mRNA_P-littoralis_Contig681.31.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig681.31.1
Unique NamemRNA_P-littoralis_Contig681.31.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig681.31.1 vs. uniprot
Match: A0A6H5KL54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL54_9PHAE)

HSP 1 Score: 615 bits (1586), Expect = 1.200e-214
Identity = 295/376 (78.46%), Postives = 334/376 (88.83%), Query Frame = 2
Query:  281 RRASFLRGRVDSAKAEELLAGLGFNVDEQARSSPTKRPKSGRRRRRQEDSNAIRSADWATTAAAPGDAAGKEDLRFLDAADFRVPAEDRLAFERNGHSVTRGIFSSEQLKALRPTIVEAFELQEMDALRQKVSVWFGDETASGLETAPQLRARLKRLAPEEIPFLQVFNMFRKDGPCRETIERVVLSARLAHVAAQLLGCERVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPLDDVPARKDGGSPLVFASRSHRDFALNHWQDSRLREDLTGRYPKKNHAPLSVGDITWHHGWILHSSPGNTRDESRVALAVSYFRDGTRLLSDSAGRAPDPEDKWSYGDWVRDLPAGGVVEHSAVPLVWDGGRPL 1408
            R A+ LRGRVDSAKAEELLAGLGFNVDE+ARS    + +  RR+R   ++ AIR A+WA TA     A  ++ L FL+AADF VPAEDRLAFERNGH+VTRG+FSS+QL ALRP+IV+AFELQEM+ALRQKVSVWFGD+ AS LETAPQLRARLKRL PEE+PFLQVFNMFRKDGP RETIERVVLS RLAH+AAQLLGC+R+RLYQDSTFCKRPGDG TRWHSDLNMAPLDCNDFVTAWIPL+++PA+++GGSPLVFASRSHRDFALNHW+DSRLREDLTGRY +K+HAPL+ GDITWHHGW LHSSPGN R+  RVALAVSYFRDGT LLSD+AGR+PDPEDKWSYGDWV DLP GGVV+H +VPLVW+GGRP+
Sbjct:   24 REATRLRGRVDSAKAEELLAGLGFNVDEEARSKGNGQQRGRRRKRAGGNNEAIRDAEWAPTAPR---ADIQKGLTFLEAADFDVPAEDRLAFERNGHAVTRGVFSSKQLNALRPSIVQAFELQEMNALRQKVSVWFGDDDASELETAPQLRARLKRLTPEEVPFLQVFNMFRKDGPFRETIERVVLSPRLAHIAAQLLGCQRLRLYQDSTFCKRPGDGQTRWHSDLNMAPLDCNDFVTAWIPLEEIPAKREGGSPLVFASRSHRDFALNHWRDSRLREDLTGRYREKDHAPLAAGDITWHHGWTLHSSPGNRRETRRVALAVSYFRDGTCLLSDTAGRSPDPEDKWSYGDWVGDLPVGGVVKHPSVPLVWNGGRPV 396          
BLAST of mRNA_P-littoralis_Contig681.31.1 vs. uniprot
Match: D7FZY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY1_ECTSI)

HSP 1 Score: 397 bits (1021), Expect = 3.010e-132
Identity = 177/207 (85.51%), Postives = 194/207 (93.72%), Query Frame = 2
Query:  788 MFRKDGPCRETIERVVLSARLAHVAAQLLGCERVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPLDDVPARKDGGSPLVFASRSHRDFALNHWQDSRLREDLTGRYPKKNHAPLSVGDITWHHGWILHSSPGNTRDESRVALAVSYFRDGTRLLSDSAGRAPDPEDKWSYGDWVRDLPAGGVVEHSAVPLVWDGGRPL 1408
            MFRKDGP RETIERVVLS RLAHVAAQLLGC+RVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPL++VPA+++GGSPLVFASRSHRDFALNHW+DSRLREDL+GRY +K+HAPL+ GDITWHHGW LHSS GN R+  RVALAVSYFRDGT LLSD+AGR+PDPEDKWSYGDWV DLP GGVV+H +VPLVWDGGRP+
Sbjct:    1 MFRKDGPFRETIERVVLSPRLAHVAAQLLGCQRVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPLEEVPAKREGGSPLVFASRSHRDFALNHWRDSRLREDLSGRYREKDHAPLAAGDITWHHGWTLHSSLGNRRETPRVALAVSYFRDGTCLLSDTAGRSPDPEDKWSYGDWVGDLPVGGVVKHPSVPLVWDGGRPV 207          
BLAST of mRNA_P-littoralis_Contig681.31.1 vs. uniprot
Match: A0A835YLJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLJ4_9STRA)

HSP 1 Score: 302 bits (773), Expect = 9.570e-93
Identity = 153/330 (46.36%), Postives = 196/330 (59.39%), Query Frame = 2
