mRNA_P-littoralis_Contig687.27.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig687.27.2
Unique NamemRNA_P-littoralis_Contig687.27.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A6H5JG59_9PHAE (NADH-cytochrome b5 reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG59_9PHAE)

HSP 1 Score: 451 bits (1161), Expect = 1.870e-152
Identity = 222/265 (83.77%), Postives = 237/265 (89.43%), Query Frame = 2
Query:  173 MAETKDTKSPMGAFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
            MAE  D  S   AFSP EFR+FPLREIE MTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYP+G VS H+F LKVGD V VKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTK TLLFAN T ADIMLK+EIDKLAAEHDNF+VVY+V    +GWTG TGHVNA LIE HLPKPSGDS+IFVCGPPGM+NA+ GPKNEDK+QG++ GVLK LG+TS+ VYKF
Sbjct:   49 MAEATD--SSKTAFSPKEFRDFPLREIEDMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDTVAVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVYVVDKAEEGWTGATGHVNASLIETHLPKPSGDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKALGYTSDMVYKF 311          
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A835ZLM4_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLM4_9STRA)

HSP 1 Score: 300 bits (768), Expect = 1.040e-93
Identity = 140/253 (55.34%), Postives = 186/253 (73.52%), Query Frame = 2
Query:  209 AFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
            A SP E+REFP+ E+  ++H+ + F+I LPS +H  G++TASC++V+G G DG   VRPYTPTT N T GHFDLVIK YP+G VS +M GLK GD + VKGPFPK   +PN+K+ IGMIAGGTGITPM Q + ELL   +D T  TLLF N+TP+DI+LK+E+D LAA H  F++VYIV  P   W G++G++ A  I++++P PS D+M+FVCGPP ++ ++ G K +DK+QG + G LK  GFT E VYKF
Sbjct:   41 ALSPKEWREFPVSEVHTLSHDTKMFKIQLPSSKHETGLETASCLLVQGTGLDGKPTVRPYTPTTLNKTLGHFDLVIKRYPEGNVSSYMHGLKPGDKLMVKGPFPKLKVTPNMKRNIGMIAGGTGITPMYQCILELLDASDDATNITLLFGNRTPSDILLKAELDALAATHPRFKLVYIVDKPDSSWKGLSGYITANEIQKYMPPPSADNMVFVCGPPPLMKSISGDKAKDKSQGPLEGALKACGFTEEMVYKF 293          
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A836C9R3_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R3_9STRA)

HSP 1 Score: 295 bits (756), Expect = 5.970e-92
Identity = 141/254 (55.51%), Postives = 182/254 (71.65%), Query Frame = 2
Query:  209 AFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAV-RPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
            A  P E+R+F ++EI  ++H+ ++F + LPSEEH +GM TASC++V+G G DG+  V RPYTPT+ N TKGHF+LVIK Y  GQVS +M GL VGD ++VKGPFPK    PN+KK IG+IAGGTGITPM Q +QELL    D T+  LL+ N+TP DI+LKSE+D LA ++  F VVY V    DGWTG  GH+     +++LP PS D M+FVCGPP ++ A+ G K  DK+QG V GVLK+LG+T   VYKF
Sbjct:   38 ALDPQEWRQFTVKEITPLSHDTKKFTVALPSEEHELGMVTASCLMVEGTGLDGTSQVARPYTPTSLNGTKGHFELVIKKYDKGQVSSYMHGLSVGDAIKVKGPFPKIKLDPNMKKRIGLIAGGTGITPMYQCIQELLEADGDATEMVLLYGNKTPKDILLKSELDALATKYPRFSVVYKVGEATDGWTGPVGHIGLEDCKQYLPPPSDDHMVFVCGPPPLMKAISGDKGPDKSQGAVDGVLKELGYTETQVYKF 291          
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A6S9JGT0_HETAK (NADH-cytochrome b5 reductase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JGT0_HETAK)

HSP 1 Score: 290 bits (743), Expect = 5.470e-90
Identity = 131/253 (51.78%), Postives = 188/253 (74.31%), Query Frame = 2
Query:  209 AFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
