prot_P-littoralis_Contig687.20.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig687.20.2
Unique Nameprot_P-littoralis_Contig687.20.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length744
Homology
BLAST of mRNA_P-littoralis_Contig687.20.2 vs. uniprot
Match: A0A6H5JK21_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK21_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 2.860e-78
Identity = 204/510 (40.00%), Postives = 229/510 (44.90%), Query Frame = 0
Query:    1 MMGGGIDHSDILAALDAKRKRCVRKWTRKEDAEMVDLVGEHGTKQWGLIGSKLK----DRTGKQCRERWHNQLDPAIKKDPWTKAEEDVLMRAHSVHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSAG--VERRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGITVDTXXXXXXXXXXXXXXXXXXXXXXXSVRSGKNGSGDRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGERTSSPTSVADFALAGLGDNVFPTQQXXXXXXXXXXXXXXXXXXXXXGCDEDVGRARTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARIGSVRCTGGGSGGGFS---AVHEGEATVASASGGXXXXXXXXXXXXXAQSTAEYMSAQALFGGSIPGLTSFDRSEINSFHREKALLLSAARAAGDTQKRKMIEETTPDVLNAKGLLMFLRQSPSS-----SASP 496
            MMGG IDHSDIL ALDAKRKRCVRKW+++EDAEMV LV E G KQWGLIGS+L     DRTGKQCRERWHNQLDPAIKKDPWTKAEED LMRAHS+HGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMS    ++RR                                                                      +S  +  GD                                                       G R  +  +        +G  V                          G D+  GR +                                              RC G      +S   A   GE                      A+++A+ MSAQALFG SIPGLTSFDR+E++SF +EKA LLSAARA GDT+KRKM+EETTPDVLNAKGLLMFLRQSPSS     SASP
Sbjct:    1 MMGGDIDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSVNSVLDRR----------------------------------------------------------------------QSVSSSGGDEDEPHPATRPRGISG----------------------------------------GSRGPTAAAAGGXXXXXVGMTV------------------------ETGGDDSGGRNQG---------------------------------------------RCRG------YSRRDAAGTGEG---------------------ARTSADMMSAQALFGKSIPGLTSFDRAEMHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSETPSPSASP 304          
BLAST of mRNA_P-littoralis_Contig687.20.2 vs. uniprot
Match: A0A835YSF8_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF8_9STRA)

HSP 1 Score: 192 bits (488), Expect = 2.490e-53
Identity = 90/111 (81.08%), Postives = 98/111 (88.29%), Query Frame = 0
Query:   20 KRCVRKWTRKEDAEMVDLVGEHGTKQWGLIGSKLKDRTGKQCRERWHNQLDPAIKKDPWTKAEEDVLMRAHSVHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMS 130
            KR VRKW+ +ED  M  LV EHGT+QWGLIGS L  RTGKQCRERWHNQLDP IKKD WT+ EE+VLM+AHSVHGN+WAEIAK+LPGRTDNAIKNHWNSAKRRLSRQLNMS
Sbjct:   28 KRVVRKWSPEEDQLMALLVKEHGTRQWGLIGSLLSGRTGKQCRERWHNQLDPHIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLSRQLNMS 138          
BLAST of mRNA_P-littoralis_Contig687.20.2 vs. uniprot
Match: A0A835YW24_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW24_9STRA)

HSP 1 Score: 182 bits (463), Expect = 4.890e-51
Identity = 84/105 (80.00%), Postives = 93/105 (88.57%), Query Frame = 0
Query:   20 KRCVRKWTRKEDAEMVDLVGEHGTKQWGLIGSKLKDRTGKQCRERWHNQLDPAIKKDPWTKAEEDVLMRAHSVHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLS 124
            KR VRKW+ +ED  M+ LV EHGT+QWGLIGS L  RTGKQCRERWHNQLDP IKKD WT+ EE+VLM+AHSVHGN+WAEIAK+LPGRTDNAIKNHWNSAKRRLS
Sbjct:    3 KRSVRKWSPEEDQLMMLLVREHGTRQWGLIGSLLSGRTGKQCRERWHNQLDPMIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLS 107          
BLAST of mRNA_P-littoralis_Contig687.20.2 vs. uniprot
Match: A0A7S2CJK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJK5_9STRA)

HSP 1 Score: 186 bits (473), Expect = 6.320e-50
Identity = 83/116 (71.55%), Postives = 100/116 (86.21%), Query Frame = 0
Query:   12 LAALDAKRKRCVRKWTRKEDAEMVDLVGEHGTKQWGLIGSKLKDRTGKQCRERWHNQLDPAIKKDPWTKAEEDVLMRAHSVHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQL 127
            +A    K +R VRKWT +ED+ M+ LV EHGTK WG IGS L+ RTGKQCRERWHNQLDPAI+KDPWT  EE++L++AHS++GN+WAEIAK+LPGRTDNA+KNHWNSAKRRLSRQ+
Sbjct:   37 IADFAEKPRRVVRKWTPEEDSLMMTLVQEHGTKHWGRIGSSLQGRTGKQCRERWHNQLDPAIRKDPWTGGEEEILLKAHSLYGNRWAEIAKLLPGRTDNAVKNHWNSAKRRLSRQV 152          
BLAST of mRNA_P-littoralis_Contig687.20.2 vs. uniprot
Match: A0A7S0SQE8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQE8_9STRA)