Query:  497 DLRFLDAADFRVPAEDRLAFERNGHSVTRGIFSSEQLKALRPTIVEAFELQEMDALRQKVSVWFGDETASGLETAPQLRARLKRLAPEEIPFLQVFNMFRKDGPCRETIERVVLSARLAHVAAQLLGCERVRLYQDSTFCKRPGDGPTRWHS----------------------DLNMAPLDCNDFVTAWIPLDDVPARKDGGSPLVFASRSHRDFALNHWQDSRLREDLTGRYPKKNHAPLSVGDITWHHGWILHSSPGNTRDESRVALAVSYFRDGTRLLSDSAGRAPDPEDK---------WSYGDWVRDLPAGGVVEHSAVPLVWD 1393
            D+ FL+ A   V   + L FER GH +TRG+FS++++  L P I+  F   E+ AL+QKV+V  G+  A    +A  L   L++L P+EIPFLQVFNM+R  G     +  +V S RLA  AA LLGC+ VR+YQDSTF KR GDGPT WHS                      DLNMAP D ND VTAW+PL  + A +DGGS LVFASRSHRDFALN+WQD   +EDL+ RY +     +  GD +WHHGW+LHS+ GN   E+RVA  VSY  DG R+L + A   P+ E           WSY DW+ D   G   +H  +P+ +D
Sbjct:   33 DMNFLNVAQ-PVTCAEMLKFERGGHLLTRGLFSAQEMALLSPHIMAGFRALELSALQQKVTVLLGEGAAPPGASAEDLLVLLRQLPPDEIPFLQVFNMWRTPGAHAAAVSALVRSRRLARHAAALLGCQAVRVYQDSTFVKRSGDGPTNWHSGINAQLWAAAAAPLRRHERNRGDLNMAPFDTNDMVTAWLPLTHIAACEDGGSGLVFASRSHRDFALNYWQDPHAQEDLSERYDETPQLAMEPGDCSWHHGWVLHSANGNDTPETRVAFTVSYIADGARMLGEGAEHYPEQEXXXXXXXXXXTWSYSDWIADTCPGEPADHPFLPVAFD 361          
BLAST of mRNA_P-littoralis_Contig681.31.1 vs. uniprot
Match: A0A7S2SR24_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR24_9STRA)

HSP 1 Score: 276 bits (706), Expect = 9.940e-83
Identity = 150/301 (49.83%), Postives = 184/301 (61.13%), Query Frame = 2
Query:  530 VPAEDRLAFERNGHSVTRGIFSSEQLKALRPTIVEAFELQEMDALRQKVSVWFGDETASG------LETAPQLRARLKRLAPEEIPFLQVFNMFRKDGPCRETIERVVLSARLAHVAAQLLGCERVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPLDDVPARKDGGSPLVFASRSHRDFALNHW-QDSRLREDLTGRYPK--KNHAPLSVGDITWHHGWILHSSPGNTRDESRVALAVSYFRDGTRLLSDSAGRAP-DPEDKWSYGDWVRDLPAGGVVEHSAVPLVWDGGR 1402
            +P +  LAFER GH  TRG+ S++++ +LR  + EAF  +E +A      V  GDE          LET  +    L+    E +PFLQVFN +R+D    E     V   RLA VAAQLLG  RVRLYQDS F KRPGDG TRWHSDL+MAP D ND VT WIPLD VPA++DGG+ L FAS SHRDFAL  W +     +D + RY     +H  L  GD TWHHGW+LHSSP N   + R+AL VS+  DG RL  ++      D ED+ SY DWV ++P G  VEH+ VPLV  GGR
Sbjct:   82 LPTDTVLAFEREGHIATRGLLSTQEMASLRGPVEEAFRRREFEAWFHSARVMLGDENLVDDFGLPLLETTEECIEALEAHGCE-LPFLQVFNSWREDPAVAE----FVCGPRLAAVAAQLLGVSRVRLYQDSMFLKRPGDGATRWHSDLHMAPFDTNDLVTCWIPLDPVPAQEDGGTGLTFASGSHRDFALAFWSRPHETGKDFSARYDDCLASHGALDPGDATWHHGWVLHSSPPNDSPDRRLALTVSFVADGARLRDEAHHEVDIDDEDRTSYEDWVSEVPPGAPVEHAMVPLV-GGGR 376          
BLAST of mRNA_P-littoralis_Contig681.31.1 vs. uniprot
Match: A0A7S2GNK7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GNK7_9STRA)

HSP 1 Score: 249 bits (635), Expect = 5.160e-73
Identity = 142/301 (47.18%), Postives = 171/301 (56.81%), Query Frame = 2
Query:  524 FRVPAEDRLAFERNGHSVTRGIFSSEQLKALRPTIVEAFELQEMDALRQKVSVW-------FGDETASGLETAPQLRARLKRLAPEEIPFLQVFNMFRKDGPCRETIERVVLSARLAHVAAQLLGCERVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPLDDVPARKDGGSPLVFASRSHRDFALNHWQDSRLR-EDLTGRYPKK--NHAPLSVGDITWHHGWILHSSPGNTRDESRVALAVSYFRDGTRLLSDSA---GRAPDPEDKWSYGDWVRDLPAGGVVEHSAVPLV 1387
            + +  E  L FERNGH  TR +    ++K+++ T+  AF L E DA RQ   V        FG       E A   RA L+     E+PFLQ  N++R D P  E I R     +    AAQLLG E VRLYQDS F KR  DGPTRWHSDL+M+PLD N  VT W+ LD VP+++DGGS L FAS SHRDFAL    D R    DLT RY +   +H  L  GD TWHHGW LHSSP N  D  R+A  VS+  DG R+L   A   G   D ED+ SY DW+ DL  G   EH  +P+V
