mRNA_P-littoralis_Contig686.23.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig686.23.1 vs. uniprot
Match: A0A6H5L010_9PHAE (Atx10homo_assoc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L010_9PHAE) HSP 1 Score: 556 bits (1434), Expect = 1.230e-178 Identity = 414/849 (48.76%), Postives = 463/849 (54.53%), Query Frame = 2
Query: 152 INGTDQDQDPAFDAPTPQASPEAARALGRLFTVLRNSCAGCPANNKALRHTGLAEAA--LRFAIDQAPFACGAELPHPAPTENNRCSSGNSIVRIDGSNAGGSXXXXXXXXXXXXXXXXXXXXXVGGDTAGVKFAVRAGLQFACNFCVGIEDNKALLWDAWFPRGLMELANGLKTDRGLLSLAVALVHNCCLSSPPQSQPQPRERGDDCGGSDRGSQRKNGARGGEGRQEVEKEERQEDEGRQRLGRLVADRAFCCLLMKAVVPQTSAXXXXXXXXXXXXXSAPSAGRGSGVNPNPDPAAEWLYLLFCRFVEGRLCRDVYENVGIRTGGGQRRQRQRQHQSIEGVVCSGAEEGGDGAVEAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPVTPEQLIALNLAELAAG------DEVVTGGERPDSQQSQACEALVAWLVGLLSAMPLNQRLLPQIYTATA-----------------------AAVAAAVAEDGVDGEVVDWQTERVRWRMREEARSSVLRTLAALLAGCGDETRRTAATWTTTPVST----------------PDIPTAAAAAPGEAGAXXXXXXXXXXGVSNGNCTGAECAVQAVPHNSEDAIGACDAAPPRPPKIMTTVPVGAPPETR-LVPLCLRLLRGCGGAAEPKSAVKPSSSAGXXXXXXXXXXXXXXXXXXXXXARETDNLAGEGVRGAVTADAAGVPGDVPAGRKVELLKVIGNACFRCRDAQDSVREEGGLPLVLNHCAMDEANPFLREHALLTVRNLCEGNPANQASIAALQPQGCTPGMDEALADMGLEGHVDGEGGFKVGPRPAAA 2554
+ G D QDP FD P+ P AARAL R FT LRN+CAGCP NN ALRHTGLAEAA L+FA+DQA FAC A HPA + C S VGG T+ V+ AVRAGLQFA N+C G E++K LW AWFPRGLMEL N LKTDRGLLSLAVAL+HNCC+S P+PRE G+D GSDRGS R NGA G G +E + ER GR+RL L AD+AFC XXXX S + SG P+ DPAAEWLYLLFC FV+ RLCR VY+NVGIR G +RR+R R+ VV A G E G+ XXXXXXXXXXXXXXXX PVTPEQLI LNLAELA G DEVVTGGE P +Q QAC AL +WL GLLSAMPL+Q LLP+ TA + ++A ED DG D +TERVR MREEARS+ LR LAALLAGC DETR+ A P A GEA G G C VP ED P T PV PE R LVPLCLRLL GCGGAAEP PS+S+G AR +G RGA++ G VPAGRKVELLKVIGNACFRCR +QD VREEGGLPLVLNHCA+DE NP LRE+ALL VRNLCEGNPANQASIA+LQPQGCTPGM E+LADMGLEG V+ EG F VGPRP +
Sbjct: 69 LPGGDLPQDPPFDTAPPRTPPAAARALRRAFTFLRNACAGCPGNNHALRHTGLAEAASALQFAVDQALFAC-ATTSHPAAS-TAECQS-----------------------------------EVGG-TSDVRLAVRAGLQFAYNYCAGSEESKVSLWAAWFPRGLMELVNELKTDRGLLSLAVALIHNCCIS------PRPREPGED-DGSDRGSNRDNGA-GEAGXEEADGGER--SRGRERLALLSADKAFCXXXXXXXXXXXXXXXXXVGA------SGSHSRERSGGEPDDDPAAEWLYLLFCCFVQERLCRRVYDNVGIRAG--KRRKRPRRRGGCGAVVVDSARVAQSGGEEDGAAGGSGSVRAISGVGRGEEEWGEGGKGRVDEXXXXXXXXXXXXXXXXXPVTPEQLIVLNLAELATGKCGWNSDEVVTGGECPSPRQRQACSALASWLTGLLSAMPLSQSLLPRTGTAQPXXXXXXXXXXXXXXXXXXXXKPLSPSSSAGDEDRGDGVAADAETERVRRSMREEARSAALRGLAALLAGCSDETRQQIAXXXXXXXXXXXXXXXXXXXXXXXXXPQQAATLGVALGEAEETTRSAAKATAAGVGGASEGEGCEATRVPRVREDGGXXXXXXXXXTPT--TATPVVLHPEPRGLVPLCLRLLHGCGGAAEPN----PSASSGQFSRKKGSTASAAVAAGARDTAR-----SGSHHRGALSG------GAVPAGRKVELLKVIGNACFRCRRSQDLVREEGGLPLVLNHCAVDETNPLLREYALLAVRNLCEGNPANQASIASLQPQGCTPGMVESLADMGLEGSVNAEGKFTVGPRPTTS 844
BLAST of mRNA_P-littoralis_Contig686.23.1 vs. uniprot