            AFSP E+R F L ++ ++TH+   FR  LP+ +H MGMKT+SCI+V+G+ + GS+  RPYTPT+TN+ KG FDL++K YP+G VS ++ GLK+GD + VKGP+ K +Y PN+ K IGMIAGG+GITPM+Q+ +E+L NP+D T+ +L+FAN T  DIM K+ +D++AA++ NF V Y V     GW    G  +A +IE+ +P P   +M+FVCGP GM++A+CGPK ++ TQG++ G+LK+ GFT+E VYKF
Sbjct:   41 AFSPKEWRSFKLIQVRELTHDTSLFRFALPTTQHEMGMKTSSCIMVQGETRTGSMVARPYTPTSTNEQKGFFDLIVKNYPNGNVSSYIHGLKIGDNLNVKGPYMKLEYKPNMFKRIGMIAGGSGITPMIQLCREILSNPDDTTEISLIFANNTEGDIMQKAWLDQMAAQYHNFRVYYTVRDAPAGWRQGQGVCDAEMIEKKMPAPEAGTMVFVCGPDGMMDAVCGPKGKNYTQGELQGLLKERGFTAEQVYKF 293          
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A7S2V2T1_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2T1_9STRA)

HSP 1 Score: 285 bits (730), Expect = 4.990e-88
Identity = 136/254 (53.54%), Postives = 180/254 (70.87%), Query Frame = 2
Query:  209 AFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVA-VRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
            AFS  E+R FPL +I ++T N   FR  LPS+EH MG+  ASCI VK   K+G    +RPYTPTT ND KG+FDL++K YP+G+VS +   LK+GD + VKGP+ K  Y PN+ K IGMIAGGTGITPMLQ+L+ +L NP+DKT+  L+FAN T  DIM K+ +D++A E+ NF V Y+V+ P   W G  G V+   +E  +P P   +M+FVCGPPGM+ ++ G K EDK+QG+V+GVLK+ G+TS  VYKF
Sbjct:   42 AFSAKEWRSFPLVQIRELTPNTSLFRFNLPSQEHEMGLSVASCIEVKAPPKEGGKPMIRPYTPTTNNDVKGYFDLIVKDYPNGKVSSYFHNLKIGDSILVKGPYDKLQYKPNMFKRIGMIAGGTGITPMLQMLKVILSNPKDKTEVHLVFANNTEDDIMQKNVLDQMAVEYHNFHVHYVVAKPRPSWKGGVGFVDLDTVERKIPAPEEGTMVFVCGPPGMMESISGDKAEDKSQGEVSGVLKERGYTSGMVYKF 295          
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A137P6R8_CONC2 (Ferredoxin reductase-like protein (Fragment) n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P6R8_CONC2)

HSP 1 Score: 283 bits (723), Expect = 1.400e-87
Identity = 134/256 (52.34%), Postives = 186/256 (72.66%), Query Frame = 2
Query:  209 AFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEH-DNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGD--SMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
            A  P EF+ F L+EI+ ++H+ + FR  LP + + +G+  ASC++ K  GKDG   +RPYTPT+    +G+FD +IK Y  G +S H+  LKVGD +EVKGPFPK+ Y+ N   EIG+IAGGTGITPMLQ+++++L NP+DKTK   +FAN+T  DI+LK E+DKLA +H D F++ YI+S+   GW+G  GHVN  +I+  L K S D  S++FVCGPPGMV  +CGPK +D +QG+V G+LKDLG++ +NVYKF
Sbjct:    1 ALDPKEFKAFKLKEIQSISHDTKLFRFELPPDSN-LGLPIASCVLTKAPGKDGKDVMRPYTPTSRETDRGYFDFIIKRYESGTMSKHIHSLKVGDTLEVKGPFPKYPYTANTHSEIGLIAGGTGITPMLQLIRKVLDNPQDKTKINFIFANRTTKDILLKDELDKLAKQHPDRFKIKYIISNKEPGWSGDVGHVNKDMIKNTL-KGSADKQSIVFVCGPPGMVELVCGPKAKDNSQGEVKGILKDLGYSGDNVYKF 254          
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A9RJM3_PHYPA (NADH-cytochrome b5 reductase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RJM3_PHYPA)

HSP 1 Score: 281 bits (719), Expect = 7.440e-87
Identity = 130/258 (50.39%), Postives = 189/258 (73.26%), Query Frame = 2
Query:  209 AFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVK---GKGKDGS--VAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
            A +P EF +F + E+  + HN + +R    S+E  +G+  ASC++ K   GK KDGS    +RPYTP +  D+KG+FDL++K+YP+G+++ H+  LK GD ++VKGP PK  Y+PN+KK+IGMIAGGTGITPMLQV+  ++ NPED T+ +L+FAN TPADI+LKS++D L+  H NF+V Y+V SP + W G  G++N  ++ + LP PS D++I VCGPPG++N + G K  D++QG++ G+LK+LG+TSE VYKF
