prot_P-littoralis_Contig682.18.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig682.18.5
Unique Nameprot_P-littoralis_Contig682.18.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length837
Homology
BLAST of mRNA_P-littoralis_Contig682.18.5 vs. uniprot
Match: A0A6H5JCP1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP1_9PHAE)

HSP 1 Score: 415 bits (1066), Expect = 1.370e-134
Identity = 244/405 (60.25%), Postives = 287/405 (70.86%), Query Frame = 0
Query:  444 MLKVLLSIRRVHLKLHVGVNIRRKRLAVAKIVWFLTTGNGGAKARPRKVIHAFMYQVRRCQRAAKEWLACRAASVEAVCRLWDRIEKEIRRGLGDELDRAKALWMKNTLRTGADSEMHGKWRELKASTI-----TRSLMARIDRLETQIDRQQKRDKAARVLAARAMLNKRLPVGGVTRGKRRVVQMDSAEDLRTSTVASGKRLAIVHSSLHAKFSLHLQGGSRRIARPGNKVIGEMDARLLVQGEFPVALPDESSEGAGAPT-------VRSTKRARALIYTGDLGRSWQQIVEDTVMQDFRRNAFARKDSMPYLKYSVTLSMDMMAATGNVEGPSVAFAA---------APSVSASTNADGTNGDYNNNGPVALDGLGVVGRSST-LEQSRRLRRDVSAGGAG 826
            M KVLLSIRRVHL+L++G+NIRRK++AV K+ WFL TG+GG KARPRKVI AFMYQVRRCQRAA+EWLACRAA++EAVCRLWDRIE EIRRGLGDELDRAK +W+KN LRTG DS +HG+WRELKAS       T       D      D  Q+  +A R + A A        G     +     MDSAE+LRTSTV+S KRLA++ SSL+AKFSLH QGG RR+ R GN+VIGEMDAR++++GEFP A P + SEGA A T       VRSTKR+RALIYTGDLGRSWQQIVEDTVMQDFRRNAFARKDSMPYL+YSV LS+DMMAATGN +GPS +  A          P+  A+T         N +G  AL    +   +S+ LEQ RR  R+ SAGG G
Sbjct:    1 MFKVLLSIRRVHLRLYMGMNIRRKQMAVTKMQWFLATGSGGPKARPRKVIRAFMYQVRRCQRAAREWLACRAATIEAVCRLWDRIESEIRRGLGDELDRAKRVWVKNALRTGEDSHIHGQWRELKASEDQEPGGTNRSPRGADGAPA--DAGQEGPRAGREVDAEASER-----GNPGPQEGHAGLMDSAENLRTSTVSSSKRLAMIRSSLNAKFSLHQQGG-RRVERTGNRVIGEMDARMVIRGEFPDAPPGDGSEGAAARTSSAALTVVRSTKRSRALIYTGDLGRSWQQIVEDTVMQDFRRNAFARKDSMPYLQYSVVLSLDMMAATGNTDGPSASAMAXXXXXXXXXVPTGDATT--------ANGSGRDALRRASIGSTASSGLEQRRRRGREGSAGGGG 389          
BLAST of mRNA_P-littoralis_Contig682.18.5 vs. uniprot
Match: D8LJ78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ78_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 1.250e-102
Identity = 234/467 (50.11%), Postives = 288/467 (61.67%), Query Frame = 0
Query:   20 DANANRGMDEVPPTTKKAAQKLTNFRAYLQKSSVAGCFVDLLEMTSEGVMTEAGLYPSSRYKESRDMRQAGLGRRSRVRHPVGISGGLHNNNHAPDNPXXXXXXXXXXXXXXXXXXXXXXPXXHRVPXXXXXXXXGRRRQRPSTAVGTPNPPMLAH-TPDAPLTSRVA-DPGRCLAGAGTGVIAFSTSRSAKSGGGDEGGSSSRVSTLDIKRTKWLRGDAKVEEGGWLEAGITGQPQLEEATAGGA-----PETSGDTQG---EGRNGG-NDWSGNRDVDAADGAAQRWSGNTASAGRVLPPSVPRVAWGNAMRELTTTVTKVTQMKVAAARAVTHSADERRLRAAKARAVLIEGEKLRAQELLSKNENRKQMAIEAAALAASQRGLLGVITLVLATKRLWAEGLKLSQQHERDAEVAVAAKVVQRAFKAYTSRRMLKVLLSIRRVHLKLHVGVNIRRKRLAVAKIV 475