Sbjct:   37 YPLSVERVLEFERNGHICTRCLLEDSEVKSVKQTVESAFLLLEPDAWRQSARVMLEGVEDDFGLPLVKNFEDAADCRAVLEE-HDVELPFLQAMNLWRND-PKVEAIVR-----KFGKTAAQLLGVESVRLYQDSVFYKRVDDGPTRWHSDLHMSPLDTNSMVTMWLALDHVPSQEDGGSALTFASGSHRDFALAFHYDPRDETNDLTERYAEALCDHGELRPGDATWHHGWTLHSSPPNELDSPRLAFTVSFIADGARILGAEALKSGETIDDEDRASYEDWLCDLEPGARAEHRLLPVV 330          
BLAST of mRNA_P-littoralis_Contig681.31.1 vs. uniprot
Match: A0A4D9CRB8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRB8_9STRA)

HSP 1 Score: 243 bits (619), Expect = 4.490e-70
Identity = 125/285 (43.86%), Postives = 172/285 (60.35%), Query Frame = 2
Query:  449 DWATTAAAPGDAAGKEDLRFLDAADFRVPAEDRLAFERNGHSVTRGIFSSEQLKALRPTIVEAFELQEMDALRQKVSVWFGDETASGLETAPQLRARLKRLA-PEEIPFLQVFNMFRKDGPCRETIERVVLSARLAHVAAQLLGCERVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPLDDVPARKDGGSPLVFASRSHRDFALNHWQDSRL--REDLTGRYPKKNHAPLSVGDITWHHGWILHSSPGNTRDESRVALAVSYFRDGTRLLSDSAGR 1294
            DWA + AA      +  L  L+A    +P    L++ER GH++TR + +SE+LK     +  AFE +++ A RQKV V  G E     +T  +    ++    P+ +PFLQ FN +R+     + + R+ L+ R A VAA+LL   RVRLYQDSTF KR GDGPT WHSDLNMAP   N+ VT W+PL  +P  ++GG+ L+FAS SHRDFAL+ W+D+R   R DL GRY   ++  + VGD TWHHGW LHSS  N  +E R+A  + +  DG  +L    G+
Sbjct:   97 DWAWSLAA------QRSLPSLEAPYPPIPTTQLLSWEREGHTLTRSLCTSEELKDYAKVVRAAFEREKLAAFRQKVRVLLGPEAFQDCQTLEECEEVMEEYVDPDAVPFLQTFNGWRQF----QDVRRLALAKRFARVAAELLNVPRVRLYQDSTFLKRVGDGPTLWHSDLNMAPFHTNEAVTMWLPLTPIPPEEEGGTGLLFASGSHRDFALSFWEDARGGGRRDLEGRYALDSYGRMEVGDATWHHGWCLHSSGPNDLEEDRMAFTLCFVADGAEMLEGGEGK 371          
BLAST of mRNA_P-littoralis_Contig681.31.1 vs. uniprot
Match: R1DNY2_EMIHU (Uncharacterized protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DNY2_EMIHU)

HSP 1 Score: 241 bits (615), Expect = 7.100e-70
Identity = 138/289 (47.75%), Postives = 166/289 (57.44%), Query Frame = 2
Query:  548 LAFERNGHSVTRGIFSSEQLKALRPTIVEAFELQEMDALRQKVSVWFGDETASGLE----TAPQ-LRARLKRLAPE-EIPFLQVFNMFRKDGPCRETIERVVLSARLAHVAAQLLGCERVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPLDDVPARKDGGSPLVFASRSHRDFALNHWQ-DSRLREDLTGR-YPKKNHAPLSVGDITWHHGWILHSSPGNTRDESRVALAVSYFRDGTRLLSDSAGRAPDPEDKWSYGDWVRDLPAGGVVEHSAVPLVW 1390
            L FER GH  TR +       AL   +   +  +E +ALRQKV V  GD+  +  E     +P  LR  L+   PE  +PF+Q+FN++R      E       S  LA  AA LLG ERVRLYQDS F KRPGDGPT WHSDL+MAPLD N FVT W+PL DV A  DGGS LVFAS SHRD ALN W  D R   D + R YP ++   L  GD TWHHGW+LHS+  N  D  R A+AVS++ DG   L   A R+   ED  S   W+ D+  G    H  +PLVW
Sbjct:    2 LEFERTGHVRTRKLLPGAATSALSKEVDRLYTERESEALRQKVRVLLGDDRLARAEHKSAASPHVLRRILREELPEGAVPFMQLFNLWRTSPMVHELWR----SPALAGTAASLLGVERVRLYQDSYFLKRPGDGPTHWHSDLSMAPLDTNSFVTCWLPLHDVAAPDDGGSSLVFASGSHRDVALNFWHGDPRRPVDASTRGYPLRDGGALRAGDATWHHGWVLHSAAPNMGDVPRRAVAVSFYADGASRLQ-GALRSQHDEDAESCVAWLGDVRPGRAARHRWLPLVW 285          
BLAST of mRNA_P-littoralis_Contig681.31.1 vs. uniprot
Match: Q01H68_OSTTA (Phytanoyl-CoA dioxygenase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q01H68_OSTTA)

HSP 1 Score: 238 bits (606), Expect = 5.450e-68
Identity = 139/367 (37.87%), Postives = 195/367 (53.13%), Query Frame = 2
