mRNA_P-littoralis_Contig687.27.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A6H5JG59_9PHAE (NADH-cytochrome b5 reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG59_9PHAE) HSP 1 Score: 451 bits (1161), Expect = 1.870e-152 Identity = 222/265 (83.77%), Postives = 237/265 (89.43%), Query Frame = 2
Query: 173 MAETKDTKSPMGAFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
MAE D S AFSP EFR+FPLREIE MTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYP+G VS H+F LKVGD V VKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTK TLLFAN T ADIMLK+EIDKLAAEHDNF+VVY+V +GWTG TGHVNA LIE HLPKPSGDS+IFVCGPPGM+NA+ GPKNEDK+QG++ GVLK LG+TS+ VYKF
Sbjct: 49 MAEATD--SSKTAFSPKEFRDFPLREIEDMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDTVAVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVYVVDKAEEGWTGATGHVNASLIETHLPKPSGDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKALGYTSDMVYKF 311
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A835ZLM4_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLM4_9STRA) HSP 1 Score: 300 bits (768), Expect = 1.040e-93 Identity = 140/253 (55.34%), Postives = 186/253 (73.52%), Query Frame = 2
Query: 209 AFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
A SP E+REFP+ E+ ++H+ + F+I LPS +H G++TASC++V+G G DG VRPYTPTT N T GHFDLVIK YP+G VS +M GLK GD + VKGPFPK +PN+K+ IGMIAGGTGITPM Q + ELL +D T TLLF N+TP+DI+LK+E+D LAA H F++VYIV P W G++G++ A I++++P PS D+M+FVCGPP ++ ++ G K +DK+QG + G LK GFT E VYKF
Sbjct: 41 ALSPKEWREFPVSEVHTLSHDTKMFKIQLPSSKHETGLETASCLLVQGTGLDGKPTVRPYTPTTLNKTLGHFDLVIKRYPEGNVSSYMHGLKPGDKLMVKGPFPKLKVTPNMKRNIGMIAGGTGITPMYQCILELLDASDDATNITLLFGNRTPSDILLKAELDALAATHPRFKLVYIVDKPDSSWKGLSGYITANEIQKYMPPPSADNMVFVCGPPPLMKSISGDKAKDKSQGPLEGALKACGFTEEMVYKF 293
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A836C9R3_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R3_9STRA) HSP 1 Score: 295 bits (756), Expect = 5.970e-92 Identity = 141/254 (55.51%), Postives = 182/254 (71.65%), Query Frame = 2
Query: 209 AFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAV-RPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
A P E+R+F ++EI ++H+ ++F + LPSEEH +GM TASC++V+G G DG+ V RPYTPT+ N TKGHF+LVIK Y GQVS +M GL VGD ++VKGPFPK PN+KK IG+IAGGTGITPM Q +QELL D T+ LL+ N+TP DI+LKSE+D LA ++ F VVY V DGWTG GH+ +++LP PS D M+FVCGPP ++ A+ G K DK+QG V GVLK+LG+T VYKF
Sbjct: 38 ALDPQEWRQFTVKEITPLSHDTKKFTVALPSEEHELGMVTASCLMVEGTGLDGTSQVARPYTPTSLNGTKGHFELVIKKYDKGQVSSYMHGLSVGDAIKVKGPFPKIKLDPNMKKRIGLIAGGTGITPMYQCIQELLEADGDATEMVLLYGNKTPKDILLKSELDALATKYPRFSVVYKVGEATDGWTGPVGHIGLEDCKQYLPPPSDDHMVFVCGPPPLMKAISGDKGPDKSQGAVDGVLKELGYTETQVYKF 291
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A6S9JGT0_HETAK (NADH-cytochrome b5 reductase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JGT0_HETAK) HSP 1 Score: 290 bits (743), Expect = 5.470e-90 Identity = 131/253 (51.78%), Postives = 188/253 (74.31%), Query Frame = 2
Query: 209 AFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
AFSP E+R F L ++ ++TH+ FR LP+ +H MGMKT+SCI+V+G+ + GS+ RPYTPT+TN+ KG FDL++K YP+G VS ++ GLK+GD + VKGP+ K +Y PN+ K IGMIAGG+GITPM+Q+ +E+L NP+D T+ +L+FAN T DIM K+ +D++AA++ NF V Y V GW G +A +IE+ +P P +M+FVCGP GM++A+CGPK ++ TQG++ G+LK+ GFT+E VYKF
Sbjct: 41 AFSPKEWRSFKLIQVRELTHDTSLFRFALPTTQHEMGMKTSSCIMVQGETRTGSMVARPYTPTSTNEQKGFFDLIVKNYPNGNVSSYIHGLKIGDNLNVKGPYMKLEYKPNMFKRIGMIAGGSGITPMIQLCREILSNPDDTTEISLIFANNTEGDIMQKAWLDQMAAQYHNFRVYYTVRDAPAGWRQGQGVCDAEMIEKKMPAPEAGTMVFVCGPDGMMDAVCGPKGKNYTQGELQGLLKERGFTAEQVYKF 293
