mRNA_P-littoralis_Contig685.23.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig685.23.3 vs. uniprot
Match: A0A6H5K6I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I9_9PHAE) HSP 1 Score: 202 bits (514), Expect = 1.120e-57 Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 3
Query: 609 QDILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEAPVPAATGPATVVNPYAPSK 992
Q ILEHRF +RAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSG+DF SDYR++IMLAV++AE AENVRARSRNS AVLCPRYI+VEPL+A PVVEAPVPAA G +T+VNPYA SK
Sbjct: 237 QIILEHRFKDVRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGNDFIDSDYRSRIMLAVTQAEAAENVRARSRNSPNAVLCPRYISVEPLAAAPVVEAPVPAAQGSSTIVNPYASSK 364
BLAST of mRNA_P-littoralis_Contig685.23.3 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 194 bits (492), Expect = 1.150e-50 Identity = 101/120 (84.17%), Postives = 109/120 (90.83%), Query Frame = 3
Query: 633 AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEAPVPAATGPATVVNPYAPSK 992
AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYR +IMLAV++A AENVR+RSRNS AVLCPRYI+VEPL+A PVVE VPAA G +T+VNPYA SK
Sbjct: 917 AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRGRIMLAVTQAVAAENVRSRSRNSPNAVLCPRYISVEPLAATPVVETSVPAAQGSSTIVNPYASSK 1036
BLAST of mRNA_P-littoralis_Contig685.23.3 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE) HSP 1 Score: 145 bits (367), Expect = 3.360e-34 Identity = 70/88 (79.55%), Postives = 75/88 (85.23%), Query Frame = 1
Query: 169 NFVLFGAGLPMQGSTRTPDRTASAGNQRRHTTPSLSTQAWEESRGAPRQRVEDSDSAATPASIAVEHFGFLGWTWRDKHMGSKLPLCL 432
++ G+ LPMQGST TPDR A AG+QRRHTTPSLSTQAWEESRGA RQRVEDSDSAATPASIA EHFG+LGW WR H GSKLPLCL
Sbjct: 47 GLIINGSVLPMQGSTHTPDRPARAGSQRRHTTPSLSTQAWEESRGARRQRVEDSDSAATPASIAEEHFGYLGWKWRGNHFGSKLPLCL 134
BLAST of mRNA_P-littoralis_Contig685.23.3 vs. uniprot
Match: A0A6H5KEF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF8_9PHAE) HSP 1 Score: 135 bits (339), Expect = 9.810e-32 Identity = 65/76 (85.53%), Postives = 67/76 (88.16%), Query Frame = 1
Query: 205 GSTRTPDRTASAGNQRRHTTPSLSTQAWEESRGAPRQRVEDSDSAATPASIAVEHFGFLGWTWRDKHMGSKLPLCL 432
GST TPDR A AG+QRRHTTPSLSTQAWEESRGA RQRVEDSDSAATPASIA EHFG+LGW WR H GSKLPLCL
Sbjct: 74 GSTHTPDRPARAGSQRRHTTPSLSTQAWEESRGARRQRVEDSDSAATPASIAEEHFGYLGWKWRGNHFGSKLPLCL 149
BLAST of mRNA_P-littoralis_Contig685.23.3 vs. uniprot
Match: D7G2I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I2_ECTSI) HSP 1 Score: 135 bits (340), Expect = 3.160e-31 Identity = 66/78 (84.62%), Postives = 68/78 (87.18%), Query Frame = 1
Query: 199 MQGSTRTPDRTASAGNQRRHTTPSLSTQAWEESRGAPRQRVEDSDSAATPASIAVEHFGFLGWTWRDKHMGSKLPLCL 432
MQGST TPDR A AG+QRRHTTPSLSTQAWEESRGA RQRVEDSDS ATPASIA EHFG+LGW WR KH SKLPLCL
Sbjct: 1 MQGSTHTPDRPARAGSQRRHTTPSLSTQAWEESRGARRQRVEDSDSEATPASIAEEHFGYLGWKWRGKHFCSKLPLCL 78
BLAST of mRNA_P-littoralis_Contig685.23.3 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 122 bits (307), Expect = 1.800e-26 Identity = 63/108 (58.33%), Postives = 78/108 (72.22%), Query Frame = 3
Query: 609 QDILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVE 932
QD++EH F H+R GLG+ RNPTAAQAKER RGD+ RGLHG RAN+NRNAR G DF S YRA++ML V E E + +RAR+++S AVL P YI+V A PV +
Sbjct: 659 QDVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIRARTKDSDEAVLSPWYISVAAPGATPVAD 766
BLAST of mRNA_P-littoralis_Contig685.23.3 vs. uniprot
Match: A0A6H5L2C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C2_9PHAE) HSP 1 Score: 114 bits (284), Expect = 2.230e-26 Identity = 57/98 (58.16%), Postives = 73/98 (74.49%), Query Frame = 3
Query: 609 QDILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITV 902
+D +EHRF H R GLG+ RNPTA QAKER+ RGDLNRGL GGSRAN NR +R G+DF S R +I+L V++ E + +RA SRN + AV+ PRY++V
Sbjct: 66 RDPVEHRFGHTRQGLGSHRNPTATQAKERAARGDLNRGLQGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSV 163
BLAST of mRNA_P-littoralis_Contig685.23.3 vs. uniprot
Match: A0A6H5K630_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K630_9PHAE) HSP 1 Score: 102 bits (255), Expect = 9.480e-23 Identity = 63/122 (51.64%), Postives = 78/122 (63.93%), Query Frame = 3
Query: 639 IRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEA-----PVPAATGPATVV-NPYAP 986
+R GLG+ RNPTA QAKER+ RGDLNRGL GGSRAN NR +R G DF S R +I+L V++ E + +RA SRN + AV+ RY++V A P VE PA+ G VV N YAP
Sbjct: 1 MRQGLGSHRNPTATQAKERAARGDLNRGLRGGSRANHNRTSRKGSDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFSRYLSVVKPRADPTVEGGASQESTPASAGQTPVVFNSYAP 122
BLAST of mRNA_P-littoralis_Contig685.23.3 vs. uniprot
Match: A0A6H5K5X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X1_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.180e-21 Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 3
Query: 612 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVV 929
DI EHR+ H+ GLG+ NPT A+AKER+ RGDL R LHG SRA N+NAR G+DF S R +I+L V++AE + +RA S+N + AV+ PRYI+++ A PVV
Sbjct: 530 DIEEHRYGHMHQGLGSHSNPTCAEAKERAERGDLQRSLHGVSRAKHNQNARKGEDFIASGIRGRIILPVTDAERSATMRAPSKNPASAVMFPRYISIDKPHADPVV 635
BLAST of mRNA_P-littoralis_Contig685.23.3 vs. uniprot
Match: A0A6H5KB63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB63_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 9.090e-21 Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 3
Query: 639 IRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVE 905
+R LG+ NP AAQAKER+ RGDL R LHG SRAN N+NAR G+DF S R +IML V++AE + +RA SRN AV+ PRYI+++
Sbjct: 1 MRQSLGSHSNPIAAQAKERTARGDLQRSLHGVSRANHNKNARKGEDFIASGIRGRIMLPVTDAERSATMRAPSRNPVSAVMFPRYISID 89 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig685.23.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig685.23.3 >prot_P-littoralis_Contig685.23.3 ID=prot_P-littoralis_Contig685.23.3|Name=mRNA_P-littoralis_Contig685.23.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=185bp MFFFVILCLRVTQPGTFASGRRPIVPSWTRYVVSNLCRIVAACTLNPPPSback to top mRNA from alignment at P-littoralis_Contig685:107140..110160+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig685.23.3 ID=mRNA_P-littoralis_Contig685.23.3|Name=mRNA_P-littoralis_Contig685.23.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=3021bp|location=Sequence derived from alignment at P-littoralis_Contig685:107140..110160+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig685:107140..110160+ >mRNA_P-littoralis_Contig685.23.3 ID=mRNA_P-littoralis_Contig685.23.3|Name=mRNA_P-littoralis_Contig685.23.3|organism=Pylaiella littoralis U1_48|type=CDS|length=555bp|location=Sequence derived from alignment at P-littoralis_Contig685:107140..110160+ (Pylaiella littoralis U1_48)back to top |