mRNA_P-littoralis_Contig681.38.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig681.38.2 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 530 bits (1366), Expect = 3.100e-165 Identity = 288/454 (63.44%), Postives = 339/454 (74.67%), Query Frame = 3
Query: 1830 MATDMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGGCTYLTACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLGLAGIAVLNAKADDMKAMLEGISKDLDIVMTIVPKPPPKVATVPNGTPAQKSWHVERRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTAAAEFVRSPKALETFADGVVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGF 3191
M D+SD+AAEAAR+AL +GST+ D VS DLGEELPVIKPV KTLK IR VETVK NRE+L +LE CTY+TAC +VKCR S +DV PL DCVE A+ F ERC SRR +VS +KA SD EIAGLN+ VDRLT DLGLAGIAVL K DDMK L+ I + L+ + P+ K+A VP G P +KSWHVERR M VL+AL G + L G SGSGKTT AAE VRS + E F+DG+VWL VN+GAK+RLPSLMLQLARMVHE+IGGS+GR P A++D A YIK+R+E GH G+ LKCLVVADNVWE++VVSKL+ETGM VLLSTRDE ++ S GKAV VD LS+ DAESVL+R AELP E RLPDDAVDLI+LCG VAMD+AFVGRWSTVRGRHD A+WS AA IR E+ V D + + + KRR+A+L GF
Sbjct: 1 MVADISDSAAEAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIESE-VDVAPLKDCVEAAKNFAERC-SRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLESL----PRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGF 448
BLAST of mRNA_P-littoralis_Contig681.38.2 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 507 bits (1305), Expect = 3.110e-156 Identity = 272/472 (57.63%), Postives = 337/472 (71.40%), Query Frame = 3
Query: 1830 MATDMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPV-------IKPVLKTLKFIREKVETVKKNREDLRSLEGGCTYLTACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLGLAGIAVLNAKADDMKAMLEG-----------ISKDLDIVMTIVPKPPPKVATVPNGTPAQKSWHVERRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTAAAEFVRSPKALETFADGVVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGF 3191
MA S AAAE ++ L MGS VD ++FM +LGE+LP ++PVLKTL IRE VE V+ N+E+L++L C YLTACV+VK RQ S MD+TP+ +C+E A + VERCG R +++ + ASSD EIA + A + L DL LAG+A+L K D+ AM+E I + + ++ + K P K+A +P TP +KSWHVER VM V EALT GGP L GL G SGSGKTTAA+E VRS + + F+DGVVWL+VN GAK+RLPSLMLQLA M+ E++GG RRP +DDGAAYIKE+++ GHGGKGLKCLVVADNVWEKEVV KLLETGM VLLSTRDE L+ GS G+ VGVD +S+ +AESVLR+ +ELPPE RLPDDAVDLIELCG VAMDLAFVGRWSTVRGR D+ AWS AA K+R E+G + G+ SG V ++ RR+AVL AGF
Sbjct: 1 MAAKSSGAAAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRG-KMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVGG---RRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGF 468
BLAST of mRNA_P-littoralis_Contig681.38.2 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 494 bits (1271), Expect = 5.260e-151 Identity = 269/473 (56.87%), Postives = 325/473 (68.71%), Query Frame = 3
Query: 1830 MATDMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGGCTYLTACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLGLAGIAVLN---------------AKADDMKAMLEGISKDL----DIVMTIVPKPPPKVATVPNGTPAQKSWHVERRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTAAAEFVRSPKALETFADGVVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGF 3191
MA ++DA E A++A MGS DV+ F+ DLGEELP+++PVL+TL+ IREKVETVK+N EDL L CTY+TAC IVKCR + +DV PL DCV KFVER +R ++S +KA D G+I L R+ L GDL LAGIA L A + M EG ++L + ++ +PKPP KVA VP GTP KSWHVERR V V +AL GGP L GL G SG+GKTTAA+ V S ETF+DG+VWL VN+G + LP LMLQLA+MV EDIGGS+GRRP +DDG AY+K+++ENGHGGKGLKCLVVADNVWE +VVS+LLETGM +LLSTRDE L+ ++G+ VGVD LS+ +AESVLRR AEL PE RLPDDA DLIELCG VAMDLAFVGRWSTVRGR D+ AWS AA K+R E+ + S DS RR A+L AGF