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A7S2V2T1_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2T1_9STRA) HSP 1 Score: 285 bits (730), Expect = 4.990e-88 Identity = 136/254 (53.54%), Postives = 180/254 (70.87%), Query Frame = 2
Query: 209 AFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVA-VRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
AFS E+R FPL +I ++T N FR LPS+EH MG+ ASCI VK K+G +RPYTPTT ND KG+FDL++K YP+G+VS + LK+GD + VKGP+ K Y PN+ K IGMIAGGTGITPMLQ+L+ +L NP+DKT+ L+FAN T DIM K+ +D++A E+ NF V Y+V+ P W G G V+ +E +P P +M+FVCGPPGM+ ++ G K EDK+QG+V+GVLK+ G+TS VYKF
Sbjct: 42 AFSAKEWRSFPLVQIRELTPNTSLFRFNLPSQEHEMGLSVASCIEVKAPPKEGGKPMIRPYTPTTNNDVKGYFDLIVKDYPNGKVSSYFHNLKIGDSILVKGPYDKLQYKPNMFKRIGMIAGGTGITPMLQMLKVILSNPKDKTEVHLVFANNTEDDIMQKNVLDQMAVEYHNFHVHYVVAKPRPSWKGGVGFVDLDTVERKIPAPEEGTMVFVCGPPGMMESISGDKAEDKSQGEVSGVLKERGYTSGMVYKF 295
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A137P6R8_CONC2 (Ferredoxin reductase-like protein (Fragment) n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P6R8_CONC2) HSP 1 Score: 283 bits (723), Expect = 1.400e-87 Identity = 134/256 (52.34%), Postives = 186/256 (72.66%), Query Frame = 2
Query: 209 AFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEH-DNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGD--SMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
A P EF+ F L+EI+ ++H+ + FR LP + + +G+ ASC++ K GKDG +RPYTPT+ +G+FD +IK Y G +S H+ LKVGD +EVKGPFPK+ Y+ N EIG+IAGGTGITPMLQ+++++L NP+DKTK +FAN+T DI+LK E+DKLA +H D F++ YI+S+ GW+G GHVN +I+ L K S D S++FVCGPPGMV +CGPK +D +QG+V G+LKDLG++ +NVYKF
Sbjct: 1 ALDPKEFKAFKLKEIQSISHDTKLFRFELPPDSN-LGLPIASCVLTKAPGKDGKDVMRPYTPTSRETDRGYFDFIIKRYESGTMSKHIHSLKVGDTLEVKGPFPKYPYTANTHSEIGLIAGGTGITPMLQLIRKVLDNPQDKTKINFIFANRTTKDILLKDELDKLAKQHPDRFKIKYIISNKEPGWSGDVGHVNKDMIKNTL-KGSADKQSIVFVCGPPGMVELVCGPKAKDNSQGEVKGILKDLGYSGDNVYKF 254
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A9RJM3_PHYPA (NADH-cytochrome b5 reductase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RJM3_PHYPA) HSP 1 Score: 281 bits (719), Expect = 7.440e-87 Identity = 130/258 (50.39%), Postives = 189/258 (73.26%), Query Frame = 2
Query: 209 AFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVK---GKGKDGS--VAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
A +P EF +F + E+ + HN + +R S+E +G+ ASC++ K GK KDGS +RPYTP + D+KG+FDL++K+YP+G+++ H+ LK GD ++VKGP PK Y+PN+KK+IGMIAGGTGITPMLQV+ ++ NPED T+ +L+FAN TPADI+LKS++D L+ H NF+V Y+V SP + W G G++N ++ + LP PS D++I VCGPPG++N + G K D++QG++ G+LK+LG+TSE VYKF
Sbjct: 7 ALNPKEFVKFKVSEVRDVNHNTKLYRFTFDSQE-ALGLHVASCLITKAEIGKKKDGSPNYVIRPYTPISPPDSKGYFDLLVKIYPNGKMTQHLAQLKPGDTLDVKGPIPKLPYAPNMKKQIGMIAGGTGITPMLQVIDAIVSNPEDNTQVSLVFANTTPADILLKSKLDALSFAHPNFKVYYVVDSPTNDWKGGKGYINKDVLLKGLPSPSDDTLILVCGPPGLMNLISGDKAPDRSQGELVGLLKELGYTSEQVYKF 263
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A2K1KNZ2_PHYPA (FAD-binding FR-type domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KNZ2_PHYPA) HSP 1 Score: 283 bits (725), Expect = 1.340e-86 Identity = 134/274 (48.91%), Postives = 197/274 (71.90%), Query Frame = 2
Query: 161 TNPKMAETKDTKSPMGAFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVK---GKGKDGS--VAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
