prot_P-littoralis_Contig682.29.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig682.29.1
Unique Nameprot_P-littoralis_Contig682.29.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length179
Homology
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BLAST of mRNA_P-littoralis_Contig682.29.1 vs. uniprot
Match: D8LPX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX3_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 5.040e-10
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0 
Query:  110 DRMRQSTKPAIQDVKPWIRKSLKLEVDGNGDCYCTSWVLIILLWAVQSEDRLVFLEAKL-DSCYGG 174
            ++M   T+P ++DVKPW   S+ + VD  G+CY +SW LI++LWAVQS  RL  L  KL D C  G
Sbjct:   78 EQMSNYTRPVVEDVKPWCDGSVMVVVDNCGNCYSSSWFLIVILWAVQSPGRLRDLMGKLQDGCLEG 143
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BLAST of mRNA_P-littoralis_Contig682.29.1 vs. uniprot
Match: A0A6H5K680_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K680_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.350e-8
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0 
Query:  110 DRMRQSTKPAIQDVKPWIRKSLKLEVDGNGDCYCTSWVLIILLWAVQSEDRLVFLEAKL-DSCYGG 174
            ++M   T+  ++DVKPW   S+ + VD  G+CY +SW LI++LWAV+S  RL  L  KL D C  G
Sbjct:   88 EQMSNYTRSVVEDVKPWCDGSVMVVVDNCGNCYSSSWFLIVILWAVESPGRLRDLMGKLQDGCLEG 153
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig682.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPX3_ECTSI5.040e-1048.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K680_9PHAE1.350e-845.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig682contigP-littoralis_Contig682:147610..148505 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig682.29.1mRNA_P-littoralis_Contig682.29.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig682 147610..148505 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig682.29.1 ID=prot_P-littoralis_Contig682.29.1|Name=mRNA_P-littoralis_Contig682.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=179bp
MNGNGASCSRNRLQNVDDRETAAAEAAVKSSVRGGTVKCGGGGKTPAPVA
GKTTGRAQVEVPKSAAIPDRVVAAAGKEAQVATERSERAAGADQSSSKER
KLTMLINDEDRMRQSTKPAIQDVKPWIRKSLKLEVDGNGDCYCTSWVLII
LLWAVQSEDRLVFLEAKLDSCYGGAFRRV
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