Query:  299 RGRVDSAKAEELLAGLGFNVDEQARSSPTKRPKSGRRRRRQEDSNAIRSADWATTAAAPGDAAGKEDLRFLDAADFRVPAEDRLAFERNGHSVTRGIFSSEQLKALRPTIVEAFELQEMDALRQKVSVWFGDETASGLETAPQLRARLKRLAPEEIPFLQVFNMFRKDG-PCRETIERVVLSARLAHVAAQLLGCERVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPLDDVPARKDGGSPLVFASRSHRDFALNHWQDSRLREDLTGRYPKKNHAPLSVGDITWHHGWILHSSPGNTRDE-SRVALAVSYFRDGTRLL-SDSAGRAPDPEDKWSYGDWVRDLPAGGVVEHSAVPLVW 1390
            RG+    K E+  AG      +    + T R + G R      S  +R+    T+A A  D +    + F D  +  V  E++L +ER GH   R      ++  +   +      + ++A R +VSV   D   + L+   + +  LK+ + E++ FLQ FN+ R +  P RE I    +S + A +AA+L+GCER R+YQ   F K PG   T WHSDLNM PLD NDFVT WIPL  +    +  + L FA+RSHRDFAL +W+      DL GRY    +  L +GD+T HHGW LH SP   +D   R AL+V YF DG R L ++   R P  ED+WSY  W+RDL  G V +H  +P+VW
Sbjct:   41 RGKQRDFKNEQRAAGGAEKTRQDTPRATTSRSERGVRA-----SEVLRAVAPRTSAKAFEDVSRGTTVLFDDPRE--VTLEEQLHYEREGHVCIRRAVEGVEMIPMVKAVTGEIIARRLEAYRHRVSVLCPDARTTELKDVEECKRALKKHSQEDVGFLQTFNLHRNESSPAREYI----MSKQFAKIAAELMGCERARIYQSCVFVKEPGMAETNWHSDLNMVPLDTNDFVTLWIPLRSLD---EDDAALHFANRSHRDFALPYWRTIEGMSDLEGRYEIDTYDELDLGDLTAHHGWALHWSPPQPKDSVPRYALSVCYFADGARRLETEELRRTPHAEDEWSYETWLRDLQPGAVAKHFELPIVW 393          
BLAST of mRNA_P-littoralis_Contig681.31.1 vs. uniprot
Match: A0A383W4J6_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W4J6_TETOB)

HSP 1 Score: 234 bits (596), Expect = 3.330e-67
Identity = 125/296 (42.23%), Postives = 172/296 (58.11%), Query Frame = 2
Query:  527 RVPAEDRLAFERNGHSVTRGIFSSEQLKALRPTIVEAFELQEMDALRQKVSVWFGD--ETASGLETAPQLRARLKRLAPEEIPFLQVFNMFRKDGPCRETIERVVLSARLAHVAAQLLGCERVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPLDDVPARKDGGSPLVFASRSHRDFALNHWQDSRLREDLTGRYPKKNHAPLSVGDITWHHGWILHSSPGNTRDE-SRVALAVSYFRDGTRLLSDSAGRAPD-----PEDKWSYGDWVRDLPAGGVVEHSAVPLVW 1390
            R+P    L FER G  +T+G+   +QL+ ++  I +  + ++++ALR +V V   D  +    + +  Q  A +++    E+ FLQ FN+ R +G     I  +V S +LA  AAQLL  +++RLYQD  F K PG   T WHSDL MAPLD NDFVTAWIPL  V    +G S L+FA  SHRDFAL  W D + R+     YP ++  P+ VGD++WHHGW LH +P    D   R+ALAVSYF DG RLL+    ++        ED  SYG W+  +  G VV H  +PLV+
Sbjct:   50 RLPDRSLLQFERKGWVLTQGLLPQQQLQQVKGCIEQVVQQRKLEALRHRVRVLCSDCQDQLGSIRSEAQALALIQQHGSSELGFLQFFNLHRSEG----LIAELVRSKQLAATAAQLLAAKKLRLYQDCVFLKEPGYAETNWHSDLRMAPLDANDFVTAWIPLRPVGGA-EGDSGLLFAEGSHRDFALPFWHDLKGRDLGDRSYPLQDAGPMQVGDVSWHHGWTLHCAPPQPPDTPQRLALAVSYFADGARLLARKRDKSVHRHMLHDEDAESYGGWLAGMKDGAVVRHEQLPLVY 340          
BLAST of mRNA_P-littoralis_Contig681.31.1 vs. uniprot
Match: A0A7S1NK13_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NK13_9EUGL)

HSP 1 Score: 228 bits (580), Expect = 1.680e-66
Identity = 110/212 (51.89%), Postives = 134/212 (63.21%), Query Frame = 2
Query:  758 EEIPFLQVFNMFRKDGPCRETIERVVLSARLAHVAAQLLGCERVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPLDDVPARKDGGSPLVFASRSHRDFALNHWQDSRLREDLTGRYPKKNHAPLSVGDITWHHGWILHSSPGNTRDESRVALAVSYFRDGTRLLSDSAG-RAPDPEDKWSYGDWVRDLPAGGVVEHSAVPLVW 1390
            E +PF+Q+FN++++    R    R  LS RL  +AAQ+LG   VRLYQDS F KRPGDGPT WHSDLNMAP D NDFVT WIPL  +P   +GGS L FASRSHRD AL  W D R   DL+ RY  + +    VGD + HHGW LHS+PGN   ++R A  VSY  D    L D    R PD ED+ SY  W  D+  GG+ +H  +PLV+
