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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 2359 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 2301 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791425.5694427-UTR-P-littoralis_Contig688:14358..14414 | 1680791425.5694427-UTR-P-littoralis_Contig688:14358..14414 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig688 14359..14414 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791425.5832243-CDS-P-littoralis_Contig688:14414..16005 | 1680791425.5832243-CDS-P-littoralis_Contig688:14414..16005 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig688 14415..16005 + |
| 1680791425.5976944-CDS-P-littoralis_Contig688:16047..16552 | 1680791425.5976944-CDS-P-littoralis_Contig688:16047..16552 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig688 16048..16552 + |
| 1680791425.608205-CDS-P-littoralis_Contig688:16645..16850 | 1680791425.608205-CDS-P-littoralis_Contig688:16645..16850 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig688 16646..16850 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig688.8.1 >prot_P-littoralis_Contig688.8.1 ID=prot_P-littoralis_Contig688.8.1|Name=mRNA_P-littoralis_Contig688.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=767bp
MPKRREIVEQPISNGVLGASAANGTVPSPSLPPPLSLLDPSEASNHNKHQ
GAFDSDADSKLRQEQEEGMRRRSAASSPASLVGDSTEGTGKGKGKQQGAT
SEEASRTVRERAAADINDGSISPNGSTTTKYSSSAGRGAAAVATAAAAAA
VVEAVTTAVQHVSSSGTRRRPRKIFRGSPRTDHQHLTPATPVPGLSGRGR
GGARLVQPKRTTRNTGTTTGASTPTQRGCEKATLTTAAAAAAAIAEKIVP
GVSPGRCKSTGMAEAAATTPGLRSEDGLLRQPASSLGVGRGHLASVDRAV
TRRSSAAQEATTTPPTVAALGGSNRKGLTRTTTTSIPSPKPTTANSSTTG
QSGRACQRQPCSIIYACFGFPGGKRTLCRKHRQDGMVNLDTHNTGKVSGT
RGGGGGGGGSSSTRRKRESNNGGTSGGRGTSGAGGVGIASSGAAAKTVSR
RRQETEGSGGAKTAVVAREPGTGNKDLTSASTAAAAVTFTANGQETPERL
ARSAVASRMPSSSPSGKTSGKRKSSSSSSSRCPVPSRFGWITTRKRVCCG
AHKQFGMVNLDKTVSRYGSDQGKGKGRKGVVKRATGDQPRGGGVVQQESE
ITRKKIVKSKKASSGLAKRGGAGKLIKQPAVAAKVKRRRRSKEEGAAGRD
GVGIVGGGGCNGSSHANGDTGGSGGGGAGGGAAPIKRSHAVVTVSRLRRV
ARRPKYQACKSPACVHHASFGFLDAPGLKREYCHSHAPPGMINLTAVRKK
ERTKTDDTTAAGAVVPA back to topmRNA from alignment at P-littoralis_Contig688:14359..16850+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig688.8.1 ID=mRNA_P-littoralis_Contig688.8.1|Name=mRNA_P-littoralis_Contig688.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2492bp|location=Sequence derived from alignment at P-littoralis_Contig688:14359..16850+ (Pylaiella littoralis U1_48)
CATGATCGGATGGTGGTTGCCAGACAGCGTTGCACACGGTTGCGCAGCGT
TGCATCATGCCGAAAAGGAGAGAGATAGTGGAACAACCTATTAGCAATGG
TGTCCTTGGAGCTTCTGCTGCAAATGGGACCGTGCCGAGCCCCTCTCTGC
