prot_P-littoralis_Contig687.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig687.9.1
Unique Nameprot_P-littoralis_Contig687.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length408
Homology
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BLAST of mRNA_P-littoralis_Contig687.9.1 vs. uniprot
Match: A0A6H5JJF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJF4_9PHAE)

HSP 1 Score: 374 bits (960), Expect = 4.810e-124
Identity = 206/329 (62.61%), Postives = 233/329 (70.82%), Query Frame = 0 
Query:   55 MSRIVRFLGRTKAYFMECKQNMAPQPNPEWYEEKNDTRVTLKNLRKLPLSVHAEVWSSTWKWYAGSFEESFAWGRRRKEEARKKAAREKMDGLQGMIEEARVATHNTPEDIENSKKALKELLEEIHDNRDELKSAAQEKLDLIRVSLSEFSTGYREARDEEITRVMAMDKSALQAFLHDRAGEVKHATSIITDAILEKD--------------------------SNNDRSSTSSSRGKTNRNPSXXXXXXXXXXXXXXXXXXXXXXXXGGRGDADSGPSRFLSQQTRQAVDDFLEDPDVERLTGRAKGFARERLLQAEAAARVLKGTD 357
            MSR+VR LGRTKAY MECKQNMAP PNPEWYEE  DTRVT KNLRKLPLSVH E+WSSTWKWY  SF ESFAW R+RKEEA+K+ A EKM  LQGM++EAR  THN+PED+E SK+ALKEL+EEIH+NRDELKSAAQEKLDLIRVSLSEFSTGYREARDEEI RVMAMDKS +Q+FL +RAGEVKHATS+I DAILEKD                          S+N+ +   SS G+    P                          G  D D G +RFLS + R+AVDD L DPDVERL GRAKGFARERLL+AE AAR++ G +
Sbjct:    1 MSRVVRLLGRTKAYIMECKQNMAPLPNPEWYEEGKDTRVTFKNLRKLPLSVHTEIWSSTWKWYRASFAESFAWSRKRKEEAKKREAHEKMSTLQGMVKEAREITHNSPEDLEKSKEALKELMEEIHENRDELKSAAQEKLDLIRVSLSEFSTGYREARDEEIKRVMAMDKSMIQSFLSERAGEVKHATSVIADAILEKDGDAGGSSSREEGEQSSSAMRSAPAPPSHNNAAPCVSSVGRPQERPGTVSSTTAASDAESHPNNDP------GHADLDGGATRFLSPRARRAVDDVLRDPDVERLAGRAKGFARERLLKAEEAARIITGEE 323
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BLAST of mRNA_P-littoralis_Contig687.9.1 vs. uniprot
Match: D8LCT5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT5_ECTSI)

HSP 1 Score: 325 bits (834), Expect = 8.670e-107
Identity = 182/292 (62.33%), Postives = 206/292 (70.55%), Query Frame = 0 
Query:   76 MAPQPNPEWYEEKNDTRVTLKNLRKLPLSVHAEVWSSTWKWYAGSFEESFAWGRRRKEEARKKAAREKMDGLQGMIEEARVATHNTPEDIENSKKALKELLEEIHDNRDELKSAAQEKLDLIRVSLSEFSTGYREARDEEITRVMAMDKSALQAFLHDRAGEVKHATSIITDAILEKDSNNDRSSTSSSRGKT--------------NRNPSXXXXXXXXXXXXXXXXXXXXXXXXG------GRGDADSGPSRFLSQQTRQAVDDFLEDPDVERLTGRAKGFARERLLQAE 347
            MAP PNPEWYEE  DTRVT KNLRKLPLSVH E+WSSTWKWY  SF ESFAW R+RKEEA+K+ A EKM+ L+GM++EAR  THN+PED+E SK+ALKEL+EEIH+NRDELKSAAQEKLDLIRVSLSEFSTGYR+ARDEEI RVMAMDKS LQ+FL +RAGEVKHATS+I DAILEKD     SS+    G++              N  P                                G  D D G +RFLS + R+AVDD L DPDVERL GRAKGFARERLL+AE
Sbjct:    1 MAPLPNPEWYEEGKDTRVTFKNLRKLPLSVHTEIWSSTWKWYRESFAESFAWSRKRKEEAKKREAHEKMNTLRGMVKEAREVTHNSPEDLEKSKEALKELMEEIHENRDELKSAAQEKLDLIRVSLSEFSTGYRQARDEEIKRVMAMDKSMLQSFLSERAGEVKHATSLIADAILEKDGGAGGSSSREEGGRSSPALRSAPAPPSINNAAPDASSVARPREQPGTVSSTTAASDAESHPSNDPGHADLDGGATRFLSPRARRAVDDVLRDPDVERLAGRAKGFARERLLKAE 292
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig687.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJF4_9PHAE4.810e-12462.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCT5_ECTSI8.670e-10762.33Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..192
NoneNo IPR availableCOILSCoilCoilcoord: 130..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..407

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig687contigP-littoralis_Contig687:46044..62708 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig687.9.1mRNA_P-littoralis_Contig687.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig687 45978..62803 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig687.9.1 ID=prot_P-littoralis_Contig687.9.1|Name=mRNA_P-littoralis_Contig687.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=408bp
MQKGVPLRTNIEYLLIGGPPTSDTAAVPHYHNHTPDETSIVQQRHRRRHP
TSSIMSRIVRFLGRTKAYFMECKQNMAPQPNPEWYEEKNDTRVTLKNLRK
LPLSVHAEVWSSTWKWYAGSFEESFAWGRRRKEEARKKAAREKMDGLQGM
IEEARVATHNTPEDIENSKKALKELLEEIHDNRDELKSAAQEKLDLIRVS
LSEFSTGYREARDEEITRVMAMDKSALQAFLHDRAGEVKHATSIITDAIL
EKDSNNDRSSTSSSRGKTNRNPSAPASTTTAAAATSDASPPTTDDDDGGR
GDADSGPSRFLSQQTRQAVDDFLEDPDVERLTGRAKGFARERLLQAEAAA
RVLKGTDGDDDDDDDGDGSASQRQQQQQQQQSGDRRKGRRGPRLRERWST
TTLGKLR*
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