Sbjct:   10 EPVPFMQLFNVWKESPEAR----RFALSRRLGSIAAQVLGVPAVRLYQDSVFAKRPGDGPTEWHSDLNMAPFDTNDFVTFWIPLQPIPYSDEGGSSLCFASRSHRDVALPFWSDPRTT-DLSDRYEVETYGEFKVGDCSLHHGWCLHSAPGNELPDTRYAYTVSYVADCAPTLQDEGHVRRPDMEDRRSYRSWFADVGWGGIADHPELPLVY 216          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig681.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL54_9PHAE1.200e-21478.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZY1_ECTSI3.010e-13285.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YLJ4_9STRA9.570e-9346.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SR24_9STRA9.940e-8349.83Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2GNK7_9STRA5.160e-7347.18Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9CRB8_9STRA4.490e-7043.86Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
R1DNY2_EMIHU7.100e-7047.75Uncharacterized protein n=3 Tax=Emiliania huxleyi ... [more]
Q01H68_OSTTA5.450e-6837.87Phytanoyl-CoA dioxygenase n=2 Tax=Ostreococcus tau... [more]
A0A383W4J6_TETOB3.330e-6742.23Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7S1NK13_9EUGL1.680e-6651.89Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig681contigP-littoralis_Contig681:107457..112915 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FZY1
PFAMsPhyH
Model size2114
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
Exons8
Evalue8.09e-137
EggNOG OGs29XGT@1|root,2RXRT@2759|Eukaryota
DescriptionPhytanoyl-CoA dioxygenase (PhyH)
Cds size1302
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig681.31.1prot_P-littoralis_Contig681.31.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig681 107587..112233 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791418.1620278-UTR-P-littoralis_Contig681:107456..1075861680791418.1620278-UTR-P-littoralis_Contig681:107456..107586Pylaiella littoralis U1_48UTRP-littoralis_Contig681 107457..107586 +
1680791418.2699096-UTR-P-littoralis_Contig681:112233..1129151680791418.2699096-UTR-P-littoralis_Contig681:112233..112915Pylaiella littoralis U1_48UTRP-littoralis_Contig681 112234..112915 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791418.17462-CDS-P-littoralis_Contig681:107586..1076621680791418.17462-CDS-P-littoralis_Contig681:107586..107662Pylaiella littoralis U1_48CDSP-littoralis_Contig681 107587..107662 +
1680791418.1846194-CDS-P-littoralis_Contig681:108961..1092511680791418.1846194-CDS-P-littoralis_Contig681:108961..109251Pylaiella littoralis U1_48CDSP-littoralis_Contig681 108962..109251 +
1680791418.1957965-CDS-P-littoralis_Contig681:109539..1096781680791418.1957965-CDS-P-littoralis_Contig681:109539..109678Pylaiella littoralis U1_48CDSP-littoralis_Contig681 109540..109678 +
1680791418.2126591-CDS-P-littoralis_Contig681:109998..1101411680791418.2126591-CDS-P-littoralis_Contig681:109998..110141Pylaiella littoralis U1_48CDSP-littoralis_Contig681 109999..110141 +
