prot_P-littoralis_Contig687.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig687.4.1
Unique Nameprot_P-littoralis_Contig687.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length84
Homology
BLAST of mRNA_P-littoralis_Contig687.4.1 vs. uniprot
Match: D7FHU0_ECTSI (Cytochrome c oxidase subunit VIa n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHU0_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 1.240e-46
Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 0
Query:    1 MSGDAAHAAEEMAKWKKMTAGMAVLSVAVTALVLATEEHHHADEDAPVPSYMKIRNKPYPWTCADCSLLDSACFEKCKADR 81
            MSGDAAHAAEEMAKWKKMTAGM VLS+AVT LVLATEEHHH DEDAP+PSYMKIRNKP+PW CADC+LLDSACF KCKA+R
Sbjct:   25 MSGDAAHAAEEMAKWKKMTAGMGVLSLAVTTLVLATEEHHHRDEDAPIPSYMKIRNKPHPWNCADCTLLDSACFAKCKAER 105          
BLAST of mRNA_P-littoralis_Contig687.4.1 vs. uniprot
Match: A0A4D9D930_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D930_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.810e-16
Identity = 37/80 (46.25%), Postives = 55/80 (68.75%), Query Frame = 0
Query:    7 HAAEEMAKWKKMT---AGMAVLSVAVTALVLATEEH-HHADEDAPVPSYMKIRNKPYPWTCADCSLLDSACFEKCKADRA 82
            H A+E+ KW+K++    G+ +L      L L++  H  H+D+  P+P YM IR+KP+PW C+DCSL D+ CF+KCKA+RA
Sbjct:   29 HGADEVDKWRKISIVATGVVILMSGRELLSLSSHGHGEHSDK--PLPDYMHIRSKPFPWECSDCSLFDTDCFKKCKAERA 106          
BLAST of mRNA_P-littoralis_Contig687.4.1 vs. uniprot
Match: A0A7S3ZZW1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZW1_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.170e-14
Identity = 41/83 (49.40%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    1 MSGDAAHAAEEMAKWKKMTAGM----AVLSVAVTALVLATEEHHHADEDAPVPSYMKIRNKPYPWTCADCSLLDSACFEKCKA 79
            MSGDAA AA EMAKW K + G      VLS  +  +      H H  ED    S+MKIR KPYPW C DC+L ++ CF  CKA
Sbjct:   24 MSGDAAEAAIEMAKWTKYSYGAIAFCGVLSTYIGIVEYRHMMHPHEHEDIAY-SHMKIRAKPYPWDCPDCNLFEAQCFRDCKA 105          
BLAST of mRNA_P-littoralis_Contig687.4.1 vs. uniprot
Match: A0A7S3Y541_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y541_HETAK)

HSP 1 Score: 67.4 bits (163), Expect = 3.180e-11
Identity = 34/72 (47.22%), Postives = 41/72 (56.94%), Query Frame = 0
Query:   12 MAKWKKMTAGMAVLSVAVTALVLATEEHHHADEDAPVPS----YMKIRNKPYPWTCADCSLLDSACFEKCKA 79
            M KWKKM+ GM V  + V  ++ A +   H             YMKIRNKPYPWTC DC   DSAC ++CKA
Sbjct:    1 MVKWKKMSQGM-VAFMGVVGVLTAIQHSMHXXXXXXXXXXXXXYMKIRNKPYPWTCTDCDFFDSACHKECKA 71          
BLAST of mRNA_P-littoralis_Contig687.4.1 vs. uniprot
Match: A0A7S4DCJ6_HETAK (Hypothetical protein (Fragment) n=5 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCJ6_HETAK)