Sbjct:    7 ALNPKEFVKFKVSEVRDVNHNTKLYRFTFDSQE-ALGLHVASCLITKAEIGKKKDGSPNYVIRPYTPISPPDSKGYFDLLVKIYPNGKMTQHLAQLKPGDTLDVKGPIPKLPYAPNMKKQIGMIAGGTGITPMLQVIDAIVSNPEDNTQVSLVFANTTPADILLKSKLDALSFAHPNFKVYYVVDSPTNDWKGGKGYINKDVLLKGLPSPSDDTLILVCGPPGLMNLISGDKAPDRSQGELVGLLKELGYTSEQVYKF 263          
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A2K1KNZ2_PHYPA (FAD-binding FR-type domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KNZ2_PHYPA)

HSP 1 Score: 283 bits (725), Expect = 1.340e-86
Identity = 134/274 (48.91%), Postives = 197/274 (71.90%), Query Frame = 2
Query:  161 TNPKMAETKDTKSPMGAFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVK---GKGKDGS--VAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
            + P +AE  + K+   A +P EF +F + E+  + HN + +R    S+E  +G+  ASC++ K   GK KDGS    +RPYTP +  D+KG+FDL++K+YP+G+++ H+  LK GD ++VKGP PK  Y+PN+KK+IGMIAGGTGITPMLQV+  ++ NPED T+ +L+FAN TPADI+LKS++D L+  H NF+V Y+V SP + W G  G++N  ++ + LP PS D++I VCGPPG++N + G K  D++QG++ G+LK+LG+TSE VYKF
Sbjct:   75 SEPALAEASEPKT---ALNPKEFVKFKVSEVRDVNHNTKLYRFTFDSQE-ALGLHVASCLITKAEIGKKKDGSPNYVIRPYTPISPPDSKGYFDLLVKIYPNGKMTQHLAQLKPGDTLDVKGPIPKLPYAPNMKKQIGMIAGGTGITPMLQVIDAIVSNPEDNTQVSLVFANTTPADILLKSKLDALSFAHPNFKVYYVVDSPTNDWKGGKGYINKDVLLKGLPSPSDDTLILVCGPPGLMNLISGDKAPDRSQGELVGLLKELGYTSEQVYKF 344          
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A7S4CVQ4_9EUGL (NADH-cytochrome b5 reductase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CVQ4_9EUGL)

HSP 1 Score: 276 bits (706), Expect = 2.200e-84
Identity = 134/255 (52.55%), Postives = 176/255 (69.02%), Query Frame = 2
Query:  206 GAFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVK-GKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
            GAF+P EFR+F L E + ++H+ R FR  LP++   MG+ TASCIV +   G +G   +RPYTPTT NDTKGHFDLVIK YPD +++GH+F LK GD +EVKGP  K  Y PN  K IGMIAGGTGITPM QV QE+L NP+DKT+  L++ N+T  DI+L+ E+D LA +H NF V Y + SP   W G  G V   ++  H P    +S ++VCGP  M+ A+ G K +D +QG+V GVLK+LG+T + V+KF
Sbjct:   47 GAFNPKEFRKFKLLESQTISHDTRLFRFALPADTPEMGLPTASCIVTRYATGNEGEYVIRPYTPTTLNDTKGHFDLVIKKYPDAKMAGHIFSLKPGDELEVKGPIIKQRYVPNKYKHIGMIAGGTGITPMYQVAQEVLKNPDDKTEIDLIYGNKTEDDILLRKELDALAKKHPNFRVHYTLDSPGWMWRGDKGFVTPAMVSSHFPGAKSNSYVYVCGPMPMMKAVSGGKAKDYSQGEVDGVLKELGYTKDMVFKF 301          
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Match: A0A7S2SKL0_9STRA (NADH-cytochrome b5 reductase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKL0_9STRA)

HSP 1 Score: 275 bits (703), Expect = 6.320e-84
Identity = 129/254 (50.79%), Postives = 177/254 (69.69%), Query Frame = 2
Query:  206 GAFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHMFGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTGVTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTGVLKDLGFTSENVYKF 967
            G+FSPD FRE+P+  I  +++N R FR+ LP+ + VMG+  ASCI V+ + + G+  VRPYTPTTTN T+G+FDLV+K YPDG +S H FGL VGD ++VKGPFPK  Y  N+ K +GM+AGGTGITPMLQVL+  L + ED T+ +L++ N +P DI+LK  +D LA  +  F V Y+V  P + W   +G+V   +IE  LP     SM+FVCGPPGM+ A+CG K  +++QG ++G+L   GF +  VYKF
Sbjct:   50 GSFSPDVFREYPVMAIIPLSNNARLFRMKLPASKDVMGLSVASCIHVQAE-QGGAKTVRPYTPTTTNFTQGYFDLVVKRYPDGMMSSHFFGLNVGDKIQVKGPFPKIKYERNMAKRVGMVAGGTGITPMLQVLEHALADSEDNTEFSLIYCNISPEDILLKDRLDDLAERYHRFRVFYVVEKPEEDWEQGSGYVTLDMIERKLPAAEDGSMVFVCGPPGMMRAVCGEKRNEQSQGRLSGLLAKRGFRANAVYKF 302          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig687.27.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG59_9PHAE1.870e-15283.77NADH-cytochrome b5 reductase n=1 Tax=Ectocarpus sp... [more]