HSP 1 Score: 173 bits (439), Expect = 8.030e-45
Identity = 80/108 (74.07%), Postives = 91/108 (84.26%), Query Frame = 0
Query:   19 RKRCVRKWTRKEDAEMVDLVGEHGTKQWGLIGSKLKDRTGKQCRERWHNQLDPAIKKDPWTKAEEDVLMRAHSVHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQ 126
            +KR VRKWT++ED  M+ LV EHGT+ WGLIG+KL  RTGKQCRERWHNQLDPAI K PWT+ EE +L+ AH+  GN+WAEIAK LPGRTDNAIKNHWNSAKRRL RQ
Sbjct:   14 QKRTVRKWTQEEDNLMMALVSEHGTRHWGLIGAKLNGRTGKQCRERWHNQLDPAINKTPWTEHEESLLLAAHNDLGNRWAEIAKRLPGRTDNAIKNHWNSAKRRLLRQ 121          
BLAST of mRNA_P-littoralis_Contig687.20.2 vs. uniprot
Match: A0A7R9U0E6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0E6_9STRA)

HSP 1 Score: 176 bits (446), Expect = 7.930e-43
Identity = 79/115 (68.70%), Postives = 96/115 (83.48%), Query Frame = 0
Query:   13 AALDAKRKRCVRKWTRKEDAEMVDLVGEHGTKQWGLIGSKLKDRTGKQCRERWHNQLDPAIKKDPWTKAEEDVLMRAHSVHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQL 127
            A+   ++KR VRKWT +ED  M+DLV   GTK+WGLIG +L+ RTGKQCRERWHNQLDP+I+KDPW+K EE +L+  H   GN+WAEIAK+LPGRTDNAIKNHWNSAKRRL+RQ+
Sbjct:   13 ASASGRKKRQVRKWTPEEDKLMMDLVNTFGTKRWGLIGGRLQGRTGKQCRERWHNQLDPSIRKDPWSKQEEAILIVVHQQVGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLTRQM 127          
BLAST of mRNA_P-littoralis_Contig687.20.2 vs. uniprot
Match: A0A6G0XQ76_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQ76_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.160e-42
Identity = 73/103 (70.87%), Postives = 87/103 (84.47%), Query Frame = 0
Query:   20 KRCVRKWTRKEDAEMVDLVGEHGTKQWGLIGSKLKDRTGKQCRERWHNQLDPAIKKDPWTKAEEDVLMRAHSVHGNKWAEIAKILPGRTDNAIKNHWNSAKRR 122
            ++CV+KWT +EDA M++LV  HGT++W LIGS L+ R GKQCRERWHNQLDP I+KDPWT  EE +L  AH+ +GNKWAEIAK+LPGRTDNAIKNHWNS KRR
Sbjct:   13 RKCVQKWTPEEDALMLELVQTHGTRRWSLIGSMLQGRNGKQCRERWHNQLDPNIRKDPWTPEEEMLLKVAHNKYGNKWAEIAKLLPGRTDNAIKNHWNSYKRR 115          
BLAST of mRNA_P-littoralis_Contig687.20.2 vs. uniprot
Match: A0A8K1FIZ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIZ4_PYTOL)

HSP 1 Score: 167 bits (422), Expect = 2.260e-42
Identity = 75/126 (59.52%), Postives = 93/126 (73.81%), Query Frame = 0
Query:    7 DHSDILAALDAKRKRCVRKWTRKEDAEMVDLVGEHGTKQWGLIGSKLKDRTGKQCRERWHNQLDPAIKKDPWTKAEEDVLMRAHSVHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSAG 132
            D      +   K ++ V KWT KED  M+ LV ++GT+ W +IG+KL  R GKQCRERWHNQLDPAI+KDPWT  EE +L  +H ++GNKWAEIAK+LPGRTDNAIKNHWNS+KRRL R  +  +G
Sbjct:   16 DEDHYRGSKKRKERKPVCKWTEKEDQMMIKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKDPWTDEEERILRESHELYGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRSSSTVSG 141          
BLAST of mRNA_P-littoralis_Contig687.20.2 vs. uniprot
Match: A0A485LUK2_9STRA (Aste57867_25154 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LUK2_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.950e-42
Identity = 76/112 (67.86%), Postives = 86/112 (76.79%), Query Frame = 0
Query:   20 KRCVRKWTRKEDAEMVDLVGEHGTKQWGLIGSKLKDRTGKQCRERWHNQLDPAIKKDPWTKAEEDVLMRAHSVHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSA 131
            ++ + KWT  EDA+MV+LV  HGT++W LIGS L  R GKQCRERWHNQLDPAI+KDPWT  EE +L  AH   GNKWAEIAK+LPGRTDNAIKNHWNS KRR  R L   A
Sbjct:   17 RKSINKWTAAEDAKMVELVQAHGTRRWSLIGSLLPGRNGKQCRERWHNQLDPAIRKDPWTADEETMLKIAHHKFGNKWAEIAKLLPGRTDNAIKNHWNSYKRRGHRALQHKA 128          
BLAST of mRNA_P-littoralis_Contig687.20.2 vs. uniprot
Match: I2CQ47_NANGC (Myb transcription factor (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ47_NANGC)