HSP 1 Score: 67.4 bits (163), Expect = 3.190e-11
Identity = 34/72 (47.22%), Postives = 41/72 (56.94%), Query Frame = 0
Query:   12 MAKWKKMTAGMAVLSVAVTALVLATEEHHHADEDAPVPS----YMKIRNKPYPWTCADCSLLDSACFEKCKA 79
            M KWKKM+ GM V  + V  ++ A +   H             YMKIRNKPYPWTC DC   DSAC ++CKA
Sbjct:    1 MVKWKKMSQGM-VAFMGVVGVLTAIQHSMHXXXXXXXXXXXXXYMKIRNKPYPWTCTDCDFFDSACHKECKA 71          
BLAST of mRNA_P-littoralis_Contig687.4.1 vs. uniprot
Match: A0A7S4EH99_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EH99_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 3.270e-11
Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 0
Query:   11 EMAKWKKMTAGMAVLS-VAVTALVLATEEHHHADEDAPVPSYMKIRNKPYPWTCADCSLLDSACFEKCKADRAA 83
            E+  W K++  + V   VA+ A  LA EEHHH   D P+P YM IR+K +PW C  C L D  C++KC+ +++A
Sbjct:   34 ELWTWIKISIFVCVPGCVAMVAKDLAIEEHHHRP-DGPLPEYMSIRSKEFPWECDQCPLFDLNCWKKCREEQSA 106          
BLAST of mRNA_P-littoralis_Contig687.4.1 vs. uniprot
Match: A0A7S2G097_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G097_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 4.630e-11
Identity = 28/71 (39.44%), Postives = 46/71 (64.79%), Query Frame = 0
Query:   11 EMAKWKKMTAGMAVLSVAVTALVLATEEHHHADEDAPVPSYMKIRNKPYPWTCADCSLLDSACFEKCKADR 81
            +M  W K++  +A+  V+V  +V+   E  H   +AP  S+ KIR KPYPW C+DC+L D  C+++C+A++
Sbjct:   36 DMNNWIKISV-VAIGGVSVAGVVIGYLESQHHHHEAPPRSFKKIRAKPYPWECSDCTLFDLECWKECRANK 105          
BLAST of mRNA_P-littoralis_Contig687.4.1 vs. uniprot
Match: F0Y9U8_AURAN (Trifunctional purine biosynthetic protein adenosine-3 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9U8_AURAN)

HSP 1 Score: 65.1 bits (157), Expect = 2.140e-10
Identity = 31/70 (44.29%), Postives = 43/70 (61.43%), Query Frame = 0
Query:   12 MAKWKKMTAGMAVLSVAVTALVLATEEHHHA---DEDAPVPSYMKIRNKPYPWTCADCSLLDSACFEKCK 78
            M+KW K + G    S  +   V+ TE +H A   +   P  S++KIR KPYPW+C DC+L DSAC++ CK
Sbjct: 1024 MSKWVKYSYGALAFSGTLGTYVVITELNHLAHPHESHTPAMSHLKIRAKPYPWSCPDCNLFDSACWKACK 1093          
BLAST of mRNA_P-littoralis_Contig687.4.1 vs. uniprot
Match: B8BXS5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXS5_THAPS)

HSP 1 Score: 53.1 bits (126), Expect = 7.450e-7
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 0
Query:   10 EEMAKWKKMTAGMA----VLSVAVTALVLATEEHHHADEDAPVPSYMKIRNKPYPWTCADCSLLDSACFEKCKADR 81
            +EM KW K++A +A    VLSV     ++   +H H     P+P YM I+ K +PW C  C+L D  C++KC+A++
Sbjct:   67 QEMWKWVKISAVVATPVCVLSVLKDIFLV---DHVHRPH-GPLPDYMNIQVKEFPWECETCALFDLECWKKCRAEQ 138          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig687.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FHU0_ECTSI1.240e-4687.65Cytochrome c oxidase subunit VIa n=2 Tax=Ectocarpu... [more]
A0A4D9D930_9STRA2.810e-1646.25Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3ZZW1_9STRA1.170e-1449.40Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3Y541_HETAK3.180e-1147.22Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DCJ6_HETAK3.190e-1147.22Hypothetical protein (Fragment) n=5 Tax=Heterosigm... [more]
A0A7S4EH99_9STRA3.270e-1143.24Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2G097_9STRA4.630e-1139.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0Y9U8_AURAN2.140e-1044.29Trifunctional purine biosynthetic protein adenosin... [more]
B8BXS5_THAPS7.450e-738.16Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036418Cytochrome c oxidase, subunit VIa superfamilyGENE3D4.10.95.10Cytochrome c oxidase, subunit VIacoord: 2..78
e-value: 5.0E-16
score: 60.4
IPR036418Cytochrome c oxidase, subunit VIa superfamilySUPERFAMILY81411Mitochondrial cytochrome c oxidase subunit VIacoord: 5..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig687contigP-littoralis_Contig687:16837..18553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig687.4.1mRNA_P-littoralis_Contig687.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig687 16768..19522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig687.4.1 ID=prot_P-littoralis_Contig687.4.1|Name=mRNA_P-littoralis_Contig687.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=84bp
MSGDAAHAAEEMAKWKKMTAGMAVLSVAVTALVLATEEHHHADEDAPVPS
YMKIRNKPYPWTCADCSLLDSACFEKCKADRAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036418Cyt_c_oxidase_su6a_sf