A0A835ZLM4_9STRA1.040e-9355.34NADH-cytochrome b5 reductase n=1 Tax=Tribonema min... [more]
A0A836C9R3_9STRA5.970e-9255.51NADH-cytochrome b5 reductase n=1 Tax=Tribonema min... [more]
A0A6S9JGT0_HETAK5.470e-9051.78NADH-cytochrome b5 reductase n=1 Tax=Heterosigma a... [more]
A0A7S2V2T1_9STRA4.990e-8853.54NADH-cytochrome b5 reductase n=1 Tax=Fibrocapsa ja... [more]
A0A137P6R8_CONC21.400e-8752.34Ferredoxin reductase-like protein (Fragment) n=1 T... [more]
A9RJM3_PHYPA7.440e-8750.39NADH-cytochrome b5 reductase n=1 Tax=Physcomitrium... [more]
A0A2K1KNZ2_PHYPA1.340e-8648.91FAD-binding FR-type domain-containing protein n=1 ... [more]
A0A7S4CVQ4_9EUGL2.200e-8452.55NADH-cytochrome b5 reductase n=1 Tax=Eutreptiella ... [more]
A0A7S2SKL0_9STRA6.320e-8450.79NADH-cytochrome b5 reductase n=2 Tax=Rhizochromuli... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig687contigP-littoralis_Contig687:83322..93852 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog115417.EPrPW00000019771
PFAMsFAD_binding_6,NAD_binding_1
Model size1955
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons8
Evalue8.29e-89
EggNOG OGsCOG0543@1|root,KOG0534@2759|Eukaryota,1ME5I@121069|Pythiales
DescriptionNADH-cytochrome b5 reductase
Cds size798
COG categoryCH
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig687.27.2prot_P-littoralis_Contig687.27.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig687 84307..92833 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791424.9204397-UTR-P-littoralis_Contig687:83321..843061680791424.9204397-UTR-P-littoralis_Contig687:83321..84306Pylaiella littoralis U1_48UTRP-littoralis_Contig687 83322..84306 -
1680791425.0383372-UTR-P-littoralis_Contig687:92833..929211680791425.0383372-UTR-P-littoralis_Contig687:92833..92921Pylaiella littoralis U1_48UTRP-littoralis_Contig687 92834..92921 -
1680791425.0508037-UTR-P-littoralis_Contig687:93768..938521680791425.0508037-UTR-P-littoralis_Contig687:93768..93852Pylaiella littoralis U1_48UTRP-littoralis_Contig687 93769..93852 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791424.9433553-CDS-P-littoralis_Contig687:84306..844051680791424.9433553-CDS-P-littoralis_Contig687:84306..84405Pylaiella littoralis U1_48CDSP-littoralis_Contig687 84307..84405 -
1680791424.9634528-CDS-P-littoralis_Contig687:84947..850761680791424.9634528-CDS-P-littoralis_Contig687:84947..85076Pylaiella littoralis U1_48CDSP-littoralis_Contig687 84948..85076 -
1680791424.9755297-CDS-P-littoralis_Contig687:85777..859411680791424.9755297-CDS-P-littoralis_Contig687:85777..85941Pylaiella littoralis U1_48CDSP-littoralis_Contig687 85778..85941 -
1680791424.988898-CDS-P-littoralis_Contig687:86783..868591680791424.988898-CDS-P-littoralis_Contig687:86783..86859Pylaiella littoralis U1_48CDSP-littoralis_Contig687 86784..86859 -
1680791425.001772-CDS-P-littoralis_Contig687:87260..873471680791425.001772-CDS-P-littoralis_Contig687:87260..87347Pylaiella littoralis U1_48CDSP-littoralis_Contig687 87261..87347 -
1680791425.0120926-CDS-P-littoralis_Contig687:87852..880441680791425.0120926-CDS-P-littoralis_Contig687:87852..88044Pylaiella littoralis U1_48CDSP-littoralis_Contig687 87853..88044 -