CTCCACCATTATCCTTGCTCGATCCTTCAGAAGCATCCAACCACAACAAA
CACCAGGGCGCATTCGATAGCGATGCCGACAGCAAGCTAAGGCAAGAGCA
GGAGGAGGGTATGCGTCGGCGCTCTGCTGCTTCTTCTCCTGCATCGCTGG
TGGGAGACAGCACAGAAGGGACTGGTAAAGGGAAGGGGAAACAGCAGGGT
GCCACAAGTGAAGAGGCGTCTCGGACCGTGAGGGAGCGAGCAGCGGCAGA
CATCAACGATGGCAGCATTTCACCCAACGGGAGCACCACCACCAAGTACA
GCAGCAGTGCGGGCAGAGGTGCAGCAGCGGTAGCGACAGCAGCAGCAGCA
GCAGCAGTAGTCGAGGCGGTTACGACTGCCGTGCAGCACGTCTCTTCTTC
GGGAACACGCAGACGCCCGCGAAAAATATTTCGCGGATCACCAAGAACTG
ACCATCAGCACCTCACTCCCGCAACACCAGTACCCGGGTTAAGCGGGAGG
GGAAGGGGCGGGGCGCGTCTGGTTCAACCGAAACGGACAACGAGGAACAC
TGGCACCACCACTGGCGCTAGCACTCCGACTCAACGTGGGTGCGAAAAGG
CAACGCTTACGACTGCTGCTGCTGCTGCTGCTGCTATTGCTGAGAAGATC
GTGCCGGGGGTATCTCCAGGGAGATGCAAGAGTACCGGGATGGCAGAAGC
AGCAGCAACGACACCAGGACTCCGCAGCGAGGATGGCCTGCTGCGACAGC
CCGCCAGCAGTCTTGGTGTTGGGCGCGGTCACCTGGCATCGGTCGATCGT
GCTGTGACGCGAAGAAGTTCAGCTGCTCAGGAGGCGACAACAACGCCGCC
GACCGTGGCAGCCCTTGGTGGAAGCAACCGGAAAGGACTGACAAGGACAA
CCACCACTTCAATACCGTCCCCCAAGCCCACTACCGCCAACAGCAGCACC
ACCGGCCAATCTGGCCGCGCGTGCCAAAGGCAACCCTGCAGCATCATTTA
TGCGTGCTTTGGGTTTCCGGGTGGGAAGCGCACGTTATGCAGGAAGCACC
GGCAGGACGGCATGGTCAACCTTGACACACATAACACCGGCAAGGTTTCC
GGCACCAGAGGCGGCGGCGGTGGTGGCGGTGGCAGTAGCTCAACGAGGAG
GAAGAGGGAATCCAACAACGGCGGCACCAGCGGCGGCAGGGGCACCAGCG
GTGCAGGTGGGGTTGGAATCGCATCGTCTGGAGCAGCAGCAAAAACGGTT
TCGCGTCGGCGACAGGAAACAGAAGGCAGCGGGGGCGCAAAGACGGCCGT
GGTGGCTAGAGAACCCGGTACGGGCAACAAGGATTTGACTTCTGCTTCTA
CTGCTGCTGCGGCGGTTACGTTCACGGCTAACGGGCAGGAGACACCCGAG
CGTCTTGCGAGGAGTGCTGTTGCTAGCCGTATGCCGTCTTCATCGCCCTC
GGGGAAGACCAGCGGCAAGAGAAAAAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGTAGCATTCACAAACCCATCTGTGGCGAGGAAGGGTGCCCGGTA
CCGTCTCGATTCGGGTGGATCACCACCCGAAAAAGGGTGTGCTGCGGGGC
CCACAAGCAGTTCGGTATGGTCAACCTCGACAAGACGGTTTCCCGCTATG
GCTCCGATCAAGGCAAGGGCAAGGGCCGGAAGGGAGTGGTAAAGCGTGCT
ACTGGGGATCAGCCGCGCGGAGGTGGCGTCGTACAACAAGAGAGCGAAAT
CACCCGAAAAAAAATCGTAAAATCCAAGAAGGCCTCGAGTGGTCTCGCGA
AACGCGGTGGTGCGGGCAAACTCATCAAGCAGCCGGCCGTCGCCGCGAAA
GTCAAGCGGAGAAGACGATCGAAGGAAGAAGGTGCCGCCGGTCGTGACGG
TGTAGGCATTGTTGGCGGTGGTGGTTGCAATGGTTCAAGTCATGCGAACG
GTGACACCGGCGGCAGTGGTGGCGGCGGCGCTGGTGGTGGCGCCGCGCCA
ATCAAGAGATCGCACGCCGTTGTTACCGTAAGCCGGCTCAGAAGATCGGA
GGAGGAAGGGGCGGCCGCGTTGGCGACGGTGGTGGTGGGCATGAGCAAGC
GTCGGGCGTCATCGAAGGGAAAGGGGGTGGCGATCACGGTGGCAAGGCGG
CCCAAGTACCAAGCCTGCAAGTCCCCGGCGTGTGTGCACCACGCGTCGTT
CGGGTTCCTGGACGCGCCGGGGCTGAAGAGAGAGTACTGCCATTCGCACG
CGCCCCCGGGAATGATAAATCTTACGGCCGTGCGCAAGAAGGAGAGGACG
AAGACGGACGACACGACCGCCGCCGGTGCCGTTGTCCCCGCA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig688:14359..16850+ >mRNA_P-littoralis_Contig688.8.1 ID=mRNA_P-littoralis_Contig688.8.1|Name=mRNA_P-littoralis_Contig688.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2301bp|location=Sequence derived from alignment at P-littoralis_Contig688:14359..16850+ (Pylaiella littoralis U1_48)