Match: D8LJX9_ECTSI (Atx10homo_assoc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX9_ECTSI) HSP 1 Score: 421 bits (1083), Expect = 4.780e-130 Identity = 337/782 (43.09%), Postives = 378/782 (48.34%), Query Frame = 2
Query: 320 ALRFAIDQAPFACGAELPHPAPTENNRCSSGNSIVRIDGSNAGGSXXXXXXXXXXXXXXXXXXXXXVGGDTAGVKFAVRAGLQFACNFCVGIEDNKALLWDAWFPRGLMELANGLKTDRGLLSLAVALVHNCCLSSPPQSQPQPRERGDDCGGSDRGSQRKNGARGGEGRQEVEKEERQEDEGRQRLGRLVADRAFCCLLMKAVVPQTSAXXXXXXXXXXXXXSAPSAGRGSGVNPNPDPAAEWLYLLFCRFVEGRLCRDVYENVGIRTGGGQRRQRQRQHQSIEGVVCSGAEEGGDGAVEAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPVTPEQLIALNLAELAAGDEVVTGGERPDSQQSQACEALVAWLVGLLSAMPLNQRLLPQIYTATAAAVA------------------AAVAEDGVDGEVVDWQTERVRWRMREEARSSVLRTLAALLAGCGDETRRTAATWTTTPVSTPDIPT------------------AAAAAPGEAGAXXXXXXXXXXGVSNGNCTGAECAVQAVPHNSEDAIGACDAAPPRPPKIMTTVPVGAPPETR-LVPLCLRLLRGCGGAAEPKSAVKPSSSAGXXXXXXXXXXXXXXXXXXXXXARETDNLAGEGVRGAVTADAAGVPGDVPAGRKVELLKVIGNACFRCRDAQDSVREEGGLPLVLNHCAMDEANPFLREHALLTVRNLCEGNPANQASIAALQPQGCTPGMDEALADMGLEGHVDGEGGFKVGPRPAAA 2554
AL+FA+DQAPFAC A HPA R + S V GD + V+ AVRAGLQFA N+C G E++KA LW AWFPRGLMEL N LKTDRGLLSLAVALVHNCC+S PP+ +PRE DD GS R S R NG G ER GR+RL L AD+AFCC XXXXXXXXXXXXX AAEWLYLLFC FV+ RLCR VY+NVGIR G +R R++ DEVVTGGERP +Q QAC AL AWL GLLSA+PL+Q LLP+ TA +A E+ DG D +TERVR MREEARS+ LR LAALLAGC DETR+ A GEA S G G C V VP SED G + P P T PV A PE LVPLCLRLL GCGGAAEP P++S+G A + GE GAV PAGRKVELLKVIGNACFRCR +QD VREEGGLPLVLNHC +DEANP LRE+ALL +RNLCEGN ANQASI++LQPQGCTPGM+EALADMGLEG V+ EG F VGPRP +
Sbjct: 3 ALQFAVDQAPFAC-ATTSHPAA----RTAECQSEV---------------------------------GDASDVRLAVRAGLQFAYNYCAGSEESKASLWAAWFPRGLMELVNELKTDRGLLSLAVALVHNCCISPPPR---EPRE--DD--GSPRESNRDNGT-GEAXXXXXXXXER--SRGRERLDLLSADKAFCCXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXAAEWLYLLFCCFVQERLCRRVYDNVGIRAGKRTKRPRRQ-----------------------------------------------------------------------------------------ADEVVTGGERPCPRQRQACGALAAWLTGLLSAIPLSQSLLPRTGTAQPPXXXXXXXXXXXXXXXXXXXXXSAGHEERGDGVATDAETERVRRSMREEARSAALRALAALLAGCSDETRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGVASGEAEETTRSAAKVTAAGSGGASEGEGCEVARVPRVSEDGGGGRGGSLPLTPT--TATPVIAQPEPLGLVPLCLRLLHGCGGAAEPN----PAASSGQFSRKEGSTASAAVATGAGDTAPNGSHHRGELPDGAV-----------PAGRKVELLKVIGNACFRCRRSQDLVREEGGLPLVLNHCKVDEANPLLREYALLALRNLCEGNAANQASISSLQPQGCTPGMEEALADMGLEGSVNAEGKFAVGPRPTTS 624
BLAST of mRNA_P-littoralis_Contig686.23.1 vs. uniprot
Match: A0A835ZAD7_9STRA (Spinocerebellar ataxia type 10 protein domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD7_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.960e-23 Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 2
Query: 2216 GDVPAGRKVELLKVIGNACFRCRDAQDSVREEGGLPLVLNHCAMDEANPFLREHALLTVRNLCEGNPANQASIAALQPQG 2455