Sbjct: 1 MAAYVADATGEVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTE-LDVAPLEDCVNAVEKFVERY-RKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGF 471
BLAST of mRNA_P-littoralis_Contig681.38.2 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 464 bits (1194), Expect = 6.120e-142 Identity = 257/447 (57.49%), Postives = 315/447 (70.47%), Query Frame = 3
Query: 1887 GSTVVDVVSFMGDLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGGCTYLTACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLGLAGIAVLNAKADDMKAMLEGI--------SKDL---DIVMTIVPKPPPKVATVPNGTPAQKSWHVERRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTAAAEFVRSPKALETFADGVVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAV-GVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGF 3191
G+ DV++F+ + + LP+I+PVLKTLK + +L CTY+T CVIV+CR+ SSG+ TPL++CV FVERC SRR +S +KA+ D EIAGL R++ L GDL LAGIA + K +D+KA+LE + S+ L DI+ V P +ATVP GTPA+KSWHVERR VM AV +AL G GGPRL GL G SGSGKTTAAAE VRS + E F+DG+VWLSVN GA ERL +LM+ LAR+V EDIGGS+GRRP DDGAAY ++R+++GHGGKGLKCLVVADNVWE+ V+SKLLETGM VLLSTRDE L+ + G V GVD LS+ DA SVLRR +EL PE+RLPD+AV+L+ELCG VAMD+AFVGRWSTVRGR D+ AWS AA K+R +I S NV D RR+AVL AGF
Sbjct: 6 GTMASDVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKG-SSGLKATPLMECVNAVGAFVERC-SRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIER---SRVSDNVWDIRAVRRKAVLQAGF 447
BLAST of mRNA_P-littoralis_Contig681.38.2 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 399 bits (1024), Expect = 6.490e-121 Identity = 224/407 (55.04%), Postives = 267/407 (65.60%), Query Frame = 3
Query: 1977 IREKVETVKKNREDLRSLEGGCTYLTACVIVKCRQ-QPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLGLAGIAVLNAKADDMKAMLEGISKDLDIVMTIVPKPPPKVATVPNGTPAQKSWHVERRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTAAAEFVRSPKALETFADGVVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRRPVAADDGA-AYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGF 3191
+RE VETV + R++L +LE CTY+TAC+I K R P S +V+PL DCV +A KFVER R + + A + + + +I++ +PKPP K A VP GTP +KSWHVER V V+EALTG GPRL GL G SG+GKTTAAAE VRS E+F+DG+VWL+VN GA +RLPSLMLQLARMV EDIGG +G P + A AYIK+R+ENGHGGKGLKCL VADNVWEKEVVS LL+TGM+VLLSTR E L+ G+ G V +D LS DAESVLR AELPP VRLPDDAVDLI+LCG VAMDLAFVGRWSTVRGRHD+ AWS AA K+R EI + GD V + RR+A+L AG
Sbjct: 1 MRETVETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVERRKKR-------------------------------------TMEQMVQNQAAARKELLANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVERH-VTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGDDI---VDGARGNRRKAILQAGL 366
BLAST of mRNA_P-littoralis_Contig681.38.2 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 404 bits (1038), Expect = 7.130e-119 Identity = 233/465 (50.11%), Postives = 295/465 (63.44%), Query Frame = 3
Query: 1830 MATDMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGGCTYLTACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLGLAGIAVLNAKADDMKAMLEGISK-----------DLDIVMTIVPKPPPKVATVPNGTPAQKSWHVERRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTAAAEFVRSPKALETFADGVVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGF 3191