1680791425.0266473-CDS-P-littoralis_Contig687:92782..928331680791425.0266473-CDS-P-littoralis_Contig687:92782..92833Pylaiella littoralis U1_48CDSP-littoralis_Contig687 92783..92833 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig687.27.2

>prot_P-littoralis_Contig687.27.2 ID=prot_P-littoralis_Contig687.27.2|Name=mRNA_P-littoralis_Contig687.27.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=266bp
MAETKDTKSPMGAFSPDEFREFPLREIEQMTHNVRRFRIGLPSEEHVMGM
KTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPDGQVSGHM
FGLKVGDMVEVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLN
PEDKTKATLLFANQTPADIMLKSEIDKLAAEHDNFEVVYIVSSPADGWTG
VTGHVNAPLIEEHLPKPSGDSMIFVCGPPGMVNAMCGPKNEDKTQGDVTG
VLKDLGFTSENVYKF*
back to top

mRNA from alignment at P-littoralis_Contig687:83322..93852-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig687.27.2 ID=mRNA_P-littoralis_Contig687.27.2|Name=mRNA_P-littoralis_Contig687.27.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10531bp|location=Sequence derived from alignment at P-littoralis_Contig687:83322..93852- (Pylaiella littoralis U1_48)
CGTTGAAGGAGCCCACTACCAGTTCGCCTGCACGTGCCTTTGTTCTCATC TCTGCCCATCTCTTTCGGTCAGCCTTGCGTACAGGTCGGTTTCGCTTCCG TTTCTTTCGAGCTGCAATTTTCCTCCGTTCCATCCATCTTTGCCAAGCTC GGTACTCGTCTACGTTCAGGCGGGCTGGGGACGACACTCCCGGCCAGCGT CGACGTGAAGGTCGACGAGGGTGCTTACTAACGTGGTGCCTCCTAGTCTC TCTGCTCCTCAGGCTACGAGTTCCACGATTTCCGCGGTGATGTGTCGACA CAGCTGCCGCAGACAGTTTGACTGTCGCGGAGACCAGACCATAGTTGGTC CGGACTGCTGTAGTGCCATTCGTCACCTCCATCACCTACCCAGCCTCGGC GTGCGCCGAGCAGGGTCTGACCACACCACCCCCACACTACCCTGTCTACT TTGATAGAGCCCGGTGTGTCCAAGAGGGACCCACTAGGTTGGGTGACCCC GGCCGGGGAGCAGCCGAGGGAGGAAGTTTATGCAATGGCTCGTTTGTGGA ACCGGCCTTATGTTACTCGTGACATGATTTTGTGCTTGCAGCAGTATACA TACGGTGTTGTTTGCTGGGTCATTTCAGTCGGGGCCCTCTCGGTCGATTG GCGGCCGCGGGGTATTGAGCTGCTATCGCGGGACATTACCAGACTGGAGC GCTTGGGCGCCCGCCCCTTCGTTGCGTGATGTGCATGTGTACGCCGTATG CCTTGATGACGGGGTGCCGCCCCTGGAGGATCTCACTGACTTTATAAATA ATTCTTTTTTTTTCTCCCCATTCTCGCCCCATTATTATTTTTTATTTGCT CATTCCTGAATCTTTAGTTCTGCACTACTTATACGGCGGTGCCAATGTTG TTCGACCTTCTTCACGTCACGCTATTGGCAGATGCTAGGAGGAGCCTATT CTGTGAGATTCTCAGAGTCCTTTTTTACCTCCACAACAACGAGAACAGAG TCGAGCTACGAACCCGAAGATGGCAGAGACCAAGGATACTAAGTCACCCA TGGGCGCGTTCAGCCCTGATGTGAGTATAGCGGTAGTGTGCGGTGTGTCT CTCCTCTTGATCCTTGATTGTTGATACCAACATCAACATCAATAGTGCTC TCCGAATTGCCGCTTGTGCTATCTTCTGTTGATCGAATCGAAAAGAACGT CATTCTGCCGCTCTATTTACCAATACAGCAAGCAAGCCAGTACAACAAGA CAGATCGATATTACCGGTATGCCTCCAAGATCTGAAGATCATCAAGCCTC TGAATCAGACCCCGGCCCCTCCGCCTGCCCTCGTCACAGGCGACTGTGAA GTGGTGGTAGCATCGTATCATACAGTACGACTTTCTACTGCAGAAAGAAG CCTACACACTGACTGGTACTTTTAGCTAAAACCTGGGTGTGAGGAGGAGG GAAGGAATTCGTTTGATGACTAAAAAAATCCACTACAGGTATCTACACGA TGACTTGACATCAGTCACACAACAACCATCTCCCATAAAGCACCAGAAGT ACGTACACAGAGTGCGCAATCAATTACGGCACGCGTATACTTGTTTGATG AGTTTATGCCTTGAGGGAAGATCATGGCAGTATCATATTTGCATCAGCAG TGTTCAAGCACAACAAACAGCCCTCCACCAGCACTCACACTCTCATTCAC CTTCACCTTTGTCAGCAGTTCAAACATCAGACTACTGTCTTCACAGGCAC AGCAGTGATTTACTAGAGACGTGAAGACAGAGACAGCGATCCGCGTGGTT TTGCATCATCAATCAATCACGTACAGCGTATTTTTTTATTTTTCTTGCCA AGACATCACTGTTGTTGTCGTTGTTGTTGATTCTCACATTAGCTCACTAC CGCCGCAGTCTACCGGTAGCCCGTGGTCACAAACCAGGCACATATCGTGC TACTTGTAGGAGGAAAAACAGAGAAAGAAAAAATTGACTAGCATCACCCA GTCAAATCAAATACTGTATGGTACCGTTGGGGTACCATCTGTCGTGGCCA AAGTACCAAACAAAATACAGAAATAAATAAAAGGCTCGAAAGAAAAAACA