1680791418.2229073-CDS-P-littoralis_Contig681:110452..1105591680791418.2229073-CDS-P-littoralis_Contig681:110452..110559Pylaiella littoralis U1_48CDSP-littoralis_Contig681 110453..110559 +
1680791418.2339025-CDS-P-littoralis_Contig681:110957..1112351680791418.2339025-CDS-P-littoralis_Contig681:110957..111235Pylaiella littoralis U1_48CDSP-littoralis_Contig681 110958..111235 +
1680791418.244164-CDS-P-littoralis_Contig681:111688..1118151680791418.244164-CDS-P-littoralis_Contig681:111688..111815Pylaiella littoralis U1_48CDSP-littoralis_Contig681 111689..111815 +
1680791418.2559965-CDS-P-littoralis_Contig681:112091..1122331680791418.2559965-CDS-P-littoralis_Contig681:112091..112233Pylaiella littoralis U1_48CDSP-littoralis_Contig681 112092..112233 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig681.31.1

>prot_P-littoralis_Contig681.31.1 ID=prot_P-littoralis_Contig681.31.1|Name=mRNA_P-littoralis_Contig681.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=434bp
MVAAIAFATAATALLSGVEYLNSPADGQDSFSSRRGLGACCRRPHRGKAG
RRASFLRGRVDSAKAEELLAGLGFNVDEQARSSPTKRPKSGRRRRRQEDS
NAIRSADWATTAAAPGDAAGKEDLRFLDAADFRVPAEDRLAFERNGHSVT
RGIFSSEQLKALRPTIVEAFELQEMDALRQKVSVWFGDETASGLETAPQL
RARLKRLAPEEIPFLQVFNMFRKDGPCRETIERVVLSARLAHVAAQLLGC
ERVRLYQDSTFCKRPGDGPTRWHSDLNMAPLDCNDFVTAWIPLDDVPARK
DGGSPLVFASRSHRDFALNHWQDSRLREDLTGRYPKKNHAPLSVGDITWH
HGWILHSSPGNTRDESRVALAVSYFRDGTRLLSDSAGRAPDPEDKWSYGD
WVRDLPAGGVVEHSAVPLVWDGGRPLLRSDRSS*
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mRNA from alignment at P-littoralis_Contig681:107457..112915+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig681.31.1 ID=mRNA_P-littoralis_Contig681.31.1|Name=mRNA_P-littoralis_Contig681.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5459bp|location=Sequence derived from alignment at P-littoralis_Contig681:107457..112915+ (Pylaiella littoralis U1_48)
GTTAGATGTCATAGTCTTTGCAGTGAAATGTGGGTCGACACAAACGCCCA AACCAACACCAGATAAGGCTGCCTTTTAGTAAACGAGGTAGCGAGACCTG CTGTCAATTGTCGGCTGCTCCTGCTTGGAGATGGTGGCTGCCATCGCGTT CGCCACCGCAGCTACTGCTCTGCTGTCGGGCGTGGAATATTTGAATTCTC CTGCAGGTGAAACATGTTCAACCATCTAACTGAGTCTGCACTTACAGCAG CAGCGGAGTGTAGCTCACCTCCCTACTTAGACTGGTATCGTTGATTGGAG TGCTCTCAGCGCCCCAGTATTATAAGACAGCCCTTTGCGCCAGACTTGGA GCGTTACCATCAGCCCACGATGCCCTCGTTCGACTGAATTCACAAACCGA TACCATCTACAAGAATGCGTCAAAATGATCAAGAGCTCCATCACAGAGTT GTGCTGCTGGTGCCATCGGTTTGCGGAGTTTTCTTGTTTTTCCAGAACAC GGCATTGGCCACCAGTCTTCCCTCTGACACGCCGATCCCATTGATTTTCA AACAGAAGTCCTTTATGTCCGCAGCAGCAGGTACCTGGTACGTACCTGGT GCGTGTGTGTGTTTTGTGTTCATCAAATTTTTCTGGGTACCAGTATCCCG GTATACCTTTCGGTATGAAGTGGGTGCACCAGCCGGGGTCACACAGAAGG AAGGTTCACGCGCGCTTAGCTATGACGGATAAACTCAAATCTTCTTTGCT TTCTGTAGCTGAGGTGAACCCCTCCCGCTGGCAGCGGCGAAAGTTGCATG CTACTTATCATACCATATGATACTACAAGTATGCATGATACTCGTATGAA AAGGTAGGCGCACCTGGTTCGTTCAGGCCCGAAAAAGCATGTTGAGTTAT GATGTATATGATGGGGGGCAATCCTGCGACGTGTGTGTTGTGTGTGCGTT GTCATCCCCATCCACGCACTCTTGACGCCAGTCTACAGCATGCGGTATGA GTTGGGCGCACCAGCCCGGGAGACACACGGGGAAGGTCGACGTGCGACAC TAATTCAAAAGAAGTTGCAAGGACCAAGAGGGTCGTATACCGCCGTACGA TACCGCGGGGGGTCGCATGGACCGATTTTCAAAGCTCGAATACTCCATCG AAAGAAGAGTGTGCGGATGTCGGTGCTGCGCTGCGTTCAAAAAGGGTCGT AAAAATGAAGGGGGGGTCATCGATCAGCGCTGAACTGAAAACTCTGCCGC