MA + S AAAE ++AL MGS VD ++F+ DL E+LP +N+E+L++L C +LT CVIVK RQ S MDV+P+ +C+E A + VERCG R +++ + ASSD +IA + A + L +L LAG+A+L K D++A +E ++K + +I+ + K P K A +P TP KSWHVER V+ V E LT GGP L GL G SGSGKTTAA+E VRS + +RLPSLMLQLA MV+E+IGG RRP +DDG AYIKER+ GHGG+GLKCL V DNVWEKEVV +LLE GM VLLSTRDE L+ G G+ V V+ LS+ +AESVLR+ AELPPE RLPDDAVDLIELCG VAMDLAF GR STVRGR D+ AWS AA K+R E+ + G V ++ RR+AV+ AGF
Sbjct: 1 MAAESSGAAAEVTKLALKMGSATVDSITFVADLCEDLPF-------------------ENQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRG-KMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEIGG---RRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVETRDARRKAVVQAGF 423
BLAST of mRNA_P-littoralis_Contig681.38.2 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 357 bits (917), Expect = 3.500e-102 Identity = 189/303 (62.38%), Postives = 226/303 (74.59%), Query Frame = 3
Query: 2283 NAKADDMKAMLEGISKDLDIVMTIVPKPPPKVATVPNGTPAQKSWHVERRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTAAAEFVRSPKALETFADGVVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGF 3191
N +A + +LE SK LD M + K K+ VP GTPA+KSW+V+RR VM V E L GGPRL GL G SGSGKTT A+E VRS + E F+DG+ WLSVN GAKERL SLMLQLAR+V+EDIG S+GRRP ++DD AAYI++R++ G GGK LKCLVVADNVWEKEVVSKLLETGM VLLSTR+ L+ + G+ VGVD LS+ DA SVLRR AELPP+ ++P DAVDLIELCG VAMDLAFVGRWSTVRGR D+ AWS A K+REE+G V S + ++ RR+A+L AGF
Sbjct: 3 NKQAASQERILENQSKILDH-MDQLSKTQAKLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDARRKAILRAGF 304
BLAST of mRNA_P-littoralis_Contig681.38.2 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 350 bits (898), Expect = 1.150e-99 Identity = 222/473 (46.93%), Postives = 279/473 (58.99%), Query Frame = 3
Query: 1845 SDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGGCTYLTACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLGLAGIAVLNAKADDMKAMLEGISKDLDIVMTIVPKPPPKVATVPNGTPAQKSWHVERRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTAAAEFV------------------RSPKALETFADGVVWLSVNQG--AKERLPSLMLQLARMVHEDIGGSMGRRPVAADDG--AAYIKERIENGHGGKGLK-CLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVG-DSSKKRREAVLSAGF 3191
S A EAARV L MGST D+V F +LG E+PV+ VLKTLK IR + E V+ N E L++LE CTY+TACVIVK RQ SS M+V PL CV A F+ RC SRR KASSD E+ LN+RVD LTGDLGLAGIA L+AK DD+KAML + I +P P VA VPNG P + SWHV R +V+ AV E L+ G P++ GL G SGSGKTT AA V R + E F DGVVWL V +G + ER+P+LM QLA+ V ED+ S G P A+ G +A+I + + G K CLVVAD+VWE +++ +L TGM VL ++RD L+ G V VD LSK +AE +LR AEL LP A +IE C +A L FVGRWSTV+G D+ W+ A I E+ + G++ + D S +R A+L AGF
Sbjct: 49 SGAPEEAARVFLKMGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARC-SRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEV-----IAQNTMPASVP-VAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGF 514
BLAST of mRNA_P-littoralis_Contig681.38.2 vs. uniprot
Match: D7G5K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K4_ECTSI) HSP 1 Score: 314 bits (804), Expect = 1.070e-93 Identity = 184/318 (57.86%), Postives = 224/318 (70.44%), Query Frame = 3
Query: 1830 MATDMSDAAAEAARVALTMGSTVVDVVSFM--GDLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGGCTYLTACVIVKCRQ--QPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLGLAGIAVLNAKADDMKAML--------EGISKDL----DIVMTIVPKPPPKVATVPNGTPAQKSWHVERRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTAAAEFVRSPKALETFADGVVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRRPVAADDGA-AYIKERI 2732