G VP GRK +L+KVI NAC CR AQD VR GG+PLVL+HC +D A+PFLRE ++ VRNLCEGN NQA +A L+ QG
Sbjct: 21 GGVPHGRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQG 100
BLAST of mRNA_P-littoralis_Contig686.23.1 vs. uniprot
Match: A0A0L0HAC6_SPIPD (Copper transport protein 86 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HAC6_SPIPD) HSP 1 Score: 107 bits (268), Expect = 2.340e-20 Identity = 42/100 (42.00%), Postives = 68/100 (68.00%), Query Frame = 2
Query: 2237 KVELLKVIGNACFRCRDAQDSVREEGGLPLVLNHCAMDEANPFLREHALLTVRNLCEGNPANQASIAALQPQGCTPGMDEALADMGLEGHVDGEGGFKVG 2536
K + +KV+ N C+ ++ QD +R GG+P++LN C +D+ NP+++EHA+L +RNLC+GN NQ +A+L PQG P ++ L + G++ VD G +VG
Sbjct: 439 KSDTVKVLANLCYEAKEVQDEIRRIGGIPVILNECRVDDNNPYIKEHAILAIRNLCDGNTENQDLVASLTPQGIAPESEQMLDEAGIQAKVDDSGRVRVG 538
BLAST of mRNA_P-littoralis_Contig686.23.1 vs. uniprot
Match: A0A3M6VRE6_9STRA (Atx10homo_assoc domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRE6_9STRA) HSP 1 Score: 107 bits (266), Expect = 4.250e-20 Identity = 51/103 (49.51%), Postives = 68/103 (66.02%), Query Frame = 2
Query: 2225 PAGRKVELLKVIGNACFRCRDAQDSVREEGGLPLVLNHCAMDEANPFLREHALLTVRNLCEGNPANQASIAALQPQGCTPGMDEALADMGLEGHVDGEGGFKV 2533
P G + L++VIGN CFR QD +R+EG LPL LNHC +DE NP +RE +L+ +RNLCEGN ANQ+ I AL+PQG D AL + H++ +G K+
Sbjct: 457 PLGYRSRLIRVIGNLCFRHTYHQDLIRDEGYLPLFLNHCNIDETNPLVREWSLVALRNLCEGNEANQSFINALRPQGMDAASDTALEKAKVRVHIEEDGKVKL 559
BLAST of mRNA_P-littoralis_Contig686.23.1 vs. uniprot
Match: A0A329S699_9STRA (Atx10homo_assoc domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S699_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.340e-19 Identity = 52/103 (50.49%), Postives = 66/103 (64.08%), Query Frame = 2
Query: 2225 PAGRKVELLKVIGNACFRCRDAQDSVREEGGLPLVLNHCAMDEANPFLREHALLTVRNLCEGNPANQASIAALQPQGCTPGMDEALADMGLEGHVDGEGGFKV 2533
P G + L++VIGN FR D QD VREEG LPL LNHC +DE NP +RE +L+ +RNLCEGN ANQ+ I AL+PQG AL + + G+G K+
Sbjct: 460 PFGYRSGLIRVIGNLSFRDTDHQDLVREEGYLPLFLNHCNIDETNPMIREWSLVALRNLCEGNEANQSYINALRPQGMDAASTAALEKAKMRADIGGDGNVKL 562
BLAST of mRNA_P-littoralis_Contig686.23.1 vs. uniprot
Match: A0A2D4BF77_PYTIN (Atx10homo_assoc domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF77_PYTIN) HSP 1 Score: 102 bits (255), Expect = 1.860e-19 Identity = 51/106 (48.11%), Postives = 70/106 (66.04%), Query Frame = 2
Query: 2225 PAGRKVELLKVIGNACFRCRDAQDSVREEGGLPLVLNHCAMDEANPFLREHALLTVRNLCEGNPANQASIAALQPQGCTPGMDEALADM---GLEGHVDGEGGFKV 2533
P G + +++V+GN C+R D QD VRE+G LPL LNHC +DE NP LRE +L+ +RNLCEGN ANQ I AL+PQG +D+ D+ ++ +D +G KV
Sbjct: 279 PFGYRSAIIRVVGNLCYRQTDHQDIVREKGFLPLFLNHCNVDEMNPLLREWSLVALRNLCEGNEANQQYITALRPQG----IDKTSVDLDGLNVDAKLDADGKLKV 380
BLAST of mRNA_P-littoralis_Contig686.23.1 vs. uniprot