HSP 1 Score: 159 bits (401), Expect = 9.480e-42
Identity = 72/105 (68.57%), Postives = 87/105 (82.86%), Query Frame = 0
Query:   20 KRCVRKWTRKEDAEMVDLVGEHGTKQWGLIGSKLKDRTGKQCRERWHNQLDPAIKKDPWTKAEEDVLMRAHSVHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLS 124
            K+ VRKW+ +EDAEMV LV E GTKQWG IG +L  R+GKQCRERWHNQLDP IKK+ W+  EE VL + H+ +GN+WAEIA+ LPGRTDNAIKNHWN+A+RR+S
Sbjct:   20 KKMVRKWSAEEDAEMVRLVKELGTKQWGQIGIQLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMVLQQKHAEYGNRWAEIARFLPGRTDNAIKNHWNNARRRMS 124          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig687.20.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK21_9PHAE2.860e-7840.00MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A835YSF8_9STRA2.490e-5381.08Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
A0A835YW24_9STRA4.890e-5180.00Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A7S2CJK5_9STRA6.320e-5071.55Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S0SQE8_9STRA8.030e-4574.07Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7R9U0E6_9STRA7.930e-4368.70Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6G0XQ76_9STRA1.160e-4270.87Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1FIZ4_PYTOL2.260e-4259.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485LUK2_9STRA4.950e-4267.86Aste57867_25154 protein n=1 Tax=Aphanomyces stella... [more]
I2CQ47_NANGC9.480e-4268.57Myb transcription factor (Fragment) n=1 Tax=Nannoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 297..317
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 26..83
e-value: 5.6E-14
score: 52.1
NoneNo IPR availableGENE3D1.10.10.60coord: 24..74
e-value: 9.5E-18
score: 65.9
NoneNo IPR availableGENE3D1.10.10.60coord: 77..119
e-value: 3.3E-19
score: 70.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 579..623
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..339
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 19..312
IPR001005SANT/Myb domainSMARTSM00717santcoord: 22..71
e-value: 2.7E-10
score: 50.2
coord: 74..122
e-value: 5.2E-15
score: 65.9
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 70..120
score: 10.208708
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 25..69
score: 10.696428
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 77..117
e-value: 4.44867E-12
score: 59.1262
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 25..67
e-value: 1.27851E-11
score: 57.9706
IPR028311Myb-related protein BPANTHERPTHR45614:SF30MYB-RELATED PROTEIN Bcoord: 19..312
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 24..69
score: 17.353115
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 70..124
score: 26.157949
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 22..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig687contigP-littoralis_Contig687:67319..77592 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig687.20.2mRNA_P-littoralis_Contig687.20.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig687 67319..77717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig687.20.2 ID=prot_P-littoralis_Contig687.20.2|Name=mRNA_P-littoralis_Contig687.20.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=744bp
MMGGGIDHSDILAALDAKRKRCVRKWTRKEDAEMVDLVGEHGTKQWGLIG
SKLKDRTGKQCRERWHNQLDPAIKKDPWTKAEEDVLMRAHSVHGNKWAEI
AKILPGRTDNAIKNHWNSAKRRLSRQLNMSAGVERRRSTSSSGGDEDDPP
PPNYSARPRGGGRGSAGGASAAGRVGITVDTSSSSNGRSGGRLASGGGGG
FGGGSVRSGKNGSGDRRRHSSSSSSSRSSSSSSSSSSGSGNGSGGSCRGN
GRIRKDSGAGGNENPDDEDDGERTSSPTSVADFALAGLGDNVFPTQQQQQ
QQRKQRMRRQQQQQRQQDGCDEDVGRARTGASASNSSGYGGGEAARGSAS
GCAGKAHARAAAAAAAAAARIGSVRCTGGGSGGGFSAVHEGEATVASASG
GGRGSGGASGGSEGAQSTAEYMSAQALFGGSIPGLTSFDRSEINSFHREK
ALLLSAARAAGDTQKRKMIEETTPDVLNAKGLLMFLRQSPSSSASPAAAV
AAGVGAGLMLDGGVRSSANMSSFSAEDGAGDGGGVLGDADGGVTLRNRDG
VCATAAAAAAAAAAAAVGLAAVGRTGPPPPVPHVAGAHSLPPSSVPVASA
ARGKGEGGDASSPSVTIALSASPRGGADADAGASAGARAVSALPATPVTP
SAPPVAGADAAVAAGAARVLPDACATAANTAMAAPRTACKPWKPRYRLPV
VTPSPVTSAASAATAGPHGQQVAPSPAAAARAAAATGGAAAHVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR028311MYBL2
IPR017930Myb_dom
IPR009057Homeobox-like_sf