            +A A    ++V P TKKAAQKLTNFR YL KSSVAGCFVDLL+MT EGVMTEAGLYPSSRYK+SR+MRQ+GLG  SR R P G++G   N N     P                          R P        G   +RPSTA+ T + P+ A  T DAPL++RV    G   A A    I  ++S S  +    E  + SR + LDI+RT+W+ G +K   GGWLEA   GQ Q  +    GA     PET+ D +    EGRNGG +D +G    D   G     S  + S      P   RVAWG AMREL+++VTKV  MK AA RA+ +S+ +RR RAA  RA LIEGE LRAQ  L+KNENRK+ A EAAALAASQRGLL  I+LV+ATKRLWA  LKLSQ  E    + +AA VVQRA+KAYT+RRM KVLL+IRRVHL+L++G+NIRRK++  + +V
Sbjct:    2 EAGACSNPEDVQPATKKAAQKLTNFRGYLHKSSVAGCFVDLLQMTDEGVMTEAGLYPSSRYKQSRNMRQSGLGTSSRSRPPTGLNGP--NKNDKSQAPLQGPSNNQAEDQRKN----------QRQPR-------GHHGRRPSTALETHSAPLAAQLTRDAPLSARVGLSAGNSFAEAAGSRILSASSPSCHNNNKSEDIAGSRATILDIRRTQWVEGGSKQGVGGWLEADTAGQSQQHQGQLVGAVSATGPETNDDAEEGEKEGRNGGGHDENGG---DHPGGRCNTSSTTSTSTADSPKPFSRRVAWGKAMRELSSSVTKVAHMKTAADRAMINSSHDRRARAASVRAGLIEGELLRAQAALAKNENRKRRATEAAALAASQRGLLEAISLVVATKRLWAGSLKLSQDREHLVHLGIAATVVQRAYKAYTNRRMFKVLLAIRRVHLRLYIGMNIRRKQMVRSAVV 446          
BLAST of mRNA_P-littoralis_Contig682.18.5 vs. uniprot
Match: D8LJ77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ77_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 3.540e-84
Identity = 151/210 (71.90%), Postives = 173/210 (82.38%), Query Frame = 0
Query:  517 SVEAVCRLWDRIEKEIRRGLGDELDRAKALWMKNTLRTGADSEMHGKWRELKASTITRSLMARIDRLETQIDRQQKRDKAARVLAARAMLNKRLPVGGVTRGKRRVVQMDSAEDLRTSTVASGKRLAIVHSSLHAKFSLHLQGGSRRIARPGNKVIGEMDARLLVQGEFPVALPDESSEGAGAPT-------VRSTKRARALIYTGDLGR 719
            S+EAVCRLWDRIE EIRRGLGDELDRAK +WMKN LRTG DS +HG+WRELKA T  RSL+ARIDRLE Q++RQQ RDK ARV AAR+ML +R    GVTRG R+V QMDSAE+LRTSTV+S KRLAI+ SSL+AKFSLH QGG RR+ R GN+VIGEMDAR++++GEFP A PD+ SEGA A T       VRSTKR+RALIYTGDLGR
Sbjct:   34 SIEAVCRLWDRIESEIRRGLGDELDRAKRVWMKNALRTGEDSHIHGQWRELKAKT--RSLVARIDRLEAQMERQQTRDKKARVQAARSMLKRR---SGVTRGHRKVTQMDSAENLRTSTVSSSKRLAIIRSSLNAKFSLHQQGG-RRVERTGNRVIGEMDARMVIRGEFPDAPPDDGSEGAAAGTSSAAISVVRSTKRSRALIYTGDLGR 237          
BLAST of mRNA_P-littoralis_Contig682.18.5 vs. uniprot
Match: A0A6H5JK95_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK95_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 2.030e-62
Identity = 196/433 (45.27%), Postives = 239/433 (55.20%), Query Frame = 0
Query:   20 DANANRGMDEVPPTTKKAAQKLTNFRAYLQKSSVAGCFVDLLEMTSEGVMTEAGLYPSSRYKESRDMRQAGLGR--RSRVRHPVGISGGLHNN-NHAPDNPXXXXXXXXXXXXXXXXXXXXXXPXXHRV--PXXXXXXXXGRRRQRPSTAVGTPNPPMLAH-TPDAPLTSRVA-DPGRCLAGAGTGVIAFSTSRSAKSGGGDEGGSSSRVSTLDIKRTKWLRGDAKVEEGGWLEAGITGQPQLEEATAGGA-----PETS-GDTQG--EGRNGGNDWSGNRDVDAADGAAQRWSGNTASAGRVLPPSVPRVAWGNAMRELTTTVTKVTQMKVAAARAVTHSADERRLRAAKARAVLIEGEKLRAQELLSKNENRKQMAIEAAALAASQRGLLGVITLVLATKRLWAEGLKLSQQHERDAEVAVAAKVVQRAFK 437