+ P +AE + K+ A +P EF +F + E+ + HN + +R S+E +G+ ASC++ K GK KDGS +RPYTP + D+KG+FDL++K+YP+G+++ H+ LK GD ++VKGP PK Y+PN+KK+IGMIAGGTGITPMLQV+ ++ NPED T+ +L+FAN TPADI+LKS++D L+ H NF+V Y+V SP + W G G++N ++ + LP PS D++I VCGPPG++N + G K D++QG++ G+LK+LG+TSE VYKF
Sbjct: 75 SEPALAEASEPKT---ALNPKEFVKFKVSEVRDVNHNTKLYRFTFDSQE-ALGLHVASCLITKAEIGKKKDGSPNYVIRPYTPISPPDSKGYFDLLVKIYPNGKMTQHLAQLKPGDTLDVKGPIPKLPYAPNMKKQIGMIAGGTGITPMLQVIDAIVSNPEDNTQVSLVFANTTPADILLKSKLDALSFAHPNFKVYYVVDSPTNDWKGGKGYINKDVLLKGLPSPSDDTLILVCGPPGLMNLISGDKAPDRSQGELVGLLKELGYTSEQVYKF 344
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A7S4CVQ4_9EUGL (NADH-cytochrome b5 reductase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CVQ4_9EUGL) HSP 1 Score: 276 bits (706), Expect = 2.200e-84 Identity = 134/255 (52.55%), Postives = 176/255 (69.02%), Query Frame = 2
Query: 206 GAFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVK-GKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
GAF+P EFR+F L E + ++H+ R FR LP++ MG+ TASCIV + G +G +RPYTPTT NDTKGHFDLVIK YPD +++GH+F LK GD +EVKGP K Y PN K IGMIAGGTGITPM QV QE+L NP+DKT+ L++ N+T DI+L+ E+D LA +H NF V Y + SP W G G V ++ H P +S ++VCGP M+ A+ G K +D +QG+V GVLK+LG+T + V+KF
Sbjct: 47 GAFNPKEFRKFKLLESQTISHDTRLFRFALPADTPEMGLPTASCIVTRYATGNEGEYVIRPYTPTTLNDTKGHFDLVIKKYPDAKMAGHIFSLKPGDELEVKGPIIKQRYVPNKYKHIGMIAGGTGITPMYQVAQEVLKNPDDKTEIDLIYGNKTEDDILLRKELDALAKKHPNFRVHYTLDSPGWMWRGDKGFVTPAMVSSHFPGAKSNSYVYVCGPMPMMKAVSGGKAKDYSQGEVDGVLKELGYTKDMVFKF 301
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A7S2SKL0_9STRA (NADH-cytochrome b5 reductase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKL0_9STRA) HSP 1 Score: 275 bits (703), Expect = 6.320e-84 Identity = 129/254 (50.79%), Postives = 177/254 (69.69%), Query Frame = 2
Query: 206 GAFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
G+FSPD FRE+P+ I +++N R FR+ LP+ + VMG+ ASCI V+ + + G+ VRPYTPTTTN T+G+FDLV+K YPDG +S H FGL VGD ++VKGPFPK Y N+ K +GM+AGGTGITPMLQVL+ L + ED T+ +L++ N +P DI+LK +D LA + F V Y+V P + W +G+V +IE LP SM+FVCGPPGM+ A+CG K +++QG ++G+L GF + VYKF
Sbjct: 50 GSFSPDVFREYPVMAIIPLSNNARLFRMKLPASKDVMGLSVASCIHVQAE-QGGAKTVRPYTPTTTNFTQGYFDLVVKRYPDGMMSSHFFGLNVGDKIQVKGPFPKIKYERNMAKRVGMVAGGTGITPMLQVLEHALADSEDNTEFSLIYCNISPEDILLKDRLDDLAERYHRFRVFYVVEKPEEDWEQGSGYVTLDMIERKLPAAEDGSMVFVCGPPGMMRAVCGEKRNEQSQGRLSGLLAKRGFRANAVYKF 302 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig687.27.2 >prot_P-littoralis_Contig687.27.2 ID=prot_P-littoralis_Contig687.27.2|Name=mRNA_P-littoralis_Contig687.27.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=266bp MAETKDTKSPMGAFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMback to top mRNA from alignment at P-littoralis_Contig687:83322..93852- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig687.27.2 ID=mRNA_P-littoralis_Contig687.27.2|Name=mRNA_P-littoralis_Contig687.27.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10531bp|location=Sequence derived from alignment at P-littoralis_Contig687:83322..93852- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig687:83322..93852- >mRNA_P-littoralis_Contig687.27.2 ID=mRNA_P-littoralis_Contig687.27.2|Name=mRNA_P-littoralis_Contig687.27.2|organism=Pylaiella littoralis U1_48|type=CDS|length=798bp|location=Sequence derived from alignment at P-littoralis_Contig687:83322..93852- (Pylaiella littoralis U1_48)back to top |