ATGCCGAAAAGGAGAGAGATAGTGGAACAACCTATTAGCAATGGTGTCCT
TGGAGCTTCTGCTGCAAATGGGACCGTGCCGAGCCCCTCTCTGCCTCCAC
CATTATCCTTGCTCGATCCTTCAGAAGCATCCAACCACAACAAACACCAG
GGCGCATTCGATAGCGATGCCGACAGCAAGCTAAGGCAAGAGCAGGAGGA
GGGTATGCGTCGGCGCTCTGCTGCTTCTTCTCCTGCATCGCTGGTGGGAG
ACAGCACAGAAGGGACTGGTAAAGGGAAGGGGAAACAGCAGGGTGCCACA
AGTGAAGAGGCGTCTCGGACCGTGAGGGAGCGAGCAGCGGCAGACATCAA
CGATGGCAGCATTTCACCCAACGGGAGCACCACCACCAAGTACAGCAGCA
GTGCGGGCAGAGGTGCAGCAGCGGTAGCGACAGCAGCAGCAGCAGCAGCA
GTAGTCGAGGCGGTTACGACTGCCGTGCAGCACGTCTCTTCTTCGGGAAC
ACGCAGACGCCCGCGAAAAATATTTCGCGGATCACCAAGAACTGACCATC
AGCACCTCACTCCCGCAACACCAGTACCCGGGTTAAGCGGGAGGGGAAGG
GGCGGGGCGCGTCTGGTTCAACCGAAACGGACAACGAGGAACACTGGCAC
CACCACTGGCGCTAGCACTCCGACTCAACGTGGGTGCGAAAAGGCAACGC
TTACGACTGCTGCTGCTGCTGCTGCTGCTATTGCTGAGAAGATCGTGCCG
GGGGTATCTCCAGGGAGATGCAAGAGTACCGGGATGGCAGAAGCAGCAGC
AACGACACCAGGACTCCGCAGCGAGGATGGCCTGCTGCGACAGCCCGCCA
GCAGTCTTGGTGTTGGGCGCGGTCACCTGGCATCGGTCGATCGTGCTGTG
ACGCGAAGAAGTTCAGCTGCTCAGGAGGCGACAACAACGCCGCCGACCGT
GGCAGCCCTTGGTGGAAGCAACCGGAAAGGACTGACAAGGACAACCACCA
CTTCAATACCGTCCCCCAAGCCCACTACCGCCAACAGCAGCACCACCGGC
CAATCTGGCCGCGCGTGCCAAAGGCAACCCTGCAGCATCATTTATGCGTG
CTTTGGGTTTCCGGGTGGGAAGCGCACGTTATGCAGGAAGCACCGGCAGG
ACGGCATGGTCAACCTTGACACACATAACACCGGCAAGGTTTCCGGCACC
AGAGGCGGCGGCGGTGGTGGCGGTGGCAGTAGCTCAACGAGGAGGAAGAG
GGAATCCAACAACGGCGGCACCAGCGGCGGCAGGGGCACCAGCGGTGCAG
GTGGGGTTGGAATCGCATCGTCTGGAGCAGCAGCAAAAACGGTTTCGCGT
CGGCGACAGGAAACAGAAGGCAGCGGGGGCGCAAAGACGGCCGTGGTGGC
TAGAGAACCCGGTACGGGCAACAAGGATTTGACTTCTGCTTCTACTGCTG
CTGCGGCGGTTACGTTCACGGCTAACGGGCAGGAGACACCCGAGCGTCTT
GCGAGGAGTGCTGTTGCTAGCCGTATGCCGTCTTCATCGCCCTCGGGGAA
GACCAGCGGCAAGAGAAAAAGCAGCAGCAGCAGCAGCAGCAGGTGCCCGG
TACCGTCTCGATTCGGGTGGATCACCACCCGAAAAAGGGTGTGCTGCGGG
GCCCACAAGCAGTTCGGTATGGTCAACCTCGACAAGACGGTTTCCCGCTA
TGGCTCCGATCAAGGCAAGGGCAAGGGCCGGAAGGGAGTGGTAAAGCGTG
CTACTGGGGATCAGCCGCGCGGAGGTGGCGTCGTACAACAAGAGAGCGAA
ATCACCCGAAAAAAAATCGTAAAATCCAAGAAGGCCTCGAGTGGTCTCGC
GAAACGCGGTGGTGCGGGCAAACTCATCAAGCAGCCGGCCGTCGCCGCGA
AAGTCAAGCGGAGAAGACGATCGAAGGAAGAAGGTGCCGCCGGTCGTGAC
GGTGTAGGCATTGTTGGCGGTGGTGGTTGCAATGGTTCAAGTCATGCGAA
CGGTGACACCGGCGGCAGTGGTGGCGGCGGCGCTGGTGGTGGCGCCGCGC
CAATCAAGAGATCGCACGCCGTTGTTACCGTAAGCCGGCTCAGAAGGGTG
GCAAGGCGGCCCAAGTACCAAGCCTGCAAGTCCCCGGCGTGTGTGCACCA
CGCGTCGTTCGGGTTCCTGGACGCGCCGGGGCTGAAGAGAGAGTACTGCC
ATTCGCACGCGCCCCCGGGAATGATAAATCTTACGGCCGTGCGCAAGAAG
GAGAGGACGAAGACGGACGACACGACCGCCGCCGGTGCCGTTGTCCCCGC
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