            +A A    ++V P TKKAAQKL NFR         GC       T+ GVMTEAGLYPSSRYK+SR+MRQ+GLG   RSR R P  ++G   N+ + AP                         P  ++V           G   +RPSTA+ TP+ P+ A  T DAPL++RV    G   A A  G      S         E  + SR + LDI+RT+W+ G++K   GGWLEA   G+ Q  +    GA     PET+ G  +G  EGRNG              G  +  S  + S      P   RVAWG AMREL+++VTKV  MK AA RA+ +S+ ERR RAA  RA LIEGE LRAQE L+KNENRK+ A EAAALAASQRGLL  ITLV+ATKRLWA  LKLSQ  E  A + VAA VVQRA+K
Sbjct:    8 EAGACSNPEDVQPATKKAAQKLANFR---------GC-----SSTASGVMTEAGLYPSSRYKQSRNMRQSGLGSSSRSRSRPPTRLNGRRKNDKSQAP----------------------LQGPSNNQVGDQSKNQRQQRGHHGRRPSTALETPSAPLAAQPTRDAPLSARVGLSAGNSFAEA-AGARTLGASSPTCDNNKSEDIAGSRATILDIRRTQWVEGESKQGVGGWLEADTAGRSQQHQGQRVGAVSATGPETNDGAEEGDKEGRNGXXXXX--XXXXXXXGRCKTSSTTSTSTADSPKPFSRRVAWGKAMRELSSSVTKVAHMKTAADRAMINSSHERRARAASVRAGLIEGELLRAQEALAKNENRKRQATEAAALAASQRGLLEAITLVVATKRLWASSLKLSQDREDLAHLGVAATVVQRAYK 401          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig682.18.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JCP1_9PHAE1.370e-13460.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LJ78_ECTSI1.250e-10250.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJ77_ECTSI3.540e-8471.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK95_9PHAE2.030e-6245.27Reverse transcriptase domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 573..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..145
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 111..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig682contigP-littoralis_Contig682:84568..96182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig682.18.5mRNA_P-littoralis_Contig682.18.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig682 84132..96311 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig682.18.5 ID=prot_P-littoralis_Contig682.18.5|Name=mRNA_P-littoralis_Contig682.18.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=837bp
MSGAGRSPRVQQTMLRIKADANANRGMDEVPPTTKKAAQKLTNFRAYLQK
SSVAGCFVDLLEMTSEGVMTEAGLYPSSRYKESRDMRQAGLGRRSRVRHP
VGISGGLHNNNHAPDNPPSNQIEDDQLQQQQQQQQQQQQPQQHRVPQRHQ
QRRWGRRRQRPSTAVGTPNPPMLAHTPDAPLTSRVADPGRCLAGAGTGVI
AFSTSRSAKSGGGDEGGSSSRVSTLDIKRTKWLRGDAKVEEGGWLEAGIT
GQPQLEEATAGGAPETSGDTQGEGRNGGNDWSGNRDVDAADGAAQRWSGN
TASAGRVLPPSVPRVAWGNAMRELTTTVTKVTQMKVAAARAVTHSADERR
LRAAKARAVLIEGEKLRAQELLSKNENRKQMAIEAAALAASQRGLLGVIT
LVLATKRLWAEGLKLSQQHERDAEVAVAAKVVQRAFKAYTSRRMLKVLLS
IRRVHLKLHVGVNIRRKRLAVAKIVWFLTTGNGGAKARPRKVIHAFMYQV
RRCQRAAKEWLACRAASVEAVCRLWDRIEKEIRRGLGDELDRAKALWMKN
TLRTGADSEMHGKWRELKASTITRSLMARIDRLETQIDRQQKRDKAARVL
AARAMLNKRLPVGGVTRGKRRVVQMDSAEDLRTSTVASGKRLAIVHSSLH
AKFSLHLQGGSRRIARPGNKVIGEMDARLLVQGEFPVALPDESSEGAGAP
TVRSTKRARALIYTGDLGRSWQQIVEDTVMQDFRRNAFARKDSMPYLKYS
VTLSMDMMAATGNVEGPSVAFAAAPSVSASTNADGTNGDYNNNGPVALDG
LGVVGRSSTLEQSRRLRRDVSAGGAGGGRVMLEPIL*
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