AAAATTGGAAACAGTACTGTTTACCCCAAACAACAAATAATCAAGACAAA CCTCAACTATATCCATATTCGAAGTACTTCGTACATTGAACCAGGGCCCA GGGCCATGACAGACCAAGGCGAAGGCAAACCAGGGCGATGGTCCAGTAAC TGTAAGATCAACAAACGAAAGACAAAAAAATAAGATAAAAAAGAAGAAGA TACAGGGAGGGCACAAAGAATGAGGGAGTGCACTCGTACACAAACACAAC AGACAGGCCGCCACACAAAGAGGAAGCAGGGGGACGAAAAGGGAAAAGAA ATAAAGAGACAAAGAGGAATAAAATACATACATGGAGAGTGCAGAGGGAA GATCGGAAGTACCGGAAGTCGGGGAGGGGTGATAAAAATAAAATAAAAGG CATGCAATCAATCGCAAACATGTCTTGCCACGAGGTCTGCCTGTTCACGC TTGCTCTCCTCAGTCGCACTCATGCCTCCTGCTACTGGCACCACCGTACC CAGTCGTTTCTGCCCCACATCTTTGGCAGCAGCTACACCACCATTCCGCC CTACAGGTCTTCCACTCCGGCCACCCCGTAGCTTGGCTTTGGGCTGCTTC TTGTTGTGCTGTGCAACTCCAACCCCACTACCCCGCTGCCCTTGTGCCCC CCCGTACTCCTCCTCTCGTTTATCCCCGCCATCCGTTCTCCCTCCATTGG CCAAGGCCTGTCCCTCAGCCGCGTCCCTCAGCCGCGTCCCTCTCTGATAA GTCTCCCTCTTTCTTGAGCCAGTCGTCCGTGAACCGCCGCGCACCCTCGT CGATCCTGTCGTACCACTCGTCAGCTCTCTTGGCACTTGCCTCCCACCCC TCTTTTTTGTCGACCACGATGTCGAACGCTTCGAGGTCCTCCTGCATTCG CCTCAGCCAGTCAACCTCTTGCCCCCCCAGATACCTCGCTCCCCCCTGCA ATTCTCCCAAAAGAGCAATTTTCGGGAGTCTGTCGTCTTCCATGCGCGTT GTTCGCCTCTCCCTAGACGAGGATCCAGCAAGATTAGCAACGAACACAGC GTTTTTTTTTCTTCTTACCAAGACATAATTTGCGAGTTTCTACCAGTCTA TCTGTGTGTGCTGTTCCCTCACTTTCGCGTCACATCCTGGCCCACACACA TACACGCGTTTGCCGATTTGTTGGAACCGGGCCTGCATAAACCAATCTAG AACAGCAGCGAGTCGAGGGGAAGGGTGCTTTAGCGGTCCCGGGATGTTGT GATGTCGCACGATATAGCGGGACATGGTCGTTGCAATGCACCGAACCCGG TCACGATGTACGCACGTACGATATGTAAAACAAAGTTACGTTTATTTTTT TGTTTCGAAGAAGGGCACGATCGTTCAACAACTGCTGTGGGTCTTCCGTT TACCTCCACATTTGCCGGCACTGGCCCATAGGAGGTACGAAGGACGAAGT AGTAGTGTTGCATTGATCGGTGTTACAGGTATTATTGCTGTCTGAAGTCA AACAAAAATCAAGTAACGAATTGCCAAAAAAATAAAAATAAAAAGTACCC TCCTACATGTGGACAGCTTGCAATGCTAGCTCAGGTGACGTTTGATCCCT TGCACATGGAAGTTGCTAATCTACTCAGCTCAATCTACTCTTCTGGACCC TCGTCTAGGGAGAGGTGGACACATTTGACGTGTTTGTACTAAAAAAAGGG GGCAGACGCCAAAAAGCGGTATACCGCCTGGTTTCCGCCCGGCAAAGCGG TACACCAAAATACACCTGGGCATTTGAGCCCCGTTCGCGTCGCTGATTGG CCGATTAAGCCTCGTAACGCTTTTTGGCACCACCAGTCGGCGGTACATCA CATCTCGGCTTCTCAGGTCGGCTGTAACCGCTTTTTGGCGCGACCCGTAC CGCTTTCTGGCGGGATATTCCCCAGGCCATTCGCCCAACAGCCTTTGAAA CTTCCAAATCAGGCATCAACCAAGGAAGCCACGTCACCTAGTTTCAGAGC CCCCCGGCCCTTTGTCGGCGAATAACCTCTCGACACGTTCTCCGCGCATT TTCTCTGCACCCGACCCCTTCGGGACCTTACAGCTTGCCAGCCCGCCAGC TTGTTGCTGAAAGCTGAGGCGTGCTTCTGCGTTACTCGCCAGCTTGTTGC TGAAAGCTGAGGCGTGCTTCTGCGTTACTCTGCAAGAAGCTGGCAAGAAG GCCAGAACAAATACCACTGCTGCTGCTGCTGTAAAACACAAATACACCCA CACGGTGCTGCCCATTACCAGAACAAAAGACCGTCCACGGGGAAAACTCG CTCCCCCGCAAACAAACACACACATGTATACAAACACGAACGATGACATG CACCTGATTTGGCAGGCTCGGATGCATGTATATGTATGATATTCCCTGCT TTGCGTACTTGATTAGTAGGCCCGGATATACTGCAAGTTGTTTTTGTTGC CAAAAACGGCAACGGTTATTTTTCGGAGGCTCACACGGCAGACGGCAGTG TGTGTGTTTGTGCCGGGGGTGTGAGTCGCGTTCTCACATGGTCTGCTACT TTTGTTCTGGTTTTACAGCAGCAGCAGTGGTTGTTCTGGTCTTCCTGCCA GCTTTCTTGCAGAGCACCGGGCAGAAGCACGCGTCAGCTTGCAGCGTGCT GTATGGTCCCGAAGGGGTCGGGTGCAGAGAAAATGCGCGGAGAACGCGCC GAGAGGTTATTCGCCGACAAAGGGCCGGGGGGCTCTGAAACTAAGTGACG TGGCTTCCTTGGTTGATGCCTGATTTGGAAGTTTCAAAGGCTGTTGGGCG AATGGCCTGGGGGGGGGATACCCCGCCAGAAAGCGGTGACAGCCGACTTG AGAAGCCCAGATGTGATATACCGCCGACTGGTGGTGCCAAAAGCGTTACG AGGCTTAATCGGCCAATCAGAGACGCGAATGGGGCTCAAATGCCCAGGTG TATTTTGGTGTACCGCTTTGTGGCGCGGAAACCAGGCGGTATACCGCTTT TTGGCGTCTACCCAAAAAAAAAGGTAAAGCTGACACAAAATACCTGCTGA AAGATTTGAATCTTTCACAAGTAGTTCCGTGTCAGCCTGGGGCATAGTAT TGCGTACTTGTCGCTTTTTTTTTATTCGAGAGTTCAACAAGATGAAAAGA TCTCGGCACCCTGGGAGATGCCGCGATGTATCGTACGAAGTACATACATA