAAAGCGACGAG TGTTGGGCAGATGCACCGATATGATCTGGCACGTTTACCACCGCTCACTC ACCCCCAAGATCCCCATTTATTTTTAAGTTCTTCGTGTATGTGTGTTATT GTTTTTTCCCCCTCATAAAAAACCAGGGCAGCGCACGCCGCGTGGCCTGG CACGTCCTGGGAAGGCTGGAGACCATGTTTCGCGTGGTCTGGATGGTGAA CCTTCTGCTGTTCCTCAAAAGCGGTAAATACGCATCGCCGGTCGACCGCC TGGTTCAAATGCGCATGGTAAATGAAAACTTTTTTTTTCGGGGGGGGGGT TGCATGCCACACACACCGCAAGGGTGGACGAGAACCATCCCGGTCTCTCT TAGTCTCCGTGATAGTTTACAGAAGCAGCACTTGGTTTTTTACGGTACCA CAGCTTGATTCACATGCTCCATGCAAAAAAAAACACACCCACACACATAT TTGTGTGTGAATGCTCATACGTAACTCACACGGCAGAAGAGTGTTTCCCC AGTTTTTTACACATTGTAATGATGTGCTCTGAGTTTCCGTGAGTTCCACG GCCTGGTTCGAATGCGCGTGGTACAAGCAAAAACACACGCTCGCTCGCAC ACGAACACACGCACAAACTTACCCCCCCCTACACACGCTCAGGTTCACGA CCGAGCAGACCCGGGCCCCCGCTCGATCAACTATCAGTTCCTCAACCGGC GGCTCTTGTGGGACCACTGGGCCAAGATGGCCTACGTCGTTGCGCCGCTC ATTAATTGGGGGTCTGTCCGGAGAGCCGTCTCGGGGGGGGCAGGGCGCCT GAGAAGAGAAGCCCGCGCCCTCGGAATTTTTGGCGGTGGCGGCGGCAACG GTAACGGGAGGGGATCCATGTTGGTGGGGAGAGGGGCGAGTGCCCGTGCG GGGGTGGAGGGGACGGCGGCAGCATCGGCGGCAGTGCTAACGGCGTGCGC GGAGTGTGGAGCAAATCCCGCAAAGGTGATTAAGGAATGAAAAGCTGCGT GTGTGTGTATGTGCGTGTGTATGTGTGTGAGTGTCGTTTGCCGCCCAAAG AAGGGCCTTCGTCGTCTACATCAACATTTATTCCTGTTTTTTTTTTTCCG TCTACTGCTGTAGTGCTTGTTTGCTCGCTAGCCGCCCGTTTTTTTTTTAA GTTCACGAAGTAGAGCGGGTGCGACCCGATAGACGCCTCCCACCCACCCG CCTCACCCAACACCCACCCACTCATCCAGTCACGTCCATATCTATCTATC TATTTATCTCTTTCTCCATTCCCCTTAAATATCGACCTAACGACCACACC CCGCCCACCCAAACCCACCCAAACCCACCCCGACCCACCCAAACCCACCC GCTCCCGCCGTCGGCCCAACCCTTGCCATTTCGGTTGCACCCCTCACGGG CCGGACTGATCTCGTCGAATCGCCCTCTCGCTATTTTTTGCCGGTCGACA CCTGGCATGACATGGCATGACATGCCATGGTGTGATACCACATGATGCGA TATCATGTCGTGTATGTAACAAAATAGACTCCCTACCTGACAGAGTGCGG CCACGTGTTCTGCTACTACTGCGCGAGGGTGGCTTGCACGGTGGACCCCC GCTACGCGTGTCCACGATGCGGGGAGTACTTCGCCACTTCTCGCCGATGG TCACAGCCGGGGTGACAGCAATACAATCATTTTACAGAGTATCGCCTTTT CTTCGACAGTTATTTTATTTCATTTCGTCTTTAGTGTGCTTGGAAGTAAG TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT GTTGTCTACTCGTCTATTCAACTGTTGTCTCTCTAGCATACTCACATACG TGTGTTGTCATCCCATGTTCTCTGGCACACTAGTCTGCAAACTACAGGCT AGGCCCATCGACGGGGTCACACAGGAGGAAGGTCAACACAGGAGGAGTTA CCCCCACCTTCCTTCTGCGGTACATGCGTGAGATTTTTTCTCGCGAGCAG GGGTCCGCGGTCCCTACCCTCGTCGGCGAAGCCGAATCTGATTTTACTAA CAGCATAGCCGCTTTCAAAGTAGCAAAGGAACACATTCACCGGGAATCGA ACCCCCGTTCCTCTGCATCTAGTGGTTAACGAGGGACCACTAGTCCACCG GGGCGACCGTGAGTACACTGGTGGGAGTGTTGTTGTTTAATCGTCTATTC