CGAGATCGTTCCCAAAACGCCAACTGCAGTAAACATCGTTTGCTGTCGGC ATGGCTCATAGTCTCTTATAATATTCGTTGTGGAAGTGGAGCCGTATACA AATGACAGTTAATCAAGCTTTGAAAACGAAAAAAACGGGCCCAAGATGTT CGGTATCTAACGCAATCGACGGTAGACGGCTCACGACTCGTACCACCCCT GTACAGCAGTGACCCGAAACAGTGCATTGATCTGTCTTGACCACATACAT ACCAGACGGGCAAGATTCCTTCTCATCACGGCGAGGATTGGGAGCTTGCT GTCGTCGACCCCACCGGGGCAAGGCCGGGCGTCGGGCGTCTTTTCTGAGA GGTAGGGTGGACAGCGCTAAAGCCGAAGAACTACTCGCCGGGCTAGGCTT CAACGTGGACGAGCAGGCGCGATCATCGCCGACCAAGCGGCCAAAGAGCG GACGCCGAAGACGACGCCAAGAGGACAGCAATGCCATTCGGAGTGCCGAT TGGGCTACGACTGCGGCTGCGCCGGGTGATGCGGCGGGCAAGGAGGTATG TATCGGCTGAAGGGCGAACGCGATGTATCTGCGTATGGAGGAGGGGGACT TTATTTCTGCCTGATTTCGGAGAGCCTTCTTTCTACCGTAATACACGCGG TTTTCTGCGTTTCGCCACGGCGGTGTGTGGGATTCCCGTGGTGTGTATGT ACCTCTTTACTTCAGTTTACATTCAGGATTTTTTTTTTCGCATGCGTAAA TCTATTGCGCGGCTGGTGGACTCTGTCGCTCACGAGATGCGCTGTCGGTT TCATTACCGTTCGTTTCTTGTTGGTTAACTAAGGACTTGAGATTTCTGGA CGCTGCCGACTTTAGAGTGCCTGCGGAAGATCGGCTAGCGTTCGAGAGAA ACGGGCACTCCGTCACGCGCGGTATATTTTCTTCGGAACAGCTCAAGGCA CTGCGTCCGACCATAGTCGAAGGTGACTACACCCAGAGTTCATGCCAAGT ATCACTCATGTCTGGCAGTTTTCTGCTCTTGCGATGCTTCAATACTTGTG ACTGCACAACCCTCACCACAGCACCGCTCTGATGTTGTACGATGTTCCTA CTTTTGTTAGTGAACACTATCATATCGGTTGTTACCTCAGCAAACAGCAC GATTCTGCTTATGGAGAGTCTGAGCATTTTTCATGGGCACAAGGTGTAAC TGGTGCGACAAGCATGTTGGTGCTCTCTCCCCGCGCGTGTCTTTTGCTGT TGCACTCCCCGTCCCACCGCGCGTTCCGTTTGGTCCAACCAGCTTTCGAG CTGCAGGAGATGGACGCGTTGCGCCAAAAGGTTTCCGTCTGGTTTGGCGA CGAGACCGCGTCCGGTCTAGAGACGGCCCCTCAGCTCCGCGCGCGACTGA AACGCCTCGCACCGGAAGAGATTCCTTTCCTTCAGGTACGGAGGCGTGTG CGTGCGAGCTGCTTTTCTACTTCATAACGGCAAAGGCGCGCGCGTTACTC GTCGTTGGGGCACTTCCGATCTCCGGAACGCGGCCTGAGAACATGGATTG TTCCATTTCAGCCGAGGTACAGGGCACCGCTTTTTCAATTTTTATTGCAA GAGGTGTGAAGCGTGTATGTAAGCTTTTTCTTTGTGAACAGAAAACCGCT AAGCACTGCTGTTGCGCTGCTGTTGTTCTTTTGACCATATATCATGTTCT GGGCGCGCAATTGCATGTCTGTTGAAACGCGTCACTGCCGTTCCAGGTGT TCAACATGTTCAGGAAAGACGGGCCTTGTCGAGAAACCATAGAGAGAGTC GTCTTGTCTGCAAGACTCGCGCACGTTGCTGCGCAGCTGCTCGGCTGCGA GCGGTGAGCGGTGCTTGGCTTTCCCGGCGCGTTCTATCGAGCCGTCGAAG TCCCTCAAGAGTCTATCGCATCGTCTACTTTCCTCGATGTATCAATTTCA TCTTGGCGCTCCAAGATTCATGAGTACTGGTACTCCATCGGAAGATAATG TTGGGCAGTTTTCTTTTTTGTGCCGCGTGTTTGACGGTGGGCTCGTTGCG CTCTTCTCCCTCATGGAGTAGATTCGCGAGAAGGCGGGGTCATAGCTTTC ACGCGCTCGATATTGTCCGTCTCGAAAAACTGCCAAAATTGTCGTGTTGA TCTCTTGTTGTGATCATCCATTTGCTTATGCTTGCAGGTCGTCTTCTCTT CTCACACCCTCCGTCCCGTTGACCTTTTCTGGTGGCCACCTTTTGAATCA GGGTGAGGCTTTACCAAGATTCCACGTTCTGCAAGCGACCGGGGGATGGC CCTACGAGATGGCACTCAGATCTGAACATGGCACCGTTAGACTGCAATGA CTTCGTTACCGCGTGGATACCTTTGGACGACGTGCCGGCAAGGAAGGACG GCGGCTCACCCCTGGTCTTCGCAAGCAGATCGCACCGCGATTTCGCCCTC AACCACTGGCAAGATTCCCGGTTACGCGAAGATCTGACGGGAAGATATCC CAAGAAAAACCACGCCCCCCTGTCTGTTGGTAAGCGTTCTACTCAAGTAA CTCCTCGATGGCTGAGTGGCAAGCTTTGGTTTCGAGTTCTTCGAGTGCAC GTTGCTGTCAGCCGACTTTTGCGAAGTGTTGACTATCCTTTTTGCTGATT TGCCAAATGCGAAAGCAAGAGCTTCAGGAGAAGTTCACTGTTCTTTGTGG CGGTATGTGCTCGAGCCCACGTATGTGCTGAACAGTGACATGGAGGTTTG ATACTAGCCCGCGGCACCTTTCGCCTGAGCCAGTGTTGTCGAGTTGATAA TAGAGTTTTTGGCGATCTCTTTCAGGAAACAACAGCACCTTTGTCGATGA GCTTCGGCAACGCCTTTGCAATGCCCCTCACGTCCGAACGAAACACATGT GTCTCCTGCATCGAATGCTCCCTGTGGCGTTCGTGACTGACAACTTGACC ATTCGGTACGACGCACGTGTGGATTGGTGCAGGAGACATTACGTGGCACC ACGGATGGATACTTCACAGCTCTCCGGGCAACACACGAGATGAATCTCGC GTGGCTTTGGCCGTCAGCTATTTTCGGGATGGCACCCGCCTTCTGTCCGA CTCTGCAGGGTGAGTTACCCGAGCCCAGTCTACTGACGATAGAGGGCCAT AGCATTTCGTTTAAAGGCGATGGTTCTCGTGTATCATGCCGCTGTGTGAC GCACCAGCTCCCCAGCGTATTTGTATACCATAACGCTCTGCAAAATTTTG TTTTATTTCAACAGTAAACAAGACTTTTTTACCTCAGAAAAGAATAACCT TGGTGGACGGTTCCGTCGTTGCGATATGTACTCGATAGTTTGGCCGTTCG TGAACTATCATACCCGTTGTTTTTCATCTGTGCAGGAGAGCGCCTGACCC CGAGGACAAGTGGAGCTACGGAGACTGGGTTCGCGACTTGCCTGCAGGGG GCGTTGTCGAGCATTCTGCCGTGCCACTTGTGTGGGACGGCGGGCGACCG CTGCTTAGGTCAGACCGATCAAGTTGAAGCATTCCCCGTCATGAACTTGA TGCTTTTTATCGTTCACTTCTGCTGGCCCTCCACAAAAGGGTGCCTGCCT TTCATTTGGTCGCTGCCGTGACCTGGTCGGTTTCTGGGCGTGCTTGAGAG CATCATACAGGCCCGTCGTCTCGTGTGCACCTGCACATCACCTGACATTT TAGAGACGTCTGCGAAAGCTGGGTCGTCACTCTTGCTTTCCCCGGATTGT TTGTGGAATTTCTAAAACGCGATGGTCTGAATGGATTCAGGAGGCATGGA GAATGGATCTTCTTGACTGGCACACTTGACCAAGACTTTCTGAGTTGCTT GCGACTTATTTCGCGCAACACTACGGAGTCACGATCGCGCCGGGTATTGC CAAACCTGCACGTTGCACGGCTGATGGCGCCTGAAGCGTCGAGCATAATC GGTGCGGAATCCCTGCATCCGGGATACACGTTCTTTCTGTTCTAGCACCC GTTTTGCTTGGAGTGGACCACTATTGTTGAAGACTCGCTGCGCCAGGTGC TCCCAGCTTCATTTCCCGCGTATTCGTTGCCAAAATCTTTTGACACTAGT TGGCCTAACCATTGTCTTCCCTTAATCCATCCTGCGACATTGTGTGCGAG GGAAAGTGAGGTTTCGGCAGTGGTTTAAGCGATACTCTAGGGCTTGCACA AAGATAGGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig681:107457..112915+

>mRNA_P-littoralis_Contig681.31.1 ID=mRNA_P-littoralis_Contig681.31.1|Name=mRNA_P-littoralis_Contig681.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1302bp|location=Sequence derived from alignment at P-littoralis_Contig681:107457..112915+ (Pylaiella littoralis U1_48)
ATGGTGGCTGCCATCGCGTTCGCCACCGCAGCTACTGCTCTGCTGTCGGG
CGTGGAATATTTGAATTCTCCTGCAGACGGGCAAGATTCCTTCTCATCAC
GGCGAGGATTGGGAGCTTGCTGTCGTCGACCCCACCGGGGCAAGGCCGGG
CGTCGGGCGTCTTTTCTGAGAGGTAGGGTGGACAGCGCTAAAGCCGAAGA
ACTACTCGCCGGGCTAGGCTTCAACGTGGACGAGCAGGCGCGATCATCGC
CGACCAAGCGGCCAAAGAGCGGACGCCGAAGACGACGCCAAGAGGACAGC
AATGCCATTCGGAGTGCCGATTGGGCTACGACTGCGGCTGCGCCGGGTGA
TGCGGCGGGCAAGGAGGACTTGAGATTTCTGGACGCTGCCGACTTTAGAG
TGCCTGCGGAAGATCGGCTAGCGTTCGAGAGAAACGGGCACTCCGTCACG
CGCGGTATATTTTCTTCGGAACAGCTCAAGGCACTGCGTCCGACCATAGT
CGAAGCTTTCGAGCTGCAGGAGATGGACGCGTTGCGCCAAAAGGTTTCCG
TCTGGTTTGGCGACGAGACCGCGTCCGGTCTAGAGACGGCCCCTCAGCTC
CGCGCGCGACTGAAACGCCTCGCACCGGAAGAGATTCCTTTCCTTCAGGT
GTTCAACATGTTCAGGAAAGACGGGCCTTGTCGAGAAACCATAGAGAGAG
TCGTCTTGTCTGCAAGACTCGCGCACGTTGCTGCGCAGCTGCTCGGCTGC
GAGCGGGTGAGGCTTTACCAAGATTCCACGTTCTGCAAGCGACCGGGGGA
TGGCCCTACGAGATGGCACTCAGATCTGAACATGGCACCGTTAGACTGCA
ATGACTTCGTTACCGCGTGGATACCTTTGGACGACGTGCCGGCAAGGAAG
GACGGCGGCTCACCCCTGGTCTTCGCAAGCAGATCGCACCGCGATTTCGC
CCTCAACCACTGGCAAGATTCCCGGTTACGCGAAGATCTGACGGGAAGAT
ATCCCAAGAAAAACCACGCCCCCCTGTCTGTTGGAGACATTACGTGGCAC
CACGGATGGATACTTCACAGCTCTCCGGGCAACACACGAGATGAATCTCG
CGTGGCTTTGGCCGTCAGCTATTTTCGGGATGGCACCCGCCTTCTGTCCG
ACTCTGCAGGGAGAGCGCCTGACCCCGAGGACAAGTGGAGCTACGGAGAC
TGGGTTCGCGACTTGCCTGCAGGGGGCGTTGTCGAGCATTCTGCCGTGCC
ACTTGTGTGGGACGGCGGGCGACCGCTGCTTAGGTCAGACCGATCAAGTT
GA
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