AGATACAGATGGCGCCACCAGTTGCGAGCTTGGCAGTAAAGAAGTTGAGC CGCTAAGGAAAAAATAAAGACACGCACACACACACACGCGCGAACGAACC TCCAGAGGACAAAGTGTGACGCCTGGTTGAGCATCCGAAGCTAAAACCTA CAGTCTCTCGATGATAGCCCACACATGAAAACAAGAACCCGAGCCTCGCG CCAAACAAGATGTTCAAAACTGTGCCACTCTCTGTAGATGCGTACTAGGG GGTTTCAGAGATCACTAGTCGCTCTCACACCTTGTTGTGTTCGCGGCTGC ATGTTTGTTCTAGATCCCATCCTCCTCGTGCAATATGAAACGTGTTTTGT TGTGCGAGTATTCTGATGCGTAGGTGCAAAAATAAGACGTTTGTCAACGT CACAAGATGCCAAACTTTTCCGGCTCAACAAGCCAGTGTGCTTTTTTTTG TCGTATTTCACATGCATTGAGCAATTTCACCGCACCACACCAATGAACGC CTCCACAGGAGTTCCGCGAGTTCCCCTTGCGAGAGATCGAGCAAATGACG CACAACGTCAGGCGTTTCCGCATCGGACTGCCCTCCGAGGAGCACGTGAT GGGCATGAAAACGGCGTCTTGCATCGTCGTCAAGGGGAAGGGGAAGGACG GGAGCGTGGCGGTGCGGCCGTACACCCCGACCACCACCAACGACACCAAG GTGCGCGTGTGTGTTTGTATTACGTGGTTCACCCGGCGCTGCGCATTGCC TTCGGTGCCCAGTCGTCATGCTCTTGTCTTTTGTCATGTTCGCGTCATGC CCTGTATCATATGCCTTCGTGGTACGTCCGTTGCCGCCATGCGTGCTGGC CAGAGGCCACAACAGTAAGCAGCACGAAGGGTGAACACACACACTGCACT AACTATTGCGCGGTCACAGTCGGAAGATTCTACGGAAGATGCGGTTGATT GCCCTTTCAGCGTTAAATTGCGGTTTTGTTTCCTGCTTTCATGGTCGTCC GAAATGTGCCGGTATTTGCGAATTTGCCTGCCTTCTCCGCAGCAACGACA AGCGGGCAAAACAAAAGAATAATGCTCTCCGTCGCTGTTGTCGTACTCTG GGACGCCTACAAGGACCCTCTCGTGCGCCCCCGCCCCCCCCCCCCACGGC GCTCTCATCGTCGATCCCGCTCTTACTTCGTACTATTTTTGTTCGTTGCG AGCAGGGCCACTTTGACCTGGTGATCAAGGTTTACCCCGACGGGCAAGTT TCCGGTCACATGTTCGGCCTCAAGGTTGGCGACATGGTCGAGGTGCGTGC GTGTGTGTGTGTGTGTTGTTTTCGCTATTTCTCGAGTGATCCCATGTCAA ACATCTAGCCTGCGGTCGCAAACTAGGCACAAAGAAAACAATTATGACAG CATATGATATGTTGTGTGCGGTCTCTGTCCCCGCTCGTCAAGCATGTAGG GAAAAACGTGCCATTCTCCGGGTTATCCGCATAAGCATTTGCTGGACTTT CGTTTGCTTTTCTCGCTGGCCGACCCCTTCTAGGGCGGCGAGTGCCCGTC CCTCTTCCCCCTTATCTATGTCGATGCGCGCCCCCTCTCTGTTTCGTTAG TTCTTGTGGTTCCTCGGTTTGCCCCCCCCTCTCTCTCTATTTCTTGCGTT GTCACGGCACCGGCGACGGTCGCCTGCCGGACGGGCTGTTCAGGTGAAGG GACCGTTCCCCAAGTTCGACTACTCGCCGAACGTGAAGAAGGAGATCGGA ATGATCGCCGGCGGCACCGGTGCGTTCTTGCTCGTGTGTACGTAGCACTC GAACGCCTGACACATACACACATAGCGGTTGCACGCGCGTACCCTGTACG CCCTCGTTCATACGATACGCGATCACGAGGTCTCTGTGTATGCGGACTCG GGAGTGTCGGTGCGTTCTTGCTCGTGTGTACGTAGCACTCGAACGCCTGA CACATACACACATAGCGGTTGCACGCGCTTACCCTGTACGTCCTCGTTAA TACGATACGCGATCATGAGGTCTCTGTGTGTGTGATGCGGACCCGAGAGT GTCTCCTAGTGATTGATGGACACCCTCCCCCGTCCAAAAACAACCCACAC GCAAAGATGGGCAGTTTTGCCCGTAGGGCTCGCTTTACGCCGGGCAGTGG TGCGAGTATCGTACGCTCGACGAGAACAGGGGGAGTGTTGGCGTTTTTTA TGGCACCTGGTATGGCTTTACGAGCTATCGTGTACAGCAGTGCCGGCCCA ATCATAAGAAACAGCTCATTTTGAGCAAGGGAGCAAGACTCATAACCTGT TTGACGTAGCCCCCGCCGTTGAGCGCAGGCTACGAAACAAGGACGAGGCG TGCGGCGACGCTGGCCGCTGAGCCCAATTTTTCCTGGGCCGAATGCCTTA CTTCTTTGAATCAAAATTAAGGCTGGGATTACCACCGAGGCATTTCTGAT GTTACTATCATATGCTGGCACTCTGTATTCGCCAAGTCTGTCTGTCGGGC GGCCTCGTTCCTATCCTATCTGCGGCGTCTTATCCTCTCGCCACGCCCCC CTCGCCCACACGCACCCGTCGCGTCACACCGTCCACGACGACACGTATGT TACACGATCAGGCATCACGCCGATGCTTCAGGTGCTGCAGGAGCTCCTGC TCAACCCGGAAGACAAGACGAAGGCGACCCTCCTCTTCGCCAACCAGACC CCGGCAGACATCATGCTCAAGTCGGAGATCGACAAGCTCGCCGCCGAGCA CGACAACTTTGAGGTCGTCTACATCGTGAGTACCGGCAGTGGTCGAGCAC CCCGCCATGCACTACTTGTTGTCGGTGGTCTGCCGCGCGCCAGGTCTGAC CCATCCCTTCTTTGTGTCCTGTTGTTGTTTCGCCGTCAATGGTACTGCAA CCTGCCCCCCAGATTTAGATATAATCCCTTGCCGTTTGAGTGCGTCCGTC CGCGGACGCCAAAAAACAGGAAGGAGTGAGTGCTGGGCGCGTTTGTTCGC AAACCTTCCCGCTGTTAGGGCTTCACCGGAGTCTCGAGGACTGCTTGGTA GCTTTGTTCTTCGTGCTGTTTTTCTGTTCTTTACCCGCGTCGAGAAACAA AATACGGCGAAGGGGTTTCCAACGTGATCTTTTTCGCACACCTTTCGGGG CGTTTTGCCTCCCTTTCCCGTTTCAGGTTGTGATGGTGTGGCGATTTGAC