prot_P-littoralis_Contig685.2.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig685.2.2
Unique Nameprot_P-littoralis_Contig685.2.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length395
Homology
BLAST of mRNA_P-littoralis_Contig685.2.2 vs. uniprot
Match: D7FK13_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK13_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 3.690e-89
Identity = 188/390 (48.21%), Postives = 241/390 (61.79%), Query Frame = 0
Query:    1 MLRLVYLVFLYCWYGG-SLSSIKE----------DLPGE----------GSDKRSAATSSPAPARDSPSEGDSRSRGKIPPPGPVAGSQLQHLPTSPPAVALENANR---GAPFSSEQGRSGARDVRRDDEIREEHQLKRVSIVDKITPLTVLTSLVSDFDLAADWYFFKDGLEGQPQLLYIFALAFTVIGTIMYILLTLEFHPISKVQGWWV-GKSPGPLQHVSLGWQLAINVIVEDIPQLVITWIASPDSVAGALNIATAGFSLLTKIAEAVATRRDLPMSSQLRMVEEDPGVVRHMMVERRNLEKLAASAAKLAVHVNKCRQES-------DSERQRALAFEVMQLDPGLLSGSLTYIREKLDVPALDLARSGLTGPIPSTLGDLTQ 358
            MLRL YL  LY WY   S ++IK           +L GE           S + S A++ PA       +G  R+ G     G    +  +    SP  V    A +   G+PF+   G S   D+RR         LKR +I +K+TPLTVLTS+VSD DL ADWYF ++GLE   +L+   A   TV+GT+MY+LLTLEFHP+S+   W   G++  PLQHV LGWQL +NV+VEDIPQLVITW+ SP SVAG LNIATAGF+LL K+AE  ATR DLPMSSQLRM++ DPGVV+H++  R   E+LAA+AA LAV VN+   E+       +S+R  A AF+VMQ+DPG L+G L YIREKL+V  L+L R GL G +P +LGD+ Q
Sbjct:    1 MLRLAYLACLYLWYDFCSWTNIKHRASQGQTCVGELSGEHTRVDEEDHGASAQASLASALPADLVKRKRQGQYRTHGTT---GSSRHAGAKRNSASPFEVCPSPAGQDSMGSPFTDAGGNS--EDLRR--------TLKRSAIWEKVTPLTVLTSVVSDLDLFADWYFLQEGLEDAQELVADVAFVLTVVGTVMYVLLTLEFHPVSEAWTWCRRGRALSPLQHVPLGWQLLLNVVVEDIPQLVITWVTSPTSVAGVLNIATAGFALLAKMAEGFATRTDLPMSSQLRMIDTDPGVVQHLLNARHKAEELAANAASLAVLVNRFGAENAAMPTERNSKRLLATAFQVMQVDPGFLNGELGYIREKLEVSRLNLGRFGLKGSLPPSLGDVLQ 377          
BLAST of mRNA_P-littoralis_Contig685.2.2 vs. uniprot
Match: D7G1J8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J8_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 1.660e-50
Identity = 107/250 (42.80%), Postives = 151/250 (60.40%), Query Frame = 0
Query:  114 LKRVSIVDKITPLTVLTSLVSDFDLAADWYFFKDGLEGQPQLLYIFALAFTVIGTIMYILLTLEFHPISKVQGWWVGKSPGPLQHVSLGWQLAINVIVEDIPQLVITWIASPDSVAGALNIATAGFSLLTKIAEAVATRRDLPMSSQLRMVEEDPGVVRHMMVERRNLEKLAASAAKLA--VHVNKCRQESDSERQRALAFEVMQLDPGLLSGSLTYIREKL-DVPALDLARSGLTGPIPSTLGDLTQLK 360
            LKR +I+ +ITP+ +L+S V D DL  DW F K GL GQ  L+   AL F ++GT+M+ L T EF  +SK++  W G     LQHV LGWQL  NV +ED+PQ +IT I  P SV G LN+  +G SL  KI    +++R   +S+Q +M+++DP V R++   R   +K A +A KL      N+C   S  E++ A  F+V+Q+DP  + G L Y+R  L     L +  S LTGPIPS +GD+T L+
Sbjct:  154 LKRRTILSRITPIVLLSSFVGDLDLITDWTFLKYGLAGQGFLIRKLALFFAIVGTVMWALSTTEFSLMSKLKNMWKGNPLSRLQHVGLGWQLLANVFLEDVPQFIITVITRPTSVTGVLNLCASGLSLCAKIVHGYSSQRAPSLSTQFKMIDQDPAVTRNLFKLRDEAKKKAKAAEKLVYLAWANRC---STGEQKAAAVFQVLQMDPTFVGGDLEYMRADLFSGSRLYITASSLTGPIPSQVGDMTILR 400          
BLAST of mRNA_P-littoralis_Contig685.2.2 vs. uniprot
Match: A0A6H5JNU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU7_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 8.030e-31