M T +SDAA EAA +AL MGST VD++SF+ GD G ELPV+ VLKTL +RE VETV++NR++L +LE CTY+TA VIVK RQ QP SG+DVTPL DCV A KF ERC RR + +KA S E+A LNAR+DRL GDLGLAGIA + + D+K M+ K+L +IV+ +PKPP K A +P GTP +KSWHVERR VM V+EALTG GP L GL G SG+GKTTAA+E V S E+F+DG+VWL+VN GA +RLPSLMLQLARMVHEDIGG +G RP + D A AYIK+R+
Sbjct: 1 MVTTLSDAAVEAANLALKMGSTAVDMISFVHRGD-GGELPVVGTVLKTLTAMRETVETVQQNRDELAALEKRCTYMTASVIVKFRQIPQPGSGLDVTPLKDCVVVAEKFAERCKKRRMRWE-IVKAFSVKDELATLNARIDRLVGDLGLAGIATVLGEVADLKGMMLEQMVSDQAAAQKELLANQEIVIDRLPKPPTKKADIPQGTPMRKSWHVERRHVMDTVVEALTGEAGPHLVGLVGDSGAGKTTAASELVGSNVVRESFSDGIVWLAVNYGANKRLPSLMLQLARMVHEDIGGCVGGRPNESGDNADAYIKQRM 316
BLAST of mRNA_P-littoralis_Contig681.38.2 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 244 bits (622), Expect = 1.170e-61 Identity = 161/434 (37.10%), Postives = 233/434 (53.69%), Query Frame = 3
Query: 1923 DLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGGCTYLTACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLGLAGIAVLNAKADDMKAMLEGISKDLDIVMTIVPKPPPKVATVPNGTPAQKSWHVERRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTAAAEFV--RSPKALETFADGVVWLSVNQ--GAKERLPSLMLQLARMVHEDIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRH----DQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKK--RREAVLSAGFR 3194
++G PV+ P+ L + V+ +N+E+L L C +T VI K + +S +DV PL +CV+ ++ ER R +++ + D +I L R++ + +GL+G+ K D + A L+ P PK+A VP P KS+HV R V+ V + L G GGP +A L G SG+GKTT+AA V R + F DGVVWL V + G +RLPSLM LA+ +HED+ P DDG +Y+++ + + L+CLVVAD+VWE VV KL ETGM VLL+TR + G + V +D L +AE VLR AELP RL D ++ ++E+CG VAMD AFVG W++VR + AW ++ +I +V G GN G+ + + R AVL AGF+
Sbjct: 32 EIGASAPVVAPLCTALLKAKGVVDAASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRG-RLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQILARLQ---------------PGPKLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPTG-DDGVSYVRKIVSQ----EKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEM--GEPEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFK 442 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig681.38.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig681.38.2 >prot_P-littoralis_Contig681.38.2 ID=prot_P-littoralis_Contig681.38.2|Name=mRNA_P-littoralis_Contig681.38.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=457bp MATDMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKFIback to top mRNA from alignment at P-littoralis_Contig681:140523..157599+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig681.38.2 ID=mRNA_P-littoralis_Contig681.38.2|Name=mRNA_P-littoralis_Contig681.38.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=17077bp|location=Sequence derived from alignment at P-littoralis_Contig681:140523..157599+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig681:140523..157599+ >mRNA_P-littoralis_Contig681.38.2 ID=mRNA_P-littoralis_Contig681.38.2|Name=mRNA_P-littoralis_Contig681.38.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1371bp|location=Sequence derived from alignment at P-littoralis_Contig681:140523..157599+ (Pylaiella littoralis U1_48)back to top |