CACTGTGTTGTCTCCTTCAACTATCCCCACCCCCTCCCCCCCCCATCGCA CAAACATCAGCAGTTTATACTCTGTCGCCGTCGGAATCGGGGAACCTTGG GTTGTCGAGAACCATGCAGTCAATCAGTCGAGAGACCCTTTCTTGTTGTA TCTCTTGAAATACTAGACAACTTGCAGAGGACGTGCAAGAATCAGTGAAA ATCGTATTGAAGCCATAGTATATATTACATGTATCACAGATCACCATTCA ACCGCGGCGGGTATTTCATGCCGCAGGTGAGCAGCCCCGCAGACGGGTGG ACGGGTGTAACGGGGCACGTGAACGCCCCGCTGATCGAGGAACACCTCCC TAAGCCTTCCGGAGATTCTATGATCTTTGTGTGCGGACCGCCGGGAATGG TGAACGTGAGTGGCTCCTGAATGTAAACGGGAGCTGATGGTCCCACAGAA AGAGGCTGTGACGTGACATGCATGTGATGTGTGTGTGCCTCTGCTGCACG TATTTTAACGTGACGTTCGTTTTCGTCTCTCAACATGAAGAAGCTCGAGA GGTCAACATGGTGCCGTTTTCTTTTCATTTTTGTTAAAAATCTGCAATGT TGTGTCTGCTGCACAAACGTCACATTCTGCACGCGTCACGTCTAACTTTG TTGTCTCCTTGAGGCCCGCTGGAGTAAAAAACGGTCCCTCACCGCTCCAT AATAGAGGAAATTGTCGGGCATGGTTCGGGAAGGATTGAAGCACCGTACG ACAGCAAAGCAGCAGTCGACGCCTCGAAAGTCGACGGTGGCGCCAAACTT ACGATGCGGGCTGCACCGGTCGGAAGAGCAAAGGTCACACTATGATATAT GCATGATATTTTTCCTCGTGTCTATTGCTAAAAACTACCACCCGACCACA GCCCACAAGCTCCGCCGTGATCAAACCTCGATTGCAAATCCGTGTAGGCC ATGTGCGGGCCGAAGAACGAGGACAAGACTCAGGGAGACGTAACCGGAGT GTTGAAGGACCTGGGCTTCACCTCCGAGAACGTGTACAAGTTTTGAGCGC TGGAGCAGAACCTGCTCCAAACGGCGGCACCCCTTGCAACCGCGAAGACC CTTCGTGCGTATCGTCTCTTCAGTCAGCACGAGAAACAGATCAACGAGAG GGCCGCTCAATTTTGCCGTAGATGTGTGAAAGTGAAATCACCATCGCGGT TTTTTCTCCCACTTGTGTTGCAGTAAAACCTAAAAAGAAGGGCCAGTGGA GGGCCGCCTGTACGAAGAACAGGATCGGACGCGAGACAGCCAGGATGGAA AGCAGCGCAAGCTGTCGCCAAGACCATGATGCTGTTGGAACACGGCATTT CTTTTCCAGCAGGAAACGTGTGATGCGGCTTCATTAGAAGGTTGCCTGGT GCGCGCTTCCCTAGCAGCAGAAACCCTCGTGTCTCTGCAATTCTGTGGAA TGCACTGATTGGCGACACGAGATACACACGCACTAAGTATTTTATGACAA TTTTGTTTTTCTGCACATAGCTTCTTCGCTGAGTACCCTGTTTCTCCGAC TCGAAAACATTTTTATTCTGGGGGTGGCCAACCGCTCAAAATCTTGGAAA TTTTCTGGAAATTTTGGCACGCCACGAGGACAATCTCGGGCGCATCCTTC AAGTAGCTAGAAGAGGGGGGGGGCGGGGGGGTCTCGTTGTTGTAGTGCTG TGAATCTCTCCCGAGGTGCCTTTTCCTGCACTCGTCCTCATATTATGTCA GCGCTCAACAAGACATGGCAGAGGATGATCGGGGAGGACGCCGTGTGTAA AAATCGAAAACTGTGTACCCGGTATCTGTGTATCTATTTTGGGAAGCACG CTCTGTGGACGCTTTGCGGACGCATGTATTGTGCCGTTAGAGCCGAAAAT ACCATCACGGAGCCACGTGACACCAGAGAAGGCTCCCGCCCAGCGTTGCC TCCCAAGCACAAACTCTGCGGACGAGAAACCTGTGAGAATGAAGCGCTCG GACTCGTGAAAATAAAAGTCCGGGGTTAACA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig687:83322..93852-

>mRNA_P-littoralis_Contig687.27.2 ID=mRNA_P-littoralis_Contig687.27.2|Name=mRNA_P-littoralis_Contig687.27.2|organism=Pylaiella littoralis U1_48|type=CDS|length=798bp|location=Sequence derived from alignment at P-littoralis_Contig687:83322..93852- (Pylaiella littoralis U1_48)
ATGGCAGAGACCAAGGATACTAAGTCACCCATGGGCGCGTTCAGCCCTGA
TGAGTTCCGCGAGTTCCCCTTGCGAGAGATCGAGCAAATGACGCACAACG
TCAGGCGTTTCCGCATCGGACTGCCCTCCGAGGAGCACGTGATGGGCATG
AAAACGGCGTCTTGCATCGTCGTCAAGGGGAAGGGGAAGGACGGGAGCGT
GGCGGTGCGGCCGTACACCCCGACCACCACCAACGACACCAAGGGCCACT
TTGACCTGGTGATCAAGGTTTACCCCGACGGGCAAGTTTCCGGTCACATG
TTCGGCCTCAAGGTTGGCGACATGGTCGAGGTGAAGGGACCGTTCCCCAA
GTTCGACTACTCGCCGAACGTGAAGAAGGAGATCGGAATGATCGCCGGCG
GCACCGGCATCACGCCGATGCTTCAGGTGCTGCAGGAGCTCCTGCTCAAC
CCGGAAGACAAGACGAAGGCGACCCTCCTCTTCGCCAACCAGACCCCGGC
AGACATCATGCTCAAGTCGGAGATCGACAAGCTCGCCGCCGAGCACGACA
ACTTTGAGGTCGTCTACATCGTGAGCAGCCCCGCAGACGGGTGGACGGGT
GTAACGGGGCACGTGAACGCCCCGCTGATCGAGGAACACCTCCCTAAGCC
TTCCGGAGATTCTATGATCTTTGTGTGCGGACCGCCGGGAATGGTGAACG
CCATGTGCGGGCCGAAGAACGAGGACAAGACTCAGGGAGACGTAACCGGA
GTGTTGAAGGACCTGGGCTTCACCTCCGAGAACGTGTACAAGTTTTGA
back to top