Identity = 72/172 (41.86%), Postives = 104/172 (60.47%), Query Frame = 0
Query:  114 LKRVSIVDKITPLTVLTSLVSDFDLAADWYFFKDGLEGQPQ-----------LLYIFALAFTVIGTIMYILLTLEFHPISKVQGWWVGKSPGPLQHVSLGWQLAINVIVEDIPQLVITWIASPDSVAGALNIATAGFSLLTKIAEAVATRRDLPMSSQLRMVEEDPGVVRHM 274
            LKR +I+ +ITP+ +L+S V D DL  DW F K GL GQ +           L+   AL F ++GT+M+ L T EF  +SK++  W       LQHV LGWQL  NV +ED+PQ +IT I  P SV G LN+  +G SL  KI   ++++R   +S+Q +M+++DP V R++
Sbjct:  204 LKRRTILSRITPIVLLSSFVGDLDLITDWMFLKYGLAGQGENTKAEGCLQRFLIRKLALFFAIVGTVMWALSTTEFSLMSKLKNMWK-----VLQHVGLGWQLLANVFLEDVPQFIITVITRPTSVTGVLNLCASGLSLCAKIIHGISSQRAPSLSTQFKMIDQDPAVTRNL 370          
BLAST of mRNA_P-littoralis_Contig685.2.2 vs. uniprot
Match: A0A836CEJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ4_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.740e-6
Identity = 31/79 (39.24%), Postives = 52/79 (65.82%), Query Frame = 0
Query:  112 HQLKRVSIVDKITPLTVLTSLVSDFDLAADWYFFKD-----GLEGQPQLLYIF--ALAFTVIGTIMYILLTLEFHPISK 183
            +++K+  I  K+ PLTV+ S+ +D D A+DW FF D     G    P ++ ++  ALAFTV+GT++++L+  EFHP++ 
Sbjct:   36 NEMKKRIIDKKLDPLTVIASIAADLDAASDWAFFYDLGHRSGGAAYPHVMRMYKAALAFTVVGTLIWLLVWSEFHPVAS 114          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig685.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FK13_ECTSI3.690e-8948.21Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
D7G1J8_ECTSI1.660e-5042.80Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JNU7_9PHAE8.030e-3141.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CEJ4_9STRA2.740e-639.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 338..393
e-value: 5.6E-7
score: 29.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 297..395
e-value: 6.9E-17
score: 63.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..107
NoneNo IPR availablePANTHERPTHR46662DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEINcoord: 280..395
NoneNo IPR availablePANTHERPTHR46662:SF32LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATEDcoord: 280..395
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 337..395

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig685contigP-littoralis_Contig685:20406..37573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig685.2.2mRNA_P-littoralis_Contig685.2.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig685 20381..37573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig685.2.2 ID=prot_P-littoralis_Contig685.2.2|Name=mRNA_P-littoralis_Contig685.2.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=395bp
MLRLVYLVFLYCWYGGSLSSIKEDLPGEGSDKRSAATSSPAPARDSPSEG
DSRSRGKIPPPGPVAGSQLQHLPTSPPAVALENANRGAPFSSEQGRSGAR
DVRRDDEIREEHQLKRVSIVDKITPLTVLTSLVSDFDLAADWYFFKDGLE
GQPQLLYIFALAFTVIGTIMYILLTLEFHPISKVQGWWVGKSPGPLQHVS
LGWQLAINVIVEDIPQLVITWIASPDSVAGALNIATAGFSLLTKIAEAVA
TRRDLPMSSQLRMVEEDPGVVRHMMVERRNLEKLAASAAKLAVHVNKCRQ
ESDSERQRALAFEVMQLDPGLLSGSLTYIREKLDVPALDLARSGLTGPIP
STLGDLTQLKELRLARNGLSGPIPSTLGDLTQLTKLGLSGNDLTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf