mRNA_P-littoralis_Contig681.28.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig681.28.4 vs. uniprot
Match: A0A6H5KL36_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL36_9PHAE) HSP 1 Score: 889 bits (2296), Expect = 1.080e-270 Identity = 899/2152 (41.78%), Postives = 1082/2152 (50.28%), Query Frame = 3
Query: 936 VDASISPSKGRASAPALVLSTRRSSDSTVGITDSPHMLAEGLKTDEEDYSSHRSGDRGGSGGGRAALEAAVIESAETIDTAPPEMAGQVSANRVSAGDENHLSRCESVGGVTTRAGSFCLPGSCAVGGGSPVARARGEAASRGQGGGGGDLDASEIGSEAGLTAVTATDTPAGTCVATAPGRGGRGGSGDVVGRADM-EQVNGDGGGMILGGSMLDAYRELEGNDWEDELEDWRGLPGLQLAAGSGGCAAMRSRLQSPALIFRSGTVDEGDVASLHGRPRSRKPEAVSPAKHGSAWSH-----STAGRTAVADVAEQAPA----VGDGNSEAER---VGPKMVQPRPIRAAGGGGGFQGFNSPDAGAAKSDSEAAKSGRERGGWIGKGGAGG--------QPLLLSLADLTTAGLDKLLHAEGGSKMFFDPDSQRWVGEEVDLSGFEDPNTSSGFEEPINTCSVLSDSAAXXXXXXXXXXXXXXXXXXXXXSGESTSSNPLQSRSPGR-LGSPLPSHAQAGGGNGSPRVSANAHRRWSSGEGFYGPSSRRPSMLSEGARKVMARSIGGGKG----KRSPRSHLRRHTVA-------GVDGGGGVGGSTWDGGVSCPSSASSVGRRASGRIRTRPDSTVSSVASSGLRSESDTGSVLRLYD----DYRGEGGDRRQPQDSWGGTARRADVAALGEEGEDATAAGAADKSWAGS---RNDLVVGGEQLTKSRLAQVFEGAAYASSDGQASRASRSSSMRPNNASPLSRGGGAGSPGPS------WPWIGRSDASSFPVVGME-NSFASGSELGASETSDWDQDADFECLPENQSFNMKLEQPAKFGYSPGAGRFGGGGSGDDSGSAE----MMSPTPGCDDWPPPPVTPGLSRYWTAPASTAP---LQHGEARRC-TMWPMKAS-------ADSSKTAGGGTKHAHPQ-GTHTDNRADSLGSAAEWDRTLEGDLDVSLARRPRTPVAAGLSFSRPTIPG---AGAAPRPTSRPERKSSPDLRQSKFVEAT---GSGRXXXXXXXXXXXXXSALGKSPRSVAGVAWEAFKAHGGGGGSLPATVKAAVTATSIAVEHVRKRTHKRLLLEKGAGAGKRLSGPVQITLQDLQASPSPDKLSLGDGVDDANDDSSQLPVAAASAAAGVRFNRGKMCWEASQSGFEEPDLTGFATTDDESESSRPAGSRRSRSXXXXXXXSYSPIDRAGRRSSETIYEEVDEKGRCPLPPRGSRSSPGKKASRAAADAIGDRCTDGAGCAGGAVGAGEAAAVVAEKPTPCVGVDGSTGWVKELVVG-RLADEAERGS-----GPTRTPSPAKAVQARAASAGEGANAAASGRQCPPAPPRNPSG-GAVVADGAXXXXXXXXXXXXXDTA-RRTPTSLVESSNS-----DNFSDWDRNL---STPAPD-----VDDCADP---PLMGRMPSSLLKGSKMLENEQGGDGDIIGLPDAG-------RKRTGPILFTPVALTKEAMASMVWGSSTASXXXXXXXXXXXXXXSQ---------QPMERGPLP------PRSGSGVLTAAAMAVDGGKVSGVEAPTTAXXXXXXXXXXXTANEGGRLVGESLGPGSSGAVVGAGPGIGELRPLVTAASAGAGAGSIQTMVSRSIYQRRTEEVSYAPGGDHDGRPSLSHRTKSTEDYSVDDDWGADFEGRIVLTPKTGGPGSTWGRDPELLE-GDEDTDGSSAAAAFGSPVRPADTRAPSSHRQ-APSTNNSPDKTP--QAGLF--PAAPKLSARDSFTISDDDSQLAWSAPEFS-SSGRSVGGVAGGVDGCGDGARRRRSGNRGHRRTYAMTNVARIGAEY--VLSTWG-----MGGRDDAPAVASGLQDA--GAHGLTGGGXXXXXXXXXXXPRRWDWEHRRRSKRTRGFQTISKAEYTPMYVSTAWLNPKSNRWEPSDGYAVDMSGFGLD-CGGD----------DDEQDLSDLSGRGWAGAKPVRRELALDLAGTGGAEEGMQHESMR--SLGSRPLLPRDASGTSLTSS--TCAGTPTSQDRLRRKPS-SIEDRLAAFQLRPETLRHMARSDEAHGQAMTRFLGEQGYANAKREGAARLLRLPGVAAVAADGATCGSPKEMR-VKTCTGGGVDSGTGSPDSR 6947
V AS P KG+ SAP+LV TRRSS STVGI DSP ML EGLKTDEE+ R+ AA E G A+ D+ C +VGG T A G A+G EA E GL V A P P + GRA+ EQ GDG +GGS+LD YRE EGNDW ELEDW GLPGLQLA L+ P+LIFR GTVDEGDV SLHGRPRSR PEA SPAK+GSA STA A EQA A + D + + ER V P+M Q IRA GG A D A G GW+ + G+ QPLL+SLADLTTAGL KLL AEGGSKMFFDPDSQRWVGEEVDLSGFEDPNTS S+ S SAAXXXXXXXXXXXXXXXXXXXXX ES RSP + SP P +A+ GGG S R+ NAHRRWSSGEG Y PSSRRPS++ EG + + GGG G +R H RRH+V+ GG + GS DG V +S++S RRA+GR R+RP S VSS G+ SESDTGSV+RL D + +GG WG TARR D +A G + + R DLV GG RLAQVFEGAAYASS+G S SSS R N + PL G SP P W +S P+ G+ +S ASGSE+ ASETSDWDQDADFE LPE+Q+F + LE+P KFGYSPG GG + SP P +W PP P L R TAPA T P L H T WP KA+ A + ++ G H + GT+TD RADSLGSAAEWD TLEG+LD+SLA+R +TPV G S + T+ +G PRP +R + KS P SK EA+ G G KSP S +AWEAFKA+GGG SLPAT+ AA+TATSIAV+HV KRT +RLLLEKGAGAGKRLSGPVQITL+DLQ SPSPD++SLG+G +DA S P A+AAAG RFNR KMCWEAS +GFEEPDLTGF TTD ESES P R SRS XXXXX S SP + G R+S T+ E V+ + R P R S A+ + EK P G G +V G D RG P+R P +A+ A AA A G++AA+ P P P+G G + G A R P SL +S +S D+ SDWDR+L ++P P V+ DP PLM R+ +++L K L+ G + G P G R GP+LFTP L ++AMA+M+ + S +P R P G GV DG G +A T ++ G GS+ G G E R T G I+T +SR IYQR TEEV ADF G IVLTPKTGGPG+ WGR E LE GDE+TDG+ DT S+H+ APST+ S ++ G+F PA P ++AR S + D Q AWSAPE S G VG R TYAMT++ R G+++ +L WG GR+D S +DA G G GG RR + RR KRTRGFQTIS AEYTPMYV TAWL+PKS+RW+P DGYAVDMSGFG + G+ D +++LSD G P AG G +G + R SLG+RP L R AS S++SS T AGTP+SQ+R ++PS EDRLAAFQL P L+H+A+S++AH +AMT FLGE+GYA AKREGAARLLR+PGVAAVAAD + + +K +GGG GS +R
Sbjct: 28 VVASAFPLKGQGSAPSLV--TRRSSGSTVGIADSPQMLPEGLKTDEEE---------------RSGRPAATXXXXXXXXXPKGEGVGPTGASGPVPPDQ-----CRAVGGAATGAAGA---GREALGDNDTPGGLGAEA-------------------EGGLVPVVAAAEP------PVPPK--------FAGRAEAAEQGAGDG---RIGGSLLDTYREPEGNDW-GELEDWHGLPGLQLANAGDKVPT----LKVPSLIFRPGTVDEGDVLSLHGRPRSRNPEASSPAKYGSAEERARLRPSTAADRCTAASPEQAQAEWRDMDDADGDGERGLEVEPRMNQQGVIRATTGGD-----------VADLDGPAGGDG----GWMRRSGSXXXXXXXXXXQPLLVSLADLTTAGLQKLLQAEGGSKMFFDPDSQRWVGEEVDLSGFEDPNTS----------SMGSTSAAXXXXXXXXXXXXXXXXXXXXXXAES--------RSPAADISSPSPLYARGGGG--SMRLPVNAHRRWSSGEGLYRPSSRRPSIVLEGRGEAVG---GGGSGSDGVQRRKELHQRRHSVSVPSRIPLSASGGLRLEGSG-DGEVLRSTSSASENRRANGRGRSRPGSMVSS----GISSESDTGSVVRLSDAAAPGHLRDGG-------RWGSTARRFD-SAFGVASDTSXXXXXXXXXXXXPPLRRKDLVFGGNHQ---RLAQVFEGAAYASSEGHISM---SSSSRRNASPPL----GNSSPPPGVGSLEMLTWATPRPGASPPLGGVGGSSLASGSEIEASETSDWDQDADFEGLPEDQAFKLTLEEPTKFGYSPGVAVAGGSXXXXXXXXXXXXXXIASPIPD-GNWLPP-AAPALLRRQTAPARTPPSSSLGHMNVGGAFTSWPPKATPAHASDEAVAEESGVGAKNRGHQRSGTYTDLRADSLGSAAEWDWTLEGELDLSLAQRSQTPVMVGPSLKKFTVSAGNVSGTVPRPQARRDGKSLPGRVPSKPAEASDCRGGGAAAGATKI----------KSPHSAVRIAWEAFKANGGGD-SLPATLSAAMTATSIAVKHVSKRTRERLLLEKGAGAGKRLSGPVQITLEDLQTSPSPDRVSLGEGGEDAGCAKSISP--GATAAAGARFNRQKMCWEASTTGFEEPDLTGFDTTDSESES-LPRAPRSSRSRXXXXXPSLSPPRKGGSRASMTVDERVESEERGPASARASLQGLDVAAASGXXXXXXXXXXXXXXXXXXXXXXXXGLEIDDEKDWP-----GEDGGATSVVEGSEQGDGGRRGKEWGSDSPSRAAVPVQAL-AGAAGARRGSSAASEVMMSPVPPAAEPAGLGPMRLGGVDEEEKGDGSSRGGGNAGREPPLSLSDSRHSGGDFSDDVSDWDRSLRSLTSPPPGSPDLLVEGAPDPSQVPLMRRLSTAMLIAPKALKGTDEGVDAVTGEPIGGGKVGCLRRPSFGPVLFTPAGLAEQAMATMISCPEDTTAPLPAAGTPGLSPPSXXXXXXXXXXEPSSRHASPRXXXXXXXMGGGVXX-----XDGXSPGGGQAECAGLGPVAAAREETTESK--------TGVGSAAVAAGV-AGREESRRKGTG-----GRSRIRT-ISRRIYQRSTEEVXXXXXXXXXXX--------------------ADFVGGIVLTPKTGGPGTMWGRAQEALEEGDEETDGTDGLD---------DT---SNHQHGAPSTHGSSNRPTLQHEGIFSAPAPPLVAARAS--LDPGDEQSAWSAPELILSDGSDVG-------------ERXXXXXXXXXXTYAMTSMTRFGSKHRLLLKRWGGEKAVASGREDVEWGPSSGEDAADGGDGDRGG---------TPVQRRRGSKLHRRPKRTRGFQTISLAEYTPMYVPTAWLDPKSHRWKPVDGYAVDMSGFGPEGSSGEGXXXXXXXXHDQKKNLSDAVAENLPGNNPPPGADGGRAAGAEG-RQGARGGGGRAESLGARPSLSRGASAVSVSSSVGTWAGTPSSQERGCKRPSRGFEDRLAAFQLGPAALQHLAKSEQAHDEAMTLFLGEKGYARAKREGAARLLRMPGVAAVAADEQEANASLNRKPLKRGSGGGGGPTRGSTSTR 1953
BLAST of mRNA_P-littoralis_Contig681.28.4 vs. uniprot
Match: D7FZY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY2_ECTSI) HSP 1 Score: 862 bits (2227), Expect = 1.310e-260 Identity = 866/2112 (41.00%), Postives = 1031/2112 (48.82%), Query Frame = 3
Query: 1044 MLAEGLKTDEEDYSSHRSGDRGGSGGGRAALEAAVIESAETIDTAPPEMAGQVSANRVSAGDENHLSRCESVGGVTT-RAGSFCLPGSCAVGGGSPVARARGEAASRGQGGGGGDLD---ASEIGSEAGLTAVTATDTPAGTCVATAPGRGGRGGSGDVVGRADM-EQVNGDGGGMILGGSMLDAYRELEGNDWEDELEDWRGLPGLQLAAGSGGCAAMRSRLQSPALIFRSGTVDEGDVASLHGRPRSRKPEAVSPAKHGSAWSHSTAGRTAVADVAEQAPAVGDGNSEAER---------------VGPKMVQPRPIRAAGGGGGFQGFNSPDAGAAKSDSEAAKSGRERGGWI--------GKGGAGGQPLLLSLADLTTAGLDKLLHAEGGSKMFFDPDSQRWVGEEVDLSGFEDPNTSSGFEEPINTCSVLSDSAAXXXXXXXXXXXXXXXXXXXXXSGESTSSNPLQSRSPGR-LGSPLPSHAQAGGGNGSPRVSANAHRRWSSGEGFYGPSSRRPSMLSEGARKVMARSIGGGKG----KRSPRSHLRRHTVA-------GVDGGGGVGGSTWDGGVSCPSSASSVGRRASGRIRTRPDSTVSSVASSGLRSESDTGSVLRLYD-----DYRGEGGDRRQPQDSWGGTARRADVAALGEEGEDATAAGAADKSWAGS-------RNDLVVGGEQLTKSRLAQVFEGAAYASSDGQASRASRSSSMRPNNASPLSRGGGAGSPGPS--WPWIGRSDASSFPVVGME-NSFASGSELGASETSDWDQDADFECLPENQSFNMKLEQPAKFGYSPGAGRFGGGGSGDDSG----SAEMMSPTPGCDDWPPPPVTPGLSRYWTAPASTAP---LQHGEARRC-TMWPMKA------SADSSKTAGGGTKHAHPQ--GTHTDNRADSLGSAAEWDRTLEGDLDVSLARRPRTPVAAGLSFSR-PTIPG--AGAAPRPTSRPERKSSPDLRQSKFVEATGSGRXXXXXXXXXXXXXSALG----KSPRSVAGVAWEAFKAHGGGGGSLPATVKAAVTATSIAVEHVRKRTHKRLLLEKGAGAGKRLSGPVQITLQDLQASPSPDKLSLGDGVDDANDDSSQLPVAAASAAAGVRFNRGKMCWEASQSGFEEPDLTGFATTDDESES-SRPAGSRRSRSXXXXXXXSYSPIDRAGRRSSETIYEEVDEKGRCPLPPRGSRSSPGKKASRAAADAIGDRC--TDGAGC-----AGGAVGAGEAAAVVAEKPTP-------CVGVDGSTGWVKELVVGRLADEAERGSGPTRTPSPAKAVQARAASAGE--GANAAASGRQCPPAPPRNPSG-GAVVADGAXXXXXXXXXXXXXDTA-RRTPTSLVESSNS-----DNFSDWDRNL---STPAPD-----VDDCADP---PLMGRMPSSLLKGSKMLENEQGGDGDIIGLPDAG-------RKRTGPILFTPVALTKEAMASMV------WGSSTASXXXXXXXXXXXXXXSQQPMERGPLPPRSGSGVLTAAAMAVDGGKVSGVEAPTTAXXXXXXXXXXXTANEGGRLVGESLGPGSSGAVVGAGPGIGELRPLVTAASAGAGAGSIQTMVSRSIYQRRTEEVSYAPGGDHDGRPSLSHRTKSTEDYSVDDDWGADFEGRIVLTPKTGGPGSTWGRDPELLE-GDEDTDGSSAAAAFGSPVRPADTRAPSSHRQAPSTNNSPDKTPQAGLFPAAPKLSARDSFTISDDDSQLAWSAPEFSSSGRSVGGVAGGVDGCGDGARRRRSGNRGHRRTYAMTNVARIGAEYVLSTWGMGGRDDAPAVASGLQDAGAHGLTGGGXXXXXXXXXXXPRRWDWEHRRRSKRTRGFQTISKAEYTPMYVSTAWLNPKSNRWEPSDGYAVDMSGF---GLDCGGDDDEQDLSDLSGRGWAGAKP--VRRELALDLA--GTGGAEEGMQHESM-----RSLGSRPLLPRDASGTSLTSS--TCAGTPTSQDRLRRKPS-SIEDRLAAFQLRPETLRHMARSDEAHGQAMTRFLGEQGYANAKREGAARLLRLPGVAAVAADG--ATCGSPKEMRVKTCTGGGVDSGTGSPDSR 6947
ML EGLKTDEED+S G RAA A E + AP +G V ++ A VGG T AG+ G AVG D D SE +E GL V A + V AP GRA+ EQ GDG +GGS+LDAYRE EGNDW ELEDW GLPGLQLA L+ P+LIFR GTVDEGDV SLHGRPRSRKPEA SPAK+GS + +A AD A G ++AER V P+M Q IRA GG A D A SG GW+ QPLLLSLADLTTAGL KLL AEGGSKMFFDPDSQRWVGEEVDLSGFEDPNTS S+ S SA XXXXXXXXXXXXX S S +SRSP + SPLP +A+ GGG S R+ NAHRRWSSGEG YGPSSRRPS++ E + + GGG G +R H RRH+V+ GG + GS DGGV P+S++S RRA GR+R+RP +S+ SSG+ SESDTGSV+RL D R GG WG TARR D +A G + + R DLVVGG+ RLAQVFEGAAYASS+G RAS SSS R N + PL W +S P+ G+ +S ASGSE+ ASETSDWDQDADFE LPE+Q+FN+ LE+P KFGYSPG G ++ + SP P DW PP P L R TAPA T P L H EA T WP KA D ++ +G G K+ Q GT+TD RADSLGSAAEWDRTLEG+LD+SLA+R +TPV G S + P G +G PRP +R KS P SK EA+G A G KSPRS G+AWEAFKA+GGG SLPAT+ AA+TATSIAVEHVRKRT +RLLLEKGAGAGKRLSGPVQITL+DLQ SPSPD++SLG G +DA S P ++AAAG RFNR KMCWE GFEEPDLTGF TTD ESES R GS RSR XXX S P + G R+S T+ E VD + R P S S G + AA+ D T G C +G G E + EK +P VQA A +AGE G++ A+ P P+G G + GA A R P SL +S +S D+ SDWDR+L ++P P V+ DP PLM R+ +++L K L+ G + G P G R GP+LFTP L ++AMA+M+ S A+ + ++ ++ DGG G +A A G + + G GS A G+ I+T +SR IYQR TEE GG++D R S SHRTKSTEDYSVDD WGADF G IVLTPKTGGPG+ WGR + LE GDE+TD D D G+D T + R G E V S GR+DA +S +DA G GG RR + RRR KRTRGFQTIS AEYTPMYV TAWL+PKS+RW+P DGYAVDMSGF G GG + A V R A G G EEG Q + LG+RP L R AS S++SS T AGTP+SQ+R R+PS EDRLAAFQL P +H+A+S++AH +AM FLGEQGYA AKREGAARLLR+PGVAAVAAD A ++ + +GG G GS ++
Sbjct: 197 MLPEGLKTDEEDHS-----------GRRAATAVAAAPKGEGV--APTGASGPVPPDQSRA-----------VGGAATGEAGA----GREAVG----------------------DYDNPGGSEAKAEGGLVTVVAGEE-----VPAAP---------KFAGRAEAAEQGAGDG---RIGGSLLDAYREPEGNDW-GELEDWHGLPGLQLANAGDEVPT----LKVPSLIFRPGTVDEGDVLSLHGRPRSRKPEASSPAKYGSGEERARLCPSAPADTCT---AASPGQTQAERRDMDDEDGDGERGLVVEPRMNQHGVIRATTGGR-----------VADLDGPAGGSG----GWMRXXXXXXXXXXXXXXQPLLLSLADLTTAGLQKLLQAEGGSKMFFDPDSQRWVGEEVDLSGFEDPNTS----------SIGSTSAXXXXXXXXXXXXXXG-------SSNSPHRRGAESRSPAADISSPLPLYARGGGG--SRRLPVNAHRRWSSGEGLYGPSSRRPSIVLEERGETVG---GGGSGSDGVQRRKELHQRRHSVSVPSRIPPSASGGLRLEGSG-DGGVLRPTSSASENRRAKGRVRSRP----ASMVSSGISSESDTGSVVRLSDAAAPGHVRDGGG--------WGNTARRFD-SAFGFASDTSXXXXXXXXXXXXXXXXXXLRRKDLVVGGDHQ---RLAQVFEGAAYASSEG---RASMSSSSRRNASPPLGXXXXXXXXXXXEMLAWATPRAGASPPLGGVGGSSLASGSEIEASETSDWDQDADFEGLPEDQAFNLTLEEPTKFGYSPGLAVAGXXXXXXXXXXXXXASNIASPIPD-GDWLPP-AAPDLLRRQTAPAMTPPSSSLGHVEAGGAFTRWPPKAPPAHASDGDGAEESGDGAKNRGHQRSGTYTDLRADSLGSAAEWDRTLEGELDLSLAQRNQTPVMVGPSLKKFPVAAGNVSGTVPRPKARRGGKSLPGRVPSKPAEASGC-----------RGGGGAAGAIKIKSPRSAVGIAWEAFKANGGGD-SLPATLSAAMTATSIAVEHVRKRTRERLLLEKGAGAGKRLSGPVQITLEDLQTSPSPDRMSLGAGGEDAGSAKSISP--GSTAAAGARFNRRKMCWE----GFEEPDLTGFDTTDSESESLPRAPGSSRSRXXXXSPPLS--PPRKGGSRASMTVEERVDSEERGPA--SSSASLQGLDLAAAASGTADDAVATTGGGDCDTLRPSGDGGGGLE---IDDEKASPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQALAGAAGERRGSSVASEVMVSPVPAAAEPAGLGPMRIGGADEEEKGDGSSRGSGNAGREAPLSLSDSRHSGGDLSDDVSDWDRSLRSLTSPPPGSPDLLVEGAPDPSQVPLMRRLSTAMLMAPKALKGPDEGLDAVAGEPIGGGKAGCLIRPSFGPVLFTPAGLAEQAMATMISCPEDTTASPPAAGAPGLSPPSEAAAAEXXXXXXXXXXXXXXATEMSGGVVSADGGSPGGGQAECAGLGPV-------AAAAAGETMESTTGVGSXXXXX-----XXXXXXXXXXRKATGGSTRIRT-ISRRIYQRSTEEGPAPEGGENDARTSASHRTKSTEDYSVDD-WGADFVGGIVLTPKTGGPGTMWGRAQDALEEGDEETD---------------------------------------------------------DTD----------------------GLD-----------------ETRTLLLKRRGGDEAVAS-----GREDAGWGSSSGEDAADGGDGDGGETPVQ-------RRRGSKLRRRPKRTRGFQTISLAEYTPMYVPTAWLDPKSHRWKPVDGYAVDMSGFDPDGSSGGGXXXXXXXXXXXXXXLSNAVAGNVSRNNPPPGAEGGRAGGEEGRQGARVGGGRAEGLGARPSLSRGASAVSVSSSAGTWAGTPSSQERGCRRPSRGFEDRLAAFQLGPAARQHLAKSEQAHDEAMALFLGEQGYARAKREGAARLLRMPGVAAVAADEEEANASLNRKPLKRGSSGGXXXPGKGSTSTK 2027
BLAST of mRNA_P-littoralis_Contig681.28.4 vs. uniprot
Match: A0A836CHZ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ5_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.430e-5 Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 3
Query: 2073 QPLLLSLADLTTAGLDKLLHAEGGSKMFFDPDSQRWVG---EEVDLSGFEDPNTSSGFEE 2243
+P+L+SLAD+T AGL+KLL A G ++M+FD +QRWVG + VD+SGFE +T++ E
Sbjct: 408 EPILVSLADVTAAGLEKLLEAGGDTQMYFDSVAQRWVGGAADRVDMSGFERGSTAASLAE 467 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig681.28.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig681.28.4 >prot_P-littoralis_Contig681.28.4 ID=prot_P-littoralis_Contig681.28.4|Name=mRNA_P-littoralis_Contig681.28.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2819bp MDDSLSELACVQVIDATGHLSAKGRAHRRSHSAPLGRAPSTTSPIPPHRQback to top mRNA from alignment at P-littoralis_Contig681:81670..107338- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig681.28.4 ID=mRNA_P-littoralis_Contig681.28.4|Name=mRNA_P-littoralis_Contig681.28.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=25669bp|location=Sequence derived from alignment at P-littoralis_Contig681:81670..107338- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig681:81670..107338- >mRNA_P-littoralis_Contig681.28.4 ID=mRNA_P-littoralis_Contig681.28.4|Name=mRNA_P-littoralis_Contig681.28.4|organism=Pylaiella littoralis U1_48|type=CDS|length=8457bp|location=Sequence derived from alignment at P-littoralis_Contig681:81670..107338- (Pylaiella littoralis U1_48)back to top |