Match: W2PP19_PHYPN (Atx10homo_assoc domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2PP19_PHYPN) HSP 1 Score: 104 bits (260), Expect = 2.350e-19 Identity = 54/101 (53.47%), Postives = 68/101 (67.33%), Query Frame = 2
Query: 2225 PAGRKVELLKVIGNACFRCRDAQDSVREEGGLPLVLNHCAMDEANPFLREHALLTVRNLCEGNPANQASIAALQPQGCTPGMDEAL------ADMGLEGHV 2509
P G + L++VIGN FR D QD VREEG LPL LNHC +DE NP +RE +L+ +RNLCEGN ANQ+ I AL+PQG + AL AD+G++G V
Sbjct: 459 PFGYRSGLIRVIGNLSFRHTDHQDLVREEGYLPLFLNHCNIDETNPMIREWSLVALRNLCEGNEANQSYINALRPQGMDAASNAALDKAKMQADIGVDGKV 559
BLAST of mRNA_P-littoralis_Contig686.23.1 vs. uniprot
Match: A0A662XYY0_9STRA (Atx10homo_assoc domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYY0_9STRA) HSP 1 Score: 103 bits (257), Expect = 4.150e-19 Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = 2
Query: 2213 PGDVPAGRKVELLKVIGNACFRCRDAQDSVREEGGLPLVLNHCAMDEANPFLREHALLTVRNLCEGNPANQASIAALQPQGCTPGMDEALADMGLEGHVDGEGGFKV 2533
P P G + L++V+GN FR QD VR+EG LPL LNHC +DE NP +RE +L+ +RNLCEGN ANQ+ I+AL+PQG AL + VD +G K+
Sbjct: 411 PSTEPFGYRSGLIRVVGNLSFRHSAHQDLVRDEGYLPLFLNHCNIDETNPLIREWSLVALRNLCEGNEANQSYISALRPQGMDSASSVALEKAQMHAEVDDDGKIKL 517
BLAST of mRNA_P-littoralis_Contig686.23.1 vs. uniprot
Match: A0A8K1CP50_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP50_PYTOL) HSP 1 Score: 102 bits (255), Expect = 9.560e-19 Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 2
Query: 2216 GDVPAGRKVELLKVIGNACFRCRDAQDSVREEGGLPLVLNHCAMDEANPFLREHALLTVRNLCEGNPANQASIAALQPQGCTPGMDEALADMGLEGHVDGEGGFKVGPRPAAAT 2557
G P G + +++V+GN C R Q+ VREEG LPL LNHC +DE NP LRE +L+ +RNLCEGN ANQA I AL+PQG + L+++ +E + +G +V +P +T
Sbjct: 452 GKEPFGYRSAIIRVVGNMCHRQESHQNLVREEGYLPLFLNHCNIDEPNPLLREWSLVALRNLCEGNEANQAYITALRPQGLDS-SNVNLSNVNVEASLSDDGKVRVTQKPGPST 564 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig686.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig686.23.1 >prot_P-littoralis_Contig686.23.1 ID=prot_P-littoralis_Contig686.23.1|Name=mRNA_P-littoralis_Contig686.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=648bp MELANGLKTDRGLLSLAVALVHNCCLSSPPQSQPQPRERGDDCGGSDRGSback to top mRNA from alignment at P-littoralis_Contig686:82582..90101+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig686.23.1 ID=mRNA_P-littoralis_Contig686.23.1|Name=mRNA_P-littoralis_Contig686.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7520bp|location=Sequence derived from alignment at P-littoralis_Contig686:82582..90101+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig686:82582..90101+ >mRNA_P-littoralis_Contig686.23.1 ID=mRNA_P-littoralis_Contig686.23.1|Name=mRNA_P-littoralis_Contig686.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1944bp|location=Sequence derived from alignment at P-littoralis_Contig686:82582..90101+ (Pylaiella littoralis U1_48)back to top |