AAGCAAGTGGTTTAGCATACGTGCACTATTTAAGGCAGAAGTAATTAGTG TCCATCAGGGCTGGCGCCTGTTTTCGATTGTCGGTGCTCTGCGCGCGAGG TTGGTTGTACACATCATGTGCATCGAGGATCTTTATGACTGGCACCCGCG TGTCGTCAAATAGTCCTGCAATATCTTCATTCGCCGCCGTGAAGCTATCT CCATAAATGTACATTTATAGATGTGTCCGGTTTGAGCGGCGTCCGCCCCC TCGCAGATTTTTCCTGGAGGATTGAATCTCTGCTCAGATATATGTACCTG GAAATAATGTGTGTGGCGGCAGCTAGCCAACTGGTGGTAACCCAGGGTAA GAGGTTTTATCTGCTGAAACGTGGCTGAGCGTGTGACCTTGGTTGGTGCG ATGGAAGGGTTGTGTTTTAATGTGGTGTGCTTTTTCGT
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig688:4038..12325+

>mRNA_P-littoralis_Contig688.3.8 ID=mRNA_P-littoralis_Contig688.3.8|Name=mRNA_P-littoralis_Contig688.3.8|organism=Pylaiella littoralis U1_48|type=CDS|length=1392bp|location=Sequence derived from alignment at P-littoralis_Contig688:4038..12325+ (Pylaiella littoralis U1_48)
ATGAAGCCCGTTACCACCACCAAGCCTCCCGAGGGAGCAAAGTCACCGGC
CGGAGGAGTCTACGGTGGTACCTTAACAGAAACAGCAACAGCAGCAGCAG
ATGTTTCGGTCATGCGCGTGAACCAGCTGGACGCCGGGGTGCTAGACACG
GAGCTACAAGGCCTCCTGAAGACGCAGCTGGGTCGCGTTTGCTCAAGGCT
TCCTGCCGGAACGCTGGAGCGCTTCCAGCCAGAGGTGGACGCTTTATTCA
ATCTTCTCATGTTCCGGTTCACGATCTGGGTCCACCGCCCAACTCCAGGG
ATGCATCTACAGGGTCTGAGGTACCGCAACGAGAGCGGTCGTGCCATGCC
TCCTGCCGGGGGCAGGGACGGCGCTAGCGATGGCGGTGGCGGTGGTATTG
ATGATGTTGTCGCTGGTGGTGCTCCTGCTGCTGCCGCTGCTGCTGCTGCT
GCTGCTGCCTCCGGCATTTCTGCCTTGGCGTTGGGATGGGAAGGTGGCGG
CGCGGAAGCAGTTGGCGGGGCATTAGGTGAAGGAGGCGGGGCTTCAAACG
GATCAGGCGTCGTACCGACATCGGCATCGACACCGACATCGTCACTGGGT
ACGAGCACGGGAATGGGACCATCACCATCGCCGCTGGCGGTGCCCCTGCC
CTTTTGGGGAGACGCTGCTCCCACCCGGACGCAGCGCCTGGCGCATGGGC
TGCTGAGCGTCGGCGTGCAGTGGGGCTTCGCCAGGCTGCGGAGGCACGGG
CTTGTGCACGGGTGGGGCGGGGCGGAGGCGGGCAGCGCACGCCGCGTGGC
CTGGCACGTCCTGGGAAGGCTGGAGACCATGTTTCGCGTGGTCTGGATGG
TGAACCTTCTGCTGTTCCTCAAAAGCGGTAAATACGCATCGCCGGTCGAC
CGCCTGGTTCAAATGCGCATGGTTCACGACCGAGCAGACCCGGGCCCCCG
CTCGATCAACTATCAGTTCCTCAACCGGCGGCTCTTGTGGGACCACTGGG
CCAAGATGGCCTACGTCGTTGCGCCGCTCATTAATTGGGGGTCTGTCCGG
AGAGCCGTCTCGGGGGGGGCAGGGCGCCTGAGAAGAGAAGCCCGCGCCCT
CGGAATTTTTGGCGGTGGCGGCGGCAACGGTAACGGGAGGGGATCCATGT
TGGTGGGGAGAGGGGCGAGTGCCCGTGCGGGGGTGGAGGGGACGGCGGCA
GCATCGGCGGCAGTGCTAACGGCGTGCGCGGAGTGTGGAGCAAATCCCGC
AAAGACTCCCTACCTGACAGAGTGCGGCCACGTGTTCTGCTACTACTGCG
CGAGGGTGGCTTGCACGGTGGACCCCCGCTACGCGTGTCCACGATGCGGG
GAGTACTTCGCCACTTCTCGCCGATGGTCACAGCCGGGGTGA
back to top